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The soil physics contributions of Edgar Buckingham

During 1902 to 1906 as a soil physicist at the USDA Bureau of Soils (BOS), Edgar Buckingham originated the concepts of matric potential, soil–water retention curves, specific water capacity, and unsaturated hydraulic conductivity ( K ) as a distinct property of a soil. He applied a formula equivalent to Darcy's law (though without specific mention of Darcy's work) to unsaturated flow. He also contributed significant research on quasi-empirical formulas for K as a function of water content, water flow in capillary crevices and in thin films, and scaling. Buckingham's work on gas flow in soils produced paradigms that are consistent with our current understanding. His work on evaporation elucidated the concept of self-mulching and produced sound and sometimes paradoxical generalizations concerning conditions that favor or retard evaporation. Largely overshadowing those achievements, however, is that he launched a theory, still accepted today, that could predict transient water content as a function of time and space. Recently discovered documents reveal some of the arguments Buckingham had with BOS officials, including the text of a two-paragraph conclusion of his famous 1907 report on soil water, and the official letter documenting rejection of that text. Strained interpersonal relations motivated the departure of Buckingham and other brilliant physicists (N.E. Dorsey, F.H. King, and Lyman Briggs) from the BOS during 1903 to 1906. Given that Buckingham and his BOS colleagues had been rapidly developing the means of quantifying unsaturated flow, these strained relations probably slowed the advancement of unsaturated flow theory.

Soil Science Society of America Journal↗

Meeting ecological and societal needs for freshwater

Human society has used freshwater from rivers, lakes, groundwater, and wetlands for many different urban, agricultural, and industrial activities, but in doing so has overlooked its value in supporting ecosystems. Freshwater is vital to human life and societal well-being, and thus its utilization for consumption, irrigation, and transport has long taken precedence over other commodities and services provided by freshwater ecosystems. However, there is growing recognition that functionally intact and biologically complex aquatic ecosystems provide many economically valuable services and long-term benefits to society. The short-term benefits include ecosystem goods and services, such as food supply, flood control, purification of human and industrial wastes, and habitat for plant and animal life—and these are costly, if not impossible, to replace. Long-term benefits include the sustained provision of those goods and services, as well as the adaptive capacity of aquatic ecosystems to respond to future environmental alterations, such as climate change. Thus, maintenance of the processes and properties that support freshwater ecosystem integrity should be included in debates over sustainable water resource allocation. The purpose of this report is to explain how the integrity of freshwater ecosystems depends upon adequate quantity, quality, timing, and temporal variability of water flow. Defining these requirements in a comprehensive but general manner provides a better foundation for their inclusion in current and future debates about allocation of water resources. In this way the needs of freshwater ecosystems can be legitimately recognized and addressed. We also recommend ways in which freshwater ecosystems can be protected, maintained, and restored. Freshwater ecosystem structure and function are tightly linked to the watershed or catchment of which they are a part. Because riverine networks, lakes, wetlands, and their connecting groundwaters, are literally the “sinks” into which landscapes drain, they are greatly influenced by terrestrial processes, including many human uses or modifications of land and water. Freshwater ecosystems, whether lakes, wetlands, or rivers, have specific requirements in terms of quantity, quality, and seasonality of their water supplies. Sustainability normally requires these systems to fluctuate within a natural range of variation. Flow regime, sediment and organic matter inputs, thermal and light characteristics, chemical and nutrient characteristics, and biotic assemblages are fundamental defining attributes of freshwater ecosystems. These attributes impart relatively unique characteristics of productivity and biodiversity to each ecosystem. The natural range of variation in each of these attributes is critical to maintaining the integrity and dynamic potential of aquatic ecosystems; therefore, management should allow for dynamic change. Piecemeal approaches cannot solve the problems confronting freshwater ecosystems. Scientific definitions of the requirements to protect and maintain aquatic ecosystems are necessary but insufficient for establishing the appropriate distribution between societal and ecosystem water needs. For scientific knowledge to be implemented science must be connected to a political agenda for sustainable development. We offer these recommendations as a beginning to redress how water is viewed and managed in the United States: (1) Frame national and regional water management policies to explicitly incorporate freshwater ecosystem needs, particularly those related to naturally variable flow regimes and to the linking of water quality with water quantity; (2) Define water resources to include watersheds, so that freshwaters are viewed within a landscape, or systems context; (3) Increase communication and education across disciplines, especially among engineers, hydrologists, economists, and ecologists to facilitate an integrated view of freshwater resources; (4) Increase restoration efforts, using well-grounded ecological principles as guidelines; (5) Maintain and protect the remaining freshwater ecosystems that have high integrity; and (6) Recognize the dependence of human society on naturally functioning ecosystems.

Ecological Applications↗

Assessment of lunar resource exploration in 2022

The idea of mining the Moon, once purely science-fiction, is now on the verge of becoming reality. Taking advantage of the resources on the Moon is part of the plans of many nations and some enterprising commercial entities; demonstrating in-situ (in place) resource utilization near the lunar south pole is an explicit goal of the United States’ Artemis program. Economic extraction and sustainable management of these resources require understanding the nature, quantity, and quality of each resource. This publication aims to provide a relatively simple, but technically rigorous, assessment of the status of lunar resource exploration in 2022. Building on the experience of the U.S. Geological Survey in conducting resource assessments for Earth, we propose a general methodology for quantitative lunar resources assessments. Lunar resources can be categorized as energy, mineral, and water and classified with respect to their certainty and their recoverability. The portion of the technically recoverable resource that can be converted to a commodity within budgetary and other mission constraints can be classified as a “reserve.” For energy resources, solar energy is known to be especially abundant along some high ridges near the lunar poles and the technology to exploit it is mature. Mineral resources, largely in the form of loose rock powder that covers the surface of the Moon, are also widely accessible in large quantities. Many different technologies to convert this material into useful commodities (such as landing pads and oxygen) are currently being developed and are likely to be available for industrial-scale application within 30 years. Water ice almost certainly exists in the polar regions of the Moon but there are fundamental unanswered questions about when and how the ice formed—leaving us without knowledge of the form, quantity, quality, and distribution of lunar ice. Until rover missions bring new ground truth data, lunar ice will remain a highly speculative resource that may be both limited and non-renewable.

Circular↗

Modeling framework to estimate spawning and hatching locations of pelagically-spawned eggs

Identifying spawning and hatching locations is vital to controlling invasive fish and conserving imperiled fish, which can be difficult for pelagically-spawning species with semi-buoyant eggs. In freshwater systems, this reproductive strategy is common among cyprinid species, such as Chinese carp species currently threatening the Great Lakes. Following the confirmation that one of these species, Grass Carp (Ctenopharyngodon idella), was spawning in a Great Lakes tributary, we developed a modeling framework to combine field data with hydraulic models to calculate the most probable spawning and hatching locations for collected eggs. Our results indicate that the estimated spawning location encompassed habitat consistent with spawning sites in Grass Carp’s native range. Additionally, all eggs were identified to have hatched in the river, increasing the likelihood of successful recruitment. This modeling framework can be used to estimate spawning and hatching locations for Chinese carp species, as well as all pelagic, riverine spawners. Spawning and hatching locations provide key information to researchers about the reproductive requirements of species and to agencies about how best to manage populations for control or restoration.

Canadian Journal of Fisheries and Aquatic Sciences↗

Stream fish occurrence in response to impervious cover, historic land use, and hydrogeomorphic factors

We evaluated competing models explaining the occurrence of five stream fishes in an urbanizing watershed to determine the relative importance of ( a ) impervious surface and other indicators of current land use, ( b ) historic land use (e.g., agriculture, impoundments), and ( c ) hydrogeomorphic characteristics (e.g., stream size, elevation, geology). For four of five species, the best-supported models were those that included both current effective impervious cover and historic land use predictor variables, although models with only effective impervious cover were equally well supported for two of those species. For the best-supported models for three species, occurrence probability was predicted to approach zero at levels of development equivalent to about 2%–4% effective impervious cover in the surrounding region. Data were drawn from 357 fish collections made in the Etowah River basin, Georgia, USA, between 1998 and 2003 and analyzed using hierarchical logistic regression accounting for imperfect species detection. This is the first study we know of to examine the response of individual fish species to both increasing impervious cover and historic land use. Such individual species assessments will be increasingly necessary to guide policies for managing urban effects and preventing extirpations of sensitive species.

Canadian Journal of Fisheries and Aquatic Sciences↗

A synthesis of Martian aqueous mineralogy after 1 Mars year of observations from the Mars Reconnaissance Orbiter

Martian aqueous mineral deposits have been examined and characterized using data acquired during Mars Reconnaissance Orbiter's (MRO) primary science phase, including Compact Reconnaissance Imaging Spectrometer for Mars hyperspectral images covering the 0.4-3.9 ??m wavelength range, coordinated with higher-spatial resolution HiRISE and Context Imager images. MRO's new high-resolution measurements, combined with earlier data from Thermal Emission Spectrometer; Thermal Emission Imaging System; and Observatoire pour la Min??ralogie, L'Eau, les Glaces et l'Activiti?? on Mars Express, indicate that aqueous minerals are both diverse and widespread on the Martian surface. The aqueous minerals occur in 9-10 classes of deposits characterized by distinct mineral assemblages, morphologies, and geologic settings. Phyllosilicates occur in several settings: in compositionally layered blankets hundreds of meters thick, superposed on eroded Noachian terrains; in lower layers of intracrater depositional fans; in layers with potential chlorides in sediments on intercrater plains; and as thousands of deep exposures in craters and escarpments. Carbonate-bearing rocks form a thin unit surrounding the Isidis basin. Hydrated silica occurs with hydrated sulfates in thin stratified deposits surrounding Valles Marineris. Hydrated sulfates also occur together with crystalline ferric minerals in thick, layered deposits in Terra Meridiani and in Valles Marineris and together with kaolinite in deposits that partially infill some highland craters. In this paper we describe each of the classes of deposits, review hypotheses for their origins, identify new questions posed by existing measurements, and consider their implications for ancient habitable environments. On the basis of current data, two to five classes of Noachian-aged deposits containing phyllosilicates and carbonates may have formed in aqueous environments with pH and water activities suitable for life. Copyright 2009 by the American Geophysical Union.

Journal of Geophysical Research E: Planets↗

Heat as a tracer to determine streambed water exchanges

This work reviews the use of heat as a tracer of shallow groundwater movement and describes current temperature-based approaches for estimating streambed water exchanges. Four common hydrologic conditions in stream channels are graphically depicted with the expected underlying streambed thermal responses, and techniques are discussed for installing and monitoring temperature and stage equipment for a range of hydrological environments. These techniques are divided into direct-measurement techniques in streams and streambeds, groundwater techniques relying on traditional observation wells, and remote sensing and other large-scale advanced temperature-acquisition techniques. A review of relevant literature suggests researchers often graphically visualize temperature data to enhance conceptual models of heat and water flow in the near-stream environment and to determine site-specific approaches of data analysis. Common visualizations of stream and streambed temperature patterns include thermographs, temperature envelopes, and one-, two-, and three-dimensional temperature contour plots. Heat and water transport governing equations are presented for the case of transport in streambeds, followed by methods of streambed data analysis, including simple heat-pulse arrival time and heat-loss procedures, analytical and time series solutions, and heat and water transport simulation models. A series of applications of these methods are presented for a variety of stream settings ranging from arid to continental climates. Progressive successes to quantify both streambed fluxes and the spatial extent of streambeds indicate heat-tracing tools help define the streambed as a spatially distinct field (analogous to soil science), rather than simply the lower boundary in stream research or an amorphous zone beneath the stream channel.

Water Resources Research↗

The FORE-SCE model: a practical approach for projecting land cover change using scenario-based modeling

A wide variety of ecological applications require spatially explicit, historic, current, and projected land use and land cover data. The U.S. Land Cover Trends project is analyzing contemporary (1973–2000) land-cover change in the conterminous United States. The newly developed FORE-SCE model used Land Cover Trends data and theoretical, statistical, and deterministic modeling techniques to project future land cover change through 2020 for multiple plausible scenarios. Projected proportions of future land use were initially developed, and then sited on the lands with the highest potential for supporting that land use and land cover using a statistically based stochastic allocation procedure. Three scenarios of 2020 land cover were mapped for the western Great Plains in the US. The model provided realistic, high-resolution, scenario-based land-cover products suitable for multiple applications, including studies of climate and weather variability, carbon dynamics, and regional hydrology.

Journal of Land Use Science↗

The ecology and evolution of synchronized reproduction in long-lived plants

Populations of many long-lived plants exhibit spatially synchronized seed production that varies extensively over time, so that seed production in some years is much higher than on average, while in others, it is much lower or absent. This phenomenon termed masting or mast seeding has important consequences for plant reproductive success, ecosystem dynamics and plant–human interactions. Inspired by recent advances in the field, this special issue presents a series of articles that advance the current understanding of the ecology and evolution of masting. To provide a broad overview, we reflect on the state-of-the-art of masting research in terms of underlying proximate mechanisms, ontogeny, adaptations, phylogeny and applications to conservation. While the mechanistic drivers and fitness consequences of masting have received most attention, the evolutionary history, ontogenetic trajectory and applications to plant–human interactions are poorly understood. With increased availability of long-term datasets across broader geographical and taxonomic scales, as well as advances in molecular approaches, we expect that many mysteries of masting will be solved soon. The increased understanding of this global phenomenon will provide the foundation for predictive modelling of seed crops, which will improve our ability to manage forests and agricultural fruit and nut crops in the Anthropocene.

Philosophical Transactions of the Royal Society B:↗

Sources and sinks of carbon in boreal ecosystems of interior Alaska: a review

Boreal regions store large quantities of carbon but are increasingly vulnerable to carbon loss due to disturbance and climate warming. The boreal region, underlain by discontinuous permafrost, presents a challenging landscape for itemizing current and potential carbon sources and sinks in the boreal soil and vegetation. The roles of fire, forest succession, and the presence (or absence) of permafrost on carbon cycle, vegetation, and hydrologic processes have been the focus of multidisciplinary research in this area for the past 20 years. However, projections of a warming future climate, an increase in fire severity and extent, and the potential degradation of permafrost could lead to major landscape process changes over the next 20 to 50 years. This provides a major challenge for predicting how the interplay between land management activities and impacts of climate warming will affect carbon sources and sinks in Interior Alaska. To assist land managers in adapting and managing for potential changes in the Interior Alaska carbon cycle we developed this review paper incorporating an overview of the climate, ecosystem processes, vegetation types, and soil regimes in Interior Alaska with a focus on ramifications for the carbon cycle. Our objective is to provide a synthesis of the most current carbon storage estimates and measurements to support policy and land management decisions on how to best manage carbon sources and sinks in Interior Alaska. To support this we have surveyed relevant peer reviewed estimates of carbon stocks in aboveground and belowground biomass for Interior Alaska boreal ecosystems. We have also summarized methane and carbon dioxide fluxes from the same ecosystems. These data have been converted into the same units to facilitate comparison across ecosystem compartments. We identify potential changes in the carbon cycle with climate change and human disturbance including how compounding disturbances can affect the boreal system. Finally, we provide recommendations to address the challenges facing land managers in efforts to manage carbon cycle processes. The results of this study can be used for carbon cycle management in other locations within the boreal biome which encompass a broad distribution from 45° to 83° north.

Alaska↗

Modeling sediment bypassing around idealized rocky headlands

Alongshore sediment bypassing rocky headlands remains understudied despite the importance of characterizing littoral processes for erosion abatement, beach management, and climate change adaptation. To address this gap, a numerical model sediment transport study was developed to identify controlling factors and mechanisms for sediment headland bypassing potential. Four idealized headlands were designed to investigate sediment flux around the headlands using the process-based hydrodynamic model Delft-3D and spectral wave model SWAN. The 120 simulations explored morphologies, substrate compositions, sediment grain sizes, and physical forcings (i.e., tides, currents, and waves) commonly observed in natural settings. A generalized analytical framework based on flow disruption and sediment volume was used to refine which factors and conditions were more useful to address sediment bypassing. A bypassing parameter was developed for alongshore sediment flux between upstream and downstream cross-shore transects to determine the degree of blockage by a headland. The shape of the headland heavily influenced the fate of the sediment by changing the local angle between the shore and the incident waves, with oblique large waves generating the most flux. All headlands may allow sediment flux, although larger ones blocked sediment more effectively, promoting their ability to be littoral cell boundaries. The controlling factors on sediment bypassing were determined to be wave angle, size, and shape of the headland, and sediment grain size.

Journal of Marine Science and Engineering↗

Ecological and socioeconomic factors associated with the human burden of environmentally mediated pathogens: A global analysis

Background Billions of people living in poverty are at risk of environmentally mediated infectious diseases—that is, pathogens with environmental reservoirs that affect disease persistence and control and where environmental control of pathogens can reduce human risk. The complex ecology of these diseases creates a global health problem not easily solved with medical treatment alone. Methods We quantified the current global disease burden caused by environmentally mediated infectious diseases and used a structural equation model to explore environmental and socioeconomic factors associated with the human burden of environmentally mediated pathogens across all countries. Findings We found that around 80% (455 of 560) of WHO-tracked pathogen species known to infect humans are environmentally mediated, causing about 40% (129 488 of 359 341 disability-adjusted life years) of contemporary infectious disease burden (global loss of 130 million years of healthy life annually). The majority of this environmentally mediated disease burden occurs in tropical countries, and the poorest countries carry the highest burdens across all latitudes. We found weak associations between disease burden and biodiversity or agricultural land use at the global scale. In contrast, the proportion of people with rural poor livelihoods in a country was a strong proximate indicator of environmentally mediated infectious disease burden. Political stability and wealth were associated with improved sanitation, better health care, and lower proportions of rural poverty, indirectly resulting in lower burdens of environmentally mediated infections. Rarely, environmentally mediated pathogens can evolve into global pandemics (eg, HIV, COVID-19) affecting even the wealthiest communities. Interpretation The high and uneven burden of environmentally mediated infections highlights the need for innovative social and ecological interventions to complement biomedical advances in the pursuit of global health and sustainability goals. Funding Bill & Melinda Gates Foundation, National Institutes of Health, National Science Foundation, Alfred P. Sloan Foundation, National Institute for Mathematical and Biological Synthesis, Stanford University, and the US Defense Advanced Research Projects Agency.

The Lancet Planetary Health↗

Quantifying resilience

The biosphere is under unprecedented pressure, reflected in rapid changes in our global ecological, social, technological and economic systems. In many cases, ecological and social systems can adapt to these changes over time, but when a critical threshold is surpassed, a system under stress can undergo catastrophic change and reorganize into a different state. The concept of resilience, introduced more than 40 years ago in the ecological sciences, captures the behaviour of systems that can occur in alternative states. The original definition of resilience forwarded by Holling ( 1973 ) is still the most useful. It defines resilience as the amount of disturbance that a system can withstand before it shifts into an alternative stable state. The idea of alternative stable states has clear and profound implications for ecological management. Coral reefs, for example, are high-diversity systems that provide key ecosystem services such as fisheries and coastal protection. Human impacts are causing significant, ongoing reef degradation, and many reefs have shifted from coral- to algal-dominated states in response to anthropogenic pressures such as elevated water temperatures and overfishing. Understanding and differentiating between the factors that help maintain reefs in coral-dominated states vs. those that facilitate a shift to an undesired algal-dominated state is a critical step towards sound management and conservation of these, and other, important social–ecological systems. Resilience has gained popularity among both academicians and laypeople, as a term meant to describe a systems’ ability to withstand disturbance. Resilience has become a buzzword in the last decade, as shown by its increasing appearance in calls for research proposals and scientific citation data bases. The term resilience has in many cases lost the clarity of the original definition and in fact is frequently used in a manner in direct opposition to the original definition. Many current uses of the concept are loose and incorrect. The term is becoming increasingly used in a normative sense (Brand & Jax 2007 ), as if resilience were a desirable quality of systems. However, even systems in highly undesirable states, such as macro-algae dominated reefs, or city cores in poverty traps, may be highly resilient, which is to say they withstand attempts to transform them into different (desirable) states. Operationalizing the concept of resilience for application and management has been difficult. Misuse of the term can have significant negative impacts, because resilience is being used to help guide responses to natural disasters and to assess the sustainability of ecosystems and urban systems and has been driving international research priorities. Resilience has been argued to be a basic emergent property of systems, a process or a rate. We focus on the original concept as described by Holling, which is that of an emergent system property; when a system is in a desirable state and managers wish to enhance resilience, or when the system is in an undesirable state and managers wish to erode resilience and foster a transformation to an alternative state. Fostering or eroding resilience is a process. When a system is perturbed but resilience is not exceeded, then the recovery can be measured as a rate. Several frameworks to operationalize resilience have been proposed. A decade ago, a special feature focused on quantifying resilience was published in the journal Ecosystems (Carpenter, Westley & Turner 2005 ). The approach there was towards identifying surrogates of resilience, but few of the papers proposed quantifiable metrics. Consequently, many ecological resilience frameworks remain vague and difficult to quantify, a problem that this special feature aims to address. However, considerable progress has been made during the last decade (e.g. Pope, Allen & Angeler 2014 ). Although some argue that resilience is best kept as an unquantifiable, vague concept (Quinlan et al . 2016 ), to be useful for managers, there must be concrete guidance regarding how and what to manage and how to measure success (Garmestani, Allen & Benson 2013 ; Spears et al . 2015 ). Ideas such as ‘resilience thinking’ have utility in helping stakeholders conceptualize their systems, but provide little guidance on how to make resilience useful for ecosystem management, other than suggesting an ambiguous, Goldilocks approach of being just right (e.g. diverse, but not too diverse; connected, but not too connected). Here, we clarify some prominent resilience terms and concepts, introduce and synthesize the papers in this special feature on quantifying resilience and identify core unanswered questions related to resilience.

Journal of Applied Ecology↗

Research to improve ShakeAlert earthquake early warning products and their utility

Earthquake early warning (EEW) is the rapid detection of an earthquake and issuance of an alert or notification to people and vulnerable systems likely to experience potentially damaging ground shaking. The level of ground shaking that is considered damaging is defined by the specific application; for example, manufacturing equipment may experience damage at a lower intensity ground shaking than would cause damage to a building. Along the West Coast of the United States, the warning times for ground shaking could range as high as tens of seconds for moderate levels of ground shaking, or potentially longer, if a lower ground-shaking threshold is used to issue alerts. However, it is not always possible to provide advance warning of ground shaking, particularly for locations close to an earthquake that are most likely to experience very strong ground shaking. EEW alerts may be useful to individuals who can use a few seconds to move to a safe zone and to electromechanical systems that can take automatic actions to reduce damage and injuries. An EEW system, ShakeAlert, has been under development in the United States since 2006. Federal and State governments, as well as the private sector, are now investing in the ShakeAlert prototype system that will, when completed, become an operational public system for the West Coast of the United States. While the current prototype is delivering alerts to test users, improvements to the accuracy, timeliness, and utility of the alerts are needed. For this reason, it is essential that the ShakeAlert system be continuously improved through targeted research, involving not only the current ShakeAlert partner organizations, but also the broader scientific, engineering, and emergencyresponse communities. To this end, this report describes the opportunities for improvement that can be addressed through research and development over the next 5 years. Our recommendations are organized into four areas: (1) understand EEW capabilities and user needs, (2) make alerts as fast and accurate as possible, (3) ensure reliability when it counts, and (4) explore the use of new instrumentation. The first challenge is to understand EEW capabilities and user needs. EEW must deliver actionable information to people and to automated systems to mitigate short- and longterm impacts of damaging ground shaking, so development of EEW must be motivated by the needs of users. Within this challenge, we must study the technical capabilities and limitations of EEW in general, and the ShakeAlert system specifically. This includes development of performance metrics that assess the timeliness and accuracy of alerts to understand the value and utility of the ShakeAlert EEW product(s) for various user groups, including different industry sectors, emergency-management agencies, and the public. Research is needed to define the alerting choices that maximize the utility of the system for users and to determine what the available communication pathways are for providing timely alert information. Additionally, we engage users to assess how alerts will be used by different sectors to mitigate losses and to inform EEW product design. Further, social-science research is needed to develop alert messaging, including what relevant prior and follow-up information are required, to ensure effective use of alerts. The second challenge is to make alerts as fast and as accurate as possible. The timeliness and accuracy of an EEW alert is important because it will set in motion a series of actions and downstream products. An EEW alert will trigger notification across emergency-alert systems and across multiple communication channels to populations in impacted regions. The EEW alert region may grow as the earthquake fault-rupture length increases, and the EEW system’s characterization of it, evolves. We must continue research into new or improved seismic and geodetic waveform-processing methods necessary to rapidly characterize the expected ground shaking and associated uncertainties. It is important to thoroughly evaluate whether new methods improve alerts through more accurate ground-motion estimates and (or) reduced latencies (that is, longer warning times). New methods could include tracking the extent of a large rupture in real time (known as finite-fault algorithms) and ground-motionbased EEW algorithms. Additionally, ground motion predictions could be optimized for each earthquake as the earthquake fault rupture progresses by using, for example, event terms to shift ground-motion curves for more (or less) energetic ruptures. The third challenge is to ensure reliability when it counts. This challenge requires us to explore approaches that assess the expected performance of ShakeAlert across the range of earthquake magnitudes, locations, and depths that may occur within the alerting region. Large, damaging earthquakes and their associated aftershock sequences matter most for hazard and for EEW, but these large-earthquake sequences occur infrequently. We expect ShakeAlert to respond robustly to these large-earthquake sequences despite potentially long periods of relative seismic quiescence in the intervening years, and in spite of inevitable communication challenges that arise during and after a large earthquake. We must develop methods to utilize the broadest available datasets to test EEW performance, including ground-motion data recorded in other parts of the world. The observational period for large, damaging earthquakes in any particular region has been short in comparison to estimated large-earthquake recurrence times. Ground-motion records for very large, damaging western United States events and major aftershock sequences do not yet exist, nor do data exist for all potential sources of noise and spurious signals that ShakeAlert must be “tuned” to reject. In addition, robust synthetic data could provide the flexibility to test a wider range of earthquake magnitude, tectonic-setting, and noise scenarios than are covered by existing observational data. Synthetic ground-motion data must be thoroughly vetted against records of smaller magnitude earthquakes to ensure that they accurately capture both the onset and the amplitude of the ground shaking. The final challenge is to explore the use of new instrumentation. The development of EEW around the world to date has focused on the use of high-quality, scientific-grade seismic and geodetic instrumentation. The use of additional types of instrumentation or information may also improve EEW products by filling gaps in sensor coverage in countries that already have dense seismic networks or enable EEW in countries without such networks. We must keep up with these developments and continuously assess their value in supplementing existing EEW systems, such as ShakeAlert, or enabling EEW where such systems do not exist. Such developments include low-cost instrumentation with microelectromechanical system (MEMS) sensors and global positioning system (GPS)/global navigation satellite system (GNSS) antennas embedded in low-cost consumer electronics, sea-floor seismometers, geodetic instrumentation deployed along the Cascadia and Alaska megathrust margins of western North America, and borehole strainmeters that are already deployed across the region.

Open-File Report↗

Science support for evaluating natural recovery of polychlorinated biphenyl concentrations in fish from Crab Orchard Lake, Crab Orchard National Wildlife Refuge, Illinois

Introduction Crab Orchard Lake in southern Illinois is one of the largest and most popular recreational lakes in the state. Construction of the nearly 7,000-acre reservoir in the late 1930s created employment opportunities through the Works Progress Administration, and the lake itself was intended to supply water, control flooding, and provide recreational opportunities for local communities (Stall, 1954). In 1942, the Department of War appropriated or purchased more than 20,000 acres of land around Crab Orchard Lake and constructed the Illinois Ordnance Plant, which manufactured bombs and anti-tank mines during World War II. After the war, an Act of Congress transferred the property to the U.S. Department of the Interior. Crab Orchard National Wildlife Refuge was established on August 5, 1947, for the joint purposes of wildlife conservation, agriculture, recreation, and industry. Production of explosives continued, but new industries also moved onsite. More than 200 tenants have held leases with Crab Orchard National Wildlife Refuge and have operated a variety of manufacturing plants (electrical components, plated metal parts, ink, machined parts, painted products, and boats) on-site. Soils, water, and sediments in several areas of the refuge were contaminated with hazardous substances from handling and disposal methods that are no longer acceptable environmental practice (for example, direct discharge to surface water, use of unlined landfills). Polychlorinated biphenyl (PCB) contamination at the refuge was identified in the 1970s, and a PCB-based fish-consumption advisory has been in effect since 1988 for Crab Orchard Lake. The present advisory covers common carp ( Cyprinus carpio ) and channel catfish ( Ictalurus punctatus ); see Illinois Department of Public Health (2017). Some of the most contaminated areas of the refuge were actively remediated, and natural ecosystem recovery processes are expected to further reduce residual PCB concentrations in the lake. The U.S. Fish and Wildlife Service sought technical support to understand environmental drivers of current (2017) PCB residues in fish tissue and patterns in PCB residues through time to inform the fish-consumption advisory for Crab Orchard Lake. This project is planned in two phases (Tasks 1 and 2); the first phase is included in this report. Task 1, reported here, includes a review of existing literature and a brief overview focused on environmental and biochemical/physiological processes that drive PCB residues in fish tissue. This review specifically targets processes that are relevant for freshwater lacustrine environments such as those at Crab Orchard Lake. In addition to discussions of environmental fate, metabolism, and accumulation of PCBs, this review includes a brief scientifically based explanation of approaches used to establish fish-consumption advisories. A planned second task (Task 2) will include a compilation and summary of existing data on PCB residues in fish tissue samples from Crab Orchard Lake. This summary will also place Crab Orchard Lake data in a broader geographic context through a comparison with fish data from other Midwestern lakes. When Task 1 and Task 2 are complete, resource managers will have (a) a synthesis of existing literature that characterizes the processes influencing the fate of residual PCBs remaining in systems such as Crab Orchard Lake, (b) a summary of natural PCB attenuation processes for use in risk communication with the public, and (c) a summary of existing data on PCBs in fish tissues from Crab Orchard Lake, including exploratory plots of tissue residues through time. Overall, this project will provide data to help resource managers better understand the ecological and public health consequences of residual PCBs in Crab Orchard Lake.

Illinois↗

Coastal strategies to predict Escherichia coli concentrations for beaches along a 35 km stretch of southern Lake Michigan

To understand the fate and movement of Escherichia coli in beach water, numerous modeling studies have been undertaken including mechanistic predictions of currents and plumes and empirical modeling based on hydrometeorological variables. Most approaches are limited in scope by nearshore currents or physical obstacles and data limitations; few examine the issue from a larger spatial scale. Given the similarities between variables typically included in these models, we attempted to take a broader view of E. coli fluctuations by simultaneously examining twelve beaches along 35 km of Indiana's Lake Michigan coastline that includes five point-source outfalls. The beaches had similar E. coli fluctuations, and a best-fit empirical model included two variables: wave height and an interactive term comprised of wind direction and creek turbidity. Individual beach R2 was 0.32-0.50. Data training-set results were comparable to validation results (R2 = 0.48). Amount of variation explained by the model was similar to previous reports for individual beaches. By extending the modeling approach to include more coastline distance, broader-scale spatial and temporal changes in bacteria concentrations and the influencing factors can be characterized. ?? 2008 American Chemical Society.

Environmental Science & Technology↗

Cartography for lunar exploration: 2008 status and mission plans

The initial spacecraft exploration of the Moon in the 1960s-70s yielded extensive data, primarily in the form of film and television images, which were used to produce a large number of hardcopy maps by conventional techniques. A second era of exploration, beginning in the early 1990s, has produced digital data including global multispectral imagery and altimetry, from which a new generation of digital map products tied to a rapidly evolving global control network has been made. Efforts are also underway to scan the earlier hardcopy maps for online distribution and to digitize the film images so that modern processing techniques can be used to make high-resolution digital terrain models (DTMs) and image mosaics consistent with the current global control. The pace of lunar exploration is accelerating dramatically, with as many as eight new missions already launched or planned for the current decade. These missions, of which the most important for cartography are SMART-1 (Europe), Kaguya/SELENE (Japan), Chang'e-1 (China), Chandrayaan-1 (India), and Lunar Reconnaissance Orbiter (USA), will return a volume of data exceeding that of all previous lunar and planetary missions combined. Framing and scanner camera images, including multispectral and stereo data, hyperspectral images, synthetic aperture radar (SAR) images, and laser altimetry will all be collected, including, in most cases, multiple data sets of each type. Substantial advances in international standardization and cooperation, development of new and more efficient data processing methods, and availability of resources for processing and archiving will all be needed if the next generation of missions are to fulfill their potential for high-precision mapping of the Moon in support of subsequent exploration and scientific investigation.

The International Archives of the Photogrammetry, ↗

Hydratools manual version 1.0, documentation for a MATLAB ® -based post-processing package for the Sontek Hydra

The Sediment Transport Instrumentation Group (STG) at the U.S. Geological Survey (USGS) Woods Hole Science Center has a long-standing comitment to providing scientists with high quality oceanographic data. To meet this commitment, STG personnel are vigilant in checking data as well as hardware for signs of instrument malfunction. STG data sets are accompanied by processing histories to detail data processing procedures that may have modified the natural data signal while removing noise from the data. The history also allows the data to be reprocessed in the ligth of new insight into instrument function and moored conditions. This toolbox was compiled to meet these data quality commitments for data generated by Sontek Hydra systems using both ADV and PCADP probes. In the mid 1900's, the USGS Coastal and Marine Program began frequent deployments of Sontek Hydra systems in support of projects in estuaries, coastal, and continental shelf regions nationwide. Hydra data sets are large and complex in structure, and existing processing and editing tools consisted of fragments of MATLAB code written by USGS scientists to satisfy personal research needs. This code did not meet STG quality control criteria. This toolbox permits engineers and scientists to monitor data quality by: 1. processing data with interactive critical review; 2. preserving data quality indicators; 3. preserving minimally processed and partially processed versions of data sets. STG usually deploys ADV and PCADP probes configured as downward looking, mounted on bottom tripods, with the objective of measuring high-resolution near-bed currents. The velocity profiles are recorded with minimal internal data processing. Also recorded are parameters such as temperature, conductivity, optical backscatter, light transmission, and high frequency pressure. Sampling consists of high-frequency bursts(1–10 Hz) bursts of long duration (5–30 minutes) at regular and recurring intervals for a duration of 1 to 6 months. The result is very large data files, often 500 MB per Hydra, per deployment, in Sontek's compressed binary format. This section introduces the Hydratools toolbox and provides information about the history of the system's development. The USGS philosophy regarding data quality is discussed to provide an understating of the motivation for creating the system. General information about the following topics will also be discussed: hardware and software required for the system, basic processing steps, limitations of program usage, and features that are unique to the programs.

Open-File Report↗