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Results for “Canadian Journal of Fisheries and Aquatic Sciences”

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1,688 records · Page 76Linked to original sources
USGS2024

The new self-anchored suspension (SAS) San Francisco Bay Bridge- Its response to a small earthquake

This paper presents a summary of previously published work (Celebi 2023) related to the new Self-Anchored Suspension (SAS) bridge that went into service within the last decade as a replacement for the older truss bridge spanning between Yerba Buena Island and Oakland, California, within the San Francisco Bay Area. During the October 19, 1989 M6.9 Loma Prieta earthquake, which occurred ~100 km south of the Bay Bridge, a section of the upper deck of the truss bridge fell onto the lower deck – thus closing this important lifeline between San Francisco and Oakland. The SAS is unique, self-anchored, and suspended by a single tower that is pivotal in trafficking the cable and hanger system to support the decks. The SAS bridge is extensively instrumented by the California Geological Survey’s Strong Motion Instrumentation Program (CSMIP). There are approximately 85 channels of accelerometers in the seismic monitoring system that recorded the October 14, 2019 Mw4.6 Pleasant Hill earthquake. The data allow a complex but identifiable coupled response of the deck, tower, and cable system. Both acceleration and displacement time-history data are used to extract significant frequencies using system identification methods, including spectral analyses. Results are compared to those from finite-element-model (FEM) analyses carried out during the design and analysis process of the bridge in 2002 (Nader et al. 2002). There are differences between FEM analyses results and those from the low amplitude shaking caused by a seismic event. An apparent frequency (period) of the SAS bridge is assessed (approximately 5.2 seconds). In a plot of deck length versus period, there is an almost linear relationship with periods of other regular suspension bridges, such as the Golden Gate Bridge and the Carquinez Bridge, both in the San Francisco Bay.

California↗
USGS2025

Extremophile hotspots linked to containerized industrial waste dumping in a deep-sea basin

Decaying barrels on the seafloor linked to DDT contamination have raised concerns about the public health implications of decades old industrial waste dumped off the coast of Los Angeles. To explore their contents, we collected sediment cores perpendicular to five deep-sea barrels. The concentration of DDT and its breakdown products were highly elevated relative to control sites yet did not vary with distance from the barrels, suggesting that they were not associated with the contamination. Sediment cores collected through white halos surrounding three barrels were enriched in calcite and had elevated pH. The associated microbial communities were low diversity and dominated by alkalophilic bacteria with metagenome-assembled genomes adapted to high pH. A solid concretion sampled between a white halo and barrel was composed of brucite, a magnesium hydroxide mineral that forms at high pH. Based on these findings, we postulate that leakage of containerized alkaline waste triggered the formation of mineral concretions that are slowly dissolving and raising the pH of the surrounding sediment pore water. This selects for taxa adapted to extreme alkalinity and drives the precipitation of “anthropogenic” carbonates forming white halos, which serve as a visual identifier of barrels that contained alkaline waste. Remarkably, containerized alkaline waste discarded >50 years ago represents a persistent pollutant creating localized mineral formations and microbial communities that resemble those observed at some hydrothermal systems. These formations were observed at one-third of the visually identified barrels in the San Pedro Basin and have unforeseen, long-term consequences for benthic communities in the region.

California↗
USGS2024

Parameter ESTimation with the Gauss–Levenberg–Marquardt algorithm: An intuitive guide

In this paper, we review the derivation of the Gauss–Levenberg–Marquardt (GLM) algorithm and its extension to ensemble parameter estimation. We explore the use of graphical methods to provide insights into how the algorithm works in practice and discuss the implications of both algorithm tuning parameters and objective function construction in performance. Some insights include understanding the control of both parameter trajectory and step size for GLM as a function of tuning parameters. Furthermore, for the iterative Ensemble Smoother (iES), we discuss the importance of noise on observations and show how iES can cope with non-unique outcomes based on objective function construction. These insights are valuable for modelers using PEST, PEST++, or similar parameter estimation tools.

Groundwater↗
USGS2025

SURF: An automated method for building nonplanar 3D fault models from earthquake hypocenters

Accurately characterizing 3D fault geometry is vital for improving our understanding of earthquake behavior and informing the development of seismic hazard models. Despite their importance, subsurface fault structures tend to be poorly constrained because of limitations in observational data. Improvements to the seismic networks and earthquake detection algorithms have increased the precision and volume of earthquake catalogs, which help illuminate detailed subsurface fault structure and provide the most direct information available about fault geometries at depth. We present a Python package to automate generating 3D fault geometries directly from hypocentral seismicity patterns. This method begins with clustering events based on their spatial density, identifying coherent patterns. Nearby clusters are then merged based on the similarity of their orientations. We fit nonplanar surfaces using support vector regression to balance surface accuracy with minimal deviations from planarity. The fault models are output as quadrilateral meshes at user‐defined resolution. In the process of generating the 3D fault surfaces, we compute the spatial density of seismicity around the surface and the planarity as quantitative metrics of the model outputs. As a proof of concept, we apply this approach to the San Andreas–Calaveras fault junction region and the 2019 Ridgecrest earthquake sequence, both in California, which contain complex subparallel faults well defined at the Earth’s surface and abundant microseismicity. These case studies demonstrate the method’s ability to model complex fault structures, including long continuous fault surfaces, crossing faults, variably dipping segments, and subparallel faults. We test the method on both standard network catalogs and double‐difference relocated catalogs. We find that our seismicity‐based fault model results align with published 3D models that incorporate additional constraints and interpretations ( Plesch et al. , 2020 ; Aagaard and Hirakawa, 2021 ). This workflow provides a low‐user‐input solution for estimating fault geometries at depth from earthquake catalogs.

California↗
USGS2024

Earthquake-triggered ground-failure inventory associated with the M7.1 2018 Southcentral Alaska earthquake

The 30 November 2018, magnitude (Mw) 7.1 earthquake in Southcentral Alaska triggered substantial landslides, liquefaction, and ground cracking throughout the region, resulting in widespread geotechnical damage to buildings and infrastructure. Despite a challenging reconnaissance and remote-sensing environment, we constructed a detailed digital inventory of ground failure associated with the event from several sources. Sources included information derived from remotely sensed data, and data compiled from literature, social media postings, and earthquake damage information compiled by local, state, and federal agencies. Each instance of ground failure within the inventory contains information on the location and type of observed ground failure, and the methods and data used to document the occurrence. Where high-quality data, such as LIDAR or satellite imagery, were available and showed the ground-failure instance clearly, the extent is mapped as a polygon or polyline. All other locations are mapped as points. There are a total of 886 ground-failure instances documented within the inventory (400 landslides, 286 liquefaction features, and 200 features unattributed to specific processes). A semi-quantitative confidence scheme is used to describe mapping certainty associated with each ground-failure feature. This inventory represents a relatively moderate ground-failure-triggering event that occurred in a subarctic environment. This data paper describes the content within the inventory, the inventory data collection procedures, and limitations of the data. Events of this type are not often documented in detail; thus, adding the inventory data to the US Geological Survey Open Repository of Earthquake-Triggered Ground-Failure Inventories further diversifies the datasets available to the scientific community to be used to better understand and model earthquake-triggered ground failure.

Alaska↗
USGS2024

Site response in the Walnut Creek–Concord region of the San Francisco Bay, California: Ground motion amplification in a fault-bounded basin

Thirty‐seven portable accelerometers were deployed in the eastern San Francisco Bay communities of Walnut Creek and Concord to study site response in a fault‐bounded, urban, sedimentary basin. Local earthquakes were recorded for a period of two years from 2017 to 2019 resulting in 101 well‐recorded events. Site response is estimated by two methods: the reference site spectral ratio method and a source‐site spectral inversion method. The reference site spectral ratio method allows investigation of the variability of site amplification with source azimuth and frequency. The source‐site spectral inversion method yields the best least‐squares fit to site response for a database of ground‐motion records. Both methods show substantial amplification in the Walnut Creek–Concord basin below 2 Hz indicating strong surface‐wave development. Greater amplification is seen for sources aligned along the long axis of the basin. Inversion using close‐in sources at short distances yields lower amplification at longer periods than the entire data set due to reduced surface‐wave generation for steeper angles of incidence. Inversion of site response spectra for shallow shear‐wave velocity using a global search algorithm yields V S30 values consistent with generalized mapping results based on geology and topography but with greater variability due to local site variations. 3D finite‐element modeling shows greater amplification in the Walnut Creek–Concord basin with a basin‐edge effect likely contributing to higher ground motions. Topography is also seen to lead to increased scattering and shadowing effects.

California↗
USGS2026

Season and antecedent conditions impact concentration-discharge relationships for dissolved organic carbon and alkalinity in southeast Alaskan watershed

Fluvial export of dissolved carbon plays an important role in watershed-scale biogeochemistry. Predicted changes in climate are expected to impact watershed hydrologic regimes, and in turn, the sources and export of dissolved carbon from watersheds. Here, we utilize high resolution measurements of discharge and dissolved carbon concentration to examine how concentration-discharge (CQ) relationships vary seasonally and during high flow events over the main runoff season (May–October) in a temperate forested watershed in Southeast Alaska. Concentration-discharge relationships for dissolved organic carbon (DOC) and alkalinity demonstrated strong seasonal patterns, with more linear relationships in May and June versus other months. Changing power law model slopes ( b values; the exponent in a power law regression between runoff and carbon yields) indicated potentially shifting watershed sources (biogenic vs. geologic) and contrasting dominant flowpaths (shallow vs. deeper groundwater) for DOC and alkalinity over the sampling period. During the largest storm event of the study, DOC and alkalinity b values shifted from an overall pattern of transport (mean b = 1.58 values >1.0 indicate transport limitation) and source limitation (mean b = 0.48, values <1.0 indicate source limitation) to chemostatic (DOC, b = 0.99; alkalinity, b = 1.019). In June through August, patterns in hysteresis index suggest that CQ relationships were altered when storms followed in close succession to each other. Together, these findings indicate that seasonal and antecedent flow conditions play a role in dissolved carbon export from forested watersheds. Understanding these dynamics, particularly during winter months, will become increasingly important as changes to hydroclimate impact riverine carbon export.

Alaska↗
USGS2024

A robust quantitative method to distinguish runoff-generated debris flows from floods

Debris flows and floods generated by rainfall runoff occur in rocky mountainous landscapes and burned steeplands. Flow type is commonly identified post-event through interpretation of depositional structures, but these may be poorly preserved or misinterpreted. Prior research indicates that discharge magnitude is commonly amplified in debris flows relative to floods due to volumetric bulking and increased frictional resistance. Here, we use this flow amplification to develop a metric ( Q* ) to separate debris flows from floods based on the ratio of observed peak discharge to the theoretical maximum water discharge from rainfall runoff. We compile 642 observations of floods and debris flows and demonstrate that Q* distinguishes flow type to ∼92% accuracy. Q* allows for accurate identification of debris flows through simple channel cross-section surveys rather than through qualitative interpretation of deposits, and therefore should increase the performance of models and engineered structures that require accurate flow-type observations.

Geophysical Research Letters↗
USGS2025

Long‐period ground motions from dynamic rupture simulations of large earthquakes on the creeping Hayward–Calaveras–Rodgers Creek fault system

he Hayward, Calaveras, and Rodgers Creek faults in the San Francisco Bay region of California have a high probability of producing a large earthquake in the next decades. Although these faults creep, the creep is insufficient to keep up with their relatively rapid slip rates on their deepest sections, so they have been storing tectonic strain since their last large earthquakes, with the Hayward’s and Rodgers Creek’s more than 150 yr ago. We do not know what the next large Hayward–Calaveras–Rodgers Creek earthquakes will look like or how strongly they will shake the San Francisco Bay region. Harris et al. (2021) used the 3D dynamic (spontaneous) rupture method to simulate large earthquakes on these creeping faults. In this article, we examine the resulting simulated long‐period ( T > 1 s) ground shaking from 0 to 50 km distance, for earthquakes nucleating on the Hayward fault and earthquakes nucleating on the Rodgers Creek fault. We compare these simulated long‐period ground motions with the Boore et al. (2014) well‐established empirically based ground‐motion model suitable for the slowest material velocity in our 3D velocity structure. We find that the simulated long‐period ground motions from the creeping‐fault earthquake scenarios produce a reasonable agreement with the empirical expectations if frictional cohesion is included only where it is appropriate.

California↗
USGS2026

Assessing natural recharge in Indian Wells Valley, California: A Basin Characterization Model case study

The communities in Indian Wells Valley (IWV), in the northern Mojave Desert in California, rely on groundwater for domestic and agricultural use. Mountain front recharge from the surrounding Sierra Nevada is the main source of natural recharge to the valley. Increased urbanization, agricultural development, and groundwater pumping during recent decades put IWV in a state of critical overdraft. The U.S. Geological Survey Basin Characterization Model, version 8 (BCMv8) was used to evaluate historical and future climate and hydrologic conditions in IWV. The BCMv8 estimated natural recharge in IWV at 10.7 million cubic meters (Mm 3 ) per year for the period from 1981 to 2010. Future patterns of water balance variables using three future climate scenarios, hot-wet, hot-dry, and warm-moderately wet, were calculated for mid-century (2040–69) and end-of-century (2070–99) periods. Results for both wet models projected an increase in recharge in both periods, whereas the hot-dry model projected a decrease in recharge in both periods. All models reported a large increase in seasonal variability in recharge, indicating more future availability and frequent occurrences of drought years. All climate scenarios projected an increase in climatic water deficit in both periods. These increases in irrigation demand and variability of water supply highlight the importance of strategic management planning for the sustainability of water resources in IWV.

California↗
USGS2024

Representation of surface-water flows using Gradient-Related Discharge in an Everglades Network

The Everglades Depth Estimation Network interpolates water-level gage data to produce daily water-level elevations for the Everglades in south Florida. These elevations were used to estimate flow vectors (gradients and directions) and volumetric flow rates using the Gradient-Related Discharge in an Everglades Network (GARDEN) application developed by the U.S. Geological Survey in cooperation with the U.S. Army Corps of Engineers. Flow rates in both the east-west and north-south directions were computed on a 400-meter square grid using modified parameters in the Manning’s equation. The frictional resistance parameter in the Manning’s equation was calibrated to measured flow rates at coastal creeks fed by Everglades Depth Estimation Network boundary flows. Levees and other features that act as barriers to flow were defined as “no-flow” grid cells where vectors were set to zero. The flow volume magnitudes were calibrated with 2020 daily values of coastal river flows, and verification was performed using 2021 data. Within a given day, the measured coastal river flows fluctuate more than the GARDEN boundary flows because of tidal and wind forcings. Because the GARDEN boundary flows were the upstream water source for the coastal rivers, calibration focused on matching average daily flow volumes rather than daily fluctuations. The Pearson’s correlation coefficient is 0.766 for the 2020 calibration period and 0.566 for the 2021 verification period. Applying GARDEN to periods with hydraulic-control-structure releases allows the propagation of structure flows to be seen in the daily flow-vector maps along with the multiday response of flows farther downgradient. Flow vectors may be overestimated near control structures because of difficulties in resolving the water gradient downstream from the structure. Flow vectors farther from the structure are more accurate than those near the structure.

Florida↗
USGS2025

Airborne geophysical analysis to decipher salinization for coastal Louisiana

Coastal Louisiana is known for saltwater intrusion that threatens wetlands, aquifers, and rivers. However, the extent of saltwater intrusion is not well understood. This study develops an innovative framework with airborne electromagnetic (AEM) data to map chloride concentration distributions for wetlands in the Mississippi River deltaic plain and Chenier plain as well as for the Mississippi River Valley alluvial aquifer (MRVA) and Chicot aquifer. Moreover, the framework maps chloride concentrations along the Mississippi River and Atchafalaya River. Key components in the framework include the establishment of resistivity-to-chloride concentration transformation, 3D resistivity architecture building through geostatistics, and the employment of a lithologic model. The transformation functions correlate AEM resistivity data with porewater salinity measurements and groundwater and river chloride samples. The results show that AEM data reliably infers soil water chloride concentrations and correlates well with the distribution of various marsh types. AEM data reveals extensive saltwater presence at depth and near the coast, originating from salt domes and the Gulf of Mexico, respectively. The saltwater upconing pattern in the Chicot aquifer is likely due to excessive groundwater withdrawals. The AEM data also confirms a distinct tongue of saltwater intruding into the Atchafalaya Basin from the Gulf. The AEM data helps to identify faults that are obscured or eroded at the surface, which appear as leaky barriers in the subsurface where dramatic changes in chloride concentration are apparent. Finally, this study uses the AEM data to infer the presence of an extensive seawater wedge in the Mississippi River and Atchafalaya River.

Louisiana↗
USGS2025

The National Map Corps—Federal Emergency Management Agency and Oak Ridge National Laboratory pilot project report

This report provides an overview of the U.S. Geological Survey National Map Corps —Federal Emergency Management Agency and Oak Ridge National Laboratory pilot project in St. James Parish, Louisiana, that began in February 2024 and ended at the end of March 2024. The project used the power of The National Map Corps’ volunteer community to improve building classifications in the original Federal Emergency Management Agency’s U.S.A. Structures dataset. The report highlights the project’s completion and details the work and results achieved through a collaborative effort to enhance geospatial data quality and utility.

Open-File Report↗
USGS2026

A practical framework for identifying genetic subpopulations and ESUs: Insights for IUCN assessments and broader management

Species conservation assessments evaluate extinction risk, and recovery potential, advancing species persistence through guiding resource prioritization and planning. Assessment frameworks, including the International Union for Conservation of Nature Red List and Green Status of Species, typically focus on species as a whole. Importantly, they do not routinely account for genetically distinct units or do not have standardized methods of unit delineation. This limits the representation of genetically distinct components, including adaptive genetic diversity that underpins long-term resilience and recovery. Incorporating standardized within-species units like subpopulations and Evolutionarily Significant Units (ESUs) into species assessments could help address this oversight. However, identifying and delineating such units remain challenging, particularly when molecular data are limited. Here, we propose a flexible framework that integrates molecular and non-molecular evidence to identify both subpopulations and ESUs across taxa, providing a practical tool to incorporate within-species diversity into conservation assessments.

BioScience↗
USGS2026

Emergent headwater types for watershed monitoring, research, and planning

Headwaters—that is headwater streams and the watersheds they drain—strongly influence water quality, ecosystem services, and hydrologic connectivity, yet remain poorly mapped, monitored, and understood at large spatial scales. Using available spatial data to classify headwater “types” could therefore enhance the utility of sparse monitoring data to advance research and watershed planning—and help update literature-based perceptual models of headwaters as steep, forested, and minimally disturbed watersheds. Here, we analyze headwaters across the contiguous United States to quantify how their attributes (climate, topography, land cover, soils) vary regionally and differ from their downstream watersheds. Our analysis (a) identified seven dominant headwater types with distinct combinations of biophysical and climatic attributes and (b) revealed systematic contrasts with downstream watersheds, with strongest differences in attributes representing potential flowpath depth. Our findings offer a transferable framework for classifying, modeling, and managing these critical yet understudied components of the hydrologic network.

conterminous United States↗
USGS2025

An early Holocene wet period in the southwestern United States

Multiple generations of spring-fed streams traversed ∼800 km 2 of the Las Vegas Valley in southern Nevada between ca. 10.9 ka and 8.5 ka, depositing an extensive tufa network. The scale of this network and diversity of tufa morphologies is novel in North America and offers an opportunity to obtain quantitative paleoclimate data for the region during the early Holocene. We determined isotopic compositions and estimated past temperatures using clumped isotope data from early Holocene tufa on the valley floor (698 m) as well as tufa forming today at higher elevation in the nearby Spring Mountains at Cold Creek Spring (1856 m). Modern and fossil tufa yielded comparably low δ 18 O values, implying that source waters for both were derived from high-elevation winter precipitation. Clumped isotope temperatures of modern tufa average 15.8 ± 2.5 °C, aligning with mean summer temperatures of the emergent spring water, and indicate equilibrium conditions of tufa formation. The early Holocene tufa yielded similar clumped isotope temperatures, averaging 15.2 ± 3.9 °C, meaning it precipitated at temperatures that occur at much higher elevations today. The Las Vegas tufa record, combined with nearby and temporally correlative paleospring and lacustrine records, suggest that cool/wet conditions prevailed throughout the Mojave Desert during the early Holocene. These records also demonstrate that spring ecosystems responded to millennial-scale hydroclimate variations that supersede climate change driven solely by insolation. The previously unrecognized pattern of ecosystem response to hydroclimate documented here may assist in understanding climate drivers for the early Holocene and provide critical information for the fate of groundwater-dependent ecosystems in the southwestern United States.

Nevada↗
USGS2026

Preliminary geology of the North Meadow Creek Area, Tobacco Root Mountains, southwest Montana: The North Meadow Creek Fault

This report documents a previously unmapped fault, informally referred to herein as the North Meadow Creek fault, on the east flank of the Tobacco Mountains of southwestern Montana. This fault has an apparently long and complex history, including Quaternary offset of an older alluvial terrace, offset of a debris flow of presumed Pleistocene age, offset of rhyolite lava flows of presumed Tertiary age from their presumed source several kilometers east, on the opposite side of the fault, and offset and possible rotation of blocks of Archean gneiss on northeast side of the fault. The western part of the fault is covered by glacial moraines of two apparent ages, both Pleistocene.

Montana↗
USGS2025

Structural controls on splay fault rupture dynamics during Cascadia megathrust earthquakes

Great subduction earthquakes ( M w ≥ 8.0) can generate devastating tsunamis by rapidly displacing the seafloor and overlying water column. These potentially tsunamigenic seafloor offsets result from coseismic fault slip and deformation beneath or within the accretionary wedge. The mechanics of these shallow rupture phenomena and their dependence on subduction zone properties remain unresolved, partly due to the sparsity of offshore observations of shallow megathrust earthquake deformation. Here, we analyze how offshore structure influences shallow rupture mechanics and slip partitioning using 3D dynamic earthquake simulations of the Cascadia subduction zone (CSZ) megathrust with and without variably dipping seaward- or landward-vergent splay faults in the wedge that sole into the megathrust. Resulting tradeoffs between splay and megathrust slip reveal structural controls on rupture partitioning, with greater splay slip leading to less shallow megathrust slip updip. Gently dipping and seaward-vergent splays host more slip than those with steeper, landward-vergent splays. To isolate the underlying mechanisms, we compare models with Andersonian and plunging principal stresses. Results suggest distinct static and dynamic processes control the dip- and vergence-dependence of splay rupture: static (mis)alignment relative to far-field tectonic loading favors slip on more optimally oriented, shallowly dipping splay faults. In contrast, dynamic stress interactions of an updip-propagating megathrust rupture front with the free surface and potential branch faults favor forward branching onto seaward-vergent splays and inhibit backward branching onto landward-vergent splays. Resulting seafloor displacements suggest splay fault structure may influence coseismic tsunami source processes, highlighting the importance of dynamically viable rupture scenarios in subduction hazard assessments.

Cascadia subduction zone↗