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At least 1,351 records · Page 75Linked to original sources
USGS2007

Three distinct clades of cultured heterocystous cyanobacteria constitute the dominant N2-fixing members of biological soil crusts of the Colorado Plateau, USA

The identity of the numerically dominant N2-fixing bacteria in biological soil crusts of the Colorado Plateau region and two outlying areas was determined using multiple approaches, to link the environmental diversity of nifH gene sequences to cultured bacterial isolates from the regions. Of the nifH sequence-types detected in soil crusts of the Colorado Plateau, 89% (421/473) were most closely related to nifH signature sequences from cyanobacteria of the order Nostocales. N2-fixing cyanobacterial strains were cultured from crusts and their morphotypes, 16S rRNA gene and nifH gene sequences were characterized. The numerically dominant diazotrophs in the Colorado Plateau crusts fell within three clades of heterocystous cyanobacteria. Two clades are well-represented by phylogenetically and morphologically coherent strains, corresponding to the descriptions of Nostoc commune and Scytonema hyalinum, which are widely recognized as important N2-fixing components of soil crusts. A third, previously-overlooked clade was represented by a phylogenetically coherent but morphologically diverse group of strains that encompass the morphogenera Tolypothrix and Spirirestis. Many of the strains in each of these groups contained at least two nifH copies that represent different clusters in the nifH environmental survey. ?? 2007 Federation of European Microbiological Societies.

FEMS Microbiology Ecology↗
USGS2020

Biological soil crusts in ecological restoration: Emerging research and perspectives

Drylands encompass over 40% of terrestrial ecosystems and face significant anthropogenic degradation causing a loss of ecosystem integrity, services, and deterioration of social‐ecological systems. To combat this degradation, some dryland restoration efforts have focused on the use of biological soil crusts (biocrusts): complex communities of cyanobacteria, algae, lichens, bryophytes, and other organisms living in association with the top millimeters of soil. Biocrusts are common in many ecosystems and especially drylands. They perform a suite of ecosystem functions: stabilizing soil surfaces to prevent erosion, contributing carbon through photosynthesis, fixing nitrogen, and mediating the hydrological cycle in drylands. Biocrusts have emerged as a potential tool in restoration; developing methods to implement effective biocrust restoration has the potential to return many ecosystem functions and services. Although culture‐based approaches have allowed researchers to learn about the biology, physiology, and cultivation of biocrusts, transferring this knowledge to field implementation has been more challenging. A large amount of research has amassed to improve our understanding of biocrust restoration, leaving us at an opportune time to learn from one another and to join approaches for maximum efficacy. The articles in this special issue improve the state of our current knowledge in biocrust restoration, highlighting efforts to effectively restore biocrusts through a variety of different ecosystems, across scales and utilizing a variety of lab and field methods. This collective work provides a useful resource for the scientific community as well as land managers.

Restoration Ecology↗
USGS2021

Biotic and abiotic treatments as a bet-hedging approach to restoring plant communities and soil functions

Two related concepts in restoration ecology include the relative interchangeability of biotic and abiotic restoration treatments for initiating recovery and bet hedging using multiple restoration approaches to increase the likelihood of favorable restoration outcomes. We used these concepts as a framework to implement a factorial experiment including biotic (outplanting greenhouse-grown individuals of three perennial species) and abiotic treatments (constructing microtopography or vertical mulch consisting of upright, dead plant material). These treatments were designed to stimulate native plant recruitment and reverse soil degradation at four disturbed sites in the Sonoran Desert, U.S.A. The first growing season after the restoration treatments was the driest of the last 47 years, and 100% of outplants died. While the biotic treatment failed, the vertical mulch abiotic treatment increased native shrub seedling cover at the driest site and reversed soil loss across sites by increasing soil accumulation by 6× to 2 cm/year. Results revealed that (1) inexpensive, minimal-input abiotic treatments outperformed resource-intensive biotic treatments; (2) the restoration effort withstood the total failure of a major component (outplanting) to nevertheless achieve key restoration benefits within 2–3 growing seasons; and (3) incorporating multiple treatment types served as a bet-hedging approach to buffer against treatment failures. Integrating minimal-input abiotic treatments in restoration warrants consideration given their low cost and bet-hedging potential.

Restoration Ecology↗
USGS1984

A simple model of ice segregation using an analytic function to model heat and soil-water flow

For slowly moving freezing fronts in soil, the heat-transport equation may be approximated by the Laplacian of temperature. Consequently, potential theory may be assumed to apply and the temperature state can be approximated by an analytic function. The movement of freezing fronts may be approximated by a time-stepped solution of the phase-change problem, thus solving directly for heat flow across a freezing or thawing front. Moisture transport may approximated by using an exact solution of the moisture-transport equation assuming quasi-steady-state conditions, appropriate boundary conditions, and an exponential function relating unsaturated hydraulic conductivity (defined within the thawed zones) to pore water pressure (tension). This approach is used to develop a single model of ice segregation (frost-heave) in freezing soils. Applications to published and experimental one-dimension soil column freezing data show promising results.

Journal of Energy Resources Technology, Transactio↗
USGS2004

Soils of eagle crater and Meridiani Planum at the opportunity Rover landing site

The soils at the Opportunity site are fine-grained basaltic sands mixed with dust and sulfate-rich outcrop debris. Hematite is concentrated in spherules eroded from the strata. Ongoing saltation exhumes the spherules and their fragments, concentrating them at the surface. Spherules emerge from soils coated, perhaps from subsurface cementation, by salts. Two types of vesicular clasts may represent basaltic sand sources. Eolian ripples, armored by well-sorted hematite-rich grains, pervade Meridiani Planum. The thickness of the soil on the plain is estimated to be about a meter. The flatness and thin cover suggest that the plain may represent the original sedimentary surface.

Science↗
USGS1992

Dynamics of soil carbon during deglaciation of the Laurentide Ice Sheet

Deglaciation of the Laurentide Ice Sheet in North America was accompanied by sequestration of organic carbon in newly exposed soils. The greatest rate of land exposure occurred around 12,000 to 8,000 years ago, and the greatest increase in the rate of carbon sequestration by soils occurred from 8,000 to 4,000 years ago. Sequestration of carbon in deglaciated peat lands continues today, and a steady state has not been reached. The natural rate of carbon sequestration in soils, however, is small relative to the rate of anthropogenic carbon dioxide production.

Science↗
USGS2001

Fractionation of Fe isotopes by soil microbes and organic acids

Small natural variations in Fe isotopes have been attributed to biological cycling. However, without understanding the mechanism of fractionation, it is impossible to interpret such variations. Here we show that the δ 56 Fe of Fe dissolved from a silicate soil mineral by siderophore-producing bacteria is as much as 0.8% lighter than bulk Fe in the mineral. A smaller isotopic shift is observed for Fe released abiotically by two chelates, and the magnitude of the shift increases with affinity of the ligand for Fe, consistent with a kinetic isotope effect during hydrolysis of Fe at the mineral surface. Fe dissolved abiotically without chelates shows no isotopic shift. The δ 56 Fe of the exchange fraction on soil grains is also lighter by ~0.6%-1% than Fe from both hornblende and iron oxyhydroxides. The kinetic isotope effect is therefore preserved in open systems such as soils. when recorded in the rock record, Fe isotopic fractionation could document Fe transport by organic molecules or by microbes where such entities were present in the geologic past.

Geology↗
USGS2008

Geochemical evidence for airborne dust additions to soils in Channel Islands National Park, California

There is an increasing awareness that dust plays important roles in climate change, biogeochemical cycles, nutrient supply to ecosystems, and soil formation. In Channel Islands National Park, California, soils are clay-rich Vertisols or Alfisols and Mollisols with vertic properties. The soils are overlain by silt-rich mantles that contrast sharply with the underlying clay-rich horizons. Silt mantles contain minerals that are rare or absent in the volcanic rocks that dominate these islands. Immobile trace elements (Sc-Th-La and Ta-Nd-Cr) and rare-earth elements show that the basalt and andesite on the islands have a composition intermediate between upper-continental crust and oceanic crust. In contrast, the silt fractions and, to a lesser extent, clay fractions of the silt mantle have compositions closer to average upper-continental crust and very similar to Mojave Desert dust. Island shelves, exposed during the last glacial period, could have provided a source of eolian sediment for the silt mantles, but this is not supported by mineralogical data. We hypothesize that a more likely source for the silt-rich mantles is airborne dust from mainland California and Baja California, either from the Mojave Desert or from the continental shelf during glacial low stands of sea. Although average winds are from the northwest in coastal California, easterly winds occur numerous times of the year when "Santa Ana" conditions prevail, caused by a high-pressure cell centered over the Great Basin. The eolian silt mantles constitute an important medium of plant growth and provide evidence that abundant eolian silt and clay may be delivered to the eastern Pacific Ocean from inland desert sources. ?? 2007 Geological Society of America.

Geological Society of America Bulletin↗
USGS2013

Observed impacts of duration and seasonality of atmospheric-river landfalls on soil moisture and runoff in coastal northern California

This study is motivated by diverse needs for better forecasts of extreme precipitation and floods. It is enabled by unique hourly observations collected over six years near California’s Russian River and by recent advances in the science of atmospheric rivers (ARs). This study fills key gaps limiting the prediction of ARs and, especially, their impacts by quantifying the duration of AR conditions and the role of duration in modulating hydrometeorological impacts. Precursor soil moisture conditions and their relationship to streamflow are also shown. On the basis of 91 well-observed events during 2004-10, the study shows that the passage of ARs over a coastal site lasted 20 h on average and that 12% of the AR events exceeded 30 h. Differences in storm-total water vapor transport directed up the mountain slope contribute 74% of the variance in storm-total rainfall across the events and 61% of the variance in storm-total runoff volume. ARs with double the composite mean duration produced nearly 6 times greater peak streamflow and more than 7 times the storm-total runoff volume. When precursor soil moisture was less than 20%, even heavy rainfall did not lead to significant streamflow. Predicting which AR events are likely to produce extreme impacts on precipitation and runoff requires accurate prediction of AR duration at landfall and observations of precursor soil moisture conditions.

California↗
USGS2016

An investigation of soil-structure interaction effects observed at the MIT Green Building

The soil-foundation impedance function of the MIT Green Building is identified from its response signals recorded during an earthquake. Estimation of foundation impedance functions from seismic response signals is a challenging task, because: (1) the foundation input motions (FIMs) are not directly measurable, (2) the as-built properties of the super-structure are only approximately known, and (3) the soil-foundation impedance functions are inherently frequency-dependent. In the present study, aforementioned difficulties are circumvented by using, in succession, a blind modal identification (BMID) method, a simplified Timoshenko beam model (TBM), and a parametric updating of transfer functions (TFs). First, the flexible-base modal properties of the building are identified from response signals using the BMID method. Then, a flexible-base TBM is updated using the identified modal data. Finally, the frequency-dependent soil-foundation impedance function is estimated by minimizing the discrepancy between TFs (of pairs instrumented floors) that are (1) obtained experimentally from earthquake data and (2) analytically from the updated TBM. Using the fully identified flexible-base TBM, the FIMs as well as building responses at locations without instruments can be predicted, as demonstrated in the present study.

Massachussets↗
USGS2011

Comparison and analysis of empirical equations for soil heat flux for different cropping systems and irrigation methods

We evaluated the performance of four models for estimating soil heat flux density (G) in maize (Zea mays L.) and soybean (Glycine max L.) fields under different irrigation methods (center-pivot irrigated fields at Mead, Nebraska, and subsurface drip irrigated field at Clay Center, Nebraska) and rainfed conditions at Mead. The model estimates were compared against measurements made during growing seasons of 2003, 2004, and 2005 at Mead and during 2005, 2006, and 2007 at Clay Center. We observed a strong relationship between the G and net radiation (Rn) ratio (G/Rn) and the normalized difference vegetation index (NDVI). When a significant portion of the ground was bare soil, G/Rn ranged from 0.15 to 0.30 and decreased with increasing NDVI. In contrast to the NDVI progression, the G/Rn ratio decreased with crop growth and development. The G/Rn ratio for subsurface drip irrigated crops was smaller than for the center-pivot irrigated crops. The seasonal average G was 13.1%, 15.2%, 10.9%, and 12.8% of Rn for irrigated maize, rainfed maize, irrigated soybean, and rainfed soybean, respectively. Statistical analyses of the performance of the four models showed a wide range of variation in G estimation. The root mean square error (RMSE) of predictions ranged from 15 to 81.3 W m-2. Based on the wide range of RMSE, it is recommended that local calibration of the models should be carried out for remote estimation of soil heat flux.

Transactions of the ASABE↗
USGS2016

Trace elements in stormflow, ash, and burned soil following the 2009 station fire in southern California

Most research on the effects of wildfires on stream water quality has focused on suspended sediment and nutrients in streams and water bodies, and relatively little research has examined the effects of wildfires on trace elements. The purpose of this study was two-fold: 1) to determine the effect of the 2009 Station Fire in the Angeles National Forest northeast of Los Angeles, CA on trace element concentrations in streams, and 2) compare trace elements in post-fire stormflow water quality to criteria for aquatic life to determine if trace elements reached concentrations that can harm aquatic life. Pre-storm and stormflow water-quality samples were collected in streams located inside and outside of the burn area of the Station Fire. Ash and burned soil samples were collected from several locations within the perimeter of the Station Fire. Filtered concentrations of Fe, Mn, and Hg and total concentrations of most trace elements in storm samples were elevated as a result of the Station Fire. In contrast, filtered concentrations of Cu, Pb, Ni, and Se and total concentrations of Cu were elevated primarily due to storms and not the Station Fire. Total concentrations of Se and Zn were elevated as a result of both storms and the Station Fire. Suspended sediment in stormflows following the Station Fire was an important transport mechanism for trace elements. Cu, Pb, and Zn primarily originate from ash in the suspended sediment. Fe primarily originates from burned soil in the suspended sediment. As, Mn, and Ni originate from both ash and burned soil. Filtered concentrations of trace elements in stormwater samples affected by the Station Fire did not reach levels that were greater than criteria established for aquatic life. Total concentrations for Fe, Pb, Ni, and Zn were detected at concentrations above criteria established for aquatic life.

California↗
USGS2016

Differential responses of dinitrogen fixation, diazotrophic cyanobacteria and ammonia oxidation reveal a potential warming-induced imbalance of the N-cycle in biological soil crusts

N 2 fixation and ammonia oxidation (AO) are the two most important processes in the nitrogen (N) cycle of biological soil crusts (BSCs). We studied the short-term response of acetylene reduction assay (ARA) rates, an indicator of potential N 2 fixation, and AO rates to temperature (T, -5°C to 35°C) in BSC of different successional stages along the BSC ecological succession and geographic origin (hot Chihuahuan and cooler Great Basin deserts). ARA in all BSCs increased with T until saturation occurred between 15 and 20°C, and declined at 30–35°C. Culture studies using cyanobacteria isolated from these crusts indicated that the saturating effect was traceable to their inability to grow well diazotrophically within the high temperature range. Below saturation, temperature response was exponential, with Q 10 significantly different in the two areas (~ 5 for Great Basin BSCs; 2–3 for Chihuahuan BSCs), but similar between the two successional stages. However, in contrast to ARA, AO showed a steady increase to 30–35°C in Great Basin, and Chihuhuan BSCs showed no inhibition at any tested temperature. The T response of AO also differed significantly between Great Basin (Q 10 of 4.5–4.8) and Chihuahuan (Q 10 of 2.4–2.6) BSCs, but not between successional stages. Response of ARA rates to T did not differ from that of AO in either desert. Thus, while both processes scaled to T in unison until 20°C, they separated to an increasing degree at higher temperature. As future warming is likely to occur in the regions where BSCs are often the dominant living cover, this predicted decoupling is expected to result in higher proportion of nitrates in soil relative to ammonium. As nitrate is more easily lost as leachate or to be reduced to gaseous forms, this could mean a depletion of soil N over large landscapes globally.

PLoS ONE↗
USGS2005

Sonoran Desert winter annuals affected by density of red brome and soil nitrogen

Red brome [ Bromus madritensis subsp. rubens (L.) Husn.] is a Mediterranean winter annual grass that has invaded Southwestern USA deserts. This study evaluated interactions among 13 Sonoran Desert annual species at four densities of red brome from 0 to the equivalent of 1200 plants m −2 . We examined these interactions at low (3 μg) and high (537 μg NO 3 − g soil −1 ) nitrogen (N) to evaluate the relative effects of soil N level on survival and growth of native annuals and red brome. Red brome did not affect emergence or survival of native annuals, but significantly reduced growth of natives, raising concerns about effects of this exotic grass on the fecundity of these species. Differences in growth of red brome and of the three dominant non nitrogen-fixing native annuals at the two levels of soil N were similar. Total species biomass of red brome was reduced by 83% at low, compared to high, N levels, whereas that of the three native species was reduced by from 42 to 95%. Mean individual biomass of red brome was reduced by 87% at low, compared to high, N levels, whereas that of the three native species was reduced by from 72 to 89%.

American Midland Naturalist↗
USGS2009

Effects of an invasive plant species, celastrus orbiculatus, on soil composition and processes

Celastrus orbiculatus is a non-native, invasive liana that was introduced to the United States in the 1860s and has spread rapidly throughout the Northeast Several attributes contribute to the invasiveness of C. orbiculatus, including tolerance to a wide range of light levels and habitat types. We compared soil characteristics in seven sets of adjacent, paired plots, spanning a range of habitats and soil types, with and without C. orbiculatus. The paired plots were similar other than the presence or absence of Celastrus. Plots with C. orbiculatus had significantly higher soil pH, potassium, calcium and magnesium levels. Furthermore, nitrogen mineralization and litter decomposition rates were higher in plots with C. orbiculatus. Phosphorus levels were not significantly different between the paired plots. The results of this study contribute to the growing body of research of the effects of invasive species on ecosystem processes.

American Midland Naturalist↗
USGS2011

Decomposition of heterogeneous organic matterand its long-term stabilization in soils

Soil organic matter is a complex mixture of material with heterogeneous biological, physical, and chemical properties. Decomposition models represent this heterogeneity either as a set of discrete pools with different residence times or as a continuum of qualities. It is unclear though, whether these two different approaches yield comparable predictions of organic matter dynamics. Here, we compare predictions from these two different approaches and propose an intermediate approach to study organic matter decomposition based on concepts from continuous models implemented numerically. We found that the disagreement between discrete and continuous approaches can be considerable depending on the degree of nonlinearity of the model and simulation time. The two approaches can diverge substantially for predicting long-term processes in soils. Based on our alternative approach, which is a modification of the continuous quality theory, we explored the temporal patterns that emerge by treating substrate heterogeneity explicitly. The analysis suggests that the pattern of carbon mineralization over time is highly dependent on the degree and form of nonlinearity in the model, mostly expressed as differences in microbial growth and efficiency for different substrates. Moreover, short-term stabilization and destabilization mechanisms operating simultaneously result in long-term accumulation of carbon characterized by low decomposition rates, independent of the characteristics of the incoming litter. We show that representation of heterogeneity in the decomposition process can lead to substantial improvements in our understanding of carbon mineralization and its long-term stability in soils.

Ecological Monographs↗
USGS2004

Changes in plant functional groups, litter quality, and soil carbon and nitrogen mineralization with sheep grazing in an Inner Mongolian Grassland

This study reports on changes in plant functional group composition, litter quality, and soil C and N mineralization dynamics from a 9-year sheep grazing study in Inner Mongolia. Addressed are these questions: 1) How does increasing grazing intensity affect plant community composition? 2) How does increasing grazing intensity alter soil C and N mineralization dynamics? 3) Do changes in soil C and N mineralization dynamics relate to changes in plant community composition via inputs of the quality or quantity of litter? Grazing plots were set up near the Inner Mongolia Grassland Ecosystem Research Station (IMGERS) with 5 grazing intensities: 1.3, 2.7, 4.0, 5.3, and 6.7 sheep ha −1 ·yr −1 . Plant cover was lower with increasing grazing intensity, which was primarily due to a dramatic decline in grasses, Carex duriuscula , and Artemisia frigida . Changes in litter mass and percentage organic C resulted in lower total C in the litter layer at 4.0 and 5.3 sheep ha −1 ·yr −1 compared with 2.7 sheep ha −1 ·yr −1 . Total litter N was lower at 5.3 sheep ha −1 ·yr −1 compared with 2.7 sheep ha −1 ·yr −1 . Litter C:N ratios, an index of litter quality, were significantly lower at 4.0 sheep ha −1 ·yr −1 relative to 1.3 and 5.3 sheep ha −1 ·yr −1 . Cumulative C mineralized after 16 days decreased with increasing grazing intensity. In contrast, net N mineralization ( NH 4 NO − 3 ) after a 12-day incubation increased with increasing grazing intensity. Changes in C and N mineralization resulted in a narrowing of CO 2 -C:net N min ratios with increasing grazing intensity. Grazing explained 31% of the variability in the ratio of CO 2 -C:net N min . The ratio of CO 2 -C:net N min was positively correlated with litter mass. Furthermore, there was a positive correlation between litter mass and A. frigida cover. Results suggest that as grazing intensity increases, microbes become more C limited resulting in decreased microbial growth and demand for N.

Journal of Range Management↗
USGS2007

Development of a soil conservation standard and guidelines for OHV recreation management in California

In 2004, the California State Parks (CSP) agency contracted with the California Geological Survey (CGS) to update the 1991 Soil Conservation Guide-lines/Standards for Off-Highway Vehicle (OHV) Recreation Management. Per state legislation, the 1991 standards were updated to establish a generic and measurable standard at least sufficient to allow restoration of OHV areas and trails. Given the rapid increase in OHV use in California, the updated Soil Conservation Standard and Guidelines for OHV Recreation Management also allowed for sustainability of trail systems and recreation opportunities. A key part of the update was interaction with stakeholders, agencies, and other interest groups through public workshops and a Consulting Agency Review Committee composed of representatives from the U.S. Natural Resources Conservation Service, U.S. Forest Service, U.S. Bureau of Land Management, U.S. Geological Survey, California Department of Conservation, and CSP. CGS also assessed proposed revisions in three representative OHV areas to ensure that the updated Standard and Guidelines provided sufficient flexibility to allow their application to all sites state-wide, ecosystems with multiple geology and soils types, and a variety of vehicle uses. While geology was not the only basis for the guideline revisions, it was a major factor. CGS staff also had the breadth of knowledge and experience in engineering geology, hydrogeology, road and trail construction, erosion control, and OHV riding necessary to coordinate and develop the multidisciplinary and multi-stakeholder effort.

Environmental & Engineering Geoscience↗