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USGS2001

Environmental quality and preservation; reefs, corals, and carbonate sands; guides to reef-ecosystem health and environment

Introduction In recent years, the health of the entire coral reef ecosystem that lines the outer shelf off the Florida Keys has declined markedly. In particular, loss of those coral species that are the building blocks of solid reef framework has significant negative implications for economic vitality of the region. What are the reasons for this decline? Is it due to natural change, or are human activities (recreational diving, ship groundings, farmland runoff, nutrient influx, air-borne contaminants, groundwater pollutants) a contributing factor and if so, to what extent? At risk of loss are biologic resources of the reefs, including habitats for endangered species in shoreline mangroves, productive marine and wetland nurseries, and economic fisheries. A healthy reef ecosystem builds a protective offshore barrier to catastrophic wave action and storm surges generated by tropical storms and hurricanes. In turn, a healthy reef protects the homes, marinas, and infrastructure on the Florida Keys that have been designed to capture a lucrative tourism industry. A healthy reef ecosystem also protects inland agricultural and livestock areas of South Florida whose produce and meat feed much of the United States and other parts of the world. In cooperation with the National Oceanic and Atmospheric Administration's (NOAA) National Marine Sanctuary Program, the U.S. Geological Survey (USGS) continues longterm investigations of factors that may affect Florida's reefs. One of the first steps in distinguishing between natural change and the effects of human activities, however, is to determine how coral reefs have responded to past environmental change, before the advent of man. By so doing, accurate scientific information becomes available for Marine Sanctuary management to understand natural change and thus to assess and regulate potential human impact better. The USGS studies described here evaluate the distribution (location) and historic vitality (thickness) of Holocene reefs in South Florida, relative to type of underlying bedrock morphology, and their varied natural response to rising sea level. These studies also assess movement and accumulation of sands, relative to direction of prevailing energy, and origin of the component sand grains. Geophysical data collected with highresolution sound-wave instruments that provide pictures of the sediment and bedrock are used to interpret sediment thickness. Reef thickness is determined by collecting limestone rock cores by drilling. Drill cores through reefs are used to identify the coral species that built them and to determine how reefs reacted to rising sea level. These data are supplemented by using isotope-dating techniques to derive the carbon-14 (C14) age of the corals and mangrove peat in the cores. Mangrove peat forms in very shallow water and at the shoreline but is found today buried beneath offshore reefs.

Open-File Report↗

USGS2020

Design and methods of the California stream quality assessment (CSQA), 2017

During 2017, as part of the National Water-Quality Assessment Project, the U.S. Geological Survey conducted the California Stream Quality Assessment to investigate the quality of streams in the Central California Foothills and Coastal Mountains ecoregion, United States. The goal of the California Stream Quality Assessment study was to assess the health of wadeable streams in the region by characterizing multiple water-quality factors that are stressors to aquatic biota and by evaluating the relation between these stressors and biological indicators of stream health. Urbanization, agriculture, and modifications to streamflow are anthropogenic changes that affect water quality in the region; consequently, the study design primarily targeted sites and specific stressors associated with these activities. For the study, 85 stream sites were selected to represent the types and intensity of land use in the watershed; categories of site types were undeveloped, urban (low, medium, high), agriculture (low, high), and mixed (urban and agriculture). Most sites (about 70 percent) represent a gradient of urbanization from undeveloped to 99-percent urbanized. At most of the sites, streamgages or pressure transducers were used to monitor stream discharge and stage, as well as temperature. Water-quality samples were collected routinely at all sites and were analyzed for major ions, organic contaminants, nutrients, and suspended sediment. Sampling frequency varied on the basis of site type and location. Discrete water samples were collected weekly and generally 6 times per site, except for 11 undeveloped sites that were sampled only 4 times (during the last 4 weeks). Water sampling began at sites in the southern part of the study on March 13, 2017, and at sites in the northern part of the study on April 3, 2017. Passive samplers were deployed at most sites for measurement of polar organic contaminants (pesticides and pharmaceuticals). In May 2017, coincident with completion of water-quality sampling, an ecological survey was conducted at each site to assess benthic algal and macroinvertebrate communities and instream habitat. During the ecological surveys, a single composite streambed-sediment sample was collected for chemical analysis and toxicity testing. In addition, a few focused studies were done at subsets of sites, namely, measuring pesticides using small-volume automated samplers, measuring pesticides in biofilms, and sampling suspended sediments using passive samplers. This report describes the various study components and methods of the California Stream Quality Assessment, including measurements of water quality, sediment chemistry, habitat assessments, and ecological surveys, as well as procedures for sample analysis, quality assurance and quality control, and data management.

California↗

USGS2015

Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

In 2002–03, the U.S. Geological Survey conducted a study of the geomorphic, flood, and groundwater-flow characteristics of five Bayfield Peninsula streams, Wisconsin (Cranberry River, Bark River, Raspberry River, Sioux River, and Whittlesey Creek) to determine the physical limitations for brook-trout habitat. The goals of the study were threefold: (1) to describe geomorphic characteristics and processes, (2) to determine how land-cover characteristics affect flood peaks, and (3) to determine how regional groundwater flow patterns affect base flow. The geomorphic characterization consisted of analyses of historical aerial photographs and General Land Office Survey notes, observations from helicopter video footage, surveys of valley cross sections, and coring. Sources of sediment were identified from the helicopter video and field surveys, and past erosion-control techniques were evaluated. Geomorphic processes, such as runoff sediment erosion, transport, and deposition, are driven by channel location within the drainage network, texture of glacial deposits, and proximity to postglacial lake shorelines; these processes have historically increased because of decreases in upland forest cover and channel roughness. Sources of sediment for all studied streams mainly came from bank, terrace, or bluff erosion along main stem reaches and along feeder tributaries that bisect main-stem entrenched valley sides. Bluff, terrace, and bank erosion were the major sources of sediment to Whittlesey Creek and the Sioux River. No active bluff erosion was observed on the Cranberry River or the Bark River but anecdotal information suggests that landslides occasionally happen on the Cranberry River. For the Bark River, sources of sediment were somewhat evenly divided among road crossings (bridges, culverts, and unimproved forest lanes), terrace erosion, bank erosion, and incision along upper main stems and feeder channels along valley sides. Evaluation of past erosion-control techniques indicated that bluffs were stabilized by a combination of artificial hardening and bioengineering of the bluff base and reducing mass wasting of the tops of the bluffs. Flood hydrographs for the Cranberry River were simulated for four land-cover scenarios—late 20th century (1992–93), presettlement (before 1870), peak agriculture (1928), and developed (25 percent urban). Results were compared to previous simulations of flood peaks for Whittlesey Creek and for North Fish Creek (southern adjacent basin to Whittlesey Creek). Even though most uplands are presently forested, flood peaks simulated for 1992–93 were 1.5 to 2 times larger than presettlement flood peaks. The increased flood peaks caused (1) increased incision along upper main stems and tributaries that bisect entrenched valley sides, (2) bluff and terrace erosion along reaches with entrenched valleys, (3) overbank deposition and bar formation in middle and lower main stems, and (4) aggradation in mouth areas. A base-flow survey was conducted and a groundwater-flow model was developed for the Bayfield Peninsula to delineate groundwater contributing areas. A deep aquifer system, which includes thick deposits of sand and the upper part of the bedrock, is recharged through the permeable sands in the center of the peninsula. Base flow is unevenly distributed among the Bayfield streams and depends on the amount of channel incision and the proximity of the channels to the recharge area and coarse outwash deposits. Groundwater contributing areas for the five streams do not coincide with surface-water-contributing areas. About 89 percent of total recharge to the deep aquifer system discharges to Bayfield streams; the remaining 11 percent directly discharges to Lake Superior. Historical land-cover changes have had negligible effects on groundwater-flow from the deep aquifer system. Available brook-trout habitat is dependent on the locations of groundwater upwellings, the sizes of flood peaks, and sediment loads. Management practices that focus on reducing or slowing runoff from upland areas and increasing channel roughness have potential to reduce flood peaks, erosion, and sedimentation and improve brook-trout habitat in all Bayfield Peninsula streams.

Wisconsin↗

USGS2010

Assessing the response of the Pamlico Sound, North Carolina, USA to human and climatic disturbances: Management implications

The Pamlico Sound (PS) with its sub-estuaries is the largest lagoonal ecosystem in the United States. It exhibits periodically strong salinity stratification and an average freshwater residence time of 1 year for the sound proper. This relatively long residence time promotes effective use and cycling of nutrients, allowing the system to support high rates of primary and secondary production, and serve as a vitally important fisheries nursery. This hydrologic characteristic also makes the system highly sensitive to nutrient over-enrichment and eutrophication. The PS is experiencing ecological change in response to increasing human activity and climatic perturbations. Human impacts include a rise in nutrient, sediment, and other pollutant loads that accompany urbanization and agricultural and industrial growth in its watersheds and airsheds. Since the mid-1990s, the PS has witnessed a sudden rise in tropical storm and hurricane impacts, with eight hurricanes and four tropical storms having made landfall in the PS watershed during the 1996 to 2007 period. Each of these storms had unique hydrologic, nutrient, and other pollutant loading effects. In addition, since the early 2000s, the region has experienced record droughts, which are continuing. Variable freshwater discharges from storms and droughts have caused large oscillations in nutrient enrichment, reflected ultimately in differential phytoplankton production, biomass, and community compositional responses. Floodwaters from the two wettest hurricanes, Fran (1996) and Floyd (1999), and from Tropical Storm Ernesto (2006) exerted long-term (months) effects on hydrology, nutrient loads, and algal production. Windy but relatively dry hurricanes, like Irene (1999) and Isabel (2003), caused strong vertical mixing, storm surges, but relatively minor changes in river flow, flushing, and nutrient loads. These contrasting effects are accompanied by biogeochemical (hypoxia, nutrient cycling) and habitat alterations, and associated food web disturbances. Each storm type influenced algal growth and compositional dynamics; however, their respective ecological impacts differed substantially. Changes in hydrologic and wind forcing resulting from changes in frequency and intensity of storms and droughts strongly influence water and habitat quality. These changes must be integrated with nutrient loading/dilution effects when assessing and predicting ecological responses to nutrient and hydrologic variability on this and other large lagoonal ecosystems.

North Carolina↗

USGS2023

Comprehensive inventory of habitat assessment and evaluation datasets to support Deepwater Horizon mesophotic and deep benthic communities

This report is part of the NOAA Mesophotic and Deep Benthic Communities (MDBC) Series of publications that share the results of work conducted by the Deepwater Horizon MDBC restoration projects. The 2010 Deepwater Horizon oil spill was an unprecedented event. Approximately 3.2 million barrels of oil were released into the deep ocean over nearly three months. The plume of oil moved throughout the water column, formed surface slicks that cumulatively covered an area the size of Virginia, and washed oil onto at least 1,300 miles of shoreline habitats. More than 770 square miles (2,000 square kilometers) of deep benthic habitat surrounding the Deepwater Horizon wellhead and 4-square miles of the Pinnacles mesophotic reef complex, located at the edge of the continental shelf, were injured by the oil spill. Under the Oil Pollution Act, state and federal natural resource trustees conducted a Natural Resource Damage Assessment (NRDA). The Trustees assessed damages, quantifying the unprecedented injuries to natural resources and lost services. They also developed a programmatic restoration plan to restore injured resources and compensate the public for lost services. In April 2016, a settlement was finalized that included up to $8.8 billion in funding for the Deepwater Horizon Trustees to restore the natural resource injuries caused by the oil spill as described in their programmatic restoration plan, Final Programmatic Damage Assessment and Restoration Plan and Final Programmatic Environmental Impact Statement. The Deepwater Horizon Open Ocean Trustee Implementation Group is responsible for restoring natural resources and their services within the Open Ocean Restoration Area that were injured by the oil spill. The Open Ocean Trustees include NOAA, Department of the Interior, U.S. Environmental Protection Agency, and U.S. Department of Agriculture. In 2019, the Open Ocean Trustee Implementation Group committed more than $126 million to implement four restoration projects to address the injury to MDBC. The MDBC projects are: mapping, Ground-truthing, and Predictive Habitat Modeling; Habitat Assessment and Evaluation; Coral Propagation Technique Development; and Active Management and Protection. NOAA and the Department of the Interior are implementing the projects, in cooperation with a range of partners, over eight years. Together, the projects take a phased approach to meet the challenges involved in restoring deep-sea habitats. Challenges to restoration include a limited scientific understanding of these communities, limited experience with restoration at the depths at which these communities occur, and remote locations that limit accessibility. More information about Deepwater Horizon restoration and the MDBC restoration projects is available at: www.gulfspillrestoration.noaa.gov.

Gulf of Mexico↗

USGS2023

Hydrogeology, karst, and groundwater availability of Monroe County, West Virginia

Monroe County is in southeastern West Virginia, encompassing an area of 474 square miles. The area consists of karst and siliciclastic aquifers of Ordovician, Silurian, Devonian, and Mississippian age and is in parts of two physiographic provinces: the Valley and Ridge Province to the east of Peters Mountain, and the Appalachian Plateau Province to the west of Peters Mountain. This study was developed in response to inquiries from the Monroe County Commission requesting assessment of the water resources of the county to better understand the quantity of the county’s groundwater resources, for both current [2023] and future demand, and to provide information to support protection and management of the county’s valuable groundwater resources. Various products were developed for this study that provide knowledge with respect to water availability and contamination susceptibility of the karst aquifers within the county. U.S. Geological Survey (USGS) geologists conducted extensive geologic mapping in support of the project, producing (1) a countywide bedrock geologic map, (2) a countywide hydrogeologic map, and (3) a light detection and ranging (lidar)-derived countywide digital elevation model and associated sinkhole map. A significant part of this work was to map in detail the Greenbrier Group at the formation level, which prior to this study had only partially been completed. The report also includes (4) a description of the lithologic units identified as part of the geologic mapping process. U.S. Geological Survey hydrologists completed several additional products for the hydrology part of the effort, including development of (1) a countywide potentiometric surface (water-table) map, (2) a countywide base-flow stream assessment, (3) countywide water-budget estimates, (4) well log surveys for 15 wells to better understand subsurface controls on groundwater flow within the study area, (5) two groundwater tracer tests to better refine the groundwater divide from the northern and southern parts of the karst aquifer in Monroe County; and finally, based on all available data collected for the study including the potentiometric surface map, geologic map, current [2023] and legacy fluorometric groundwater tracer tests, and base-flow stream assessments, (6) groundwater-basin delineations were reassessed for principal groundwater basins within the Greenbrier aquifer. In Monroe County, four principal hydrogeologic settings produce large yields of water for residential, agricultural, and other uses. The most relied upon water-bearing zone with respect to current [2023] public water supply is from springs along Peters Mountain. These springs are derived from intervals of fractured sandstone and resultant alluvial deposits. Groundwater flows downslope through these permeable alluvial deposits and discharges at the contact with less permeable strata, such as the Reedsville Shale. The second most relied upon water-bearing zone in Monroe County is within the karstic Greenbrier Group aquifer, in which the basal Hillsdale Limestone overlies the less permeable Maccrady Shale. This geologic contact between the Hillsdale Limestone and Maccrady Shale is not only targeted as a source of water for agricultural supply but also is targeted as a source of water for residential supply. The third most relied upon water-bearing zone is composed of shallow perched aquifers within the Greenbrier Group. The discontinuous nature of these perched aquifers makes mapping their extent impossible, but they are related to permeable geologic strata, such as karstified limestones with solutionally enhanced permeability that overlies less permeable shale or chert bedrock. During geologic mapping of the county, several of these perched aquifers were documented in the Pickaway, Union, and Alderson Limestones. A fourth zone consists of springs from Ordovician carbonates at the base of Peters Mountain, which are influenced by sinking streams as well as upwelling along faults. In terms of water quantity, the most sustainable springs are those having deeper-sourced flows. Public supplies are a principal source of water used for residential and commercial supply in the region, accounting for 0.49 million gallons per day (Mgal/d) of fresh-water withdrawals (0.14 Mgal/d of groundwater and 0.35 Mgal/d of surface water) for residential and commercial use and serving 6,645 individuals (49.2 percent of the population). An estimated 6,861 people, (50.8 percent of the population) primarily rely on private wells or other unregulated sources, such as springs, and withdraw 0.55 Mgal/d of groundwater for their residential use. Public water supply in the region is primarily (71.4 percent) derived from springs and augmented by stream withdrawals (backup sources mainly during low-flow periods), with the remaining portion (28.6 percent) derived from groundwater withdrawals from wells. For rural residents, however, 100 percent of their withdrawals are derived from groundwater (wells or springs).

West Virginia↗

USGS2005

Vegetation changes over 12 years in ungrazed and grazed Conservation Reserve Program Grasslands in the central and southern plains

The Conservation Reserve Program (CRP) established under the 1985 Food Security Act has the fundamental objectives of jointly providing economic support to segments of the agricultural community and conservation of natural resources (Osborn, 1997; Heard and others, 2000). Although soil loss on highly erodable lands was the principal natural resource conservation issue addressed in the 1985 CRP, improving water quality and wildlife habitat both became important considerations as the program evolved (Farmer and others, 1988). For example, Best and others (1997) found that production of young birds on CRP fields in the Midwest was ≥15 times the production on row-crop fields because of improved habitat. The increasing importance of wildlife habitat is reflected in continuing refinement of the Environmental Benefits Index (EBI) used by the U.S. Department of Agriculture (USDA) to quantify the potential benefits of enrolling lands in CRP (Osborn, 1997; Ribaudo and others, 2001). The refinements reflect input furnished by federal, state, and non-government organizations seeking greater wildlife habitat quality on CRP lands (Roseberry and David, 1994; Hughes and others, 1995; Millenbah and others, 1996; Patterson and Best, 1996; Rodgers, 1999; Allen and others, 2001). Refinement in the EBI has changed the types of grasses planted on newly enrolled land. In early CRP signups (1 through 11), 71% of new grassland acres were planted to introduced grasses and legumes [Conservation Practice (CP) 1] while 29% of the acres were planted to native grasses (CP2) (Osborn and others, 1992). By the 27th signup in July 2004, over 34.8 million acres (14 million ha) were enrolled in the CRP. More than 73% of these lands were planted to various mixtures of introduced (CP1) or native (CP2) grasses for a minimal contract period of 10 years (USDA, 2004). Continuation of grass plantings under the 2002 Farm Bill may result in CRP lands furnishing grass dominated cover for 20 or more consecutive years. The species of grass established in seeded grasslands can have a major influence on the potential quality of wildlife habitat where vegetation is maintained over a multi-year period. Different species of grass may have comparable abilities to alleviate soil erosion but furnish dissimilar qualities of wildlife habitat (fig. 1). For example, smooth brome, an introduced cool-season grass (grass species and scientific names are presented in table 1), is highly valued for its erosion control and forage attributes (Casler and Carlson, 1995). Switchgrass, a native warm-season grass, also is valued for its soil and water conservation qualities (Moser and Vogel, 1995) but provides greater benefits for some species of wildlife (Clubine, 1995). The quality of nesting and winter cover for ring-necked pheasants (Phasianus colchicus) furnished by smooth brome on northeastern Colorado CRP lands is inferior to that provided by the taller, more robust switchgrass (Allen, 1994). Characteristics of the agricultural landscape surrounding individual CRP fields also play a role in the wildlife habitat potential of CRP plantings (Weber and others, 2002; Nusser and others, 2004). of native and seeded grasslands change in response to the presence (and absence) of physical disturbances such as fire, grazing, tillage, and haying (Hobbs and Huenneke, 1992; Millenbah and others, 1996; Allen and others, 2001; Renfrew and Ribic, 2001; Swengel and Swengel, 2001). The perpetuation of diversity in species composition and vegetation structure following disturbance sustains desirable habitat for a variety of grassland-dependent wildlife (Hall and Willig, 1994; Barnes and others, 1995; King and Savidge, 1995; Granfors and others, 1996; Herkert and others, 1996; Kurzejeski, 1996; Patterson and Best, 1996; Klute and others, 1997). Undisturbed grasslands have lower grass and forb species diversity, greater amounts of dead plant material, decreased as well as seasonally delayed productivity, and diminished structural diversity of vegetation (Peet and others, 1975; Rice and Parenti, 1978; Butler and Briske, 1988; Campa and Winterstein, 1992). Recommendations for the timing of disturbance to increase grass and forb species diversity range from 3 to 8 years following establishment of seeded grasslands in the northern Great Plains and Midwest (Duebbert and others, 1981; Higgens, 1987; Millenbah and others, 1996). The management interval, however, is affected by climatic conditions, soils, grass species, and management history of the individual stand. We quantified changes in vegetation structure and species composition across the typical 10-year contract period in undisturbed southern and central Great Plains CRP fields (fig. 2) planted to introduced and native grasses. In addition, we compared changes in vegetation in fields grazed during the emergency release of 1996 by comparing conditions prior to grazing and two and four years post grazing relative to changes in similar fields that were not grazed. Documentation of long-term changes in vegetation structure and composition for fields planted to common grass seed mixtures across a wide range of environmental conditions provides information to improve long-term wildlife habitat potential, guide program administration, and define management practices that yield economic benefits to operators while still meeting wildlife and conservation objectives. Emergency grazing provisions of the CRP are controversial. Although grazing can alter vegetative characteristics and reduce habitat quality in the short-term (Temple and others, 1999), periodic disturbance may be necessary to maintain habitat quality, and more information is needed assessing long-term effects of emergency grazing on vegetative structure and species composition.

Conference Paper↗

USGS2011

Development of a flood-warning network and flood-inundation mapping for the Blanchard River in Ottawa, Ohio

Digital flood-inundation maps of the Blanchard River in Ottawa, Ohio, were created by the U.S. Geological Survey (USGS) in cooperation with the U.S. Department of Agriculture, Natural Resources Conservation Service and the Village of Ottawa, Ohio. The maps, which correspond to water levels (stages) at the USGS streamgage at Ottawa (USGS streamgage site number 04189260), were provided to the National Weather Service (NWS) for incorporation into a Web-based flood-warning Network that can be used in conjunction with NWS flood-forecast data to show areas of predicted flood inundation associated with forecasted flood-peak stages. Flood profiles were computed by means of a step-backwater model calibrated to recent field measurements of streamflow. The step-backwater model was then used to determine water-surface-elevation profiles for 12 flood stages with corresponding streamflows ranging from less than the 2-year and up to nearly the 500-year recurrence-interval flood. The computed flood profiles were used in combination with digital elevation data to delineate flood-inundation areas. Maps of the Village of Ottawa showing flood-inundation areas overlain on digital orthophotographs are presented for the selected floods. As part of this flood-warning network, the USGS upgraded one streamgage and added two new streamgages, one on the Blanchard River and one on Riley Creek, which is tributary to the Blanchard River. The streamgage sites were equipped with both satellite and telephone telemetry. The telephone telemetry provides dual functionality, allowing village officials and the public to monitor current stage conditions and enabling the streamgage to call village officials with automated warnings regarding flood stage and/or predetermined rates of stage increase. Data from the streamgages serve as a flood warning that emergency management personnel can use in conjunction with the flood-inundation maps by to determine a course of action when flooding is imminent.

Ohio↗

USGS2021

National Park Service Vegetation Mapping Inventory Program: Great Smoky Mountains National Park vegetation mapping project

The National Park Service (NPS) Vegetation Mapping Inventory (VMI) Program is an effort to classify, describe, and map existing vegetation communities in national park units throughout the United States. The NPS VMI Program is managed by the NPS Natural Resource Stewardship and Science Inventory and Monitoring Program and provides baseline vegetation information to natural resource managers, researchers, and ecologists. The U.S. Geological Survey Upper Midwest Environmental Sciences Center, NatureServe, and NPS Great Smoky Mountains National Park (GRSM, also referred to as the “Park”) have completed vegetation classification and mapping of GRSM, including the Foothills Parkway, for the NPS VMI Program. Mappers, ecologists, and botanists collaborated to affirm vegetation types of GRSM and to determine how best to map the vegetation types by using aerial imagery. A vegetation classification developed in 2003 by NatureServe and the NPS served as a foundation to further classify and map the vegetation types of the Park. Data from an additional 10 vegetation plots supported vegetation types either rare or not documented in the 2003 classification. Data from 203 verification sites were collected to test the field key to vegetation types and the application of vegetation types to a sample set of map polygons. Furthermore, data from 972 accuracy assessment (AA) sites were collected (of which 966 were used to test accuracy of the vegetation map layer). This GRSM vegetation mapping project identified 112 vegetation types consisting of 105 association types in the U.S. National Vegetation Classification (USNVC), 2 “park-special” types, 1 “map-special” type, and 4 cultural types in the USNVC. To map the vegetation and land cover of GRSM, 52 map classes were developed. Of these 52 map classes, 46 represent natural (including ruderal) vegetation types, most of which types are recognized in the USNVC. For the remaining 6 of the 52 map classes, 4 represent USNVC cultural types for agricultural and developed areas, and 2 represent non-USNVC types for nonvegetated open water and nonvegetated rock. Features were interpreted from viewing four-band digital aerial imagery using digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems; digital aerial imagery was collected during September 23–October 30, 2015. The interpreted data were digitally and spatially referenced, thus making the spatial-database layers usable in a geographic information system. Polygon units were mapped to either a 0.5- or 0.25- hectare (ha) minimum mapping unit, depending on vegetation type. A geodatabase containing several feature-class layers and tables provides the locations and data of USNVC vegetation types (vegetation map layer), vegetation plots, verification sites, AA sites, project boundary extent, and aerial image centers and flight lines. Covering 210,875 ha, the feature-class layer and related tables for the vegetation map layer provide 34,084 polygons of detailed attribute data when special modifiers are not considered (average polygon size of 6.2 ha) and 36,589 polygons of detailed attribute data when special modifiers are considered (average polygon size of 5.8 ha). Each map polygon is assigned a map-class code and name and, when applicable, are linked to USNVC classification tables within the geodatabase. The vegetation map extent includes the administrative boundary for GRSM and the Foothills Parkway. A summary report, generated from the vegetation map layer, concludes that the 46 map classes representing natural (including ruderal) vegetation types apply to 99.2% of polygons (33,797 polygons; average size of 6.2 ha) and cover 98.6% of the Park (207,971.4 ha). Further broken down, map classes representing natural vegetation types indicate that the Park is 97.7% forest and woodland (205,882.5 ha), 0.6% shrubland (1,174.6 ha), and 0.4% herbaceous (914.3 ha). Map classes representing cultural vegetation types apply to 0.8% of polygons (259 polygons; average size of 4.9 ha) and cover 0.6% of the Park (1,277.4 ha). Map classes representing nonvegetation open and flowing water and unvegetated rock apply to 0.08% of polygons (28 polygons; average size of 58.1 ha) and cover 0.8% of the Park (1,625.9 ha). A thematic AA study was completed of map classes representing the natural (including ruderal) vegetation types of the Park. Initial AA results were discussed with NPS staff from the Park. Following input from NPS staff on how to handle map classes that fell below accuracy standards, adjustments were made to the vegetation map layer. Final results indicate an overall accuracy of 80.64% (kappa index of 79.96% for chance agreements) based on data from 966 of the 972 AA sites. Most individual map-class themes exceed the NPS VMI Program standard of 80% with a 90% confidence interval. The GRSM vegetation mapping project delivers many geospatial and vegetation data products, including an in-depth project report discussing methods and results, which includes map classification and map-class descriptions. This suite of products also includes descriptions and a field key to vegetation types; a database of vegetation plots, verification sites, and AA sites; digital images of field sites; field data sheets; digital aerial imagery; hardcopy and digital maps; a geodatabase of vegetation and land cover (map layer), field sites (vegetation plots, verification sites, and AA sites), aerial imagery index, project boundary, and metadata; and a contingency table listing AA results. Geospatial products are projected in the Universal Transverse Mercator, Zone 17 North, by using the North American Datum of 1983. Information on the NPS VMI Program and completed mapping projects are on the internet at https://www.nps.gov/im/vegetation-inventory.htm.

North Carolina, Tennessee↗

USGS2010

The use of scenario analysis to assess water ecosystem services in response to future land use change in the Willamette River Basin, Oregon

Human pressures on the natural resources of the United States have resulted in many unintended changes in our ecosystems, e.g., loss of biodiversity, habitat degradation, increases in the number of endangered species, and increases in contamination and water pollution. Environmental managers are concerned about broad-scale changes in land use and landscape pattern and their cumulative impact on hydrologic and ecological processes that affect stream conditions. The type of land use and land cover has direct consequences for most ecosystem services, including water quantity and water quality, erosion control, and biodiversity. As human pressure continues to increase, ecosystem services worldwide are projected to suffer continued loss and degradation, thus reducing the capacity of ecosystems to provide essential goods and services that contribute to human well-being (MEA 2005). The ability to assess, report, and forecast the life support functions of ecosystems is absolutely critical to our capacity to make informed decisions which will maintain the sustainable nature of our environmental services and secure these resources into the future. This study presents an integrated approach to identify areas with potential water quality problems as a result of land cover change projected by stakeholders within a moderately large river basin in the Pacific Northwest (USA). A process-based hydrologic watershed model was used to examine the contribution of land use/land cover to sediment yield, and nitrate and phosphorous loadings, and identify subwatersheds within the Willamette River basin that would be most affected in the year 2050 relative to three possible future scenarios which include inherent differences related to conservation, existing planning trends, and open development. Thus, the objective of this study was to evaluate the effects of alternative future scenarios that describe varying degrees of urban development and human use on hydrological response related to water quality. Results of this study suggest that the amount of forest along streams and agriculture consistently explained a high percentage of variation in nutrients. The AGWA-SWAT model was used to simulate change in sediment yield, nitrate and phosphorus transported with surface runoff for the three future scenarios. With regard to nitrate, the greatest increase was associated with subwatersheds with agricultural land use and urban areas. Although the model predicted some improvement in basin headwaters for all scenarios, nitrate loadings are expected to decrease under the conservation scenario. The largest decrease was observed in the Coast Range. With regard to phosphorous loadings, the lowest reduction was observed in subwatersheds draining predominantly forest areas. The greatest increase was observed under the open development scenario in subwatersheds with agricultural land use. Urbanization and agriculture are presumed to be the major environmental stressors affecting watershed condition of the Willamette River Basin.

Oregon↗

USGS2026

DRIFteRS: A dataset of drift invertebrate densities in streams and rivers across western North America, 1997–2024

Prey availability is among the most influential and highly variable determinants of fish growth and freshwater habitat carrying capacity, yet it remains understudied compared to physical habitat variables (Ouellet et al., 2025; Rosenfeld et al., 2014; Weber et al., 2017). We often lack a clear understanding of how much food is available to fishes, how it varies spatially and temporally, and how it influences responses to restoration (Ouellet et al., 2025; Rossi et al., 2024; Wipfli et al., 2010). Drift invertebrates—the primary food source for juvenile salmonids and other drift-foraging fishes—play a pivotal role in these dynamics. To better understand the spatiotemporal variability of drift invertebrate abundance and biomass across the freshwater range of drift-feeding salmonids in western North America, we compiled the DRift Invertebrates For salmonids in River Systems (DRIFteRS) dataset. The dataset encompasses 6125 samples of drift invertebrates, and, for a subset of drift samples, associated benthic invertebrate density data, collected from 1360 reaches on 459 unique rivers and streams spanning 55 river basins considered hydrologically independent (i.e., not nested within the same larger watershed) across British Columbia, Canada, and the U.S. states of Alaska, Arizona, California, Colorado, Idaho, Nevada, New Mexico, Oregon, Utah, Washington, and Wyoming. Sample sites represent a diverse array of river and stream habitats (e.g., headwater, mainstem, side channel), in watersheds with diverse land uses (e.g., urban, wilderness, agricultural), and disturbance histories (e.g., fire, restoration). Collected between 1997 and 2024, the data span the full calendar year and capture daily and seasonal patterns in drift abundance and biomass densities. When paired with water quality and quantity data as well as remotely sensed environmental landscape data, such as land use/land cover, climate, and disturbance history, channel morphology, and riparian vegetation composition, the DRIFteRS dataset can aid in identifying key drivers of drift invertebrate densities and mean body size and support predictive modeling in unsampled locations and times. The dataset may also be used to analyze aquatic-terrestrial resource flows, derive prey-encounter rates and profitability (mean prey size), and inform broader investigations of sit-and-wait foraging ecology, especially when paired with data on drift-foraging predators. For salmonid-focused applications, the dataset can be integrated into habitat evaluation models, including bioenergetic (e.g., Naman et al., 2019) and life cycle models (e.g., Beechie et al., 2023), to improve estimates of habitat capacity and population dynamics for river- and stream-rearing salmonids. Understanding prey availability dynamics is increasingly important, because rising water temperatures increase salmonid metabolic demands (Crozier et al., 2010). Flow regime transitions (i.e., snow or glacier dominated to rain dominated; Beechie et al., 2013), wildfire frequency and intensity (Hessburg et al., 2021), as well as plant community and phenology shifts (Cleland et al., 2007; Franklin et al., 2016) are all predicted to change with rising temperatures and are potential drivers of terrestrial and aquatic invertebrate prey quality and availability in lotic systems. These insights can ultimately inform restoration prioritization and design, helping managers consider food resource implications when evaluating restoration priorities and match habitat improvement to food supply. The data are released under the Creative Commons Attribution 4.0 International license and may be reused with attribution.

Alaska, Arizona, British Columbia, California, Col↗

USGS2013

U.S. Geological Survey environmental health science strategy — Providing environmental health science for a changing world

Executive Summary America has an abundance of natural resources. We have bountiful clean water, fertile soil, and unrivaled national parks, wildlife refuges, and public lands. These resources enrich our lives and preserve our health and wellbeing. These resources have been maintained because of our history of respect for their value and an enduring commitment to their vigilant protection. Awareness of the social, economic, and personal value of the health of our environment is increasing. The emergence of environmentally driven diseases caused by exposure to contaminants and pathogens is a growing concern worldwide. New health threats and patterns of established threats are affected by both natural and anthropogenic changes to the environment. Human activities are key drivers of emerging (new and re-emerging) health threats. Societal demands for land and natural resources, quality of life, and economic prosperity lead to environmental change. Natural earth processes, climate trends, and related climatic events will compound the environmental impact of human activities. These environmental drivers will influence exposure to disease agents, including viral, bacterial, prion, and fungal pathogens, parasites, synthetic chemicals and substances, natural earth materials, toxins, and other biogenic compounds. The U.S. Geological Survey (USGS) defines environmental health science broadly as the interdisciplinary study of relations among the quality of the physical environment, the health of the living environment, and human health. The interactions among these three spheres are driven by human activities, ecological processes, and natural earth processes; the interactions affect exposure to contaminants and pathogens and the severity of environmentally driven diseases in animals and people. This definition provides USGS with a framework for synthesizing natural science information from across the Bureau and providing it to environmental, natural resource, agricultural, and public health managers. USGS specializes in science at the environment-health interface, by characterizing the processes that affect the interaction among the physical environment, the living environment, and people, and the resulting factors that affect ecological and human exposure to disease agents. The USGS is a Federal science agency with a broad range of natural science expertise relevant to environmental health. USGS provides scientific information and tools as a scientific basis for management and policy decisionmaking. This report describes a 10-year strategy that encompasses the portfolio of USGS environmental health science. It summarizes national environmental health priorities that USGS is best suited to address, and will serve as a strategic framework for USGS environmental health science goals, actions, and outcomes for the next decade. Implementation of this strategy is intended to aid coordination of USGS environmental health activities and to provide a focal point for disseminating information to stakeholders. The “One Health” paradigm advocated by the World Health Organization (WHO; World Health Organization, 2011), and the American Veterinary Medical Association (AVMA; American Veterinary Medical Association, 2008), among others, is based on a general recognition that the health of humans, animals, and the environment are inextricably linked. Thus, successful efforts to protect that health will require increased interdisciplinary research and increased communication and collaboration among the broader scientific and health community. This strategy is built upon that paradigm.

Circular↗

USGS2026

Evaluating treatment methods to control the egg masses of the crop pest Pomacea maculata

Pomacea maculata is an invasive aquatic apple snail species that poses serious ecological, agricultural, and public health threats across the southeastern United States. Its spread, particularly in Louisiana, has heavily impacted rice and crayfish farming, an industry producing over 90% of U.S. crayfish and valued at more than $250 million annually. The snail damages seedling rice, clogs crayfish traps, reduces yields, and increases labor for farmers. Moreover, it is a known host of rat lungworm ( Angiostrongylus cantonensis ), a parasite harmful to humans, making its presence in food production environments a public health concern. Controlling P. maculata is challenging due to its life cycle and reproductive strategies. The species lays large clutches of eggs above the waterline, where traditional aquatic molluscicides are ineffective. This study aimed to assess low-cost, practical methods for reducing egg hatch rates, specifically water submersion and vegetable oil application, on newly laid (day 1) and older (day 7) egg clutches. Laboratory trials on 125 egg clutches revealed that water submersion significantly reduced hatch rates and the development of dormant hatchlings, regardless of clutch age. Oil treatment only reduced hatch rates for day 1 clutches and had no effect on dormant hatchlings. These results suggest that water treatment is more broadly effective and feasible for farmers to apply without needing to determine egg age when applied on a routine, weekly basis. While oil showed limited use, its time-sensitive application limits practicality in the field. Water-based approaches offer a scalable solution for reducing P. maculata populations, but do not completely eliminate the potential for hatching and spreading. Without comprehensive control strategies targeting all life stages, the apple snail’s spread and associated impacts are expected to worsen, underscoring the urgency of continued management innovation.

Florida↗

USGS2017

Unexpected stasis in a changing world: Lake nutrient and chlorophyll trends since 1990

The United States (U.S.) has faced major environmental changes in recent decades, including agricultural intensification and urban expansion, as well as changes in atmospheric deposition and climate—all of which may influence eutrophication of freshwaters. However, it is unclear whether or how water quality in lakes across diverse ecological settings has responded to environmental change. We quantified water quality trends in 2913 lakes using nutrient and chlorophyll (Chl) observations from the Lake Multi-Scaled Geospatial and Temporal Database of the Northeast U.S. (LAGOS-NE), a collection of preexisting lake data mostly from state agencies. LAGOS-NE was used to quantify whether lake water quality has changed from 1990 to 2013, and whether lake-specific or regional geophysical factors were related to the observed changes. We modeled change through time using hierarchical linear models for total nitrogen (TN), total phosphorus (TP), stoichiometry (TN:TP), and Chl. Both the slopes (percent change per year) and intercepts (value in 1990) were allowed to vary by lake and region. Across all lakes, TN declined at a rate of 1.1% year −1 , while TP, TN:TP, and Chl did not change. A minority (7%–16%) of individual lakes had changing nutrients, stoichiometry, or Chl. Of those lakes that changed, we found differences in the geospatial variables that were most related to the observed change in the response variables. For example, TN and TN:TP trends were related to region-level drivers associated with atmospheric deposition of N; TP trends were related to both lake and region-level drivers associated with climate and land use; and Chl trends were found in regions with high air temperature at the beginning of the study period. We conclude that despite large environmental change and management efforts over recent decades, water quality of lakes in the Midwest and Northeast U.S. has not overwhelmingly degraded or improved.

Global Change Biology↗

USGS2003

Availability and distribution of base flow in lower Honokohau Stream, Island of Maui

Honokohau Stream is one of the few perennial streams in the Lahaina District of West Maui. Current Honokohau water-use practices often lead to conflicts among water users, which are most evident during periods of base flow. To better manage the resource, data are needed that describe the availability and distribution of base flow in lower Honokohau Stream and how base flow is affected by streamflow diversion and return-flow practices. Flow-duration discharges for percentiles ranging from 50 to 95 percent were estimated at 13 locations on lower Honokohau Stream using data from a variety of sources. These sources included (1) available U.S. Geological Survey discharge data, (2) published summaries of Maui Land & Pineapple Company, Inc. diversion and water development-tunnel data, (3) seepage run and low-flow partial-record discharge measurements made for this study, and (4) current (2003) water diversion and return-flow practices. These flow-duration estimates provide a detailed characterization of the distribution and availability of base flow in lower Honokohau Stream. Estimates of base-flow statistics indicate the significant effect of Honokohau Ditch diversions on flow in the stream. Eighty-six percent of the total flow upstream from the ditch is diverted from the stream. Immediately downstream from the diversion dam there is no flow in the stream 91.2 percent of the time, except for minor leakage through the dam. Flow releases at the Taro Gate, from Honokohau Ditch back into the stream, are inconsistent and were found to be less than the target release of 1.55 cubic feet per second on 9 of the 10 days on which measurements were made. Previous estimates of base-flow availability downstream from the Taro Gate release range from 2.32 to 4.6 cubic feet per second (1.5 to 3.0 million gallons per day). At the two principal sites where water is currently being diverted for agricultural use in the valley (MacDonald's and Chun's Dams), base flows of 2.32 cubic feet per second (1.5 million gallons per day) are available more than 95 percent of the time at MacDonald's Dam and 80 percent of the time at Chun's Dam. Base flows of 4.6 cubic feet per second (3.0 million gallons per day) are available 65 and 56 percent of the time, respectively. A base-flow water-accounting model was developed to estimate how flow-duration discharges for 13 sites on Honokohau Stream would change in response to a variety of flow release and diversion practices. A sample application of the model indicates that there is a 1 to 1 relation between changes in flow release rates at the Taro Gate and base flow upstream from MacDonald's Dam. At Chun's Dam the relation between Taro Gate releases and base flow varies with flow-duration percentiles. At the 95th and 60th percentiles, differences in base flow at Chun's Dam would equal about 50 and 90 percent of the change at the Taro Gate.

Hawaii↗

USGS1985

Mallard recruitment in the agricultural environment of North Dakota

Recruitment of a mallard (Anas platyrhynchos) population was assessed on a 10,041-km2 study area in central North Dakota during 1977-80. We equipped 338 hens with radio transmitters and monitored them during the breeding season. Two hundred thirty-five of these hens furnished data reported here. Habitat use, nest site selection, fate of nests, and the rate of renesting were measured. Survival of hens during April-September and survival of young were determined. There was a high negative correlation between nest initiation date and mean April or May temperature. Hens selected nest sites most frequently in grassland and least frequently in cropland, but habitat use compared to availability indicated preference for road right-of-way and odd areas of cover and rejection of cropland. Use of other habitats was in proportion to their availability. Nest success was only 8% during the study. Hen success, a function of nest success and renesting rate, averaged 15% and varied among years because of increased renesting in wet years. In all years, 2-year-old and older hens were twice as successful as first-year nesters. Nesting effort was correlated with water conditions as derived from aerial photographs. April-September survival of hens averaged 80% because predation was heavy when hens were on nests. Only 74% of the hens that hatched a clutch were observed later with at least 1 surviving duckling. On average, hens in the spring population recruited only 0.27 young females to the fall population. Based on this recruitment estimate, published survival estimates and a model previously developed for a closed population, we predict a 20% annual population decline. Nest success of 15% and a resulting hen success of 31% would be required for a stable population. The results suggest that the population on the study area is not maintaining itself but is being supplemented by pioneering birds. A serious recruitment problem has resulted from nest predation. Additional research is needed to determine the geographic extent of the problem. If the problem is widespread, management techniques must be devised to overcome nest destruction, mortality of hens, and mortality of ducklings.

Wildlife Monographs↗

USGS1994

Hydrogeology and potential effects of changes in water use, Carson Desert agricultural area, Churchill County, Nevada

Operating Criteria and Procedures established in 1988 for delivery of water for irrigation in the Newlands Project area include regulations and methods to increase Project efficiency. Public Law 101-618 of 1990 includes a target of 75-percent Project efficiency and a program of water-rights acquisition for wetlands maintenance. The directives could result in large reductions in water used for irrigation in the Carson Desert, potentially affecting ground-water supplies. Previous studies of the area have been evaluated to determine the current understanding of how aquifers are recharged, what controls the flow and quality of ground water, potential effects of changes in water use, and what additional information would be needed to quantify further changes in water use. Inflow of surface water to the basin from Lahontan Reservoir averaged about 370,000 acre-ft/yr (acre-feet per year) from 1975 to 1992, supplying water for irrigation of more than 50,000 acres. More than half of the water released from the reservoir is lost to seepage, operational spills, and evaporation before delivery of about 170,000 acre-ft/yr to farm headgates. The volume of water delivered to farms that does not contribute to crop consumptive use (on-farm loss) is poorly known but could be as much as 60,000 acre-ft/yr. Consumptive use on irrigated land may be about 180,000 acre-ft/yr, of which 50,000 acre-ft/yr may be derived from the shallow aquifer. Outflow from irrigated land is a mixture of operational spill, runoff from irrigated fields, and ground-water seepage to drains. Total outflow averages about 170,000 to 190,000 acre-ft/yr. This water flows to wetlands at Carson Lake, Stillwater Wildlife Management Area, and Carson Sink. Three sedimentary aquifers were previously defined in the basin: a shallow aquifer having highly variable lithology and water quality, an intermediate aquifer containing principally fresh water, and a deep aquifer having water of poor quality. The deep aquifer could possibly be divided into sedimentary and volcanic zones. In addition, a near-surface zone may exist near the top of the shallow aquifer where vertical flow is inhibited by underlying clay beds. A basalt aquifer near the center of the basin is the source of public supply and is recharged by the shallow, intermediate, and deep aquifers. Water levels in the basalt aquifer have declined about 10 feet from pre-pumping levels, and chloride and arsenic concentrations in the water have increased. The average depth to ground water has decreased beneath large areas of the Carson Desert since 1904 as a result of recharge of surface water used for irrigation. Ground water generally flows from west to east, and dissolvedsolids concentrations increase greatly near areas of ground-water discharge, where State of Nevada drinking-water standards commonly are exceeded. Uncertainties in the rates of recharge to and discharge from the basin cause an imbalance in the calculated water budget. Estimates for total recharge range from 400,000 to 420,000 acreft/yr, whereas estimates for discharge range from 630,000 to 680,000 acre-ft/yr. Estimates of inflow to and outflow from aquifers of the study area are as follows: shallow aquifer, more than 120,000 acre-ft/yr; intermediate aquifer, possibly more than 25,000 acre-ft/yr; deep aquifer, unknown; and basalt aquifer, about 4,000 acre-ft/yr. Estimates for flow volumes to and from the shallow and intermediate aquifers are based on assumed aquifer properties and could be in error by an order of magnitude or more. Conceptual models of the basin show that ground-water flow is downward from the shallow aquifer to the intermediate aquifer in the western part and near the center of the basin, and is upward in the eastern part of the basin. Little is known about flow in the deep aquifer. Nearsurface clay beds inhibit vertical flow near the center and eastern part of the basin except where breached by relict sand-filled channels of the Carson River. Conceptual models of the basin show that changes in water use in the western part of the basin probably would affect recharge to the sedimentary and basalt aquifers. Near the center of the basin, water-use changes could affect the shallow and basalt aquifers but might have less effect on the intermediate aquifer. In the eastern part of the basin, changes could affect the shallow aquifer, but would probably not affect the intermediate or basalt aquifers. If seepage is decreased by lining canals, and land is removed from production, water-level declines in the shallow aquifer could be greater than 10 feet as far as 2 miles from the lined canals. Depending upon the distribution of specific yield, decreasing recharge by 25,000 to 50,000 acre-ft/yr beneath 30,000 acres could cause water levels to decline from 4 to 17 feet. Where ground water supplements crop consumptive use, water levels could temporarily rise when land is removed from production. Where water is pumped from a near-surface zone of the shallow aquifer, water-level declines might not greatly affect pumped wells where the nearsurface zone is thickest, but could cause wells to go dry where the zone is thin. The understanding of surface-water and ground-water relations, recharge and discharge of ground water, ground-water movement, and the potential effects of changes in water use in the Carson Desert can be refined by studying (1) the extent of potable water in the intermediate and basalt aquifers, (2) lithology and specific yield of aquifer materials, (3) data on ground-water levels and quality, and (4) data on surface-water flow and quality, as well as monitoring the effects of changes in water use as they take place.

Nevada↗

USGS2007

A comparison of protocols and observer precision for measuring physical stream attributes

Stream monitoring programs commonly measure physical attributes to assess the effect of land management on stream habitat. Variability associated with the measurement of these attributes has been linked to a number of factors, but few studies have evaluated variability due to differences in protocols. We compared six protocols, five used by the U.S. Department of Agriculture Forest Service and one by the U.S. Environmental Protection Agency, on six streams in Oregon and Idaho to determine whether differences in protocol affect values for 10 physical stream attributes. Results from Oregon and Idaho were combined for groups participating in both states, with significant differences in attribute means for 9 out of the 10 stream attributes. Significant differences occurred in 5 of 10 in Idaho, and 10 of 10 in Oregon. Coefficients of variation, signal-to-noise ratio, and root mean square error were used to evaluate measurement precision. There were differences among protocols for all attributes when states were analyzed separately and as a combined dataset. Measurement differences were influenced by choice of instruments, measurement method, measurement location, attribute definitions, and training approach. Comparison of data gathered by observers using different protocols will be difficult unless a core set of protocols for commonly measured stream attributes can be standardized among monitoring programs.

Idaho, Oregon↗