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USGS2020

A novel approach for next generation water use mapping using Landsat and Sentinel-2 satellite data

Evapotranspiration (ET) is needed in a range of applications in hydrology, climatology, ecology, and agriculture. Remote sensing-based estimation is the only viable and economical method for ET estimation over large areas. The current Landsat satellites provide images every 16 days limiting the ability to capture biophysical changes affecting ET. Thus, we explored the potential integration of Landsat 8 and Sentinel-2 data for estimating ET using a surface energy balance model. The results indicate the proposed Landsat-Sentinel data fusion approach substantially reduced relative errors from 48% to 10% on area-wide and from 49% to 17% on pixel-wide compared to linear interpolation between two Landsat images. The proposed approach had a better agreement with expected actual ET maps across high-vegetation conditions than in low-vegetation conditions. The finer temporal resolution and better accuracy of ET maps based on Landsat-Sentinel integration is of great importance in managing limited water resources.

Arizona, California↗

USGS2017

Extracting accurate and precise topography from LROC narrow angle camera stereo observations

The Lunar Reconnaissance Orbiter Camera (LROC) includes two identical Narrow Angle Cameras (NAC) that each provide 0.5 to 2.0 m scale images of the lunar surface. Although not designed as a stereo system, LROC can acquire NAC stereo observations over two or more orbits using at least one off-nadir slew. Digital terrain models (DTMs) are generated from sets of stereo images and registered to profiles from the Lunar Orbiter Laser Altimeter (LOLA) to improve absolute accuracy. With current processing methods, DTMs have absolute accuracies better than the uncertainties of the LOLA profiles and relative vertical and horizontal precisions less than the pixel scale of the DTMs (2–5 m). We computed slope statistics from 81 highland and 31 mare DTMs across a range of baselines. For a baseline of 15 m the highland mean slope parameters are: median = 9.1°, mean = 11.0°, standard deviation = 7.0°. For the mare the mean slope parameters are: median = 3.5°, mean = 4.9°, standard deviation = 4.5°. The slope values for the highland terrain are steeper than previously reported, likely due to a bias in targeting of the NAC DTMs toward higher relief features in the highland terrain. Overlapping DTMs of single stereo sets were also combined to form larger area DTM mosaics that enable detailed characterization of large geomorphic features. From one DTM mosaic we mapped a large viscous flow related to the Orientale basin ejecta and estimated its thickness and volume to exceed 300 m and 500 km 3 , respectively. Despite its ∼3.8 billion year age the flow still exhibits unconfined margin slopes above 30°, in some cases exceeding the angle of repose, consistent with deposition of material rich in impact melt. We show that the NAC stereo pairs and derived DTMs represent an invaluable tool for science and exploration purposes. At this date about 2% of the lunar surface is imaged in high-resolution stereo, and continued acquisition of stereo observations will serve to strengthen our knowledge of the Moon and geologic processes that occur across all of the terrestrial planets.

Icarus↗

USGS2008

Magnetic monitoring of earth and space

For centuries, navigators of the world’s oceans have been familiar with an effect of Earth’s magnetic field: It imparts a directional preference to the needle of a compass. Although in some settings magnetic orientation remains important, the modern science of geomagnetismhas emerged from its romantic nautical origins and developed into a subject of great depth and diversity. The geomagnetic field is used to explore the dynamics of Earth’s interior and its surrounding space environment, and geomagnetic data are used for geophysical mapping, mineral exploration, risk mitigation, and other practical applications. A global distribution of ground-based magnetic observatories supports those pursuits by providing accurate records of the magnetic-field direction and intensity at fixed locations and over long periods of time. Magnetic observatories were first established in the early 19th century in response to the influence of Alexander von Humboldt and Carl Friedrich Gauss. Since then, magnetic measurement has advanced significantly, progressing from simple visual readings of magnetic survey instruments to include automatic photographic measurement and modern electronic acquisition. To satisfy the needs of the scientific community, observatories are being upgraded to collect data that meet ever more stringent standards, to achieve higher acquisition frequencies, and to disseminate data in real time. To appreciate why data from magnetic observatories can be used for so many purposes, one needs only to recall that the geomagnetic field is a continuum, connecting the different parts of Earth to each other and to nearby space. Beneath our feet and above our heads, electric currents generate magnetic fields that contribute to the totality of the geomagnetic field measured at an observatory on Earth’s surface. The many physical processes that operate in each geophysical domain give rise to a complicated field that exhibits a wide variety of time-dependent behavior. In this article I review the status of the global community of magnetic observatories, show how Earth and space can be monitored for purposes of scientific understanding and practical application, and highlight the role played by magnetic observatories in the history of geomagnetism research.

Physics Today↗

USGS2015

Climate change and vulnerability of bull trout (Salvelinus confluentus) in a fire-prone landscape.

Linked atmospheric and wildfire changes will complicate future management of native coldwater fishes in fire-prone landscapes, and new approaches to management that incorporate uncertainty are needed to address this challenge. We used a Bayesian network (BN) approach to evaluate population vulnerability of bull trout ( Salvelinus confluentus ) in the Wenatchee River basin, Washington, USA, under current and future climate and fire scenarios. The BN was based on modeled estimates of wildfire, water temperature, and physical habitat prior to, and following, simulated fires throughout the basin. We found that bull trout population vulnerability depended on the extent to which climate effects can be at least partially offset by managing factors such as habitat connectivity and fire size. Moreover, our analysis showed that local management can significantly reduce the vulnerability of bull trout to climate change given appropriate management actions. Tools such as our BN that explicitly integrate the linked nature of climate and wildfire, and incorporate uncertainty in both input data and vulnerability estimates, will be vital in effective future management to conserve native coldwater fishes.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2005

Topographic, bioclimatic, and vegetation characteristics of three ecoregion classification systems in North America: Comparisons along continent-wide transects

Ecoregion classification systems are increasingly used for policy and management decisions, particularly among conservation and natural resource managers. A number of ecoregion classification systems are currently available, with each system defining ecoregions using different classification methods and different types of data. As a result, each classification system describes a unique set of ecoregions. To help potential users choose the most appropriate ecoregion system for their particular application, we used three latitudinal transects across North America to compare the boundaries and environmental characteristics of three ecoregion classification systems [Ku??chler, World Wildlife Fund (WWF), and Bailey]. A variety of variables were used to evaluate the three systems, including woody plant species richness, normalized difference in vegetation index (NDVI), and bioclimatic variables (e.g., mean temperature of the coldest month) along each transect. Our results are dominated by geographic patterns in temperature, which are generally aligned north-south, and in moisture, which are generally aligned east-west. In the west, the dramatic changes in physiography, climate, and vegetation impose stronger controls on ecoregion boundaries than in the east. The Ku??chler system has the greatest number of ecoregions on all three transects, but does not necessarily have the highest degree of internal consistency within its ecoregions with regard to the bioclimatic and species richness data. In general, the WWF system appears to track climatic and floristic variables the best of the three systems, but not in all regions on all transects. ?? 2005 Springer Science+Business Media, Inc.

Environmental Management↗

USGS1998

Review of magnetic field monitoring near active faults and volcanic calderas in California: 1974-1995

Differential magnetic fields have been monitored along the San Andreas fault and the Long Valley caldera since 1974. At each monitoring location, proton precession magnetometers sample total magnetic field intensity at a resolution of 0.1 nT or 0.25 nT. Every 10 min, data samples are transmitted via satellite telemetry to Menlo Park, CA for processing and analysis. The number of active magnetometer sites has varied during the past 21 years from 6 to 25, with 12 sites currently operational. We use this network to identify magnetic field changes generated by earthquake and volcanic processes. During the two decades of monitoring, five moderate earthquakes (M5.9 to M7.3) have occurred within 20 km of magnetometer sites located along the San Andreas fault and only one preseismic signal of 1.5 nT has been observed. During moderate earthquakes, coseismic magnetic signals, with amplitudes from 0.7 nT to 1.3 nT, have been identified for 3 of the 5 events. These observations are generally consistent with those calculated from simple seismomagnetic models of these earthquakes and near-fault coseismic magnetic field disturbances rarely exceed one nanotesla. These data are consistent with the concept of low shear stress and relatively uniform displacement of the San Andreas fault system as expected due to high pore fluid pressure on the fault. A systematic decrease of 0.8-1 nT/year in magnetic field has occurred in the Long Valley caldera since 1989. These magnetic field data are similar in form to observed geodetically measured displacements from inflation of the resurgent dome. A simple volcanomagnetic model involving pressure increase of 50 MPa/a at a depth of 7 km under the resurgent dome can replicate these magnetic field observations. This model is derived from the intrusion model that best fits the surface deformation data. ?? 1998 Elsevier Science B.V.

Physics of the Earth and Planetary Interiors↗

USGS2021

Toward improved decision-support tools for Delta Smelt management actions

The Collaborative Science and Adaptive Management Program (CSAMP) has endorsed a goal of reversing the recent downward trajectory of the Delta Smelt population within 5-10 generations, with the long-term aim of establishing a self-sustaining population. An ambitious agenda of management actions is planned, and more management actions are being considered. This White Paper furthers one of the recommendations in the 2019 Delta Smelt Science Plan – the need to predict the potential ecological effects of taking a management action. Existing statistical models can be highly informative in assessing the response of Delta Smelt to changing system conditions and management actions. However, management actions can shift or alter conditions in ways that models based on analysis of historical data may not be able to represent, and short-term or localized effects may be missed with models designed to assess effects at the population level. Decision support tools (DSTs) are computer-based tools developed to assist decision-making, often combining computationally intensive analysis and spatial mapping of environmental relationships. DSTs can be used in planning processes that evaluate an array of actions, such as in Structured Decision Making (SDM), where DSTs are needed to compare among alternatives. DSTs can also be used to explore the potential effects of different approaches to implementing management actions. The goal of this White Paper is to identify plausible options for DSTs that could be developed for future use to evaluate management actions that seek to either reverse the decline of Delta Smelt or minimize or mitigate the effects of other water management actions. Different types of management actions lead to different needs for DSTs. This White Paper was developed using three types of actions currently being considered to enhance the Delta Smelt population: Supplementation with Hatchery Fish, Summer-Fall Habitat, and Food Enhancement actions. These three management actions target different parts of the estuary and different processes, with a variety of possible metrics to gauge performance. Three DSTs are proposed that collectively address management questions related to the management actions considered, with each requiring a slightly different set of processes to be included and producing an array of outputs at varying spatial and temporal scales: DST 1. Modeling Fish Movement, Survival, and Reproduction Across Their Range. This DST can address management questions that require information about Delta Smelt spatial distribution and movement. • DST 1 could be used to compare conditions with and without management actions in place, how the management action performs among different types of water years (with varied flow and associated abiotic conditions), and to assess relative change with different variations and strategies of the management actions. • DST 2. Changes in Habitat Conditions and Delta Smelt Response. This DST is intended to evaluate combinations of conditions that are considered to provide suitable habitat for Delta Smelt, and Delta Smelt response. Delta Smelt habitat is generally described as open water with low salinity (0 to 6), turbidity of at least 12 NTU, suitable temperature conditions, and sufficient food availability to support growth. • DST 3. Regional Effects of Food Subsidy. This DSTs seeks to evaluate effectiveness of food enhancement actions by providing information on responses of the immediate targets of the action (i.e., phytoplankton or zooplankton) and tracing those to projected growth responses of Delta Smelt. There is not a single DST that adequately addresses management questions relevant to all management actions, although there is some overlap in the management questions each of the three DSTs can address. For each of the DSTs a substantial foundation of models and approaches already exists and modeling has already been applied to several of the management actions described. However, a number of outstanding issues remain for further development of the proposed DSTs. These are summarized in this White Paper together with potential approaches that could be applied or tested. Some components for the DSTs are already available and thus development could be relatively easy. However, for several of the topics identified there are gaps in knowledge that currently limit formulation of model structure and process representations. This presents challenges to readily incorporate some needed mechanisms into the models. Eleven next steps, aligned with relevant DSTs, are outlined. The next steps vary in their complexity or technical ‘lift’ required. Many build on existing work, or methods and approaches that have already been developed or are underway, while others require additional thinking to establish a viable approach. Some interim utility for decisions could be gained during initial development of the DSTs with further features added over time. Development of a DST requires engagement of both managers and scientists. Identifying the outputs and resolution needed for management purposes early in development of any DST is essential for effective pursuit of next steps and suitable approaches to address challenges. Dialog between managers and technical experts also informs what process-based simulation can do, and what tradeoffs are acceptable to meet a given purpose. To further develop the DSTs outlined here for application in the estuary requires: - Engagement of a committed group of technical experts with appropriate expertise. - The development of a coordinated workplan including appropriate project management and tracking. - Dialog between potential users (i.e., managers and policy makers) and technical experts. - Resources to pursue DST development including personnel and computational resources. This White Paper demonstrates the potential for moving toward DSTs for a variety of management actions in support of Delta Smelt that include mechanistic representations of physical and biological processes. Through focused effort from technical experts, managers and policy makers, DSTs can be developed to provide quantitative predictions of management effects on the ecosystem, targeting the changes the management actions seek to achieve, how these effects compare to ambient conditions, and how the effects vary among water year types or with timing and location of actions. Importantly, solid foundations exist which can be leveraged, refined, and built upon to specifically inform current and future management decisions.

White Paper↗

USGS2012

An economic approach to assessing import policies designed to prevent the arrival of invasive species: the case of Puccinia psidii in Hawai'i

Since its first documented introduction to Hawai‘i in 2005, the rust fungus Puccinia psidii has already severely damaged Syzygium jambos (Indian rose apple) trees and the federally endangered Eugenia koolauensis (nioi). Fortunately, the particular strain has yet to cause serious damage to Metrosideros polymorpha (‘ōhi‘a), which comprises roughly 80% of the state's native forests and covers 400,000 ha. Although the rust has affected less than 5% of Hawaii's ‘ōhi‘a trees thus far, the introduction of more virulent strains and the genetic evolution of the current strain are still possible. Since the primary pathway of introduction is Myrtaceae plant material imported from outside the state, potential damage to ‘ōhi‘a can be minimized by regulating those high-risk imports. We discuss the economic impact on the state's florist, nursery, landscaping, and forest plantation industries of a proposed rule that would ban the import of non-seed Myrtaceae plant material and require a 1-year quarantine of seeds. Our analysis suggests that the benefits to the forest plantation industry of a complete ban on non-seed material would likely outweigh the costs to other affected sectors, even without considering the reduction in risk to ‘ōhi‘a. Incorporating the value of ‘ōhi‘a protection would further increase the benefit–cost ratio in favor of an import ban.

Hawai'i↗

USGS2014

Methane hydrates in nature - Current knowledge and challenges

Recognizing the importance of methane hydrate research and the need for a coordinated effort, the United States Congress enacted the Methane Hydrate Research and Development Act of 2000. At the same time, the Ministry of International Trade and Industry in Japan launched a research program to develop plans for a methane hydrate exploratory drilling project in the Nankai Trough. India, China, the Republic of Korea, and other nations also have established large methane hydrate research and development programs. Government-funded scientific research drilling expeditions and production test studies have provided a wealth of information on the occurrence of methane hydrates in nature. Numerous studies have shown that the amount of gas stored as methane hydrates in the world may exceed the volume of known organic carbon sources. However, methane hydrates represent both a scientific and technical challenge, and much remains to be learned about their characteristics and occurrence in nature. Methane hydrate research in recent years has mostly focused on: (1) documenting the geologic parameters that control the occurrence and stability of methane hydrates in nature, (2) assessing the volume of natural gas stored within various methane hydrate accumulations, (3) analyzing the production response and characteristics of methane hydrates, (4) identifying and predicting natural and induced environmental and climate impacts of natural methane hydrates, (5) analyzing the methane hydrate role as a geohazard, (6) establishing the means to detect and characterize methane hydrate accumulations using geologic and geophysical data, and (7) establishing the thermodynamic phase equilibrium properties of methane hydrates as a function of temperature, pressure, and gas composition. The U.S. Department of Energy (DOE) and the Consortium for Ocean Leadership (COL) combined their efforts in 2012 to assess the contributions that scientific drilling has made and could continue to make to advance our understanding of methane hydrates in nature. COL assembled a Methane Hydrate Project Science Team with members from academia, industry, and government. This Science Team worked with COL and DOE to develop and host the Methane Hydrate Community Workshop, which surveyed a substantial cross section of the methane hydrate research community for input on the most important research developments in our understanding of methane hydrates in nature and their potential role as an energy resource, a geohazard, and/or as an agent of global climate change. Our understanding of how methane hydrates occur in nature is still growing and evolving, and it is known with certainty that field, laboratory, and modeling studies have contributed greatly to our understanding of hydrates in nature and will continue to be a critical source of the information needed to advance our understanding of methane hydrates.

Journal of Chemical and Engineering Data↗

USGS2009

2008 Spawning Cisco Investigations in the Canadian Waters of Lake Superior

The Great Lakes Science Center of the United States Geological Survey (USGS) is working cooperatively with the Ontario Ministry of Natural Resources (OMNR) on a threeyear study to develop standard procedures for acoustic and midwater trawl (AC-MT) assessments of spawning cisco Coregonus artedi that the OMNR can carry forward as a management activity. In year two (2008), we conducted an AC-MT survey of the northern shore from Nipigon Bay to Thunder Bay. Spawning-cisco (> 250 mm total length) densities were lowest near Nipigon Bay (<10/ha), moderate in and around Black Bay (15- 30/ha), and highest in Thunder Bay (118/ha). Rainbow smelt Osmerus mordax densities were highest in Nipigon (2,179/ha) and Black (3,219/ha) bays, and lowest in Thunder Bay (961/ha). We combined our AC-MT survey results with commercial catch records to estimate exploitation fractions of female cisco in Thunder Bay during the 2008 fishery at 4% for ages 1-5, 8.7% for ages 6-12, and 4.4% for ages ≥ 13. Lake Superior fishery managers recently recommended that annual exploitation of adult female lake cisco be kept below 10-15%. Recruitment of cisco since 2003 has been low and there is a strong probability the Thunder Bay stock will decline into the future. Using a simple population dynamics approach we estimated that if the current total allowable catch (TAC) quota is held constant, exploitation fractions could exceed 10% by 2010 and 15% by 2011. Our 2008 collections suggested the survey of Black Bay was likely conducted before all spawners had returned there to spawn. Our data also suggested that cisco collected in Black Bay and east of this site in mid-November may be from the same stock. During November 2009 we will attempt to get better definition of the area occupied by cisco around Black Bay and also determine when surveys should be conducted at this location.

Report↗

USGS2019

Mapping research on hydropower and sustainability in the Brazilian Amazon: Advances, gaps in knowledge and future directions

In the last twenty years, multiple large and small hydroelectric dams have begun to transform the Amazonian region, spawning a growing volume of academic research across diverse disciplinary and interdisciplinary fields. In this article, we offer a critical review of recent research related to hydropower and sustainability with a focus on the Brazilian Amazon. We revisit the sustainability concept to include the contribution of various knowledge fields and perspectives for understanding, managing and making decisions about social-ecological systems transformed by dams. We conducted a literature review in Web of Science of academic publications centered in the past 5 years (2014–2019), on diverse aspects of hydropower planning, construction, operation and monitoring in the Brazilian Amazon. We present results of a co-occurrence network analysis of publications, highlighting bridging fields, network disconnections, and opportunities for interdisciplinary research. Finally, we report recent advances in the understanding and management of social-ecological systems in Amazonian watersheds, including biophysical, socio-economic, governance and development processes linked to hydropower planning and implementation. This review identifies knowledge gaps and future research directions, highlighting opportunities for improved communication among scientists, practitioners, decision-makers, indigenous peoples and local communities.

Amazon↗

USGS2002

Cordilleran-margin quartzites in Baja California – implications for tectonic transport

One of the current controversies in Cordilleran tectonics concerns the position of Baja California prior to ∼300 km of opening of the Gulf of California. Geologic arguments, together with paleomagnetic results from Lower Cretaceous volcanic rocks, suggest that the rocks of the Baja Peninsula formed and evolved along the coast of northwestern Mexico prior to opening of the Gulf. In contrast, paleomagnetic data from Cretaceous–early Tertiary plutonic rocks and clastic strata have been interpreted by some workers to suggest that Baja was located near southern Mexico at approximately 80 Ma. The presence of similar detrital zircon ages in lower Paleozoic quartzites of northeast Baja and in lower Paleozoic strata east of the Gulf, in northwestern Mexico and southwestern US, provides strong support for the northern paleoposition, suggesting that Baja has been transported northward by only ∼300 km

Earth and Planetary Science Letters↗

USGS2013

Geodatabase compilation of hydrogeologic, remote sensing, and water-budget-component data for the High Plains aquifer, 2011

The High Plains aquifer underlies almost 112 million acres in the central United States. It is one of the largest aquifers in the Nation in terms of annual groundwater withdrawals and provides drinking water for 2.3 million people. The High Plains aquifer has gained national and international attention as a highly stressed groundwater supply primarily because it has been appreciably depleted in some areas. The U.S. Geological Survey has an active program to monitor the changes in groundwater levels for the High Plains aquifer and has documented substantial water-level changes since predevelopment: the High Plains Groundwater Availability Study is part of a series of regional groundwater availability studies conducted to evaluate the availability and sustainability of major aquifers across the Nation. The goals of the regional groundwater studies are to quantify current groundwater resources in an aquifer system, evaluate how these resources have changed over time, and provide tools to better understand a systems response to future demands and environmental stresses. The purpose of this report is to present selected data developed and synthesized for the High Plains aquifer as part of the High Plains Groundwater Availability Study. The High Plains Groundwater Availability Study includes the development of a water-budget-component analysis for the High Plains completed in 2011 and development of a groundwater-flow model for the northern High Plains aquifer. Both of these tasks require large amounts of data about the High Plains aquifer. Data pertaining to the High Plains aquifer were collected, synthesized, and then organized into digital data containers called geodatabases. There are 8 geodatabases, 1 file geodatabase and 7 personal geodatabases, that have been grouped in three categories: hydrogeologic data, remote sensing data, and water-budget-component data. The hydrogeologic data pertaining to the northern High Plains aquifer is included in three separate geodatabases: (1) base data from a groundwater-flow model; (2) hydrogeology and hydraulic properties data; and (3) groundwater-flow model data to be used as calibration targets. The remote sensing data for this study were developed by the U. S. Geological Survey Earth Resources Observation and Science Center and include historical and predicted land-use/land-cover data and actual evapotranspiration data by using remotely sensed temperature data. The water-budget-component data contains selected raster data from maps in the “Selected Approaches to Estimate Water-Budget Components of the High Plains, 1940 Through 1949 and 2000 Through 2009” report completed in 2011 ( http://pubs.usgs.gov/sir/2011/5183/ ). Federal Geographic Data Committee compliant metadata were created for each spatial and tabular data layer in the geodatabases.

Colorado, Kansas, Nebraska, New Mexico, Oklahoma, ↗

USGS2015

Community for Data Integration 2013 Annual Report

The U.S. Geological Survey (USGS) conducts earth science to help address complex issues affecting society and the environment. In 2006, the USGS held the first Scientific Information Management Workshop to bring together staff from across the organization to discuss the data and information management issues affecting the integration and delivery of earth science research and investigate the use of “communities of practice” as mechanisms to share expertise about these issues. Out of this effort emerged the Council for Data Integration, which was conceived as an official organizational function that would help guide data integration activities and formalize communities of practice into working groups. However by 2009, it became apparent that many members of the council had an interest in developing data integration solutions and sharing expertise in a less formal grassroots perspective, thus transforming the “Council” into a “Community” for Data Integration (CDI). Today, the CDI represents a dynamic community of practice focused on advancing science data and information management and integration capabilities across the USGS and the CDI community. The CDI fosters an environment for collaboration and sharing by bringing together expertise from external partners and representatives across USGS who are involved in research, data management, and information technology. Membership is voluntary and open to USGS employees and other individuals and organizations willing to contribute to the community (if interested, contact cdi@usgs.gov). The purpose of the CDI is to advance understanding of Earth systems through enhanced use of data and information including associated tools and techniques provide a forum for people doing work with data integration to come together to share ideas as well as learn new skills and techniques, and grow overall USGS capabilities with data and information by increasing visibility of the work of many people throughout the USGS and the CDI community. To achieve these goals, the CDI operates within four applied areas: monthly forums, annual workshop/webinar series, working groups, and projects. The monthly forums, also known as the Opportunity/Challenge of the Month, provide an open dialogue to share and learn about data integration efforts or to present problems that invite the Community to offer solutions, advice, and support. Since 2010, the CDI has also sponsored annual workshops/webinar series to encourage the exchange of ideas, sharing of activities, presentations of current projects, and networking among members. Stemming from common interests, the working groups are focused on efforts to address data management and technical 2 challenges, including the development of standards and tools, improving interoperability and information infrastructure, and data preservation within USGS and its partners. The growing support for the activities of the working groups led to the CDI’s first formal request for proposals (RFP) process in 2013 to fund projects that produced tangible products. Today the CDI continues to hold an annual RFP that create data management tools and practices, collaboration tools, and training in support of data integration and delivery.

Open-File Report↗

USGS1998

Drought-induced shift of a forest-woodland ecotone: Rapid landscape response to climate variation

In coming decades, global climate changes are expected to produce large shifts in vegetation distributions at unprecedented rates. These shifts are expected to be most rapid and extreme at ecotones, the boundaries between ecosystems, particularly those in semiarid landscapes. However, current models do not adequately provide for such rapid effects—particularly those caused by mortality—largely because of the lack of data from field studies. Here we report the most rapid landscape-scale shift of a woody ecotone ever documented: in northern New Mexico in the 1950s, the ecotone between semiarid ponderosa pine forest and piñon–juniper woodland shifted extensively (2 km or more) and rapidly (<5 years) through mortality of ponderosa pines in response to a severe drought. This shift has persisted for 40 years. Forest patches within the shift zone became much more fragmented, and soil erosion greatly accelerated. The rapidity and the complex dynamics of the persistent shift point to the need to represent more accurately these dynamics, especially the mortality factor, in assessments of the effects of climate change.

Proceedings of the National Academy of Sciences of↗

USGS2020

Synthesis: A framework for predicting the dark side of ecological subsidies

In this chapter, we synthesize the state of the science regarding ecological subsidies and contaminants at the land-water interface and suggest research and management approaches for linked freshwater-terrestrial ecosystems. Specifically, we focus on movements of animals with complex life histories and the detrital inputs associated with animal and plant matter delivered to freshwaters. We present a framework based on the physicochemical parameters of contaminants and how they shape the relationship between contaminant persistence within resource subsidies (“dark side” of subsidies) and movement of resource subsidies (“bright side” of subsidies) across ecosystem boundaries. This relationship between the “dark side” and “bright side” of subsidies defines an important parameter space that allows researchers and practitioners to predict the potential impacts of aquatic contaminants on resource subsidies and their interaction with other stressors on consumers. Ecological factors such as ecosystem productivity, community composition, and consumer prey preference shape the ecotoxicological outcomes of aquatic contamination on subsidies. Landscape factors such as lithology, hydrogeomorphology, hydroperiod, and land use underlie chemical, toxicological, and ecological patterns and provide the context within which effects of contaminants play out. Finally, effects of contaminants combine with effects of other global stressors on timing, quality, and quantity of subsidies that drive responses to contaminants at the land-water interface. Understanding the “dark side” of ecological subsidies requires expertise from multiple disciplines. We attempt to synthesize current knowledge from those disciplines and generate conceptual models that ecologists can use to guide future research in understanding cross-ecosystem subsidies and contaminant fate and effects.

Book chapter↗

USGS2023

Flushing time variability in a short, low-inflow estuary

Flushing time, the time scale for exchange and mixing between embayed and oceanic waters in an estuary, plays an integral role in determining water quality and aquatic ecosystem health. Here, we investigated the spatiotemporal variability of flushing times throughout Morro Bay, a short, low-inflow estuary (LIE) on the California coast, using a calibrated and validated hydrodynamic model (Delft3D). Morro Bay has historically supported an extensive eelgrass ( Zostera marina ) habitat, which declined substantially from 139 to 5.4 ha during 2007–2017. Eelgrass decline motivated the current research into the role of changing bed roughness and oceanic drivers (i.e., tide and sea-level rise) on estuarine hydrodynamics and flushing times. We found that tidal variability exerts the strongest control on flushing times compared to other effects, i.e., bed roughness or sea-level rise. Additionally, we found that increasing sea level and decreasing bed roughness (associated with declining seagrass coverage) yielded higher rates of mixing (lower flushing times). We detected a strong correspondence between areas having shorter flushing times (e.g., near the estuary mouth) and areas occupied by resilient eelgrass populations in Morro Bay. Our findings further indicated that flushing times in short LIEs are particularly sensitive to several factors (e.g., bed roughness, sea level) that are susceptible to anthropogenic disturbance and future climate change.

California↗

USGS2008

Molecular and morphological analysis of the critically endangered Fijian iguanas reveals cryptic diversity and a complex biogeographic history

The Pacific iguanas of the Fijian and Tongan archipelagos are a biogeographic enigma in that their closest relatives are found only in the New World. They currently comprise two genera and four species of extinct and extant taxa. The two extant species, Brachylophus fasciatus from Fiji, Tonga, and Vanuatu and Brachylophus vitiensis from western Fiji, are of considerable conservation concern with B. vitiensis listed as critically endangered. A recent molecular study has shown that Brachylophus comprised three evolutionarily significant units. To test these conclusions and to reevaluate the phylogenetic and biogeographic relationships within Brachylophus, we generated an mtDNA dataset consisting of 1462 base pairs for 61 individuals from 13 islands, representing both Brachylophus species. Unweighted parsimony analyses and Bayesian analyses produced a well-resolved phylogenetic hypothesis supported by high bootstrap values and posterior probabilities within Brachylophus. Our data reject the monophyly of specimens previously believed to comprise B. fasciatus. Instead, our data demonstrate that living Brachylophus comprise three robust and well-supported clades that do not correspond to current taxonomy. One of these clades comprises B. fasciatus from the Lau group of Fiji and Tonga (type locality for B. fasciatus), while a second comprises putative B. fasciatus from the central regions of Fiji, which we refer to here as B. n. sp. Animals in this clade form the sister group to B. vitiensis rather than other B. fasciatus. We herein describe this clade as a new species of Brachylophus based on molecular and morphological data. With only one exception, every island is home to one or more unique haplotypes. We discuss alternative biogeographic hypotheses to explain their distribution in the Pacific and the difficulties of distinguishing these. Together, our molecular and taxonomic results have important implications for future conservation initiatives for the Pacific iguanas. ?? 2008 The Royal Society.

Philosophical Transactions of the Royal Society B:↗