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Testing the effectiveness of interactive training on sexual harassment and assault in field science

Fieldwork is a critical tool for scientific research, particularly in applied disciplines. Yet fieldwork is often unsafe, especially for members of historically marginalized groups and people whose presence in scientific spaces threatens traditional hierarchies of power, authority, and legitimacy. Research is needed to identify interventions that prevent sexual harassment and assault from occurring in the first place. We conducted a quasi-experiment assessing the impacts of a 90-min interactive training on field-based staff in a United States state government agency. We hypothesized that the knowledge-based interventions, social modeling, and mastery experiences included in the training would increase participants’ sexual harassment and assault prevention knowledge, self-efficacy, behavioural intention, and behaviour after the training compared to a control group of their peers. Treatment–control and pre-post training survey data indicate that the training increased participants’ sexual harassment and assault prevention knowledge and prevention self-efficacy, and, to a lesser extent, behavioural intention. These increases persisted several months after the training for knowledge and self-efficacy. While we did not detect differences in the effect of the training for different groups, interestingly, post-hoc tests indicated that women and members of underrepresented racial groups generally scored lower compared to male and white respondents, suggesting that these groups self-assess their own capabilities differently. Finally, participants’ likelihood to report incidents increased after the training but institutional reports remained low, emphasizing the importance of efforts to transform reporting systems and develop better methods to measure bystander actions. These results support the utility of a peer-led interactive intervention for improving workplace culture and safety in scientific fieldwork settings.

Scientific Reports↗

Snake River fall Chinook salmon life history investigations, 1/1/2012 - 12/31/2012: Annual report 2002-032-00

Executive Summary a. Fish Population RM&E This annual report describes the data collected and analyses conducted during calendar years 2012-2013 by staff of project 20023200. The USGS contributed only to the predation research and reservoir invertebrate work described in this report and the presentation of their results is consistent with USGS policy guidelines. The USGS is not responsible for the content provided by other contributing authors. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government. The main goal of this project is to better understand juvenile Snake River fall Chinook salmon life history diversity and the factors that influence it. This is called for in RPA 55.4 “Investigate key characteristics of Snake River fall Chinook salmon early life history.” We 3 investigated the importance of estuary entry and rearing to various Snake River fall Chinook salmon life histories. Otoliths were used to examine differences in estuary use between subyearlings and yearlings, and to determine natal habitats, rearing habitats, and overwintering habitat for returning adults. Estuary growth was best explained by estuary residence time and natal location. b. Predation and Invasive Species Management RM&E We investigated the extent of smallmouth bass predation on juvenile fall Chinook salmon in Lower Granite Reservoir as called for in the Fish and Wildlife Program, “The federal action agencies should work cooperatively with NOAA Fisheries, states, tribes, and the Council to review, evaluate, develop, and implement strategies to reduce non-native piscivorous predation on salmon and steelhead, especially by smallmouth bass, channel catfish, and walleye” (Page 52). Smallmouth bass stomach contents were collected and analyzed for the presence of juvenile salmon. Smallmouth bass abundance was estimated with mark-recapture techniques, and salmon consumption by bass was expanded based on bass abundance to determine the annual loss of juvenile fall Chinook salmon for the study period and area. The estimated loss of juvenile fall Chinook salmon to predation in Lower Granite Reservoir exceeded 109,000 fish in 2012. This information could be used to adaptively formulate better hatchery release strategies to reduce the effects of predation. Obtaining better estimates of smallmouth bass abundance and distribution in future years would reduce the uncertainty of estimates. This study will be completed by 2017. We also examined the effects of various field temperature scenarios resulting from summer flow augmentation on juvenile fall Chinook salmon susceptibility to smallmouth bass predation in laboratory trials. Predation susceptibility of juvenile salmon acclimated at cool temperatures (10°C) was highest when exposed to predators at 24°C. These results indicate that predation susceptibility may be higher when a relatively large temperature difference exists between the Clearwater and Snake rivers; that is, when cool water flow augmentation occurs in summer. Finally, we examined the role of different invasive invertebrates in lower Snake River reservoir food webs that are food, or competitors for food, for juvenile fall Chinook salmon. The Siberian prawn, a relatively new invader, is relatively abundant but its role on the food web is largely unexplored. Prawns are successfully reproducing and their diet is 81% Neomysis (an invasive opossum shrimp) which is heavily used at times by juvenile salmon for food. Neomysis has become very abundant in lower Snake River reservoirs in recent years and may be a profitable food item for many fish species.

Oregon, Washington↗

Decision support system development at the Upper Midwest Environmental Sciences Center

A Decision Support System (DSS) can be defined in many ways. The working definition used by the U.S. Geological Survey Upper Midwest Environmental Sciences Center (UMESC) is, “A spatially based computer application or data that assists a researcher or manager in making decisions.” This is quite a broad definition—and it needs to be, because the possibilities for types of DSSs are limited only by the user group and the developer’s imagination. There is no one DSS; the types of DSSs are as diverse as the problems they help solve. This diversity requires that DSSs be built in a variety of ways, using the most appropriate methods and tools for the individual application. The skills of potential DSS users vary widely as well, further necessitating multiple approaches to DSS development. Some small, highly trained user groups may want a powerful modeling tool with extensive functionality at the expense of ease of use. Other user groups less familiar with geographic information system (GIS) and spatial data may want an easy-to-use application for a nontechnical audience. UMESC has been developing DSSs for almost 20 years. Our DSS developers offer our partners a wide variety of technical skills and development options, ranging from the most simple Web page or small application to complex modeling application development.

Upper Midwest↗

Science for the stewardship of the groundwater resources of Cape Cod, Massachusetts

Groundwater is the sole source of drinking water and a major source of freshwater for domestic, industrial, and agricultural uses on Cape Cod, Massachusetts. Groundwater discharged from aquifers also supports freshwater pond and stream ecosystems and coastal wetlands. Six hydraulically distinct groundwater-flow systems (lenses) have been delineated on Cape Cod. Of the approximately 450 million gallons per day of water that enters these lenses as recharge from precipitation, about 69 percent discharges directly to the coast, about 24 percent discharges to streams, and almost 7 percent is withdrawn by public-supply wells. In most areas, groundwater in the sand and gravel aquifers is shallow and susceptible to contamination from anthropogenic sources and saltwater intrusion. Continued land development and population growth on Cape Cod have created concerns that potable water will become less available and that the quantity and quality of water flowing to natural discharge areas such as ponds, streams, and coastal waters will continue to decline. The U.S. Geological Survey (USGS) has been investigating groundwater and surface-water resources on Cape Cod for more than 50 years. Recent studies highlighted in this fact sheet have focused on the sources of water to public-supply wells, ponds, streams, and coastal areas; the transport and discharge of nitrogen derived from domestic and municipal disposal of wastewater; and the effects of climate change on groundwater and surface-water resources. Other USGS activities include long-term monitoring of groundwater and pond levels and field research on groundwater contamination at the USGS Cape Cod Toxic Substances Hydrology Research Site ( http://ma.water.usgs.gov/MMRCape/ ) near the Joint Base Cape Cod (JBCC), formerly the Massachusetts Military Reservation.

Massachusetts↗

The calcite → aragonite transformation in low-Mg marble: Equilibrium relations, transformations mechanisms, and rates

Experimental transformation of a rather pure natural calcite marble to aragonite marble did not proceed via the expected straightforward polymorphic replacement. Instead, the small amount of Mg in the starting material (0.36 wt %) was excluded from the growing aragonite and diffused preferentially into the remaining calcite grains, producing Mg-rich calcite rods that persisted as relicts. Nucleation of aragonite occurred exclusively on grain boundaries, with aragonite [001] oriented subparallel to calcite [0001]. The aragonite crystals preferentially consumed the calcite crystal on which they nucleated, and the reaction fronts developed preferentially along the {010} and {110} planes of aragonite. Each aragonite neoblast that grew was nearly free of Mg (typically <0.1 wt %). The excess Mg was taken up by the calcite grains in between, stabilizing them and causing a few volume percent rodlike relicts of Mg-enriched calcite (up to 10 wt % MgO) to be left behind by the advancing reaction front. The aragonite growth rates are approximately linear and range from &sim;3 &times; 10 &minus;11 m s &minus;1 at 600&deg;C to &sim;9 &times; 10 &minus;9 m s &minus;1 at 850&deg;C, with an apparent activation enthalpy of 166 &plusmn; 91 kJ mol &minus;1 . This reaction mechanism and the resultant texture are akin to cellular precipitation reactions in metals. Similar transformation textures have been reported from high-Mg marbles in Japan and China that disproportionated to low-Mg calcite and dolomite.

Journal of Geophysical Research B: Solid Earth↗

Historical Ground-Water Development in the Salinas Alluvial Fan Area, Salinas, Puerto Rico, 1900-2005

The Salinas alluvial fan area has historically been one of the most intensively used agricultural areas in the South Coastal Plain of Puerto Rico. Changes in agricultural practices and land use in the Salinas alluvial fan have also caused changes in the geographic distribution of ground-water withdrawals from the alluvial aquifer. As a result, the ground-water balance and ground-water flow pattern have changed throughout the years and may explain the presence of saline ground water along parts of the coast at present. By providing a reconstruction of historical ground-water development in the Salinas alluvial fan area, from the initial years of aquifer development at about 1900 to the most recent conditions existing in 2005, water resources managers and planners can use the results of the analysis for a more complete understanding of aquifer conditions especially pertaining to water quality. This study effort was conducted by the U.S. Geological Survey in cooperation with the Puerto Rico Department of Natural and Environmental Resources as a contribution in the management of the Jobos Bay National Estuarine Research Reserve. The study area encompasses about 20 mi2 (square miles) of the extensive South Coastal Plain alluvial aquifer system (fig. 1). The study area is bounded to the north by foothills of the Cordillera Central mountain chain, to the south by the Caribbean Sea, and to the east and west by the Rio Nigua de Salinas and the Quebrada Aguas Verdes, respectively. Fan-delta and alluvial deposits contain the principal aquifers in the study area.

Scientific Investigations Map↗

Loss of sagebrush ecosystems and declining bird populations in the Intermountain West: Priority research issues and information needs

Sagebrush lands in the Intermountain West are declining rapidly in quality and extent. Consequently, populations of many bird species dependent on these ecosystems also are declining. The greater sage-grouse has been petitioned for listing as a threatened and endangered species, and other species of sagebrush-obligate birds have special conservation status in most states. We identified the primary issues and information needs during a multi-agency workshop, conducted in response to concerns by management agencies related to declining bird population trends in sagebrush habitats. Priority needs were to (1) obtain a better understanding of bird response to habitat and landscape features, (2) develop monitoring designs to sample habitats and bird populations, (3) determine the effects of land use on sagebrush habitats and dependent bird species, and (4) identify linkages between breeding and wintering ranges. This agenda will identify causes and mechanisms of population declines in birds dependent on sagebrush ecosystems and will lead to better management of the ecosystems upon which they depend.

Fact Sheet↗

Third U.S. Geological Survey Wildland Fire-Science Workshop : Denver, Colorado, November 12-15, 2002

Executive Summary -- The historically significant wildland fire events that occurred in the United States during 2000 and 2002, together with the associated recognition of the need for a different national policy of forest management, has led to an increased awareness of the need for cooperative effort among all Federal agencies in planning for and managing the risks and consequences of wildland fire. The expertise and capabilities of the U.S. Geological Survey (USGS) are significant resources in this regard, and the agency is becoming increasingly involved in fire-science activities in support of the various land-management agencies that are dealing directly with this issue. The First USGS Wildland Fire Workshop was held in Sioux Falls, South Dakota, in 1997 and helped to establish the direction of USGS in sharing its expertise with the fire-management agencies. The Second USGS Wildland Fire Workshop was held in Los Alamos, New Mexico, in 2000 and brought together all the agencies involved in the management of wildland fires in order to determine their needs, to demonstrate USGS capabilities to meet those needs, and to establish methods for the USGS to distribute data and tools useful in fire management. It enhanced the relationships developed during the 1997 workshop and helped to define USGS' role in the fire-management community. The Third USGS Wildland Fire-Science Workshop, held in Denver, Colorado, November 12?15, 2002, was an opportunity for exchange of information on recent progress in the area of fire science and to determine the gaps in fire-science research that could be addressed by the USGS. In addition to more than 90 USGS scientists engaged in fire-related research and managers of organizational units involved in some aspect of wildland fire activities, the workshop was attended by about 30 representatives of 11 other Federal agencies. There also were a number of attendees affiliated with several universities, private companies, and State and local agencies. The 4-day meeting consisted of a pre-workshop field trip to the Hayman Fire area, several keynote presentations, five panel discussions, presentation and 'breakout' discussion of four 'white paper' topics, and a poster session with more than 30 presentations.

Scientific Investigations Report↗

The HRSC DTM test

The High Resolution Stereo Camera (HRSC, [1]) is part of the orbiter payload on the Mars Express (MEX) mission of the European Space Agency (ESA), orbiting the Red Planet in a highly elliptical orbit since January 2004. For the first time in planetary exploration, a camera system has especially been designed to meet the requirements of photogrammetry and cartography for mapping the complete surface of a planet [2]. For this purpose HRSC operates as a push broom scanning instrument with 9 CCD line detectors mounted in parallel in the focal plane of the camera. Data acquisition is achieved by five panchromatic channels under different observation angles and four colour channels. At periapsis the ground resolution of the nadir channel amounts to 12.5 m, the stereo channels are typically operated at a 2x coarser resolution with the two photometry and the four colour channels at 4x or 8x coarser resolution. The data provided by HRSC are well suited for the automatic generation of Digital Terrain Models (DTMs) and other 3D data products. Such products are of vital interest to planetary sciences. As the Mars Express mission has recently been extended the prospects for a complete topographic mapping of Mars by HRSC at very high resolution are very good, indeed. Image matching is well researched and has been documented in the literature. In general, it is agreed that in simple terrain and with adequate image acquisition geometry very good results can be achieved by totally automated approaches. Things start to be much more complicated if more complex situations are faced, such as steep terrain, height discontinuities, occlusions, poor texture, shadows, atmospheric dust, clouds, increased image noise, compression artefacts etc., some of which are commonplace in HRSC images. Nevertheless, automatic DTM generation from HRSC images by means of image matching has reached a very high level over the years. The systematic processing chain at DLR for producing preliminary DTMs with 200 m resolution [3] runs well and stable. In addition, several groups are able to produce DTMs using different approaches, or have developed alternative modules for parts of the DTM generation process [2]. Also, a few groups have been developing shape-from-shading techniques which have reached pre-operational efficiency. It is against this background that the desire was expressed to compare the individual approaches for deriving DTMs from HRSC images in order to assess their advantages and disadvantages. Based on carefully chosen test sites the test participants have produced DTMs which have been subsequently analysed in a quantitative and a qualitative manner. This paper reports on the results obtained in this test, more details can be found in [4].

Conference Paper↗

Electrical properties of methane hydrate + sediment mixtures

Knowledge of the electrical properties of multicomponent systems with gas hydrate, sediments, and pore water is needed to help relate electromagnetic (EM) measurements to specific gas hydrate concentration and distribution patterns in nature. Toward this goal, we built a pressure cell capable of measuring in situ electrical properties of multicomponent systems such that the effects of individual components and mixing relations can be assessed. We first established the temperature-dependent electrical conductivity ( &sigma; ) of pure, single-phase methane hydrate to be ~5 orders of magnitude lower than seawater, a substantial contrast that can help differentiate hydrate deposits from significantly more conductive water-saturated sediments in EM field surveys. Here we report &sigma; measurements of two-component systems in which methane hydrate is mixed with variable amounts of quartz sand or glass beads. Sand by itself has low &sigma; but is found to increase the overall &sigma; of mixtures with well-connected methane hydrate. Alternatively, the overall &sigma; decreases when sand concentrations are high enough to cause gas hydrate to be poorly connected, indicating that hydrate grains provide the primary conduction path. Our measurements suggest that impurities from sand induce chemical interactions and/or doping effects that result in higher electrical conductivity with lower temperature dependence. These results can be used in the modeling of massive or two-phase gas-hydrate-bearing systems devoid of conductive pore water. Further experiments that include a free water phase are the necessary next steps toward developing complex models relevant to most natural systems.

Journal of Geophysical Research↗

In situ determination of particle friction angles of fluvial gravels

Particle friction angles Φ represent the physical resistance to initial movement of a sediment particle and are therefore useful for relating initiation of motion to particular flows. We determined over 8000 friction angle values at five natural rivers by applying a new method that uses a digital load cell to directly measure the force F d required to pivot or slide a particle out of its natural resting place. Within each site, median Φ values were very similar to previously reported relations, yet different enough between sites that a location-general predictive empirical relation would produce errors in Φ of ±10 degrees for D i / K s > 1. Furthermore, within a D i / K s class at a given site the range in Φ was as large as 80°, much greater than the range of median values between classes for natural sediment mixtures. Using estimates of τ c * from extensive bed load measurements made by Andrews and Erman [1986] at Sagehen Creek and the in situ Φ measurements made in this study together with a theoretical model developed by Wiberg and Smith [1987], we show that Φ measurements made with this new method can be used to accurately predict τ c * for natural, water-worked sediments. Additionally, these results confirm that a Φ value ≪Φ 50 is more appropriate for predicting τ c * of a given size class.

Water Resources Research↗

Surficial sediment character of the Louisiana offshore continental shelf region: A GIS compilation

The Louisiana coastal zone, comprising the Mississippi River delta plain stretching nearly 400 km from Sabine Pass at the Texas border east to the Chandeleur Islands at the Mississippi border, represents one of North America’s most important coastal ecosystems in terms of natural resources, human infrastructure, and cultural heritage. At the same time, this region has the highest rates of coastal erosion and wetland loss in the Nation due to a complex combination of natural processes and anthropogenic actions over the past century. Comparison of historical maps dating back to 1855 and recent aerial photography show the Louisiana coast undergoing net erosion at highly variable rates. Rates have increased significantly during the past several decades. Earlier published statewide average shoreline erosion rates were >6 m/yr; rates have increased recently to >10 m/yr. The increase is attributable to collective action of storms, rapid subsidence, and pervasive man-made alterations of the rivers and the coast. In response to the dramatic landloss, regional-scale restoration plans are being developed by a partnership of federal and state agencies for the delta plain that have the objectives of maintaining the barrier islands, reducing wetland loss, and enhancing the natural sediment delivery processes. There is growing awareness that the sustainability of coastal Louisiana's natural resources and human infrastructure depends on the successful restoration of natural geologic processes. Critical to the long term success of restoration is scientific understanding of the geologic history and processes of the coastal zone region, including interactions between the rivers, wetlands, coast, and inner shelf. A variety of geophysical studies and mapping of Late Quaternary sedimentary framework and coastal processes by U.S. Geological Survey and other scientists during the past 50 years document that the Louisiana delta plain is the product of a complex history of cyclic delta switching by the Mississippi River and its distributaries over the past ~10,000 years that resulted in laterally overlapping deltaic depocenters. The interactions among riverine, coastal, and inner shelf processes have been superimposed on the Holocene transgression resulting in distinctive landforms and sedimentary sequences. Four Holocene shelf-phase delta complexes have been identified using seismic reflection data and vibracores. Each delta complex is bounded by transgressive surfaces. Following each cycle of deposition and abandonment, the delta lobes undergo regional subsidence and marine reworking that forms transgressive coastal systems and barrier islands. Ultimately, the distal end of each of the abandoned delta lobes is marked by submerged marine sand bodies representing drowned barriers. These sand bodies (e.g. Ship Shoal, Outer Shoal, Trinity Shoal, Tiger Shoal, St. Bernard Shoal) offer the largest volumes and highest quality sand for beach nourishment and shoreline and wetlands restoration. These four large sand shoals on inner continental shelf, representing the reworked remnants of former prograded deltaic headlands that existed on the continental shelf at lower sea level, were generated in the retreat path of the Mississippi River delta plain during the Holocene transgression. Penland and others (1989) have shown these sand bodies represent former shoreline positions associated with lower still stands in sea level. Short periods of rapid relative sea-level rise led to the transgressive submergence of the shorelines which today can be recognized at the -10 m to -20 m isobaths on the Louisiana continental shelf. Trinity Shoal and Ship Shoal represent the -10 m middle-to-late Holocene shoreline trend, whereas Outer Shoal and the St. Bernard Shoals define the -20 m early Holocene shoreline trend (Penland and others, 1989). Collectively, these sand shoals constitute a large volume of high quality sandy sediment potentially suitable for barrier island nourishment and coastal restoration. The USGS has actively supported coastal and wetlands geologic research for the past two decades in partnership with universities (e.g., Louisiana State University, University of New Orleans), state agencies (e.g. Louisiana Geological Survey, Louisiana Department of Natural Resources), and private organizations (Williams and others, 1992a,b; Williams and Cichon, 1993; List and others, 1994). These studies have focused on regional-scale mapping of coastal and wetland change and developing a better understanding of the processes that cause coastal erosion and wetlands loss, particularly the rapid deterioration of Louisiana's barrier islands, estuaries, and wetlands environments. With a better understanding of these processes, the ability to model and predict erosion and wetlands loss will improve. More accurate predictions will, in turn, allow for proper management of coastal resources. Improved predictions will also allow for better assessments of the utility of different restoration alternatives.

Louisiana↗

Documentation for initial seismic hazard maps for Haiti

In response to the urgent need for earthquake-hazard information after the tragic disaster caused by the moment magnitude (M) 7.0 January 12, 2010, earthquake, we have constructed initial probabilistic seismic hazard maps for Haiti. These maps are based on the current information we have on fault slip rates and historical and instrumental seismicity. These initial maps will be revised and improved as more data become available. In the short term, more extensive logic trees will be developed to better capture the uncertainty in key parameters. In the longer term, we will incorporate new information on fault parameters and previous large earthquakes obtained from geologic fieldwork. These seismic hazard maps are important for the management of the current crisis and the development of building codes and standards for the rebuilding effort. The boundary between the Caribbean and North American Plates in the Hispaniola region is a complex zone of deformation. The highly oblique ~20 mm/yr convergence between the two plates (DeMets and others, 2000) is partitioned between subduction zones off of the northern and southeastern coasts of Hispaniola and strike-slip faults that transect the northern and southern portions of the island. There are also thrust faults within the island that reflect the compressional component of motion caused by the geometry of the plate boundary. We follow the general methodology developed for the 1996 U.S. national seismic hazard maps and also as implemented in the 2002 and 2008 updates. This procedure consists of adding the seismic hazard calculated from crustal faults, subduction zones, and spatially smoothed seismicity for shallow earthquakes and Wadati-Benioff-zone earthquakes. Each one of these source classes will be described below. The lack of information on faults in Haiti requires many assumptions to be made. These assumptions will need to be revisited and reevaluated as more fieldwork and research are accomplished. We made two sets of maps using different assumptions about site conditions. One set of maps is for a firm-rock site condition (30-m averaged shear-wave velocity, Vs30, of 760 m/s). We also developed hazard maps that contain site amplification based on a grid of Vs30 values estimated from topographic slope. These maps take into account amplification from soils. We stress that these new maps are designed to quantify the hazard for Haiti; they do not consider all the sources of earthquake hazard that affect the Dominican Republic and therefore should not be considered as complete hazard maps for eastern Hispaniola. For example, we have not included hazard from earthquakes in the Mona Passage nor from large earthquakes on the subduction zone interface north of Puerto Rico. Furthermore, they do not capture all the earthquake hazards for eastern Cuba.

Open-File Report↗

Assessing contaminants of emerging concern in the Great Lakes Ecosystem: A decade of method development and practical application

Assessing the ecological risk of contaminants in the field typically involves consideration of a complex mixture of compounds which may or may not be detected via instrumental analyses. Further, there are insufficient data to predict the potential biological effects of many detected compounds, leading to their being characterized as contaminants of emerging concern (CECs). Over the past several years, advances in chemistry, toxicology, and bioinformatics have resulted in a variety of concepts and tools that can enhance the pragmatic assessment of the ecological risk of CECs. The present Focus article describes a 10+- year multiagency effort supported through the U.S. Great Lakes Restoration Initiative to assess the occurrence and implications of CECs in the North American Great Lakes. State-of-the-science methods and models were used to evaluate more than 700 sites in about approximately 200 tributaries across lakes Ontario, Erie, Huron, Michigan, and Superior, sometimes on multiple occasions. Studies featured measurement of up to 500 different target analytes in different environmental matrices, coupled with evaluation of biological effects in resident species, animals from in situ and laboratory exposures, and in vitro systems. Experimental taxa included birds, fish, and a variety of invertebrates, and measured endpoints ranged from molecular to apical responses. Data were integrated and evaluated using a diversity of curated knowledgebases and models with the goal of producing actionable insights for risk assessors and managers charged with evaluating and mitigating the effects of CECs in the Great Lakes. This overview is based on research and data captured in approximately about 90 peer-reviewed journal articles and reports, including approximately about 30 appearing in a virtual issue comprised of highlighted papers published in Environmental Toxicology and Chemistry or Integrated Environmental Assessment and Management . Environ Toxicol Chem 2023;42:2506–2518. © 2023 SETAC. This article has been contributed to by U.S. Government employees and their work is in the public domain in the USA.

Environmental Toxicology and Chemistry↗

Evaluation of conceptual models of natural organic matter (humus) from a consideration of the chemical and biochemical processes of humification

Natural organic matter (NOM) has been studied for more than 200 years because of its importance in enhancing soil fertility, soil structure, and water-holding capacity and as a carbon sink in the global carbon cycle. Two different types of models have been proposed for NOM: (1) the humic polymer models and (2) the molecular aggregate models. In the humic polymer models, NOM molecules are depicted as large (humic) polymers that have unique chemical structures that are different from those of the precursor plant degradation products. In the molecular aggregate models, NOM is depicted as being composed of molecular aggregates (supramolecular aggregates) of plant degradation products held together by non-covalent bonds. The preponderance of evidence favors the supramolecular aggregate models. These models were developed by studying the properties of NOM extracted from soils and natural waters, and as such, they provide only a very generalized picture of the structure of NOM aggregates in soils and natural waters prior to extraction. A compartmental model, in which the structure of the NOM in each of the compartments is treated separately, should provide a more accurate representation of NOM in soil and sediment systems. The proposed NOM compartments are: (1) partially degraded plant tissue, (2) biomass from microorganisms, (3) organic coatings on mineral grains, (4) pyrolytic carbon, (5) organic precipitates, and (6) dissolved organic matter (DOM) in interstitial water. Within each of these compartments there are NOM supramolecular aggregates that will be dissolved by the solvent systems that are used by researchers for extraction of NOM from soils and sediments. In natural water systems DOM may be considered as existing in two subcompartments: (1) truly dissolved DOM and (2) colloidal DOM.

Scientific Investigations Report↗

Proceedings of the Second All-USGS Modeling Conference, February 11-14, 2008: Painting the Big Picture

The Second USGS Modeling Conference was held February 11-14, 2008, in Orange Beach, Ala. Participants at the conference came from all U.S. Geological Survey (USGS) regions and represented all four science discipline - Biology, Geography, Geology, and Water. Representatives from other Department of the Interior (DOI) agencies and partners from the academic community also participated. The conference, which was focused on 'painting the big picture', emphasized the following themes: Integrated Landscape Monitoring, Global Climate Change, Ecosystem Modeling, and Hazards and Risks. The conference centered on providing a forum for modelers to meet, exchange information on current approaches, identify specific opportunities to share existing models and develop more linked and integrated models to address complex science questions, and increase collaboration across disciplines and with other organizations. Abstracts for the 31 oral presentations and more than 60 posters presented at the conference are included here. The conference also featured a field trip to review scientific modeling issues along the Gulf of Mexico. The field trip included visits to Mississippi Sandhill Crane National Wildlife Refuge, Grand Bay National Estuarine Research Reserve, the 5 Rivers Delta Resource Center, and Bon Secour National Wildlife Refuge. On behalf of all the participants of the Second All-USGS Modeling Conference, the conference organizing committee expresses our sincere appreciation for the support of field trip oganizers and leaders, including the managers from the various Reserves and Refuges. The organizing committee for the conference included Jenifer Bracewell, Sally Brady, Jacoby Carter, Thomas Casadevall, Linda Gundersen, Tom Gunther, Heather Henkel, Lauren Hay, Pat Jellison, K. Bruce Jones, Kenneth Odom, and Mark Wildhaber.

Scientific Investigations Report↗

Land cover

Documenting the distribution of land-cover types on the Arctic National Wildlife Refuge coastal plain is the foundation for impact assessment and mitigation of potential oil exploration and development. Vegetation maps facilitate wildlife studies by allowing biologists to quantify the availability of important wildlife habitats, investigate the relationships between animal locations and the distribution or juxtaposition of habitat types, and assess or extrapolate habitat characteristics across regional areas. To meet the needs of refuge managers and biologists, satellite imagery was chosen as the most cost-effective method for mapping the large, remote landscape of the 1002 Area. Objectives of our study were the following: 1) evaluate a vegetation classification scheme for use in mapping. 2) determine optimal methods for producing a satellite-based vegetation map that adequately met the needs of the wildlife research and management objectives; 3) produce a digital vegetation map for the Arctic Refuge coastal plain using Lands at-Thematic Mapper(TM) satellite imagery, existing geobotanical classifications, ground data, and aerial photographs, and 4) perform an accuracy assessment of the map.

Alaska, Northwest Territories, Yukon Territory↗

Demography of the Oregon spotted frog along a hydrologically modified river

Altered flow regimes can contribute to dissociation between life history strategies and environmental conditions, leading to reduced persistence reported for many wildlife populations inhabiting regulated rivers. The Oregon spotted frog ( Rana pretiosa ) is a threatened species occurring in floodplains, ponds, and wetlands in the Pacific Northwest with a core range in Oregon, USA. All life stages of R. pretiosa are reliant on aquatic habitats, and inundation patterns across the phenological timeline can have implications for population success. We conducted capture–mark–recapture (CMR) sampling of adult and subadult R. pretiosa at three sites along the Deschutes River downstream from two dams that regulate flows. We related the seasonal extent of inundated habitat at each site to monthly survival probabilities using a robust design CMR model. We also developed matrix projection models to simulate population dynamics into the future under current river flows. Monthly survival was strongly associated with the extent and variability of inundated habitat, suggesting some within-season fluctuations at higher water levels could be beneficial. Seasonal survival was lowest in the winter for all three sites, owing to limited water availability and the greater number of months within this season relative to other seasons. Population growth for the two river-connected sites was most strongly linked to adult survival, whereas population growth at the river-disconnected site was most strongly tied to survival in juvenile stages. This research identifies population effects of seasonally limited water and highlights conservation potential of enhancing survival of particularly influential life stages.

Oregon↗