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At least 1,315 records · Page 73Linked to original sources
USGS1993

Resource protection for waterbirds in Chesapeake Bay

Many living resources in the Chesapeake Bay estuary have deteriorated over the past 50 years. As a result, many governmental committees, task forces, and management plans have been established. Most of the recommendations for implementing a bay cleanup focus on reducing sediments and nutrient flow into the watershed. We emphasize that habitat requirements other than water quality are necessary for the recovery of much of the bay's avian wildlife, and we use a waterbird example as illustration. Some of these needs are: (1) protection of fast-eroding islands, or creation of new ones by dredge deposition to improve nesting habitat for American black ducks(Anas rubripes), great blue herons(Ardea herodias), and other associated wading birds; (2) conservation of remaining brackish marshes, especially near riparian areas, for feeding black ducks, wading birds, and wood ducks(Aix sponsa); (3) establishment of sanctuaries in open-water, littoral zones to protect feeding and/or roosting areas for diving ducks such as canvasbacks(Aythya valisineria) and redheads(Aythya americana), and for bald eagles(Haliaeetus leucocephalus); and (4) limitation of disturbance by boaters around nesting islands and open-water feeding areas. Land (or water) protection measures for waterbirds need to include units at several different spatial scales, ranging from ?points? (e.g., a colony site) to large-area resources (e.g., a marsh or tributary for feeding). Planning to conserve large areas of both land and water can be achieved following a biosphere reserve model. Existing interagency committees in the Chesapeake Bay Program could be more effective in developing such a model for wildlife and fisheries resources.

Chesapeake Bay↗
USGS2023

Validation of a species-specific probe-based qPCR assay for the threatened meltwater stonefly, Lednia tumana, in environmental samples

A probe-based quantitative real-time PCR assay was developed to detect meltwater stonefly ( Lednia tumana ) environmental (e)DNA in water samples. The limits of detection and quantification, respectively, were 12.1 and 58.4 gene copies for calibration standards and these values were similarly low in a relevant environmental sample matrix (8.6 and 174.2, respectively). The assay’s utility was demonstrated in situ on water samples with concomitant manual invertebrate surveys from a wide range of alpine streams across L. tumana ’s native range.

Conservation Genetics Resources↗
USGS2022

Explainable machine learning improves interpretability in the predictive modeling of biological stream conditions in the Chesapeake Bay Watershed, USA

Anthropogenic alterations have resulted in widespread degradation of stream conditions. To aid in stream restoration and management, baseline estimates of conditions and improved explanation of factors driving their degradation are needed. We used random forests to model biological conditions using a benthic macroinvertebrate index of biotic integrity for small, non-tidal streams (upstream area ≤200 km 2 ) in the Chesapeake Bay watershed (CBW) of the mid-Atlantic coast of North America. We utilized several global and local model interpretation tools to improve average and site-specific model inferences, respectively. The model was used to predict condition for 95,867 individual catchments for eight periods (2001, 2004, 2006, 2008, 2011, 2013, 2016, 2019). Predicted conditions were classified as Poor, FairGood, or Uncertain to align with management needs and individual reach lengths and catchment areas were summed by condition class for the CBW for each period. Global permutation and local Shapley importance values indicated percent of forest, development, and agriculture in upstream catchments had strong impacts on predictions. Development and agriculture negatively influenced stream condition for model average (partial dependence [PD] and accumulated local effect [ALE] plots) and local (individual condition expectation and Shapley value plots) levels. Friedman's H-statistic indicated large overall interactions for these three land covers, and bivariate global plots (PD and ALE) supported interactions among agriculture and development. Total stream length and catchment area predicted in FairGood conditions decreased then increased over the 19-years (length/area: 66.6/65.4% in 2001, 66.3/65.2% in 2011, and 66.6/65.4% in 2019). Examination of individual catchment predictions between 2001 and 2019 showed those predicted to have the largest decreases in condition had large increases in development; whereas catchments predicted to exhibit the largest increases in condition showed moderate increases in forest cover. Use of global and local interpretative methods together with watershed-wide and individual catchment predictions support conservation practitioners that need to identify widespread and localized patterns, especially acknowledging that management actions typically take place at individual-reach scales.

Chesapeake Bay Watershed↗
USGS2001

Cytochrome b sequences in black-crowned night-herons (Nycticorax nycticorax) from heronries exposed to genotoxic contaminants

DNA sequence analysis of a 215 base-pair region of the mitochondrial cytochrome b gene was used to examine genetic variation and search for evidence of an increased mutation rate in black-crowned night-herons. We examined five populations exposed to environmental contamination (primarily PAHs and PCBs) and one reference population from the eastern U.S. There was no evidence of a high mutation rate even within populations previously shown to exhibit increased variation in DNA content among somatic cells as a result of petroleum exposure. Three haplotypes were observed among 99 individuals. The low level of variability could be evidence for a genetic bottleneck, or that cytochrome b is too conservative for use in population genetic studies of this species. With the exception of one population from Louisiana, pair-wise Phi st estimates were very low, indicative of little population structure and potentially high rates of effective migration among populations.

Ecotoxicology↗
USGS2015

Determinants of public support for threatened and endangered species management: A case study of Cape Lookout National Seashore

Gaining public support for management actions is important to the success of public land management agencies' efforts to protect threatened and endangered species. This is especially relevant at national parks, where managers balance two aspects of their conservation mission: to protect resources and to provide for public enjoyment. This study examined variables potentially associated with support for management actions at Cape Lookout National Seashore, a unit of the National Park Service. Two visitor surveys were conducted at the park at different seasons, and a resident survey was conducted for households in Carteret County, North Carolina, where the park is located. The goal of the project was to provide park managers with information that may help with the development of communication strategies concerning the park's conservation mission. These communication strategies may help to facilitate mutual understanding and garner public support for management actions. Several variables were examined as potential determinants that park managers ought to consider when developing communication strategies. Multinomial logistic regression was applied to examine the relationships between these variables and the likelihood of support for or opposition to management actions. The variables examined included perceived shared values of park resources, general environmental attitudes, level of familiarity with park resources and regulations, knowledge about threatened and endangered species, level of trust in the decision-making process, and perceived shared values with park management. In addition, demographic variables such as income level, respondent age, residency status, and visitor type were also used. The results show that perceived values of threatened and endangered species, trust in park managers and the decision-making process, and perceived share values with park managers were among the strongest indicators of support for management actions. Different user groups also exhibited different levels of support, with groups engaged in specialized recreation activities (fishers) being the most likely to oppose management actions. While our findings are not surprising, they corroborate past research that has shown an effective communications strategy should be customized to target different audiences. In addition, management should focus on developing long-term relationships that build trust in and foster credibility of decision-making processes.

North Carolina↗
USGS2012

Total nitrogen and suspended-sediment loads and identification of suspended-sediment sources in the Laurel Hill Creek watershed, Somerset County, Pennsylvania, water years 2010-11

Laurel Hill Creek is a watershed of 125 square miles located mostly in Somerset County, Pennsylvania, with small areas extending into Fayette and Westmoreland Counties. The upper part of the watershed is on the Pennsylvania Department of Environmental Protection 303(d) list of impaired streams because of siltation, nutrients, and low dissolved oxygen concentrations. The objectives of this study were to (1) estimate the annual sediment load, (2) estimate the annual nitrogen load, and (3) identify the major sources of fine-grained sediment using the sediment-fingerprinting approach. This study by the U.S. Geological Survey (USGS) was done in cooperation with the Somerset County Conservation District. Discharge, suspended-sediment, and nutrient data were collected at two streamflow-gaging stations—Laurel Hill Creek near Bakersville, Pa., (station 03079600) and Laurel Hill Creek at Ursina, Pa., (station 03080000)—and one ungaged stream site, Laurel Hill Creek below Laurel Hill Creek Lake at Trent (station 03079655). Concentrations of nutrients generally were low. Concentrations of ammonia were less than 0.2 milligrams per liter (mg/L), and concentrations of phosphorus were less than 0.3 mg/L. Most concentrations of phosphorus were less than the detection limit of 0.02 mg/L. Most water samples had concentrations of nitrate plus nitrite less than 1.0 mg/L. At the Bakersville station, concentrations of total nitrogen ranged from 0.63 to 1.3 mg/L in base-flow samples and from 0.57 to 1.5 mg/L in storm composite samples. Median concentrations were 0.88 mg/L in base-flow samples and 1.2 mg/L in storm composite samples. At the Ursina station, concentrations of total nitrogen ranged from 0.25 to 0.92 mg/L in base-flow samples; the median concentration was 0.57 mg/L. The estimated total nitrogen load at the Bakersville station was 262 pounds (lb) for 11 months of the 2010 water year (November 2009 to September 2010) and 266 lb for the 2011 water year. Most of the total nitrogen loading was from stormflows. The stormflow load accounted for 76.6 percent of the total load for the 2010 water year and 80.6 percent of the total load for the 2011 water year. The estimated monthly total nitrogen loads were higher during the winter and spring (December through May) than during the summer (June through August). For the Bakersville station, the estimated suspended-sediment load (SSL) was 17,700 tons for 11 months of the 2010 water year (November 2009 to September 2010). The storm beginning January 24, 2010, provided 34.4 percent of the annual SSL, and the storm beginning March 10, 2010, provided 31.9 percent of the annual SSL. Together, these two winter storms provided 66 percent of the annual SSL for the 2010 water year. For the 2011 water year, the estimated annual SSL was 13,500 tons. For the 2011 water year, the SSLs were more evenly divided among storms than for the 2010 water year. Seven of 37 storms with the highest SSLs provided a total of 65.7 percent of the annual SSL for the 2011 water year; each storm provided from 4.6 to 12.3 percent of the annual SSL. The highest cumulative SSL for the 2010 and 2011 water years generally occurred during the late winter. Stormflows with the highest peak discharges generally carried the highest SSL. The sediment-fingerprinting approach was used to quantify sources of fine-grained suspended sediment in the watershed draining to the Laurel Hill Creek near Bakersville streamflow-gaging station. Sediment source samples were collected from five source types: 20 from cropland, 9 from pasture, 18 from forested areas, 20 from unpaved roads, and 23 from streambanks. At the Bakersville station, 10 suspended-sediment samples were collected during 6 storms for sediment-source analysis. Thirty-five tracers from elemental analysis and 4 tracers from stable isotope analysis were used to fingerprint the source of sediment for the 10 storm samples. Statistical analysis determined that cropland and pasture could not be discriminated by the set of tracers and were combined into one source group—agriculture. Stepwise discriminant function analysis determined that 11 tracers best described the 4 sources. An "unmixing" model applied to the 11 tracers showed that agricultural land (cropland and pasture) was the major source of sediment, contributing an average of 53 percent of the sediment for the 10 storm samples. Streambanks, unpaved roads, and forest contributions for the 10 storm samples averaged 30, 17, and 0 percent, respectively. Agriculture was the major contributor of sediment during the highest sampled stormflows. The highest stormflows also produced the highest total nitrogen and suspended-sediment loads.

Pennsylvania↗
USGS2017

Advancing mangrove macroecology

Mangrove forests provide a wide range of ecosystem services to society, yet they are among the most anthropogenically impacted coastal ecosystems in the world. In this chapter, we discuss and provide examples for how macroecology can advance our understanding of mangrove ecosystems. Macroecology is broadly defined as a discipline that uses statistical analyses to investigate large-scale, universal patterns in the distribution, abundance, diversity, and organization of species and ecosystems, including the scaling of ecological processes and structural and functional relationships. Macroecological methods can be used to advance our understanding of how non-linear responses in natural systems can be triggered by human impacts at local, regional, and global scales. Although macroecology has the potential to gain knowledge on universal patterns and processes that govern mangrove ecosystems, the application of macroecological methods to mangroves has historically been limited by constraints in data quality and availability. Here we provide examples that include evaluations of the variation in mangrove forest ecosystem structure and function in relation to macroclimatic drivers (e.g., temperature and rainfall regimes) and climate change. Additional examples include work focused upon the continental distribution of aboveground net primary productivity and carbon storage, which are rapidly advancing research areas. These examples demonstrate the value of a macroecological perspective for the understanding of global- and regional-scale effects of both changing environmental conditions and management actions on ecosystem structure, function, and the supply of goods and services. We also present current trends in mangrove modeling approaches and their potential utility to test hypotheses about mangrove structural and functional properties. Given the gap in relevant experimental work at the regional scale, we also discuss the potential use of mangrove restoration and rehabilitation projects as macroecological studies that advance the critical selection and conservation of ecosystem services when managing mangrove resources. Future work to further incorporate macroecology into mangrove research will require a concerted effort by research groups and institutions to launch research initiatives and synthesize data collected across broad biogeographic regions.

Book chapter↗
USGS2014

A systematic approach towards the identification and protection of vulnerable marine ecosystems

The United Nations General Assembly in 2006 and 2009 adopted resolutions that call for the identification and protection of vulnerable marine ecosystems (VMEs) from significant adverse impacts of bottom fishing. While general criteria have been produced, there are no guidelines or protocols that elaborate on the process from initial identification through to the protection of VMEs. Here, based upon an expert review of existing practices, a 10-step framework is proposed: (1) Comparatively assess potential VME indicator taxa and habitats in a region; (2) determine VME thresholds; (3) consider areas already known for their ecological importance; (4) compile information on the distributions of likely VME taxa and habitats, as well as related environmental data; (5) develop predictive distribution models for VME indicator taxa and habitats; (6) compile known or likely fishing impacts; (7) produce a predicted VME naturalness distribution (areas of low cumulative impacts); (8) identify areas of higher value to user groups; (9) conduct management strategy evaluations to produce trade-off scenarios; (10) review and re-iterate, until spatial management scenarios are developed that fulfil international obligations and regional conservation and management objectives. To date, regional progress has been piecemeal and incremental. The proposed 10-step framework combines these various experiences into a systematic approach.

Marine Science↗
USGS2020

Relation of fish intersex to contaminants in riverine sport fishes

Endocrine active compounds (EACs) are pollutants that have been recognized as an emerging and widespread threat to aquatic ecosystems globally. Intersex, the presence of female germ cells within a predominantly male gonad, is considered a biomarker of endocrine disruption caused by EACs. We measured a suite of EACs and assessed their associated impacts on fish intersex occurrence and severity in a large, regulated river system in North Carolina and South Carolina, USA. Our specific objective was to determine the relationship of contaminants in water, sediment, and fish tissue with the occurrence and severity of the intersex condition in wild, adult black bass ( Micropterus ), sunfish ( Lepomis ), and catfish (Ictaluridae) species at 11 sites located on the Yadkin-Pee Dee River. Polycyclic aromatic hydrocarbons (PAHs), ethinylestradiol (EE2), and heavy metals were the most prevalent contaminants that exceeded effect levels for the protection of aquatic organisms. Fish intersex condition was most frequently observed and most severe in black basses and was less frequently detected and less severe in sunfishes and catfishes. The occurrence of the intersex condition in fish showed site-related effects, rather than increasing longitudinal trends from upstream to downstream. Mean black bass and catfish tissue contaminant concentrations were higher than that of sunfish, likely because of the latter's lower trophic position in the food web. Principal component analysis identified waterborne PAHs as the most correlated environmental contaminant with intersex occurrence and severity in black bass and sunfish. As indicated by the intersex condition, EACs have adverse but often variable effects on the health of wild sport fishes in this river, likely due to fluctuations in EAC inputs and the dynamic nature of the riverine system. These findings enhance the understanding of the relationship between contaminants and fish health and provide information to guide ecologically comprehensive conservation and management decisions.

North Carolina, South Carolina↗
USGS2012

Timing and synchrony of births in bighorn sheep: implications for reintroduction and conservation

Context: Timing (mean birthdate) and synchrony (variance around that date) of births can influence survival of young and growth in ungulate populations. Some restored populations of ungulates may not adjust these life-history characteristics to environments of release sites until several years after release, which may influence success of reintroductions. Aims: We quantified timing and synchrony of births from 2005 to 2007 in four populations of reintroduced bighorn sheep ( Ovis canadensis ) occupying two ecoregions (Central Basin and Range and Wasatch and Uinta Mountains) in Utah, USA, to investigate whether bighorns would adjust these life-history characteristics to environmental conditions of the two ecoregions. We also compared timing and synchrony of births for bighorns in their source herd (Antelope Island) with bighorns in an ecologically similar release site (Stansbury Mountains) during 2006 and 2007. Methods: We relocated female bighorns to record birthdates of young, and observed groups of collared bighorns to quantify use of elevation by those ungulates. We also calculated the initiation, rate and timing of peak green-up by ecoregion, using the normalised difference vegetation index. Key results: We quantified 274 birthdates, and although only separated by 57 km, bighorn populations occupying the Central Basin and Range Mountains gave birth an average of 29 days earlier than did those on the Wasatch and Uinta Mountains, which corresponded with the initiation of vegetation green-up. Additionally, bighorn sheep on the Stansbury Mountains (ecologically similar release site) gave birth at similar times as did bighorns on Antelope Island (source area). Conclusions: Populations of bighorn sheep that were reintroduced into adjacent ecoregions adjusted timing of births to environments and green-up of vegetation in restoration areas. Timing and synchrony of births for reintroduced bighorn sheep in an ecologically similar release site were the same as those of their source area. Implications: Consideration should be given to the adjustment of timing and synchrony of births when reintroducing bighorns, especially when animals are released into different ecoregions. Also, biologists should select release sites that are ecologically similar to source areas, thereby reducing potential negative effects of animals adjusting timing and synchrony of births to environmental conditions of restoration areas.

Wildlife Research↗
USGS1995

Water quality of the Boca Raton canal system and effects of the Hillsboro Canal inflow, southeastern Florida, 1990-91

The City of Boca Raton in southeastern Palm Beach County, Florida, is an urban residential area that has sustained a constant population growth with subsequent increase in water use. The Boca Raton network of canals is controlled to provide for drainage of excess water, to maintain proper coastal ground-water levels to prevent saltwater intrusion, and to recharge the surficial aquifer system from which the city withdraws potable water. Most of the water supplied to the Boca Raton canal system and the surficial aquifer system, other than rainfall and runoff, is pumped from the Hillsboro Canal. The Biscayne aquifer, principal hydrogeologic unit of the surficial aquifer system, is highly permeable and there is a close relation between water levels in the canals and the aquifer. The amount of water supplied by seepage from the conservation areas is unknown. Because the Hillsboro Canal flows from Lake Okeechobee and Water Conservation Areas 1 and 2, which are places of more highly mineralized ground water and surface water, the canal is a possible source of contamination. Water samples were collected at 10 canal sites during wet and dry seasons and analyzed for major inorganic ions and related characteristics, nutrients, and trace elements. All concentrations were generally within or less than the drinking-water standards established by the Florida Department of Environmental Protection. The high concentrations of sodium and chloride that were detected in samples from the Boca Raton canal system are probably from the more mineralized water of the Hillsboro Canal. Other water-quality data, gathered from various sources from 1982 through 1991, did not indicate any significant changes nor trends. The data include pesticide and metal analyses of water samples and bottom sediments collected at four canal sites in the Boca Raton study area by the U.S. Geological Survey during 1982-84. The effects of the Hillsboro Canal on the water quality of the Boca Raton canal system are indicated by increased concentrations of sodium, chloride, dissolved solids, and total organic carbon. Concentrations of the constituents in the canal water generally decrease with distance from the Hillsboro Canal pumping station and are the result of dilution by receiving canal waters.

Florida↗
USGS2008

Integrated monitoring and information systems for managing aquatic invasive species in a changing climate

Changes in temperature, precipitation, and other climatic drivers and sea-level rise will affect populations of existing native and non-native aquatic species and the vulnerability of aquatic environments to new invasions. Monitoring surveys provide the foundation for assessing the combined effects of climate change and invasions by providing baseline biotic and environmental conditions, although the utility of a survey depends on whether the results are quantitative or qualitative, and other design considerations. The results from a variety of monitoring programs in the United States are available in integrated biological information systems, although many include only non-native species, not native species. Besides including natives, we suggest these systems could be improved through the development of standardized methods that capture habitat and physiological requirements and link regional and national biological databases into distributed Web portals that allow drawing information from multiple sources. Combining the outputs from these biological information systems with environmental data would allow the development of ecological-niche models that predict the potential distribution or abundance of native and non-native species on the basis of current environmental conditions. Environmental projections from climate models can be used in these niche models to project changes in species distributions or abundances under altered climatic conditions and to identify potential high-risk invaders. There are, however, a number of challenges, such as uncertainties associated with projections from climate and niche models and difficulty in integrating data with different temporal and spatial granularity. Even with these uncertainties, integration of biological and environmental information systems, niche models, and climate projections would improve management of aquatic ecosystems under the dual threats of biotic invasions and climate change

Conservation Biology↗
USGS2024

The potential for species distribution models to distinguish source populations from sinks

1. While species distribution models (SDM) are frequently used to predict species occurrences to help inform conservation management, there is limited evidence evaluating whether habitat suitability can reliably predict intrinsic growth rates or distinguish source from sink populations. Filling this knowledge gap is critical for conservation science, as applications of SDMs for management purposes ultimately depend on these typically unobserved population or metapopulation dynamics. 2. Using regression, we associate previously published population level estimates of intrinsic growth and abundance derived from a Bayesian analysis of mark-recapture data for 17 bird species found in the contiguous United States with SDM habitat suitability estimates fitted here to opportunistic data for these same species. We then use AUC to measure how well SDMs can distinguish populations categorized as sources and sinks, depending on their intrinsic growth rates estimated from the mark-recapture data. We built SDMs using two different approaches, boosted regression trees (BRT) and Generalized Linear Models (GLM), and compared their predictive performance. Each SDM was built with presence points obtained from eBird and 10 environmental variables previously selected to model intrinsic growth rates and abundance for these species. 3. We show that SDMs built with opportunistic data are poor predictors of species demography in general; both BRT and GLM explained very little spatial variation of intrinsic growth rate and population abundance (median R2 across 17 species was close to 0.1 for both SDM methods). SDMs do, however, estimate higher suitability for source populations as compared to sinks. Out of 13 species which had both source and sink populations, both BRT and GLM had AUC values greater than 0.7 for 7 species when discriminating between sources and sinks. 4. Habitat suitability have the potential to be a useful measure to indicate a population’s ability to sustain itself as a source population, however more research on a diverse set of taxa is essential to fully explore this potential. This interpretation of habitat suitability can be particularly useful for conservation practice, and identification of explicit cases of when and how SDMs fail to match population demography can be informative for advancing ecological theory.

Journal of Animal Ecology↗
USGS2015

Restored agricultural wetlands in Central Iowa: habitat quality and amphibian response

Amphibians are declining throughout the United States and worldwide due, partly, to habitat loss. Conservation practices on the landscape restore wetlands to denitrify tile drainage effluent and restore ecosystem services. Understanding how water quality, hydroperiod, predation, and disease affect amphibians in restored wetlands is central to maintaining healthy amphibian populations in the region. We examined the quality of amphibian habitat in restored wetlands relative to reference wetlands by comparing species richness, developmental stress, and adult leopard frog (Lithobates pipiens) survival probabilities to a suite of environmental metrics. Although measured habitat variables differed between restored and reference wetlands, differences appeared to have sub-lethal rather than lethal effects on resident amphibian populations. There were few differences in amphibian species richness and no difference in estimated survival probabilities between wetland types. Restored wetlands had more nitrate and alkaline pH, longer hydroperiods, and were deeper, whereas reference wetlands had more amphibian chytrid fungus zoospores in water samples and resident amphibians exhibited increased developmental stress. Restored and reference wetlands are both important components of the landscape in central Iowa and maintaining a complex of fish-free wetlands with a variety of hydroperiods will likely contribute to the persistence of amphibians in this landscape.

Iowa↗
USGS2019

A range-wide model of contemporary, omnidirectional connectivity for the threatened Mojave desert tortoise

As habitat destruction leads to species extinctions globally, conservation planning that accounts for population-level connectivity and gene flow is an urgent priority. Models that only approximate habitat potential are incomplete because areas of high habitat potential may be isolated, whereas intermixed areas of lower habitat potential may still be critical for maintaining connectivity between and among populations. We developed a range-wide, omnidirectional (‘coreless’) connectivity model and map for the threatened Mojave desert tortoise at a high spatial resolution (30 m), based on empirical movement data and a circuit-theoretic approach to estimating connectivity. Specifically, we first estimated habitat potential (i.e., quality) for tortoise movement (as distinct from habitat potential more generally) across its range using hypotheses based on the published literature, linear mixed models, multiple environmental factors derived from remotely sensed data, and recent solar and wind development footprints. The resultant raster output was used to represent landscape conductance in a circuit-theoretic model of connectivity, which relates the flow of electrical current through a circuit to the movement of tortoises through the landscape. We then modeled potential connectivity across the range of the tortoise using Circuitscape software and the Julia numerical programming language. Intermediate distances from minor roads, intermediate values of annual average maximum temperature, and increasing density of desert washes were among the strongest predictors of movement habitat quality. There was also strong evidence for increased habitat quality for movement with increasing amounts of vegetation cover. The resulting connectivity model and map was determined to accurately reflect important areas for tortoise movement, but we encourage others to do their own evaluation of the model within local areas of interest and as more data become available. Accordingly, the map can provide an important component to improve management decisions that have the potential to influence the conservation of connected desert tortoise populations throughout the range.

California↗
USGS2021

Spatial Gaussian processes improve multi-species occupancy models when range boundaries are uncertain and nonoverlapping

Species distribution models enable practitioners to analyze large datasets of encounter records and make predictions about species occurrence at unsurveyed locations. In omnibus surveys that record data on multiple species simultaneously, species ranges are often nonoverlapping and misaligned with the administrative unit defining the spatial domain of interest (e.g., a state or province). Consequently, some species display differentially restricted extents within a study area. Assuming hard boundaries based on expert opinion or published range maps to restrict species occurrence predictions implies a false sense of certainty in model-based inferences. We propose a multi-species occupancy model with a spatial Gaussian process on site-specific effects for each species as a model-based solution. Specifying informative Bayesian hyperpriors on the spatial hyperparameters encapsulates broad-scale correlation among site occupancy probabilities for each species. We fit this model to acoustic detection/nondetection data collected with autonomous recording units during summer of 2016–2019 throughout Oregon and Washington, USA, on 15 bat species. We found vast improvements in spatial predictions of spotted bat ( Euderma maculatum ), canyon bat ( Parastrellus hesperus ), and Brazilian free-tailed bat ( Tadarida brasiliensis ) when the available environmental predictors were insufficient for characterizing their restricted ranges within the region. In contrast, widespread species ( Lasionycteris noctivagans , Myotis californicus , Myotis evotis , Myotis volans ) were appropriately modeled using only environmental predictors, such as percentage forest cover and cliff and canyon cover. Utilizing spatial Gaussian processes within a community or multi-species model incorporates uncertainty in range boundaries and allows for simultaneous predictions for the entire faunal assemblage even if species have nonoverlapping or restricted ranges within a spatial domain of interest. Such modeling improvements are essential if species distribution models are to accurately inform monitoring, species recovery plans, and other conservation efforts.

Ecology and Evolution↗
USGS2022

Visualizing social-ecological intensities for management of recreation visitors in a multiuse system

Accounting for the variation of visitor conflicts and ecological disturbance of outdoor recreation activities across space and time can cause difficulty for managers seeking to make decisions in social-ecological systems (SESs). We develop a method to quantify and visualize social and ecological intensities resulting from outdoor recreation. We demonstrate the utility of our method at Valentine National Wildlife Refuge, where we conducted onsite surveys for an entire year of recreationists participating in consumptive (i.e., hunting), intermediate-consumptive (i.e., fishing) and nonconsumptive (e.g., hiking) activities. We use survey results and combine them with expert consensus by engaging refuge managers and scientists (i.e., Delphi method) to chart patterns in social (e.g., visitor conflicts) and ecological (e.g., damages to natural resources) intensities across multiple spatial and temporal scales. We highlight unexpected patterns that are revealed by collectively considering multi-activity groups through space and time and combining different survey methods (onsite, Delphi method). Based on the consensus reached using the Delphi method , the consumptive group had the greatest potential for social conflicts and ecological disturbances. Social and ecological intensities (i.e., hotspots) of recreation varied across lake types and seasons, highlighting high-intensity areas and periods on the refuge. Accounting for diverse outdoor recreation activities and coinciding social and ecological intensities will allow managers of SESs the ability to concomitantly preserve ecological resources, prioritize conservation efforts, and minimize visitor conflicts. We demonstrate the utility and ease of use of this technique, which can be implemented by managers and scientists within their respective SES of interest.

Nebraska↗
USGS1996

Denitrification and nitrogen transport in a coastal aquifer receiving wastewater discharge

Denitrification and nitrogen transport were quantified in a sandy glacial aquifer receiving wastewater from a septage-treatment facility on Cape Cod, MA. The resulting groundwater plume contained high concentrations of NO3- (32 mg of NL-1), total dissolved nitrogen (40.5 mg of N L-1), and dissolved organic carbon (1.9 mg of C L-1) and developed a central anoxic zone after 17 months of effluent discharge. Denitrifying activity was measured using four approaches throughout the major biogeochemical zones of the plume. Three approaches that maintained the structure of aquifer materials yielded comparable rates: acetylene block in intact sediment cores, 9.6 ng of N cm-3 d-1 (n = 61); in situ N2 production, 3.0 ng of N cm-3 d-1 (n = 11); and in situ NO3- depletion, 7.1 ng of N cm-3 d-1 (n = 3). In contrast, the mixing of aquifer materials using a standard slurry method yielded rates that were more than 15-fold higher (150 ng of N cm-3 d-1, n = 16) than other methods. Concentrations and ??15N of groundwater and effluent N2, NO3-, and NH4+ were consistent with the lower rates of denitrification determined by the intact-core or in situ methods. These methods and a plumewide survey of excess N2 indicate that 2-9% of the total mass of fixed nitrogen recharged to the anoxic zone of the plume was denitrified during the 34-month study period. Denitrification was limited by organic carbon (not NO3-) concentrations, as evidenced by a nitrate and carbon addition experiment, the correlation of denitrifying activity with in situ concentrations of dissolved organic carbon, and the assessments of available organic carbon in plume sediments. Carbon limitation is consistent with the observed conservative transport of 85-96% of the nitrate in the anoxic zone. Although denitrifying activity removed a significant amount (46250 kg) of fixed nitrogen during transport, the effects of aquifer denitrification on the nitrogen load to receiving ecosystems are likely to be small (<10%).

Environmental Science & Technology↗