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At least 1,315 records · Page 73Linked to original sources
USGS2021

Megafires and thick smoke portend big problems for migratory birds

In 2020, the fire season affecting the western United States reached unprecedented levels. The 116 fires active in September consumed nearly 20,822 km 2 ( https://inciweb.nwcg.gov/accessible-view/ Accessed 2020-09-29) with eighty percent of this footprint (16,567 km 2 ) from 68 fires occurring within California, Oregon, and Washington. Although the 2020 fire season was the most extreme on record, it exemplified patterns of increased wildfire size, number, timing, return frequency, and extent which are linked to climate-driven changes in precipitation and temperature affecting fire ignition and severity (Westerling 2016, Goss et al. 2020, Weber and Yadav 2020).

California, Oregon, Washington↗
USGS2018

Where have all the turtles gone, and why does it matter?

Of the 356 species of turtles worldwide, approximately 61% are threatened or already extinct. Turtles are among the most threatened of the major groups of vertebrates, in general, more so than birds, mammals, fishes or even the much besieged amphibians. Reasons for the dire situation of turtles worldwide include the familiar list of impacts to other species including habitat destruction, unsustainable overexploitation for pets and food, and climate change (many turtles have environmental sex determination). Two notable characteristics of pre-Anthropocene turtles were their massive population sizes and correspondingly high biomasses, the latter among the highest values (over 855 kilograms per hectare) ever reported for animals. As a result of their numerical dominance, turtles have played important roles as significant bioturbators of soils, infaunal miners of sea floors, dispersers and germination enhancers of seeds, nutrient cyclers, and consumers. The collapse of turtle populations on a global scale has greatly diminished their ecological roles.

BioScience↗
USGS2012

Hierarchical distance-sampling models to estimate population size and habitat-specific abundance of an island endemic

Population size and habitat-specific abundance estimates are essential for conservation management. A major impediment to obtaining such estimates is that few statistical models are able to simultaneously account for both spatial variation in abundance and heterogeneity in detection probability, and still be amenable to large-scale applications. The hierarchical distance-sampling model of J. A. Royle, D. K. Dawson, and S. Bates provides a practical solution. Here, we extend this model to estimate habitat-specific abundance and rangewide population size of a bird species of management concern, the Island Scrub-Jay ( Aphelocoma insularis ), which occurs solely on Santa Cruz Island, California, USA. We surveyed 307 randomly selected, 300 m diameter, point locations throughout the 250-km 2 island during October 2008 and April 2009. Population size was estimated to be 2267 (95% CI 1613-3007) and 1705 (1212-2369) during the fall and spring respectively, considerably lower than a previously published but statistically problematic estimate of 12 500. This large discrepancy emphasizes the importance of proper survey design and analysis for obtaining reliable information for management decisions. Jays were most abundant in low-elevation chaparral habitat; the detection function depended primarily on the percent cover of chaparral and forest within count circles. Vegetation change on the island has been dramatic in recent decades, due to release from herbivory following the eradication of feral sheep ( Ovis aries ) from the majority of the island in the mid-1980s. We applied best-fit fall and spring models of habitat-specific jay abundance to a vegetation map from 1985, and estimated the population size of A. insularis was 1400-1500 at that time. The 20-30% increase in the jay population suggests that the species has benefited from the recovery of native vegetation since sheep removal. Nevertheless, this jay's tiny range and small population size make it vulnerable to natural disasters and to habitat alteration related to climate change. Our results demonstrate that hierarchical distance-sampling models hold promise for estimating population size and spatial density variation at large scales. Our statistical methods have been incorporated into the R package unmarked to facilitate their use by animal ecologists, and we provide annotated code in the Supplement.

California↗
USGS2013

Animal migration and risk of spread of viral infections

The potential contribution of migration towards the spread of disease is as varied as the ecology of the pathogens themselves and their host populations. This chapter outlines multiple examples of viral diseases in animal populations and their mechanisms of viral spread. Many species of insects, mammals, fish, and birds exhibit migratory behavior and have the potential to disperse diseases over long distances. The majority of studies available on viral zoonoses have focused on birds and bats, due to their highly migratory life histories. A number of studies have reported evidence of changes in the timing of animal migrations in response to climate change. The majority indicate an advancement of spring migration, with few or inconclusive results for fall migration. Predicting the combined effects of climate change on migratory patterns of host species and epidemiology of viral pathogens is complex and not fully realistic.

Book chapter↗
USGS2020

Increased burning in a warming climate reduces carbon uptake in the Greater Yellowstone Ecosystem despite productivity gains

1. The effects of changing climate and disturbance on mountain forest carbon stocks vary with tree species distributions and over elevational gradients. Warming can increase carbon uptake by stimulating productivity at high elevations but also enhance carbon release by increasing respiration and the frequency, intensity, and size of wildfires. 2. To understand the consequences of climate change for temperate mountain forests, we simulated interactions among climate, wildfire, tree species, and their combined effects on regional carbon stocks in forests of the Greater Yellowstone Ecosystem, USA with the LANDIS‐II landscape change model. Simulations used historical climate and future potential climate represented by downscaled projections from five general circulation models (GCMs) that bracket the range of variability under the representative concentration pathway (RCP) 8.5 emissions scenario. 3. Total ecosystem carbon increased by 67% through 2100 in simulations with historical climate, and by 38 – 69% with GCM climate. Differences in carbon uptake among GCMs resulted primarily from variation in area burned, not productivity. Warming increased productivity by extending the growing season, especially near upper treeline, but did not offset biomass losses to fire. By 2100, simulated area burned increased by 27 – 215% under GCM climate, with the largest increases after 2050. With warming >3 °C in mean annual temperature, the increased frequency of large fires reduced live carbon stocks by 4 – 36% relative to the control, historical climate scenario. However, relative losses in total carbon were delayed under GCMs with large increases in summer precipitation and buffered by carbon retained in soils and the wood of fire‐killed trees. Increasing fire size limited seed dispersal, and reductions in soil moisture limited seedling establishment; both effects will likely constrain long‐term forest regeneration and carbon uptake. 4. Synthesis. Forests in the GYE can maintain a carbon sink through the mid‐century in a warming climate but continued warming may cause the loss of forest area, live aboveground biomass, and ultimately, ecosystem carbon. Future changes in carbon stocks in similar forests throughout western North America will depend on regional thresholds for extensive wildfire and forest regeneration and therefore, changes may occur earlier in drier regions.

Idaho, Montana, Wyoming↗
USGS2021

Evaluating natural experiments in ecology: Using synthetic controls in assessments of remotely sensed land treatments

Many important ecological phenomena occur on large spatial scales and/or are unplanned and thus do not easily fit within analytical frameworks that rely on randomization, replication, and interspersed a priori controls for statistical comparison. Analyses of such large‐scale, natural experiments are common in the health and econometrics literature, where techniques have been developed to derive insight from large, noisy observational data sets. Here, we apply a technique from this literature, synthetic control, to assess landscape change with remote sensing data. The basic data requirements for synthetic control include (1) a discrete set of treated and untreated units, (2) a known date of treatment intervention, and (3) time series response data that include both pre‐ and post‐treatment outcomes for all units. Synthetic control generates a response metric for treated units relative to a no‐action alternative based on prior relationships between treated and unexposed groups. Using simulations and a case study involving a large‐scale brush‐clearing management event, we show how synthetic control can intuitively infer treatment effect sizes from satellite data, even in the presence of confounding noise from climate anomalies, long‐term vegetation dynamics, or sensor errors. We find that accuracy depends on the number and quality of potential control units, highlighting the importance of selecting appropriate control populations. Although we consider the synthetic control approach in the context of natural experiments with remote sensing data, we expect the methodology to have wider utility in ecology, particularly for systems with large, complex, and poorly replicated experimental units.

Ecological Applications↗
USGS2022

The role of monitoring and research in the Greater Yellowstone Ecosystem in framing our understanding of the effects of disease on amphibians

Emerging infectious disease threatens amphibian biodiversity worldwide, including in landscapes that are protected from many anthropogenic stressors. We summarized data from studies in the Greater Yellowstone Ecosystem (GYE), one of the largest and most complete temperate-zone ecosystems on Earth, to assess the current state of knowledge about ranaviruses and the novel amphibian chytrid fungus (Bd) in this landscape, and to provide insight into future threats and conservation strategies. Our comprehension of these amphibian diseases in the GYE is based on >20 years of monitoring, surveys, population studies, and opportunistic observations of mortality events. Research indicates that local species are affected differently, depending on temperature, community structure, and location in the GYE. Bd has not been linked to die-offs in the GYE but evidence for ongoing reductions in survival contributes to foundational data about the effects of this pathogen in North America. Localized mortality events attributed to, or consistent with, disease from ranaviruses, are widespread in the GYE, but there is less information on how ranaviruses affect amphibian vital rates. The significance of disease in the long-term persistence of amphibians in the GYE is linked to anticipated changes in climate, especially drought. Additionally, expected increases in visitor use, and its associated impacts, have the potential to exacerbate the effects of disease. Long-term information from this large, intact landscape helps to frame our understanding of the effects of disease on amphibians and provides data that can contribute to management decisions, mitigation strategies, and forecasting efforts.

Wyoming↗
USGS2012

Assessment of boreal forest historical C dynamics in the Yukon River Basin: relative roles of warming and fire regime change

Carbon (C) dynamics of boreal forest ecosystems have substantial implications for efforts to mitigate the rise of atmospheric CO 2 and may be substantially influenced by warming and changing wildfire regimes. In this study we applied a large-scale ecosystem model that included dynamics of organic soil horizons and soil organic matter characteristics of multiple pools to assess forest C stock changes of the Yukon River Basin (YRB) in Alaska, USA, and Canada from 1960 through 2006, a period characterized by substantial climate warming and increases in wildfire. The model was calibrated for major forests with data from long-term research sites and evaluated using a forest inventory database. The regional assessment indicates that forest vegetation C storage increased by 46 Tg C, but that total soil C storage did not change appreciably during this period. However, further analysis suggests that C has been continuously lost from the mineral soil horizon since warming began in the 1970s, but has increased in the amorphous organic soil horizon. Based on a factorial experiment, soil C stocks would have increased by 158 Tg C if the YRB had not undergone warming and changes in fire regime. The analysis also identified that warming and changes in fire regime were approximately equivalent in their effects on soil C storage, and interactions between these two suggests that the loss of organic horizon thickness associated with increases in wildfire made deeper soil C stocks more vulnerable to loss via decomposition. Subbasin analyses indicate that C stock changes were primarily sensitive to the fraction of burned forest area within each subbasin and that boreal forest ecosystems in the YRB are currently transitioning from being sinks to sources at ∼0.7% annual area burned. We conclude that it is important for international mitigation efforts focused on controlling atmospheric CO 2 to consider how climate warming and changes in fire regime may concurrently affect the CO 2 sink strength of boreal forests. It is also important for large-scale biogeochemical and earth system models to include organic soil dynamics in applications to assess regional C dynamics of boreal forests responding to warming and changes in fire regime.

Ecological Applications↗
USGS2008

Mapping "old" versus "young" piñon-juniper stands with a predictive topo-climatic model in north-central New Mexico, USA

Piñon pine and juniper woodlands in the southwestern United States are often represented as an expanding and even invasive vegetation type, a legacy of historic grazing, and culpable in the degradation of western rangelands. A long-standing emphasis on forage production, in combination with recent hazard fuel concerns, has prompted a new era of woodland management with stated restoration objectives. Yet the extent and dynamics of piñon–juniper communities that predate intensive Euro-American settlement activities are poorly known or understood, while the intrinsic ecological, aesthetic, and economic values of old-growth woodlands are often overlooked. Historical changes in piñon–juniper stands include two related, but poorly differentiated processes: recent tree expansion into grass- or shrub-dominated (i.e., non-woodland) vegetation and thickening or infilling of savanna or mosaic woodlands predating settlement. Our work addresses the expansion pattern, modeling the occurrence of “older” savanna and woodland stands extant prior to 1850 in contrast to “younger” piñon–juniper growth of more recent, postsettlement origin. We present criteria in the form of a diagnostic key for distinguishing “older,” pre-Euro-American settlement piñon–juniper from “younger” (post-1850) stands and report results of predictive modeling and mapping efforts within a north-central New Mexico study area. Selected models suggest a primary role for soil moisture in the current distribution of “old” vs. “young” piñon–juniper stands. Presettlement era woodlands are shown to occupy a discrete ecological space, defined by the interaction of effective (seasonal) moisture with landform setting and fine-scale (soil/water) depositional patterns. “Older” stands are generally found at higher elevations or on skeletal soils in upland settings, while “younger” stands (often dominated by one-seed juniper, Juniperus monosperma ) are most common at lower elevations or in productive, depositional settings. Modeling at broad regional scales can enhance our general understanding of piñon–juniper ecology, while predictive mapping of local areas has potential to provide products useful for land management. Areas of the southwestern United States with strong monsoonal (summer moisture) patterns appear to have been the most susceptible to historical woodland expansion, but even here the great majority of extant piñon–juniper has presettlement origins (although widely thickened and infilled historically), and old-growth structure is not uncommon in appropriate upland settings.

Ecological Applications↗
USGS2020

Intraspecific variation in surface water uptake in a perennial desert shrub

Despite broad recognition that water is a major limiting factor in arid ecosystems, we lack an empirical understanding of how this resource is shared and distributed among neighbouring plants. Intraspecific variability can further contribute to this variation via divergent life‐history traits, including root architecture. We investigated these questions in the shrub Artemisia tridentata and hypothesized that the ability to access and utilize surface water varies among subspecies and cytotypes. We used an isotope tracer to quantify below‐ground zone of influence in A. tridentata , and tested whether spatial neighbourhood characteristics can alter plant water uptake. We introduced deuterium‐enriched water to the soil in plant interspaces in a common garden experiment and measured deuterium composition of plant stems. We then applied spatially explicit models to test for differential water uptake by A. tridentata , including intermingled populations of three subspecies and two ploidy levels. The results suggest that lateral root functioning in A. tridentata is associated with intraspecific identity and ploidy level. Subspecies adapted to habitats with deep soils generally had a smaller horizontal reach, and polyploid cytotypes were associated with greater water uptake compared to their diploid variants. We also found that plant crown volume was a weak predictor of water uptake, and that neighbourhood crowding had no discernable effect on water uptake. Intraspecific variation in lateral root functioning can lead to differential patterns of resource acquisition, an essential process in arid ecosystems in the contexts of changing climate and seasonal patterns of precipitation. Altogether, we found that lateral root development and activity are more strongly related to genetic variability within A. tridentata than to plant size. Our study highlights how intraspecific variation in life strategies is linked to mechanisms of resource acquisition.

Functional Ecology↗
USGS2012

The footprint of Alaskan tundra fires during the past half-century: implications for surface properties and radiative forcing

Recent large and frequent fires above the Alaskan arctic circle have forced a reassessment of the ecological and climatological importance of fire in arctic tundra ecosystems. Here we provide a general overview of the occurrence, distribution, and ecological and climate implications of Alaskan tundra fires over the past half-century using spatially explicit climate, fire, vegetation and remote sensing datasets for Alaska. Our analyses highlight the importance of vegetation biomass and environmental conditions in regulating tundra burning, and demonstrate that most tundra ecosystems are susceptible to burn, providing the environmental conditions are right. Over the past two decades, fire perimeters above the arctic circle have increased in size and importance, especially on the North Slope, indicating that future wildfire projections should account for fire regime changes in these regions. Remote sensing data and a literature review of thaw depths indicate that tundra fires have both positive and negative implications for climatic feedbacks including a decadal increase in albedo radiative forcing immediately after a fire, a stimulation of surface greenness and a persistent long-term (>10 year) increase in thaw depth. In order to address the future impact of tundra fires on climate, a better understanding of the control of tundra fire occurrence as well as the long-term impacts on ecosystem carbon cycling will be required.

Alaska↗
USGS2007

Climate change and forests of the future: Managing in the face of uncertainty

We offer a conceptual framework for managing forested ecosystems under an assumption that future environments will be different from present but that we cannot be certain about the specifics of change. We encourage flexible approaches that promote reversible and incremental steps, and that favor ongoing learning and capacity to modify direction as situations change. We suggest that no single solution fits all future challenges, especially in the context of changing climates, and that the best strategy is to mix different approaches for different situations. Resources managers will be challenged to integrate adaptation strategies (actions that help ecosystems accommodate changes adaptively) and mitigation strategies (actions that enable ecosystems to reduce anthropogenic influences on global climate) into overall plans. Adaptive strategies include resistance options (forestall impacts and protect highly valued resources), resilience options (improve the capacity of ecosystems to return to desired conditions after disturbance), and response options (facilitate transition of ecosystems from current to new conditions). Mitigation strategies include options to sequester carbon and reduce overall greenhouse gas emissions. Priority-setting approaches (e.g., triage), appropriate for rapidly changing conditions and for situations where needs are greater than available capacity to respond, will become increasingly important in the future. ?? 2007 by the Ecological Society of America.

Ecological Applications↗
USGS2003

Evolution of CAM and C 4 carbon-concentrating mechanisms

Mechanisms for concentrating carbon around the Rubisco enzyme, which drives the carbon-reducing steps in photosynthesis, are widespread in plants; in vascular plants they are known as crassulacean acid metabolism (CAM) and C 4 photosynthesis. CAM is common in desert succulents, tropical epiphytes, and aquatic plants and is characterized by nighttime fixation of CO2. The proximal selective factor driving the evolution of this CO2-concentrating pathway is low daytime CO2, which results from the unusual reverse stomatal behavior of terrestrial CAM species or from patterns of ambient CO2 availability for aquatic CAM species. In terrestrials the ultimate selective factor is water stress that has selected for increased water use efficiency. In aquatics the ultimate selective factor is diel fluctuations in CO2 availability for palustrine species and extreme oligotrophic conditions for lacustrine species. C4 photosynthesis is based on similar biochemistry but carboxylation steps are spatially separated in the leaf rather than temporally as in CAM. This biochemical pathway is most commonly associated with a specialized leaf anatomy known as Kranz anatomy; however, there are exceptions. The ultimate selective factor driving the evolution of this pathway is excessively high photorespiration that inhibits normal C3 photosynthesis under high light and high temperature in both terrestrial and aquatic habitats. CAM is an ancient pathway that likely has been present since the Paleozoic era in aquatic species from shallow-water palustrine habitats. While atmospheric CO2 levels have undoubtedly affected the evolution of terrestrial plant carbon-concentrating mechanisms, there is reason to believe that past atmospheric changes have not played as important a selective role in the aquatic milieu since palustrine habitats today are not generally carbon sinks, and the selective factors driving aquatic CAM are autogenic. Terrestrial CAM, in contrast, is of increasing selective value under extreme water deficits, and undoubtedly, high Mesozoic CO2 levels reduced the amount of landscape perceived by plants as water limited. Late Tertiary and Quaternary reductions in atmospheric CO2, coupled with increasing seasonality, were probably times of substantial species radiation and ecological expansion for CAM plants. C4 photosynthesis occurs in only about half as many families as CAM, and three-fourths of C4 species are either grasses or sedges. Molecular phylogenies indicate C4 is a more recent innovation than CAM and that it originated in the mid-Tertiary, 20–30 Ma, although some data support an earlier origin. While the timing of the origin of C4 remains controversial, the nearly explosive increase in C4 species is clearly documented in the late Miocene, 4–7 Ma. Increasing seasonality has been widely suggested as an important climatic stimulus for this C4 expansion. Alternatively, based on models of photosynthetic quantum yield at different temperatures and CO2 concentration, it has been hypothesized that the late Miocene C4 expansion resulted from declining atmospheric CO2 levels. This model is most appropriate for explaining the transition from C3 grasslands to C4 grasslands but by itself may not be sufficient to explain the more likely scenario of a late Miocene transition from C3 woodland/ savanna to C4 grasslands. A largely unexplored hypothesis is that climatic changes in late Miocene altered disturbance regimes, in particular the incidence of fires, which today are often associated with maintenance of C4 grasslands. Oceanic charcoal sediments that appear to represent Aeolian deposits from continental wildfires follow a strikingly similar pattern of explosive increase in late Miocene. Climate, CO2, and disturbance are not mutually exclusive explanations and probably all acted in concert to promote the expansion of C4 grasslands. More recently, late Quaternary changes in CO2 may have been responsible for driving major changes in the landscape distribution of C4 species. The theory is sound; however, many of the studies cited in support of this model are open to alternative interpretations, and none has eliminated climatic factors as important selective agents. CAM and C4 evolution required coupling of biochemical pathways with structural changes in photosynthetic tissues, succulence in CAM and Kranz in C4. This was apparently accomplished by piecemeal evolution beginning with mechanisms for recapturing respiratory CO2, although this need not have been so in aquatic CAM species. It has been proposed that the extreme rarity of both pathways in the same plant results from biochemical and structural incompatibilities (Sage 2002). Equally important is the fact that the selective environments are quite different, with CAM evolution thriving on stressful sites inhospitable to C3 species whereas C4 evolution has selected for rapid growth capable of outcompeting associated C3 plants.

International Journal of Plant Sciences↗
USGS2020

The relationship between biodiversity and wetland cover varies across regions of the conterminous United States

Identifying the factors that determine the spatial distribution of biodiversity is a major focus of ecological research. These factors vary with scale from interspecific interactions to global climatic cycles. Wetlands are important biodiversity hotspots and contributors of ecosystem services, but the association between proportional wetland cover and species richness has shown mixed results. It is not well known as to what extent there is a relationship between proportional wetland cover and species richness, especially at the sub-continental scale. We used the National Wetlands Inventory to model wetland cover for the conterminous United States and the National Land Cover Database to estimate wetland change between 2001 and 2011. We used a Bayesian spatial Poisson model to estimate a spatially varying coefficient surface describing the effect of proportional wetland cover on the distribution of amphibians, birds, mammals, and reptiles and the cumulative distribution of terrestrial endemic species. Species richness and wetland cover were significantly correlated, and this relationship varied both spatially and by taxonomic group. Rather than a continental-scale association, however, we found that this relationship changed more closely among ecoregions. The species richness of each of the five groups was positively associated with wetland cover in some or all of the Great Plains; additionally, a positive association was found for mammals in the Southeastern Plains and Piedmont of the eastern U.S. Model results indicated negative association especially in the Cold Deserts and Northern Lakes & Forests of Minnesota and Wisconsin, though these varied greatly between groups. Our results highlight the need for wetland conservation initiatives that focus efforts at the level II and III ecoregional scale rather than along political boundaries.

PLoS ONE↗
USGS2013

U.S. Geological Survey environmental health science strategy — Providing environmental health science for a changing world

Executive Summary America has an abundance of natural resources. We have bountiful clean water, fertile soil, and unrivaled national parks, wildlife refuges, and public lands. These resources enrich our lives and preserve our health and wellbeing. These resources have been maintained because of our history of respect for their value and an enduring commitment to their vigilant protection. Awareness of the social, economic, and personal value of the health of our environment is increasing. The emergence of environmentally driven diseases caused by exposure to contaminants and pathogens is a growing concern worldwide. New health threats and patterns of established threats are affected by both natural and anthropogenic changes to the environment. Human activities are key drivers of emerging (new and re-emerging) health threats. Societal demands for land and natural resources, quality of life, and economic prosperity lead to environmental change. Natural earth processes, climate trends, and related climatic events will compound the environmental impact of human activities. These environmental drivers will influence exposure to disease agents, including viral, bacterial, prion, and fungal pathogens, parasites, synthetic chemicals and substances, natural earth materials, toxins, and other biogenic compounds. The U.S. Geological Survey (USGS) defines environmental health science broadly as the interdisciplinary study of relations among the quality of the physical environment, the health of the living environment, and human health. The interactions among these three spheres are driven by human activities, ecological processes, and natural earth processes; the interactions affect exposure to contaminants and pathogens and the severity of environmentally driven diseases in animals and people. This definition provides USGS with a framework for synthesizing natural science information from across the Bureau and providing it to environmental, natural resource, agricultural, and public health managers. USGS specializes in science at the environment-health interface, by characterizing the processes that affect the interaction among the physical environment, the living environment, and people, and the resulting factors that affect ecological and human exposure to disease agents. The USGS is a Federal science agency with a broad range of natural science expertise relevant to environmental health. USGS provides scientific information and tools as a scientific basis for management and policy decisionmaking. This report describes a 10-year strategy that encompasses the portfolio of USGS environmental health science. It summarizes national environmental health priorities that USGS is best suited to address, and will serve as a strategic framework for USGS environmental health science goals, actions, and outcomes for the next decade. Implementation of this strategy is intended to aid coordination of USGS environmental health activities and to provide a focal point for disseminating information to stakeholders. The “One Health” paradigm advocated by the World Health Organization (WHO; World Health Organization, 2011), and the American Veterinary Medical Association (AVMA; American Veterinary Medical Association, 2008), among others, is based on a general recognition that the health of humans, animals, and the environment are inextricably linked. Thus, successful efforts to protect that health will require increased interdisciplinary research and increased communication and collaboration among the broader scientific and health community. This strategy is built upon that paradigm.

Circular↗
USGS2017

U.S. Geological Survey Cooperative Fish and Wildlife Research Units Program—2016–2017 Research Abstracts

The U.S. Geological Survey (USGS) has several strategic goals that focus its efforts on serving the American people. The USGS Ecosystems Mission Area has responsibility for the following objectives under the strategic goal of “Science to Manage and Sustain Resources for Thriving Economies and Healthy Ecosystems”: Understand, model, and predict change in natural systems Conserve and protect wildlife and fish species and their habitats Reduce or eliminate the threat of invasive species and wildlife disease This report provides abstracts of the majority of ongoing research investigations of the USGS Cooperative Fish and Wildlife Research Units program and is intended to complement the 2016 Cooperative Research Units Program Year in Review Circular 1424 ( https://doi.org/10.3133/cir1424 ). The report is organized by the following major science themes that contribute to the objectives of the USGS: Advanced Technologies Climate Science Decision Science Ecological Flows Ecosystem Services Endangered Species Conservation, Recovery, and Proactive Strategies Energy Human Dimensions Invasive Species Landscape Ecology Species of Greatest Conservation Need Species Population, Habitat, and Harvest Management Wildlife Health and Disease

Circular↗
USGS2006

Effects of historical climate change, habitat connectivity, and vicariance on genetic structure and diversity across the range of the Red Tree Vole (Phenacomys longicaudus) in the Pacific Northwest United States

Phylogeographical analyses conducted in the Pacific Northwestern United States have often revealed concordant patterns of genetic diversity among taxa. These studies demonstrate distinct North/South genetic discontinuities that have been attributed to Pleistocene glaciation. We examined phylogeographical patterns of red tree voles (Phenacomys longicaudus) in western Oregon by analysing mitochondrial control region sequences for 169 individuals from 18 areas across the species' range. Cytochrome b sequences were also analysed from a subset of our samples to confirm the presence of major haplotype groups. Phylogenetic network analyses suggested the presence of two haplotype groups corresponding to northern and southern regions of P. longicaudus' range. Spatial genetic analyses (samova and Genetic Landscape Shapes) of control region sequences demonstrated a primary genetic discontinuity separating northern and southern sampling areas, while a secondary discontinuity separated northern sampling areas into eastern and western groups divided by the Willamette Valley. The North/South discontinuity likely corresponds to a region of secondary contact between lineages rather than an overt barrier. Although the Cordilleran ice sheet (maximum a??12 000 years ago) did not move southward to directly affect the region occupied by P. longicaudus, climate change during glaciation fragmented the forest landscape that it inhabits. Signatures of historical fragmentation were reflected by positive associations between latitude and variables such as Tajima's D and patterns associated with location-specific alleles. Genetic distances between southern sampling areas were smaller, suggesting that forest fragmentation was reduced in southern vs. northern regions.

Molecular Ecology↗
USGS2019

Managing effects of drought and other water resource challenges in Alaska and the Pacific Northwest

This is a Cooperator Report. As such, there is no specific abstract. The physical, ecological, and social environments of Alaska and the Pacific Northwest (PNW) region of the United States are extremely diverse. Alaska ranges from the Arctic Ocean and the very cold, dry environments of the North Slope to the cool and very rainy coastal North Pacific region of Southeast Alaska. Most precipitation falls as snow at higher elevations. In Arctic Alaska, average annual temperature is 14.6 F, and average annual precipitation is 11 inches. By contrast, in Southeast Alaska, average annual temperature is 35.8 F, and annual average precipitation is 143 inches. The PNW, defined here as Idaho, Oregon, and Washington, ranges from the Pacific Coast (annual precipitation of 200 inches) to interior semi-arid regions (annual precipitation of 8 inches). Precipitation patterns in the PNW are strongly governed by orographic phenomena, with high, persistent snowpack in the higher mountains (e.g., record annual snowfall of 1,130 in at Mount Baker, Washington in 1999-2000). Ecosystems in the PNW include productive temperate coniferous forests near the Pacific coast and along the (wet) west slope of the Cascade Range, less productive mixed-conifer forest along the (dry) east slope of the Cascades and in interior mountain ranges, and sagebrush-steppe and shrublands at lower elevations in much of the interior and mountain valleys. Large rivers and thousands of smaller tributaries form an extensive network of riparian, wetland, and estuarine systems that provide both critical hydrologic function and biological diversity at broad and fine spatial scales. Although Alaska and the Pacific Northwest differ in important physical, ecological, and social features, the importance of natural resources is evident in both regions. Water is important for wildlife and people. Water provides critical habitat for salmon, which are culturally and economically valuable species. Timber production has declined in recent decades. Recreation has emerged as a major revenue source.

Alaska, Oregon, Washington↗