SEARCH · USGS Science

Results for “Aquatic Sciences”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,315 records · Page 73Linked to original sources

USGS2021

Predicting the spatiotemporal exposure of aquatic species to intrusions of fire retardant in streams with limited data

Because fire retardant can enter streams and harm aquatic species including endangered fish, agencies such as the U.S. Forest Service (USFS) must estimate the downstream extent of toxic effects every time fire retardant enters streams (denoted as an “intrusion”). A challenge in estimating the length of stream affected by the intrusion and the exposure time of species in the affected reach is the lack of data typically available on the stream's geometry and flow characteristics. Previously, the USFS estimated the affected reach length assuming instantaneous mixing of the retardant over the reach; however, this approach neglects key river mixing processes. An approach is described that accounts for advection and dispersion of the retardant as well as the downstream growth of the stream. Applied to 13 intrusions documented by the USFS, the new approach shows affected reach lengths range between 8.0 and 362 km; all 13 cases exceeded previous estimates from an instantaneous mixing model. The time that a stationary individual in the affected reach is exposed to concentrations above a pre-defined toxicity threshold (10% of 96-hour LC 50 , for example) ranges from 0.17 to 2.73 h, with all but one case having a maximum exposure time less than 1.5 h. Results from 1152 hypothetical intrusions provided by the USFS confirm that exposure times rarely exceed 5 h. This result suggests that 96-hour tests to determine toxicity (LC 50 ) to various species should be reconsidered. Although the approach described can be improved in several ways, it provides a first estimate of the effects of fire retardant intrusions.

Science of the Total Environment↗

USGS2014

Sampling trace organic compounds in water: a comparison of a continuous active sampler to continuous passive and discrete sampling methods

A continuous active sampling method was compared to continuous passive and discrete sampling methods for the sampling of trace organic compounds (TOCs) in water. Results from each method are compared and contrasted in order to provide information for future investigators to use while selecting appropriate sampling methods for their research. The continuous low-level aquatic monitoring (CLAM) sampler (C.I.Agent® Storm-Water Solutions) is a submersible, low flow-rate sampler, that continuously draws water through solid-phase extraction media. CLAM samplers were deployed at two wastewater-dominated stream field sites in conjunction with the deployment of polar organic chemical integrative samplers (POCIS) and the collection of discrete (grab) water samples. All samples were analyzed for a suite of 69 TOCs. The CLAM and POCIS samples represent time-integrated samples that accumulate the TOCs present in the water over the deployment period (19–23 h for CLAM and 29 days for POCIS); the discrete samples represent only the TOCs present in the water at the time and place of sampling. Non-metric multi-dimensional scaling and cluster analysis were used to examine patterns in both TOC detections and relative concentrations between the three sampling methods. A greater number of TOCs were detected in the CLAM samples than in corresponding discrete and POCIS samples, but TOC concentrations in the CLAM samples were significantly lower than in the discrete and (or) POCIS samples. Thirteen TOCs of varying polarity were detected by all of the three methods. TOC detections and concentrations obtained by the three sampling methods, however, are dependent on multiple factors. This study found that stream discharge, constituent loading, and compound type all affected TOC concentrations detected by each method. In addition, TOC detections and concentrations were affected by the reporting limits, bias, recovery, and performance of each method.

Science of the Total Environment↗

USGS2010

A fresh look at road salt: Aquatic toxicity and water-quality impacts on local, regional, and national scales

A new perspective on the severity of aquatic toxicity impact of road salt was gained by a focused research effort directed at winter runoff periods. Dramatic impacts were observed on local, regional, and national scales. Locally, samples from 7 of 13 Milwaukee, Wisconsin area streams exhibited toxicity in Ceriodaphnia dubia and Pimephales promelas bioassays during road-salt runoff. Another Milwaukee stream was sampled from 1996 to 2008 with 72% of 37 samples exhibiting toxicity in chronic bioassays and 43% in acute bioassays. The maximum chloride concentration was 7730 mg/L. Regionally, in southeast Wisconsin, continuous specific conductance was monitored as a chloride surrogate in 11 watersheds with urban land use from 6.0 to 100%. Elevated specific conductance was observed between November and April at all sites, with continuing effects between May and October at sites with the highest specific conductance. Specific conductance was measured as high as 30 800 ??S/cm (Cl = 11 200 mg/L). Chloride concentrations exceeded U.S. Environmental Protection Agency (USEPA) acute (860 mg/L) and chronic (230 mg/L) water-quality criteria at 55 and 100% of monitored sites, respectively. Nationally, U.S. Geological Survey historical data were examined for 13 northern and 4 southern metropolitan areas. Chloride concentrations exceeded USEPA water-quality criteria at 55% (chronic) and 25% (acute) of the 168 monitoring locations in northern metropolitan areas from November to April. Only 16% (chronic) and 1% (acute) of sites exceeded criteria from May to October. At southern sites, very few samples exceeded chronic water-quality criteria, and no samples exceeded acute criteria. ?? 2010 American Chemical Society.

Environmental Science & Technology↗

USGS2013

Streams in the urban heat island: spatial and temporal variability in temperature

Streams draining urban heat islands tend to be hotter than rural and forested streams at baseflow because of warmer urban air and ground temperatures, paved surfaces, and decreased riparian canopy. Urban infrastructure efficiently routes runoff over hot impervious surfaces and through storm drains directly into streams and can lead to rapid, dramatic increases in temperature. Thermal regimes affect habitat quality and biogeochemical processes, and changes can be lethal if temperatures exceed upper tolerance limits of aquatic fauna. In summer 2009, we collected continuous (10-min interval) temperature data in 60 streams spanning a range of development intensity in the Piedmont of North Carolina, USA. The 5 most urbanized streams averaged 21.1°C at baseflow, compared to 19.5°C in the 5 most forested streams. Temperatures in urban streams rose as much as 4°C during a small regional storm, whereas the same storm led to extremely small to no changes in temperature in forested streams. Over a kilometer of stream length, baseflow temperature varied by as much as 10°C in an urban stream and as little as 2°C in a forested stream. We used structural equation modeling to explore how reach- and catchment-scale attributes interact to explain maximum temperatures and magnitudes of storm-flow temperature surges. The best predictive model of baseflow temperatures (R 2 = 0.461) included moderately strong pathways directly (extent of development and road density) and indirectly, as mediated by reach-scale factors (canopy closure and stream width), from catchment-scale factors. The strongest influence on storm-flow temperature surges appeared to be % development in the catchment. Reach-scale factors, such as the extent of riparian forest and stream width, had little mitigating influence (R 2 = 0.448). Stream temperature is an essential, but overlooked, aspect of the urban stream syndrome and is affected by reach-scale habitat variables, catchment-scale urbanization, and stream thermal regimes.

Freshwater Science↗

USGS2025

Long-term patterns in growth of White Sturgeon in the Sacramento-San Joaquin River basin, California.

Introduction: The Sacramento-San Joaquin River system (SSJ) of California includes both riverine, delta, and estuarine habitats and is among the most modified aquatic ecosystems in the United States. Water development projects in the system are associated with declines of many native species, including White Sturgeon Acipenser transmontanus . Methods: We used White Sturgeon pectoral fin rays collected from 1983 to 2016 throughout the SSJ to assess long-term changes in growth and associations with thermal and hydrological conditions (i.e., temperature, discharge, salinity). Age and growth were estimated from 1,897 White Sturgeon varying in fork length from 25 to 210 cm and from age 0 to 33. Results: Age structure varied through time with the oldest fish generally sampled during the mid-1980s. Growth of White Sturgeon in 1951–1970 was slower than growth of fish in 1971–1990 and 1991–2012. Growth of White Sturgeon during 1991–2012 was ~10% higher than during other time periods. Discussion: Little variation in growth was explained by environmental covariates, suggesting that annual growth was likely influenced by factors not measured in our study. Alternatively, population structure and movement behavior of White Sturgeon in the SSJ may be such that the scale (i.e., spatial or temporal) of available habitat covariates was mismatched to the scale at which growth of White Sturgeon responds. Increased growth in recent times may be partly due to density-dependent processes in association with substantial declines in White Sturgeon population abundance over the last several decades. This research provides important information on long-term patterns in growth that contributes to the conservation and management of White Sturgeon in the SSJ and beyond.

California↗

USGS2026

Widespread reproductive deficits in Chesapeake Bay ospreys

Introduction: Ospreys ( Pandion haliaetus ) are well-known sentinels of aquatic ecosystem health and are indicators of both environmental contaminants and fish stocks. The Chesapeake Bay supports one of the largest osprey breeding populations in the world, but recent studies have documented declining reproductive performance and increasing food stress in some portions of the estuary. Methods: We monitored osprey nests (N = 571) throughout the Chesapeake Bay during the 2024 breeding season and compared breeding metrics between high-salinity (>10 parts per thousand [ppt]) and low-salinity (<5 ppt) study areas. We also compared contemporary breeding performance within four high-salinity sites to historical data collected during the 1980s. Results: Salinity was strongly associated with breeding performance and the likelihood that pairs achieved productivity levels required for population maintenance. All high-salinity study areas functioned as demographic sinks, whereas low-salinity areas functioned as demographic sources. Breeding metrics including the proportion of pairs breeding, clutch size, nesting failure, brood reduction, and nestling loss all suggested greater food stress within high-salinity areas. Temporal comparisons documented substantial declines in reproductive performance between the 1980s and 2024 within high-salinity study sites. High-salinity sites during the 1980s exhibited breeding performance comparable to low-salinity sites in 2024. Discussion: Although several factors may influence osprey productivity within the Chesapeake Bay, we suggest that reduced availability of Atlantic menhaden ( Brevoortia tyrannus ) is a primary driver of poor reproductive performance within high-salinity waters.

Maryland, Virginia↗

USGS2002

Atmospheric mercury deposition during the last 270 years: A glacial ice core record of natural and anthropogenic sources

Mercury (Hg) contamination of aquatic ecosystems and subsequent methylmercury bioaccumulation are significant environmental problems of global extent. At regional to global scales, the primary mechanism of Hg contamination is atmospheric Hg transport. Thus, a better understanding of the long-term history of atmospheric Hg cycling and quantification of the sources is critical for assessing the regional and global impact of anthropogenic Hg emissions. Ice cores collected from the Upper Fremont Glacier (UFG), Wyoming, contain a high-resolution record of total atmospheric Hg deposition (ca. 1720−1993). Total Hg in 97 ice-core samples was determined with trace-metal clean handling methods and low-level analytical procedures to reconstruct the first and most comprehensive atmospheric Hg deposition record of its kind yet available from North America. The record indicates major atmospheric releases of both natural and anthropogenic Hg from regional and global sources. Integrated over the past 270-year ice-core history, anthropogenic inputs contributed 52%, volcanic events 6%, and background sources 42%. More significantly, during the last 100 years, anthropogenic sources contributed 70% of the total Hg input. Unlike the 2−7-fold increase observed from preindustrial times (before 1840) to the mid-1980s in sediment-core records, the UFG record indicates a 20-fold increase for the same period. The sediment-core records, however, are in agreement with the last 10 years of this ice-core record, indicating declines in atmospheric Hg deposition.

Environmental Science & Technology↗

USGS2010

Antidepressant pharmaceuticals in two U.S. effluent-impacted streams: Occurrence and fate in water and sediment and selective uptake in fish neural tissue

Antidepressant pharmaceuticals are widely prescribed in the United States; release of municipal wastewater effluent is a primary route introducing them to aquatic environments, where little is known about their distribution and fate. Water, bed sediment, and brain tissue from native white suckers (Catostomus commersoni)were collected upstream and atpoints progressively downstream from outfalls discharging to two effluentimpacted streams, Boulder Creek (Colorado) and Fourmile Creek (Iowa). A liquid chromatography/tandem mass spectrometry method was used to quantify antidepressants, including fluoxetine, norfluoxetine (degradate), sertraline, norsertraline (degradate), paroxetine, Citalopram, fluvoxamine, duloxetine, venlafaxine, and bupropion in all three sample matrices. Antidepressants were not present above the limit of quantitation in water samples upstream from the effluent outfalls but were present at points downstream at ng/L concentrations, even at the farthest downstream sampling site 8.4 km downstream from the outfall. The antidepressants with the highest measured concentrations in both streams were venlafaxine, bupropion, and Citalopram and typically were observed at concentrations of at least an order of magnitude greater than the more commonly investigated antidepressants fluoxetine and sertraline. Concentrations of antidepressants in bed sediment were measured at ng/g levels; venlafaxine and fluoxetine were the predominant chemicals observed. Fluoxetine, sertraline, and their degradates were the principal antidepressants observed in fish brain tissue, typically at low ng/g concentrations. Aqualitatively different antidepressant profile was observed in brain tissue compared to streamwater samples. This study documents that wastewater effluent can be a point source of antidepressants to stream ecosystems and that the qualitative composition of antidepressants in brain tissue from exposed fish differs substantially from the compositions observed in streamwater and sediment, suggesting selective uptake.

Colorado, Iowa↗

USGS2023

Energy-related wastewater contamination alters microbial communities of sediment, water, and amphibian skin

To inform responsible energy development, it is important to understand the ecological effects of contamination events. Wastewaters, a common byproduct of oil and gas extraction, often contain high concentrations of sodium chloride (NaCl) and heavy metals (e.g., strontium and vanadium). These constituents can negatively affect aquatic organisms, but there is scarce information for how wastewaters influence potentially distinct microbiomes in wetland ecosystems . Additionally, few studies have concomitantly investigated effects of wastewaters on the habitat (water and sediment) and skin microbiomes of amphibians or relationships among these microbial communities. We sampled microbiomes of water, sediment, and skin of four larval amphibian species across a gradient of chloride contamination (0.04–17,500 mg/L Cl) in the Prairie Pothole Region of North America. We detected 3129 genetic phylotypes and 68 % of those phylotypes were shared among the three sample types. The most common shared phylotypes were Proteobacteria, Firmicutes, and Bacteroidetes. Salinity of wastewaters increased dissimilarity within all three microbial communities, but not the diversity or richness of water and skin microbial communities. Strontium was associated with lower diversity and richness of sediment microbial communities, but not those of water or amphibian skin, likely because metal deposition occurs in sediment when wetlands dry. Based on Bray Curtis distance matrices, sediment microbiomes were similar to those of water, but neither had substantial overlap with amphibian microbiomes. Species identity was the strongest predictor of amphibian microbiomes; frog microbiomes were similar but differed from that of the salamander, whose microbiome had the lowest richness and diversity. Understanding how effects of wastewaters on the dissimilarity, richness, and diversity of microbial communities also influence the ecosystem function of communities will be an important next step. However, our study provides novel insight into the characteristics of, and associations among, different wetland microbial communities and effects of wastewaters from energy production.

Montana, North Dakota↗

USGS2021

A small proportion of breeders drive American bullfrog invasion of the Yellowstone River floodplain, Montana

The American bullfrog ( Lithobates catesbeianus ) is a non-native invader of aquatic habitats across the northwestern United States. It recently invaded the Yellowstone River, Montana, and has spread to over 140 km of floodplain habitat. We analyzed seven microsatellites in 528 tadpoles sampled across nearly the entire Yellowstone River invasion (about 140 river km) to characterize invasion genetics, compare our results with those of a recent mtDNA study ( Kamath et al. 2016 ), and to inform control efforts. Microsatellite variation supports the mtDNA-based hypothesis of at least two independent introductions to the floodplain from genetically divergent populations in the midwestern United States, followed by massive range expansion. One introduction is associated with the upstream extent of the invasion near Park City, Montana and the other more broadly with downstream populations. All sites were characterized by small effective numbers of breeders ( N b ; harmonic mean = 9.97), and therefore, a small proportion of highly successful adults may drive the invasion by producing large families. Microsatellites and mtDNA produced discordant estimates of genetic admixture between the upstream and downstream invasions, which may reflect small effective population size. Although we observed isolation by distance using both types of markers, microsatellites appear to reflect population structure resulting from secondary contact between the two introductions, as opposed to structure resulting from equilibrium between gene flow and genetic drift. Most sites showed evidence for genetic bottlenecks, which supports the recent history of invasion. Small N b paired with known high localized extinction rates following colonization suggests focused removal of post metamorphic life stages at sites less likely to go extinct on their own could help limit invasion by bullfrogs.

Montana↗

USGS2013

Lateglacial and Holocene climate, disturbance and permafrost peatland dynamics on the Seward Peninsula, western Alaska

Northern peatlands have accumulated large carbon (C) stocks, acting as a long-term atmospheric C sink since the last deglaciation. How these C-rich ecosystems will respond to future climate change, however, is still poorly understood. Furthermore, many northern peatlands exist in regions underlain by permafrost, adding to the challenge of projecting C balance under changing climate and permafrost dynamics. In this study, we used a paleoecological approach to examine the effect of past climates and local disturbances on vegetation and C accumulation at a peatland complex on the southern Seward Peninsula, Alaska over the past ∼15 ka (1 ka = 1000 cal yr BP). We analyzed two cores about 30 m apart, NL10-1 (from a permafrost peat plateau) and NL10-2 (from an adjacent thermokarst collapse-scar bog), for peat organic matter (OM), C accumulation rates, macrofossil, pollen and grain size analysis. A wet rich fen occurred during the initial stages of peatland development at the thermokarst site (NL10-2). The presence of tree pollen from Picea spp. and Larix laricinia at 13.5–12.1 ka indicates a warm regional climate, corresponding with the well-documented Bølling–Allerød warm period. A cold and dry climate interval at 12.1–11.1 ka is indicated by the disappearance of tree pollen and increase in Poaceae pollen and an increase in woody material, likely representing a local expression of the Younger Dryas (YD) event. Following the YD, the warm Holocene Thermal Maximum (HTM) is characterized by the presence of Populus pollen, while the presence of Sphagnum spp. and increased C accumulation rates suggest high peatland productivity under a warm climate. Toward the end of the HTM and throughout the mid-Holocene a wet climate-induced several major flooding disturbance events at 10 ka, 8.1 ka, 6 ka, 5.4 ka and 4.7 ka, as evidenced by decreases in OM, and increases in coarse sand abundance and aquatic fossils (algae Chara and water fleas Daphnia ). The initial peatland at permafrost site (NL10-1) is characterized by rapid C accumulation (66 g C m −2 yr −1 ), high OM content and a peak in Sphagnum spp. at 5.8–4.6 ka, suggesting the lack of permafrost. A transition to extremely low C accumulation rates of 6.3 g C m −2 yr −1 after 4.5 ka at this site suggests the onset of permafrost aggradation, likely in response to Neoglacial climate cooling as documented across the circum-Arctic region. A similar decrease in C accumulation rates also occurred at non-permafrost site NL10-2. Time-weighted C accumulation rates are 21.8 g C m −2 yr −1 for core NL10-1 during the last ∼6.5 ka and 14.8 g C m −2 yr −1 for core NL10-2 during the last ∼15 ka. Evidence from peat-core analysis and historical aerial photographs shows an abrupt increase in Sphagnum spp. and decrease in area of thermokarst lakes over the last century, suggesting major changes in hydrology and ecosystem structure, likely due to recent climate warming. Our results show that the thermokarst–permafrost complex was much more dynamic with high C accumulation rates under warmer climates in the past, while permafrost was stabilized and C accumulation slowed down following the Neoglacial cooling in the late Holocene. Furthermore, permafrost presence at local scales is controlled by both regional climate and site-specific factors, highlighting the challenge in projecting responses of permafrost peatlands and their C dynamics to future climate change.

Alaska↗

USGS2020

Daily stream samples reveal highly complex pesticide occurrence and potential toxicity to aquatic life

Transient, acutely toxic concentrations of pesticides in streams can go undetected by fixed-interval sampling programs. Here we compare temporal patterns in occurrence of current-use pesticides in daily composite samples to those in weekly composite and weekly discrete samples of surface water from 14 small stream sites. Samples were collected over 10–14 weeks at 7 stream sites in each of the Midwestern and Southeastern United States. Samples were analyzed for over 200 pesticides and degradates by direct aqueous injection liquid chromatography with tandem mass spectrometry. Nearly 2 and 3 times as many unique pesticides were detected in daily samples as in weekly composite and weekly discrete samples, respectively. Based on exceedances of acute-invertebrate benchmarks (AIB) and(or) a Pesticide Toxicity Index (PTI) >1, potential acute-invertebrate toxicity was predicted at 11 of 14 sites from the results for daily composite samples, but was predicted for only 3 sites from weekly composites and for no sites from weekly discrete samples. Insecticides were responsible for most of the potential invertebrate toxicity, occurred transiently, and frequently were missed by the weekly discrete and composite samples. The number of days with benthic-invertebrate PTI ≥0.1 in daily composite samples was inversely related to Ephemeroptera, Plecoptera, and Trichoptera (EPT) richness at the sites. The results of the study indicate that short-term, potentially toxic peaks in pesticides frequently are missed by weekly discrete sampling, and that such peaks may contribute to degradation of invertebrate community condition in small streams. Weekly composite samples underestimated maximum concentrations and potential acute-invertebrate toxicity, but to a lesser degree than weekly discrete samples, and provided a reasonable approximation of the 90th percentile total concentrations of herbicides, insecticides, and fungicides, suggesting that weekly composite sampling may be a compromise between assessment needs and cost.

Science of the Total Environment↗

USGS2021

Influence of redox gradients on nitrate transport from the landscape to groundwater and streams

Increases in nitrogen applications to the land surface since the 1950s have led to a cascade of negative environmental impacts, including degradation of drinking water supplies, nutrient enrichment of aquatic ecosystems and contributions to global climate change. In this study, groundwater, streambed porewater, and stream sampling were used to establish trends in nitrate concentrations and how redox gradients influence nitrate transport across diverse glacial terranes. Decadal sampling has found that elevated nitrate concentrations in shallow groundwater beneath cropland have been sustained for decades. Redox gradients established in the saturated zone using dissolved O 2 , iron, nitrate and excess N 2 from denitrification suggest that nitrate-bearing zones are thin in glacial terranes dominated by fine materials. These thin nitrate-bearing zones lead to suboxic, low nitrate streambed porewater and limit the contributions of nitrate to streams from slow-flow groundwater. In contrast, thick oxic zones in more coarse-grained glacial terranes allow nitrate to reach deeper groundwater, resulting in streambed porewater with elevated nitrate concentrations and causing a large portion of stream nitrate to be derived from slow-flow groundwater. Groundwater age tracer data indicate that denitrification occurs more quickly in the terrane dominated by fine material than in the more coarse-grained terrane. The quicker depletion of nitrate in the more fine-grained terrane suggests that the thinner oxic zone in this terrane is due, in part, to the greater availability and reactivity of electron donors in this terrane than in the more coarse-grained terrane. Groundwater age tracer data and hydrograph separation analysis suggest that saturated zone lag times between when changes in land use practices occur and when changes in stream water are fully observed may vary widely across hydrogeologic settings.

Illinois, Indiana, Iowa, Michigan, Minnesota, Wisc↗

USGS2016

Developing fish trophic interaction indicators of climate change for the Great Lakes

This project addressed regional climate change effects on aquatic food webs in the Great Lakes. We sought insights by examining Lake Erie as a representative system with a high level of anthropogenic impacts, strong nutrient gradients, seasonal hypoxia, and spatial overlap of cold- and cool-water fish guilds. In Lake Erie and in large embayments throughout the Great Lakes basin, this situation is a concern for fishery managers, as climate change may exacerbate hypoxia and reduce habitat volume for some species. We examined fish community composition, fine-scale distribution, prey availability, diets, and biochemical tracers for dominant fishes from study areas with medium-high nutrient levels (mesotrophic, Fairport study area), and low nutrient levels (oligotrophic, Erie study area). This multi-year database (2011-2013) provides the ability to contrast years with wide variation in rainfall, winter ice-cover, and thermal stratification. In addition, multiple indicators of dietary and distributional responses to environmental variability will allow resource managers to select the most informative approach for addressing specific climate change questions. Our results support the incorporation of some relatively simple and cost-efficient approaches into existing agency monitoring programs to track the near-term condition status of fish and fish community composition by functional groupings. Other metrics appear better suited for understanding longer-term changes, and may take more resources to implement on an ongoing basis. Although we hypothesized that dietary overlap and similarity in selected species would be sharply different during thermal stratification and hypoxic episodes, we found little evidence of this. Instead, to our surprise, this study found that fish tended to aggregate at the edges of hypoxia, highlighting potential spatial changes in catch efficiency of the fishery. This work has had several positive impacts on a wide range of resource management and stakeholder activities, most notably in Lake Erie. The results were instrumental in the development of an interim decision rule for dealing with data collected during hypoxic events to improve stock assessment of Yellow Perch. In addition, novel findings from this study regarding spatial and temporal variability in hypoxia have aided US-Environmental Protection Agency in the development of a modified sampling protocol to more accurately quantify the central basin hypoxic zone, and this directly addressed a goal of the Great Lakes Water Quality Agreement of 2012 to reduce the extent and severity of hypoxia. Finally, the study areas developed in this project formed the basis for food web sampling in the 2014 bi-national Coordinated Science and Monitoring Initiative work in Lake Erie.

Report↗

USGS2016

Organic contaminants in Great Lakes tributaries: Prevalence and potential aquatic toxicity

Organic compounds used in agriculture, industry, and households make their way into surface waters through runoff, leaking septic-conveyance systems, regulated and unregulated discharges, and combined sewer overflows, among other sources. Concentrations of these organic waste compounds (OWCs) in some Great Lakes tributaries indicate a high potential for adverse impacts on aquatic organisms. During 2010–13, 709 water samples were collected at 57 tributaries, together representing approximately 41% of the total inflow to the lakes. Samples were collected during runoff and low-flow conditions and analyzed for 69 OWCs, including herbicides, insecticides, polycyclic aromatic hydrocarbons, plasticizers, antioxidants, detergent metabolites, fire retardants, non-prescription human drugs, flavors/fragrances, and dyes. Urban-related land cover characteristics were the most important explanatory variables of concentrations of many OWCs. Compared to samples from nonurban watersheds (< 15% urban land cover) samples from urban watersheds (> 15% urban land cover) had nearly four times the number of detected compounds and four times the total sample concentration, on average. Concentration differences between runoff and low-flow conditions were not observed, but seasonal differences were observed in atrazine, metolachlor, DEET, and HHCB concentrations. Water quality benchmarks for individual OWCs were exceeded at 20 sites, and at 7 sites benchmarks were exceeded by a factor of 10 or more. The compounds with the most frequent water quality benchmark exceedances were the PAHs benzo[ a ]pyrene, pyrene, fluoranthene, and anthracene, the detergent metabolite 4-nonylphenol, and the herbicide atrazine. Computed estradiol equivalency quotients (EEQs) using only nonsteroidal endocrine-active compounds indicated medium to high risk of estrogenic effects (intersex or vitellogenin induction) at 10 sites. EEQs at 3 sites were comparable to values reported in effluent. This multifaceted study is the largest, most comprehensive assessment of the occurrence and potential effects of OWCs in the Great Lakes Basin to date.

Great Lakes↗

USGS2020

Pesticide mixtures show potential toxicity to aquatic life in U.S. streams, water years 2013-2017

During water years (WY) 2013–2017, the U.S. Geological Survey, National Water-Quality Assessment (NAWQA) Project, sampled the National Water Quality Network – Rivers and Streams (NWQN) year-round and reported on 221 pesticides at 72 sites across the United States in agricultural, developed, and mixed land use watersheds. The Pesticide Toxicity Index (PTI) was used to estimate the potential chronic and acute toxicity to three taxonomic groups – fish, cladocerans, and benthic invertebrates. For invertebrates (either cladocerans, benthic invertebrates, or both), the maximum PTI score exceeded the predicted acute toxicity screening level at 18 of the 72 sites (25%) at some point during WY 2013–2017. The predicted toxicity of a single pesticide compound was found to overwhelm the toxicity of other pesticides in the mixtures after concentrations were toxicity weighted. For this study, about 71%, 72%, and 92% of the Fish-, Cladoceran-, and Benthic Invertebrate-PTI scores, respectively, had one pesticide compound primarily contributing to sample potential toxicity (>50%). There were 17 (13 insecticides, 2 herbicides, 1 fungicide, and 1 synergist) of the 221 pesticide compounds analyzed that were the primary drivers of potential toxicity in each water sample in which the PTI and TUmax (toxic unit score for the pesticide that makes the single largest contribution to the PTI) scores were above predicted chronic (>0.1) or acute (>1) toxicity levels for one of the three taxa. For cladocerans and benthic invertebrates, the drivers of predicted chronic (>0.1) and acute (>1) PTIs were mostly insecticides. For cladocerans, the pesticide compounds driving the PTI scores were bifenthrin, carbaryl, chlorpyrifos, diazinon, dichlorvos, dicrotophos, diflubenzuron, flubendiamide, and tebupirimfos. For benthic invertebrates, atrazine (an herbicide), as well as the insecticides – bifenthrin, carbaryl, carbofuran, chlorpyrifos, diazinon, dichlorvos, fipronil, imidacloprid, and methamidophos – were the drivers of predicted toxicity. For fish, there were three pesticide types that contributed the most to predicted chronic (>0.1) PTIs – acetochlor, an herbicide; carbendazim, a fungicide degradate; and piperonylbutoxide, a synergist.

Science of the Total Environment↗

USGS2015

Legacy effects of wildfire on stream thermal regimes and rainbow trout ecology: an integrated analysis of observation and individual-based models

Management of aquatic resources in fire-prone areas requires understanding of fish species’ responses to wildfire and of the intermediate- and long-term consequences of these disturbances. We examined Rainbow Trout populations in 9 headwater streams 10 y after a major wildfire: 3 with no history of severe wildfire in the watershed (unburned), 3 in severely burned watersheds (burned), and 3 in severely burned watersheds subjected to immediate events that scoured the stream channel and eliminated streamside vegetation (burned and reorganized). Results of a previous study of this system suggested the primary lasting effects of this wildfire history on headwater stream habitat were differences in canopy cover and solar radiation, which led to higher summer stream temperatures. Nevertheless, trout were present throughout streams in burned watersheds. Older age classes were least abundant in streams draining watersheds with a burned and reorganized history, and individuals >1 y old were most abundant in streams draining watersheds with an unburned history. Burned history corresponded with fast growth, low lipid content, and early maturity of Rainbow Trout. We used an individual-based model of Rainbow Trout growth and demographic patterns to determine if temperature interactions with bioenergetics and competition among individuals could lead to observed phenotypic and ecological differences among populations in the absence of other plausible mechanisms. Modeling suggested that moderate warming associated with wildfire and channel disturbance history leads to faster individual growth, which exacerbates competition for limited food, leading to decreases in population densities. The inferred mechanisms from this modeling exercise suggest the transferability of ecological patterns to a variety of temperature-warming scenarios.

Idaho↗

USGS2023

A simple approach to modeling light attenuation in the Sacramento-San Joaquin Delta using commonly available data

The diffuse attenuation coefficient of photosynthetically active radiation (KdPAR) is commonly used to predict light attenuation in aquatic productivity models, but obtaining measurements of PAR to compute KdPAR is difficult. In situ calculations of KdPAR require multiple measurements of PAR through the water column, and these measurements are infeasible for real-time recording. Instead, predictive models using surface-water measurements may be used. Traditional KdPAR models are based on open-ocean habitats and rely on chlorophyll—as a proxy measurement for phytoplankton abundance—as the main predictive parameter. However, elevated suspended sediments and dissolved organic materials may also affect KdPAR values of inland water bodies and estuaries. In this study, we leverage KdPAR calculations derived from in situ light measurements collected along with surface-water-quality parameters across the Sacramento-San Joaquin River Delta in California, USA (the Delta). Sampling occurred between January of 2013 and May of 2014. We also explored regional and seasonal effects, but these did not clearly affect the model. Ultimately, the best-performing model included surface-level turbidity only (R2 = 0.91). The simplicity of the model facilitates use of KdPAR estimates for a variety of purposes throughout the Delta, including euphotic depth calculations, and as inputs to primary-productivity and habitat-suitability models. We demonstrate the model’s usability with two open-sources data sets (one spatially dense, and one temporally dense), and estimate KdPAR, euphotic depth, and primary productivity within the Delta. We provide calculations for each estimation, allowing users to easily adopt these models and apply them to their own data or with open-sourced data, which are abundant.

California↗