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Amphibian population declines: 30 Years of progress in confronting a complex problem

In 1989, it dawned on participants at the First World Congress of Herpetology that observed declines in amphibian populations might actually be global in scope and unprecedented in severity. Three decades of research since then has produced an enormous increase in our knowledge of amphibian ecology and appreciation of the complexity of possible causes for amphibian population declines. In September 2019, 30 yr after the First World Congress ended, a day-long, international symposium on amphibian population declines was held at the Redpath Museum of McGill University in Montreal, Canada. Symposium participants drew upon the knowledge gained over three decades of study to look ahead with fresh ideas to address this vital aspect of the global decline of biodiversity. Despite tremendous progress over the past three decades there is still much about amphibian ecology, population biology, and pathology that remains unknown. Amphibian declines have turned out to be more complex than originally expected and the result of multiple possible causes acting across landscapes, among taxa, or between populations in ways that are not at all uniform. The papers in this special issue of Herpetologica , which stem from the symposium, explore much of our current understanding of amphibian declines and their causes.

Herpetologica↗

Effects of hydroperiod duration on survival, developmental rate, and size at metamorphosis in boreal chorus frog tadpoles ( Pseudacris maculata )

Understanding the relationship between climate-driven habitat conditions and survival is key to preserving biodiversity in the face of rapid climate change. Hydroperiod—the length of time water is in a wetland—is a critical limiting habitat variable for amphibians as larvae must metamorphose before ponds dry. Changes in precipitation and temperature patterns are affecting hydroperiod globally, but the impact of these changes on amphibian persistence is poorly understood. We studied the responses of Boreal Chorus Frog ( Pseudacris maculata ) tadpoles to simulated hydroperiods (i.e., water level reductions) in the laboratory using individuals collected from ponds spanning a range of natural hydroperiods (Colorado Front Range, USA). To assess the effects of experimental hydroperiod reduction, we measured mortality, time to metamorphosis, and size at metamorphosis. We found that tadpoles grew at rates reflecting the hydroperiods of their native ponds, regardless of experimental treatment. Tadpoles from permanent ponds metamorphosed faster than those from ephemeral ponds across all experimental treatments, a pattern which may represent a predation selection gradient or countergradient variation in developmental rates. Size at metamorphosis did not vary across experimental treatments. Mortality was low overall but varied with pond of origin. Our results suggest that adaptation to local hydroperiod and/or predation and temperature conditions is important in P. maculata . Moreover, the lack of a plastic response to reduced hydroperiods suggests that P. maculata may not be able to metamorphose quickly enough to escape drying ponds. These results have important implications for amphibian persistence in ponds predicted to dry more quickly due to rapid climate change.

Herpetologica↗

Variation in dietary ecology of two invasive American Bullfrog (Lithobates catesbeianus) populations in Southern California

Invasive American Bullfrogs (Lithobates catesbeianus) are a threat to native species in riparian ecosystems worldwide. They are indiscriminate predators consuming both vertebrate and invertebrate prey, negatively affecting biodiversity. Documenting the diet and feeding ecology of invasive L. catesbeianus can help management agencies identify affected species and facilitate eradication efforts. We present a dietary analysis of two invasive L. catesbeianus populations over multiple breeding seasons (2016–2020), elucidating ontogenetic changes in diet and dietary differences between sexes and habitats. This is the first study to analyze dietary variation from contemporary populations of invasive L. catesbeianus occupying different watersheds in Southern California, an area where their invasion presents acute conservation challenges. Our analysis of 667 gut contents shows that adult females had more prey in their guts than adult males, even though male and female body size was not significantly different. Adults were more likely than juveniles to consume vertebrate prey, and juveniles were more likely than adults to have empty stomachs. We also found that invasive Red Swamp Crayfish (Procambarus clarkii), made up a substantial portion of the diet of adult L. catesbeianus at the site where they were present. These results provide an important ecological context for designing mitigation actions that ameliorate the impacts of invasive L. catesbeianus.

California↗

Using camera traps to estimate site occupancy of invasive Argentine Black and White Tegus (Salvator merianae) in South Florida

The introduction of nonnative species is a leading cause of biodiversity loss. Many invasive species are cryptic or elusive in nature and therefore often evade detection, complicating their management. Occupancy modeling can reveal the presence and spread of invasive species over time and therefore has important management implications. Camera traps can be used to estimate occupancy, or the proportion of sites that are occupied by a target species. During a 4-year study (2016–2020), we used camera traps both with and without lures to detect the presence of invasive Salvator merianae (Argentine Black and White Tegu) at sites in Miami-Dade County, FL. Our results from a multi-season occupancy model revealed that a quadratic effect of ordinal day was the best predictor of detection, with a peak in June, while occupancy was correlated with distance to landscape features that may facilitate tegu movement. We did not detect any large-scale changes in occupancy over the course of our study. We also discovered that the use of lures with camera traps did not impact detection, indicating fewer resources would be required from invasive species managers for effective monitoring. Understanding the factors that impact occupancy and detection probabilities can inform surveillance and removal efforts, leading to more efficient management strategies.

Florida↗

Testing tail-mounted transmitters with Myocastor coypus (nutria)

We developed a tail-mounted radio-transmitter for Myocastor coypus (nutria) that offers a practical and efficient alternative to collar or implant methods. The mean retention time was 96 d (range 57-147 d, n = 7), making this a practical method for short-term studies. The tail-mounts were less injurious to animals than collars and easier for field researchers to implement than either collars or surgically implanted transmitters.

Southeastern Naturalist↗

Behavioral response of the coachwhip (Masticophis flagellum) to habitat fragment size and isolation in an urban landscape

Habitat fragmentation is a significant threat to biodiversity worldwide. Habitat loss and the isolation of habitat fragments disrupt biological communities, accelerate the extinction of populations, and often lead to the alteration of behavioral patterns typical of individuals in large, contiguous natural areas. We used radio-telemetry to study the space-use behavior of the Coachwhip, a larger-bodied, wide-ranging snake species threatened by habitat fragmentation, in fragmented and contiguous areas of coastal southern California. We tracked 24 individuals at three sites over two years. Movement patterns of Coachwhips changed in habitat fragments. As area available to the snakes was reduced, individuals faced increased crowding, had smaller home-range sizes, tolerated greater home-range overlap, and showed more concentrated movement activity and convoluted movement pathways. The behavioral response shown by Coachwhips suggests, on a regional level, area-effects alone cannot explain observed extinctions on habitat fragments but, instead, suggests changes in habitat configuration are more likely to explain the decline of this species. Ultimately, if “edge-exposure” is a common cause of decline, then isolated fragments, appropriately buffered to reduce emigration and edge effects, may support viable populations of fragmentation-sensitive species.

California↗

Temporal connectivity in a prairie pothole complex

A number of studies have noted the occurrence of intermittent surface-water connections between depressional wetlands in general and prairie potholes in particular. Yet, the ecological implications of such connections remain largely unexplored. In 1995, we observed spillage into and out of a North Dakota wetland during two field visits. Between May 3 and May 26, there was a positive relationship between specific conductance and water level at this site, suggesting an external source of dissolved ions. We estimated that specific conductance may have increased at the site by as much as 614 μS cm −1 due to spillage from the upslope wetland. Based on a spatial analysis that compared National Wetlands Inventory maps with 1996 color infrared imagery, we estimated that 28% of the area’s wetlands had a temporary surface water connection to at least one other wetland at that time, including one complex of 14 interconnected wetlands. These results indicate that the connectivity observed in 1995 was not confined to the two wetlands nor to that single year. The degree of connectivity we observed would be expected to occur during the wetter portions of the region’s 20-year wet-dry cycle. We hypothesize that intermittent surface-water connections between wetlands occur throughout the prairie pothole region. Given patterns in relief and precipitation, these connections most likely would have occurred in the eastern portion of the prairie pothole region. However, wetland drainage may have altered historical patterns. The implication of these spatial and temporal trends is that surface-water connections between depressional wetlands should be viewed as a probability event that has some distribution over time and space. We refer to connections that are impermanent, temporally discontinuous, or sporadic as temporal connectivity. The most intriguing feature of these temporary connections may be that they could affect biodiversity or population dynamics through transport of individuals or reproductive bodies. Research is needed to determine whether these connections actually cause these biological effects and to characterize the distribution and effects of this phenomenon.

Wetlands↗

Seed germination of cirsium arvense and Lepidium latifolium: Implications for management of montane wetlands

Cirsium arvense and Lepidium latifolium are species that can aggressively invade wetland margins and potentially reduce biodiversity and alter ecosystem function. Although expansion of these species primarily occurs via rhizomatous growth, seeds are thought to be important in initial establishment. We conducted this study to investigate differences in seed germination of C. arvense and L. latifolium in montane wetlands of Colorado and Wyoming, USA. We used germination chambers to simulate environmental conditions (photoperiod, day/night temperature) during three periods of the growing season at each site and evaluated seed germination in relation to three soil moisture levels and two soil depths. A combination of shallow (<1 cm) seed burial and wet conditions resulted in the greatest germination probability of C. arvense (x = 63.0%), 95% CI = 41.2-80.5%), whereas deep (2-3 cm) seed burial and saturated moisture conditions resulted in almost no germination (x?? = 0.3%, 95% CI = 0.1-1.3%). The maximum germination probability of 44.0% (CI = 28.1-61.4%) for L. latifolium also occurred in the shallow burial and wet treatment; however, only effects of seed burial were significant (P < 0.05). The estimated mean germination probability of deeply buried seeds was <1.0% (CI = 0.3-1.4%) compared to 32% (CI = 19.7-47.9%) for shallowly buried seeds. Our results suggest that each species has the ability to germinate at similar rates throughout the growing season and across a large portion of the moisture gradient. This suggests that management actions, including water-level manipulations, at any time during the growing season may stimulate germination. Although burial of seed to depths of 2-3 cm reduced the germination potential of both species, the use of mechanical implements may be problematic in established stands because new plants of both species easily sprout from root buds. Further, disturbance resulting from such actions diminishes the density and vigor of other plants already present, which may ultimately decrease the competitive resistance of the disturbed environment to invasion by outside species. Detection of new invasions is a critical component of any integrated weed management program. Our results indicate that the incidence of C. arvense and L. latifolium germination is most likely in areas with seeds that are within 1 cm of the soil surface and soil moisture is 75-100% of field capacity for extended periods. ?? 2006, The Society of Wetland Scientists.

Wetlands↗

Floodplain geomorphic processes and environmental impacts of human alteration along coastal plain rivers, USA

Human alterations along stream channels and within catchments have affected fluvial geomorphic processes worldwide. Typically these alterations reduce the ecosystem services that functioning floodplains provide; in this paper we are concerned with the sediment and associated material trapping service. Similarly, these alterations may negatively impact the natural ecology of floodplains through reductions in suitable habitats, biodiversity, and nutrient cycling. Dams, stream channelization, and levee/canal construction are common human alterations along Coastal Plain fluvial systems. We use three case studies to illustrate these alterations and their impacts on floodplain geomorphic and ecological processes. They include: 1) dams along the lower Roanoke River, North Carolina, 2) stream channelization in west Tennessee, and 3) multiple impacts including canal and artificial levee construction in the central Atchafalaya Basin, Louisiana. Human alterations typically shift affected streams away from natural dynamic equilibrium where net sediment deposition is, approximately, in balance with net erosion. Identification and understanding of critical fluvial parameters (e.g., stream gradient, grain-size, and hydrography) and spatial and temporal sediment deposition/erosion process trajectories should facilitate management efforts to retain and/or regain important ecosystem services. ?? 2009, The Society of Wetland Scientists.

Wetlands↗

Woody invasions of urban trails and the changing face of urban forests in the great plains, USA

Corridors such as roads and trails can facilitate invasions by non-native plant species. The open, disturbed habitat associated with corridors provides favorable growing conditions for many non-native plant species. Bike trails are a corridor system common to many urban areas that have not been studied for their potential role in plant invasions. We sampled five linear segments of urban forest along bike trails in Lincoln, Nebraska to assess the invasion of woody non-native species relative to corridors and to assess the composition of these urban forests. The most abundant plant species were generally native species, but five non-native species were also present: white mulberry (Morus alba), common buckthorn (Rhamnus cathartica), tree-of-heaven (Ailanthus altissima), honeysuckle (Lonicera spp.) and elm (Ulmus spp.). The distribution of two of the woody species sampled, common buckthorn and honeysuckle, significantly decreased with increasing distance from a source patch of vegetation (P = 0.031 and 0.030). These linear habitats are being invaded by non-native tree and shrub species, which may change the structure of these urban forest corridors. If non-native woody plant species become abundant in the future, they may homogenize the plant community and reduce native biodiversity in these areas. ?? 2011 American Midland Naturalist.

American Midland Naturalist↗

Urban habitat fragmentation and genetic population structure of bobcats in coastal southern California

Although habitat fragmentation is recognized as a primary threat to biodiversity, the effects of urban development on genetic population structure vary among species and landscapes and are not yet well understood. Here we use non-invasive genetic sampling to compare the effects of fragmentation by major roads and urban development on levels of dispersal, genetic diversity, and relatedness between paired bobcat populations in replicate landscapes in coastal southern California. We hypothesized that bobcat populations in sites surrounded by urbanization would experience reduced functional connectivity relative to less isolated nearby populations. Our results show that, bobcat genetic population structure is affected by roads and development but not always as predicted by the degree that these landscape features surround fragments. Instead, we suggest that urban development may affect functional connectivity between bobcat populations more by limiting the number and genetic diversity of source populations of migrants than by creating impermeable barriers to dispersal.

Orange↗

Grassland bird and butterfly responses to Sericea lespedeza control via late-season grazing pressure

Sericea lespedeza ( Lespedeza cuneata ) is a high-tannin, late-season invasive forb species that reduces biodiversity in tallgrass prairie ecosystems. The largest tallgrass prairie remnant exists in the Flint Hills of Kansas and Oklahoma, where the most common grazing management practice involves prescribed fire in early spring followed by intensive stocking with yearling beef cattle from April to July. Sericea has continued to spread under this management regime. From 2013 to 2016, in Kansas Flint Hills tallgrass prairie, we tested the effects of using spring burning with early-season steer grazing, followed by late-season sheep grazing (Steer+Sheep) compared to spring burning followed by steer grazing only (Steer) on sericea vigor, grassland birds, and pollinators. Density and nest success of Grasshopper Sparrows (Ammodramus savannarum ) and Eastern Meadowlarks ( Sturnella magna ) were not negatively affected by Steer+Sheep relative to Steer treatments, whereas there was evidence of a negative effect in these same metrics for Dickcissels ( Spiza americana ). Abundance of butterflies and their nectar sources were similar between treatments but abundance of grassland specialist butterfly species was low, overall. Comprehensively, Steer+Sheep effectively controls the spread of sericea but may not create habitat for all tallgrass prairie wildlife species.

Kansas, Oklahoma↗

High genetic diversity, low population genetic structure, strong natal philopatry, and longevity revealed in the Black Swift (Cypseloides niger borealis)

Genetic diversity is a critical cornerstone of biodiversity and is a central goal in management and conservation biology. Such diversity has implications for survivability, adaptability, and resiliency of a species. This study aimed to determine levels of genetic diversity and population genetic structure in the Northern Black Swift ( Cypseloides niger borealis ). This species nests across western North America as far north as Canada and south into Mexico, migrating annually to wintering areas in western Brazil. Colonies occur in isolated areas where appropriate nesting habitat is available, and in many cases, colonies are widely separated from each other. Banding data revealed that adults of this long-lived species return to their same breeding colony annually for many years. Additionally, some females exhibit natal philopatry, returning to and successfully raising offspring at the colony where they were hatched. This allowed us to hypothesize that we might expect some amount of genetic structure in the samples we studied. The life history characteristics of this species suggest that breeding colonies might be more genetically differentiated than other migratory birds that tend to have limited population genetic structure across their ranges. We used newly developed species-specific microsatellite primers to examine levels of genetic diversity and connectivity among 6 Black Swift colonies in the western United States. Levels of genetic diversity were generally high (expected heterozygosity ranging from 0.67 to 0.75) and comparable across 3 breeding sites with sufficient sample sizes ( N > 5). Principal coordinates analysis and STRUCTURE analysis showed no real clustering of individuals in regard to colonies, suggesting one panmictic metapopulation rather than multiple populations that are genetically distinct as we had previously hypothesized based on banding data. This is the first study to elucidate the genetic structure among colonies of Black Swift.

Colorado, Idaho, New Mexico↗

Exotic plant species invade hot spots of native plant diversity

Some theories and experimental studies suggest that areas of low plant species richness may be invaded more easily than areas of high plant species richness. We gathered nested-scale vegetation data on plant species richness, foliar cover, and frequency from 200 1-m 2 subplots (20 1000-m 2 modified-Whittaker plots) in the Colorado Rockies (USA), and 160 1-m 2 subplots (16 1000-m 2 plots) in the Central Grasslands in Colorado, Wyoming, South Dakota, and Minnesota (USA) to test the generality of this paradigm. At the 1-m 2 scale, the paradigm was supported in four prairie types in the Central Grasslands, where exotic species richness declined with increasing plant species richness and cover. At the 1-m 2 scale, five forest and meadow vegetation types in the Colorado Rockies contradicted the paradigm; exotic species richness increased with native-plant species richness and foliar cover. At the 1000-m 2 plot scale (among vegetation types), 83% of the variance in exotic species richness in the Central Grasslands was explained by the total percentage of nitrogen in the soil and the cover of native plant species. In the Colorado Rockies, 69% of the variance in exotic species richness in 1000-m 2 plots was explained by the number of native plant species and the total percentage of soil carbon. At landscape and biome scales, exotic species primarily invaded areas of high species richness in the four Central Grasslands sites and in the five Colorado Rockies vegetation types. For the nine vegetation types in both biomes, exotic species cover was positively correlated with mean foliar cover, mean soil percentage N, and the total number of exotic species. These patterns of invasibility depend on spatial scale, biome and vegetation type, spatial autocorrelation effects, availability of resources, and species-specific responses to grazing and other disturbances. We conclude that: (1) sites high in herbaceous foliar cover and soil fertility, and hot spots of plant diversity (and biodiversity), are invasible in many landscapes; and (2) this pattern may be more closely related to the degree resources are available in native plant communities, independent of species richness. Exotic plant invasions in rare habitats and distinctive plant communities pose a significant challenge to land managers and conservation biologists.

Ecological Monographs↗

Response of Everglades tree islands to environmental change

Tree islands are centers of biodiversity within the Florida Everglades, USA, but the factors controlling their distribution, formation, and development are poorly understood. We use pollen assemblages from tree islands throughout the greater Everglades ecosystem to reconstruct the timing of tree island formation, patterns of development, and response to specific climatic and environmental stressors. These data indicate that fixed (teardrop-shaped) and strand tree islands developed well before substantial human alteration of the system, with initial tree island vegetation in place between 3500 and 500 calibrated years before present (cal yr BP), depending on the location in the Everglades wetland. Tree island development appears to have been triggered by regional- to global-scale climatic events at 2800 cal yr BP, 1600–1500 cal yr BP, 1200–1000 cal yr BP (early Medieval Warm Period), and 500–200 cal yr BP (Little Ice Age). These periods correspond to drought intervals documented in Central and South America and periods of southward displacement of the Intertropical Convergence Zone. The records indicate a coherence of climate patterns in both subtropical North America and the Northern Hemisphere Neotropics. Water management practices of the 20th century altered plant communities and size of tree islands throughout the Everglades. Responses range from loss of tree islands due to artificially long hydroperiods and deep water to expansion of tree islands after flow reductions. These data provide evidence for the rapidity of tree island response to specific hydrologic change and facilitate prediction of the response to future changes associated with Everglades restoration plans.

Florida↗

Estimating species richness: The importance of heterogeneity in species detectability

Estimating species richness (i.e., the actual number of species present in a given area) is a basic objective of many field studies carried out in community ecology and is also of crucial concern when dealing with the conservation and management of biodiversity. In most studies, the total number of species recorded in an area at a given time is taken as a measure of species richness. Here we use a capture–recapture approach to species richness estimation with North American Breeding Bird Survey (BBS) data in order to estimate species detectability and thus gain insight about its importance. In particular, competing models making different assumptions about species detectability are available. We carried out analyses on all survey routes of four states, Arizona, Maryland, North Dakota, and Wisconsin, in two years, 1970 and 1990. These states were chosen to provide contrasting habitats, bird species composition, and survey quality. We investigated the effect of state, year, and observer ability on the proportions of different models selected, and on estimates of detectability and species richness. Our results indicate that model M h , which assumes heterogeneous detection probability among species, is frequently appropriate for estimating species richness from BBS data. Species detectability varied among states and was higher for the more skilled observers. These results emphasize the need to take into account potential heterogeneities in detectability among species in studies of factors affecting species richness.

Ecology↗

Determinants of postfire recovery and succession in mediterranean-climate shrublands of California

Evergreen chaparral and semideciduous sage scrub shrublands were studied for five years after fires in order to evaluate hypothesized determinants of postfire recovery and succession. Residual species present in the immediate postfire environment dominated early succession. By the fifth year postfire, roughly half of the species were colonizers not present in the first year, but they comprised only 7–14% cover. Successional changes were evaluated in the context of four hypotheses: (1) event-dependent, (2) fire interval, (3) self-regulatory, and (4) environmental filter hypotheses. Characteristics specific to the fire event, for example, fire severity and annual fluctuations in precipitation, were important determinants of patterns of change in cover and density, supporting the “event-dependent” hypothesis. The “fire interval” hypothesis is also supported, primarily through the impact of short intervals on reproductive failure in obligate seeding shrubs and the impact of long intervals on fuel accumulation and resultant fire severity. Successional changes in woody cover were correlated with decreases in herb cover, indicating support for “self-regulatory” effects. Across this landscape there were strong “environmental filter” effects that resulted in complex patterns of postfire recovery and succession between coastal and interior associations of both vegetation types. Of relevance to fire managers is the finding that postfire recovery patterns are substantially slower in the interior sage scrub formations, and thus require different management strategies than coastal formations. Also, in sage scrub (but not chaparral), prefire stand age is positively correlated with fire severity, and negatively correlated with postfire cover. Differential responses to fire severity suggest that landscapes with combinations of high and low severity may lead to enhanced biodiversity. Predicting postfire management needs is complicated by the fact that vegetation recovery is significantly controlled by patterns of precipitation.

California↗

Species richness and occupancy estimation in communities subject to temporary emigration

Species richness is the most common biodiversity metric, although typically some species remain unobserved. Therefore, estimates of species richness and related quantities should account for imperfect detectability. Community dynamics can often be represented as superposition of species-specific phenologies (e. g., in taxa with well-defined flight [insects], activity [rodents], or vegetation periods [plants]). We develop a model for such predictably open communities wherein species richness is expressed as the sum over observed and unobserved species of estimated species-specific and site-specific occurrence indicators and where seasonal occurrence is modeled as a species-specific function of time. Our model is a multispecies extension of a multistate model with one unobservable state and represents a parsimonious way of dealing with a widespread form of 'temporary emigration.'' For illustration we use Swiss butterfly monitoring data collected under a robust design (RD); species were recorded on 13 transects during two secondary periods within <= 7 primary sampling periods. We compare estimates with those under a variation of the model applied to standard data, where secondary samples are pooled. The latter model yielded unrealistically high estimates of total community size of 274 species. In contrast, estimates were similar under models applied to RD data with constant (122) or seasonally varying (126) detectability for each species, but the former was more parsimonious and therefore used for inference. Per transect, 6 44 (mean 21.1) species were detected. Species richness estimates averaged 29.3; therefore only 71% (range 32-92%) of all species present were ever detected. In any primary period, 0.4-5.6 species present were overlooked. Detectability varied by species and averaged 0.88 per primary sampling period. Our modeling framework is extremely flexible; extensions such as covariates for the occurrence or detectability of individual species are easy. It should be useful for communities with a predictable form of temporary emigration where rigorous estimation of community metrics has proved challenging so far.

Ecology↗