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USGS1989

Geology and water resources of Owens Valley, California

Owens Valley, a long, narrow valley located along the east flank of the Sierra Nevada in east-central California, is the main source of water for the city of Los Angeles. The city diverts most of the surface water in the valley into the Owens River-Los Angeles Aqueduct system, which transports the water more than 200 miles south to areas of distribution and use. Additionally, ground water is pumped or flows from wells to supplement the surface-water diversions to the river-aqueduct system. Pumpage from wells needed to supplement water export has increased since 1970, when a second aqueduct was put into service, and local concerns have been expressed that the increased pumpage may have had a detrimental effect on the environment and the indigenous alkaline scrub and meadow plant communities in the valley. The scrub and meadow communities depend on soil moisture derived from precipitation and the unconfined part of a multilayered aquifer system. This report, which describes the hydrogeology of the aquifer system and the water resources of the valley, is one in a series designed to (1) evaluate the effects that ground-water pumping has on scrub and meadow communities and (2) appraise alternative strategies to mitigate any adverse effects caused by pumping. Two principal topographic features are the surface expression of the geologic framework--the high, prominent mountains on the east and west sides of the valley and the long, narrow intermountain valley floor. The mountains are composed of sedimentary, granitic, and metamorphic rocks, mantled in part by volcanic rocks as well as by glacial, talus, and fluvial deposits. The valley floor is underlain by valley fill that consists of unconsolidated to moderately consolidated alluvial fan, glacial and talus, and fluvial and lacustrine deposits. The valley fill also includes interlayered recent volcanic flows and pyroclastic rocks. The bedrock surface beneath the valley fill is a narrow, steep-sided graben that is structurally separated into the Bishop Basin to the north and the Owens Lake Basin to the south. These two structural basins are separated by (1) a bedrock high that is the upper bedrock block of an east-west normal fault, (2) a horst block of bedrock (the Poverty Hills), and (3) Quaternary basalt flows and cinder cones that intercalate and intrude the sedimentary deposits of the valley fill. The resulting structural separation of the basins allowed separate development of fluvial and lacustrine depositional systems in each basin. Nearly all the ground water in Owens Valley flows through and is stored in the saturated valley fill. The bedrock, which surrounds and underlies the valley fill, is virtually impermeable. Three hydrogeologic units compose the valley-fill aquifer system, a defined subdivision of the ground-water system, and a fourth represents the valley fill below the aquifer system and above the bedrock. The aquifer system is divided into horizontal hydrogeologic units on the basis of either (1) uniform hydrologic characteristics of a specific lithologic layer or (2) distribution of the vertical hydraulic head. Hydrogeologic unit 1 is the upper unit and represents the unconfined part of the system, hydrogeologic unit 2 represents the confining unit (or units), and hydrogeologic unit 3 represents the confined part of the aquifer system. Hydrogeologic unit 4 represents the deep part of the ground-water system and lies below the aquifer system. Hydrogeologic unit 4 transmits or stores much less water than hydrogeologic unit 3 and represents either a moderately consolidated valley fill or a geologic unit in the valley fill defined on the basis of geophysical data. Nearly all the recharge to the aquifer system is from infiltration of runoff from snowmelt and rainfall on the Sierra Nevada. In contrast, little recharge occurs to the system by runoff from the White and Inyo Mountains or from direct precipitation on the valley floor. Ground water flows from the margins of the valley towards the center of the valley; the ground water then flows south to the terminus of the system at Owens (dry) Lake. Ground water flows south from Bishop Basin to Owens Lake Basin through the narrows that constrict the flow opposite Poverty Hills. The aquifer system in the northern half of Owens Lake Basin is divided into east and west halves by the barrier effect caused by the Owens Valley fault. Discharge from the aquifer system is primarily by pumpage and evapotranspiration, and to a lesser extent by flowing wells, springs, underflow, and leakage to the Owens River-Los Angeles aqueduct system. Withdrawals from pumped or flowing wells is the largest component of discharge and accounts for about 50 percent of the outflow from the system. Transpiration by scrub and meadow plant communities, and to a lesser extent by irrigated alfalfa pasture, accounts for about 40 percent of the system's discharge. Natural hydraulic conductivity ranges from less than 400 to about 12,000 feet per day in the basalt flows, the more permeable material in the aquifer system. Where the basalts are fractured by explosives and drilling techniques, actual transmissivities can be greater than 1,000,000 feet squared per day. Hydraulic conductivities in sedimentary deposits of the aquifer system range from less than a few feet per day in lacustrine clays to more than 300 feet per day in gravel stringers and beach deposits in the transition zone between alluvial fan deposits and fluvial and lacustrine deposits. Degree of confinement in the aquifer system generally increases to the south and east in both the Bishop and Owens Lake Basins. The vertical hydraulic gradient across hydrogeologic unit 2 and confining beds in hydrogeologic units 1 and 3 is a function of (1) the asymmetric recharge and hydraulic head created by the dominant recharge from Sierra Nevada runoff and (2) the areal extent and thickness of the confining beds. Although most of the pumpage is from hydrogeologic unit 3, some coincident drawdown has been recorded in nonpumped wells that tap unit 1. Drawdown in hydrogeologic unit 1 is a function of changes in (1) lateral flow through hydrogeologic unit 1, (2) upward flow of ground water through the confining beds, (3) downward leakage of water from hydrogeologic unit 1 to unit 3 through wells, (4) direct withdrawal from well intervals open to hydrogeologic unit 1, and (5) increased evapotranspiration. The water in the aquifer system is generally of excellent quality for public supply and irrigation, with the exception of water stored in thick sequences of lacustrine silts and clays near Owens Lake. The water is principally a calcium bicarbonate type and dissolved-solids concentrations range from approximately 104 to 325 milligrams per liter. Water in the lacustrine sediments of Owens (dry) Lake is a sodium bicarbonate type and dissolved-solids concentrations are about 5,400 milligrams per liter.

California↗

USGS2020

Littoral sediment from rivers: Patterns, rates and processes of river mouth morphodynamics

Rivers provide important sediment inputs to many littoral cells, thereby replenishing sand and gravel of beaches around the world. However, there is limited information about the patterns and processes of littoral-grade sediment transfer from rivers into coastal systems. Here I address these information gaps by examining topographic and bathymetric data of river mouths and constructing sediment budgets to characterize time-dependent patterns of onshore, offshore, and alongshore transport. Two river deltas, which differ in their morphology, were used in this study: the Elwha River, Washington, which builds a mixed sediment Gilbert-style delta, and the Santa Clara River, California, which builds a cross-shore dispersed sand delta from hyperpycnal flows. During and after sediment discharge events, both systems exhibited a similar evolution composed of three phases: (i) submarine delta growth during offshore transport of river sediment, (ii) onshore-dominated transport from the submarine delta to a subaerial river mouth berm, and (iii) longshore-dominated transport away from the river mouth following subaerial berm development. Although stage (ii) occurred within days to weeks for the systems studied and was associated with the greatest rates of net erosion and deposition, onshore transport of sediment from submarine deposit to the beach persisted for years following the river discharge event. These morphodynamics were similar to simple equilibrium profile concepts that were modified with an onshore-dominated cross-shore transport rule. Additionally, both study sites revealed that littoral-grade sediment was initially exported to depths beyond the active littoral cell (i.e., below the depth of closure) during the stage (i). Following several years of reworking by coastal processes, bathymetric surveys suggested that 14 and 46% of the original volume of littoral-grade sediment discharged by the Santa Clara and Elwha Rivers, respectively, continued to be below the depth of closure. Combined, this suggests that integration of river sediment into a littoral cell can be a multi-year process and that the full volume of littoral-grade sediment discharged by small rivers may not be integrated into littoral cells because of sand and gravel “losses” to the continental shelf.

California, Washington↗

USGS1988

Geohydrology of Indian River County, Florida

The surficial aquifer system and the Floridan aquifer system are the sources of groundwater used in Indian River County, Florida. About 65% of the groundwater is used for irrigation and is from the Floridan aquifer system. Saline water ranging from slightly saline to brine underlies the fresh groundwater throughout the county and is the chief water quality problem. Transmissivities of the surficial aquifer system in eastern Indian River County range from 1,500 to 11,000 sq ft/d. Yields of wells are as much as 1,200 gal/min. Reported transmissivities for the Floridan aquifer system range from 65,000 to 200,000 sq ft/d. Most wells that tap the Floridan aquifer system flow; flow rates range from 30 to 2,000 gal/min. Chloride concentrations of water in the surficial aquifer system generally are below 100 mg/L, but concentrations often exceed 250 mg/L in water from the Floridan aquifer system. Between 1976 and 1983, average chloride concentrations in water from six wells that tap the surficial aquifer system in the Vero Beach well field increased about 36 mg/L, but were unchanged in four other wells. The increase in chloride concentration probably is related to a well-field pumpage increase from 5.44 million gal/d in 1976 to 8.00 million gal/d in 1983. In most of the County, chloride concentrations of wells that tap the Floridan aquifer system have not changed significantly in the 15-year period, 1968-83. Water levels in the surficial aquifer system declined 15 to 19 ft between 1971 and 1984 in the Vero Beach well field where the larger groundwater withdrawals occur, but have not declined significantly outside heavily pumped areas. Water levels in the Floridan aquifer system have declined 16 to 24 ft in eastern Indian River County in the 50-year period, 1934-84, but declines outside the heavily pumped areas generally have been less than 10 ft during this period. (USGS)

Water-Resources Investigations Report↗

USGS2000

Drainage-basis-scale geomorphic analysis to determine refernce conditions for ecologic restoration-Kissimmee River, Florida

Major controls on the retention, distribution, and discharge of surface water in the historic (precanal) Kissimmee drainage basin and river were investigated to determine reference conditions for ecosystem restoration. Precanal Kissimmee drainage-basin hydrology was largely controlled by landforms derived from relict, coastal ridge, lagoon, and shallow-shelf features; widespread carbonate solution depressions; and a poorly developed fluvial drainage network. Prior to channelization for flood control, the Kissimmee River was a very low gradient, moderately meandering river that flowed from Lake Kissimmee to Lake Okeechobee through the lower drainage basin. We infer that during normal wet seasons, river discharge rapidly exceeded Lake Okeechobee outflow capacity, and excess surface water backed up into the low-gradient Kissimmee River. This backwater effect induced bankfull and peak discharge early in the flood cycle and transformed the flood plain into a shallow aquatic system with both lacustrine and riverine characteristics. The large volumes of surface water retained in the lakes and wetlands of the upper basin maintained overbank flow conditions for several months after peak discharge. Analysis indicates that most of the geomorphic work on the channel and flood plain occurred during the frequently recurring extended periods of overbank discharge and that discharge volume may have been significant in determining channel dimensions. Comparison of hydrogeomorphic relationships with other river systems identified links between geomorphology and hydrology of the precanal Kissimmee River. However, drainage-basin and hydraulic geometry models derived solely from general populations of river systems may produce spurious reference conditions for restoration design criteria.

Florida↗

USGS2011

Are two systemic fish assemblage sampling programmes on the upper Mississippi River telling us the same thing?

We applied an Index of Biotic Integrity (IBI) used on Wisconsin/Minnesota waters of the upper Mississippi River (UMR) to compare data from two systemic sampling programmes. Ability to use data from multiple sampling programmes could extend spatial and temporal coverage of river assessment and monitoring efforts. We normalized for effort and tested fish community data collected by the Environmental Monitoring and Assessment Program-Great Rivers Ecosystems (EMAP-GRE) 2004–2006 and the Long Term Resource Monitoring Program (LTRMP) 1993–2006. Each programme used daytime electrofishing along main channel borders but with some methodological and design differences. EMAP-GRE, designed for baseline and, eventually, compliance monitoring, used a probabilistic, continuous design. LTRMP, designed primarily for baseline and trend monitoring, used a stratified random design in five discrete study reaches. Analysis of similarity indicated no significant difference between EMAP-GRE and LTRMP IBI scores ( n =238; Global R = 0.052; significance level=0.972). Both datasets distinguished clear differences only between 'Fair' and 'Poor' condition categories, potentially supporting a 'pass–fail' assessment strategy. Thirteen years of LTRMP data demonstrated stable IBI scores through time in four of five reaches sampled. LTRMP and EMAPGRE IBI scores correlated along the UMR's upstream to downstream gradient (df [3, 25]; F =1.61; p =0.22). A decline in IBI scores from upstream to downstream was consistent with UMR fish community studies and a previous, empirically modelled human disturbance gradient. Comparability between EMAP-GRE (best upstream to downstream coverage) and LTRMP data (best coverage over time and across the floodplain) supports a next step of developing and testing a systemic, multi-metric fish index on the UMR that both approaches could inform.

Illinois;Iowa;Minnesota;Missouri;Wisconsin↗

USGS2012

Detection probability of an in-stream passive integrated transponder (PIT) tag detection system for juvenile salmonids in the Klamath River, northern California, 2011

A series of in-stream passive integrated transponder (PIT) detection antennas installed across the Klamath River in August 2010 were tested using tagged fish in the summer of 2011. Six pass-by antennas were constructed and anchored to the bottom of the Klamath River at a site between the Shasta and Scott Rivers. Two of the six antennas malfunctioned during the spring of 2011 and two pass-through antennas were installed near the opposite shoreline prior to system testing. The detection probability of the PIT tag detection system was evaluated using yearling coho salmon implanted with a PIT tag and a radio transmitter and then released into the Klamath River slightly downstream of Iron Gate Dam. Cormack-Jolly-Seber capture-recapture methods were used to estimate the detection probability of the PIT tag detection system based on detections of PIT tags there and detections of radio transmitters at radio-telemetry detection systems downstream. One of the 43 PIT- and radio-tagged fish released was detected by the PIT tag detection system and 23 were detected by the radio-telemetry detection systems. The estimated detection probability of the PIT tag detection system was 0.043 (standard error 0.042). Eight PIT-tagged fish from other studies also were detected. Detections at the PIT tag detection system were at the two pass-through antennas and the pass-by antenna adjacent to them. Above average river discharge likely was a factor in the low detection probability of the PIT tag detection system. High discharges dislodged two power cables leaving 12 meters of the river width unsampled for PIT detections and resulted in water depths greater than the read distance of the antennas, which allowed fish to pass over much of the system with little chance of being detected. Improvements in detection probability may be expected under river discharge conditions where water depth over the antennas is within maximum read distance of the antennas. Improvements also may be expected if additional arrays of antennas are used.

California↗

USGS2003

Initial river test of a monostatic RiverSonde streamflow measurement system

A field experiment was conducted on May 7-8, 2002 using a CODAR RiverSonde UHF radar system at Vernalis, California on the San Joaquin River. The monostatic radar configuration on one bank of the river, with the antennas looking both upriver and downriver, provided very high-quality data. Estimates of both along-river and cross-river surface current were generated using several models, including one based on normal-mode analysis. Along-river surface velocities ranged from about 0.6 m/s at the river banks to about 1.0 m/s near the middle of the river. Average cross-river surface velocities were 0.02 m/s or less.

California↗

USGS2014

Influence of septic systems on stream base flow in the Apalachicola-Chattahoochee-Flint River Basin near Metropolitan Atlanta, Georgia, 2012

Septic systems were identified at 241,733 locations in a 2,539-square-mile (mi 2 ) study area that includes all or parts of 12 counties in the Metropolitan Atlanta, Georgia, area. Septic system percolation may locally be an important component of streamflow in small drainage basins where it augments natural groundwater recharge, especially during extreme low-flow conditions. The amount of groundwater reaching streams depends on how much is intercepted by plants or infiltrates to deeper parts of the groundwater system that flows beyond a basin divide and does not discharge into streams within a basin. The potential maximum percolation from septic systems in the study area is 62 cubic feet per second (ft 3 /s), of which 52 ft 3 /s is in the Chattahoochee River Basin and 10 ft 3 /s is in the Flint River Basin. These maximum percolation rates represent 0.4 to 5.7 percent of daily mean streamflow during the 2011–12 period at the farthest downstream gaging site (station 02338000) on the Chattahoochee River, and 0.5 to 179 percent of daily mean streamflow at the farthest downstream gaging site on the Flint River (02344350). To determine the difference in base flow between basins having different septic system densities, hydrograph separation analysis was completed using daily mean streamflow data at streamgaging stations at Level Creek (site 02334578), with a drainage basin having relatively high septic system density of 101 systems per square mile, and Woodall Creek (site 02336313), with a drainage basin having relatively low septic system density of 18 systems per square mile. Results indicated that base-flow yield during 2011–12 was higher at the Level Creek site, with a median of 0.47 cubic feet per second per square mile ([ft 3 /s]/mi 2 ), compared to a median of 0.16 (ft 3 /s)/mi 2 , at the Woodall Creek site. At the less urbanized Level Creek site, there are 515 septic systems with a daily maximum percolation rate of 0.14 ft 3 /s, accounting for 11 percent of the base flow in September 2012. At the more urban Woodall Creek site, there are 50 septic systems with an average daily maximum percolation rate of 0.0097 ft 3 /s, accounting for 5 percent of base flow in September 2012. Streamflow measurements at 133 small drainage basins (less than 5 mi2 in area) during September 2012 indicated no statistically significant difference in streamflow or specific conductance between basins having high and low density of septic systems (HDS and LDS, respectively). The median base-flow yield was 0.04 (f 3 /s)/mi 2 for HDS sites, ranging from 0 to 0.52 (ft 3 /s)/mi 2 , and 0.10 (ft 3 /s)/mi 2 for LDS sites, ranging from 0 to 0.49 (ft 3 /s)/mi 2 . A Wilcoxon rank-sum test indicated the median base-flow yields for HDS and LDS sites were not statistically different, with a p-value of 0.345. Because of the large size of the study area and associated variations in basin characteristics, data collected in September 2012 were also evaluated on the basis of the basins physical characteristics in an attempt to reduce or eliminate other basin characteristics that might affect base flow. Basins were evaluated based on geologic area, four geographic subareas, and 45-meter (147.6 ft) buffer zone; there were no statistically significant differences between median base-flow yield for HDS and LDS basins. It is probable that detection of the contribution from septic system percolation in base flow at many of the sites visited in September 2012 was obscured by a combination of the limitations of measurement accuracy and evapotranspiration. Detection of septic system percolation may also have been complicated by leaky water and sewer mains, which may have resulted in higher streamflows in LDS basins relative to HDS basins.

Georgia↗

USGS2003

Extent of areal inundation of riverine wetlands along Cypress Creek and the Peace, Alafia, North Prong Alafia, and South Prong Alafia Rivers, west-central Florida

Riverine and palustrine system wetlands are a major ecological component of river basins in west-central Florida. Healthy wetlands are dependent upon the frequency and duration of periodic flooding or inundation. This report assesses the extent, area, depth, frequency, and duration of periodic flooding and the effects of potential surface-water withdrawals on the wetlands along Cypress Creek and the Peace, Alafia, North Prong Alafia, and South Prong Alafia Rivers. Results of the study were derived from step-backwater analysis performed at each of the rivers using the U.S. Army Corps of Engineers Hydrologic Engineering Center-River Analysis System (HEC-RAS) one-dimensional model. The step-backwater analysis was performed using selected daily mean discharges at the 10th, 50th, 70th, 80th, 90th, 98th, 99.5th, and 99.9th percentiles to compute extent of areal inundation, area of inundation, and hydraulic depth to assess the net reduction of areal inundation if 10 percent of the total river flow were diverted for potential withdrawals. The extent of areal inundation is determined by cross-sectional topography and the degree to which the channel is incised. Areal inundation occurs along the broad, low relief of the Cypress Creek floodplain during all selected discharge percentiles. However, areal inundation of the Peace and Alafia Rivers floodplains, which generally have deeply incised channels, occurs at or above discharges at the 80th percentile. The greatest area of inundation along the three rivers generally occurs between the 90th and 98th percentile discharges. The decrease in inundated area resulting from a potential 10-percent withdrawal in discharge ranged as follows: Cypress Creek, 22 to 395 acres (1.7 to 8.4 percent); Peace River, 17 to 1,900 acres (2.1 to 13.6 percent); Alafia River, 1 to 90 acres (1 to 19.6 percent); North Prong Alafia River, 1 to 46 acres (0.7 to 23.4 percent); and South Prong Alafia River, 1 to 75 acres (1.5 to 13.4 percent).

Water-Resources Investigations Report↗

USGS2014

Stream seepage and groundwater levels, Wood River Valley, south-central Idaho, 2012-13

Stream discharge and water levels in wells were measured at multiple sites in the Wood River Valley, south-central Idaho, in August 2012, October 2012, and March 2013, as a component of data collection for a groundwater-flow model of the Wood River Valley aquifer system. This model is a cooperative and collaborative effort between the U.S. Geological Survey and the Idaho Department of Water Resources. Stream-discharge measurements for determination of seepage were made during several days on three occasions: August 27–28, 2012, October 22–24, 2012, and March 27–28, 2013. Discharge measurements were made at 49 sites in August and October, and 51 sites in March, on the Big Wood River, Silver Creek, their tributaries, and nearby canals. The Big Wood River generally gains flow between the Big Wood River near Ketchum streamgage (13135500) and the Big Wood River at Hailey streamgage (13139510), and loses flow between the Hailey streamgage and the Big Wood River at Stanton Crossing near Bellevue streamgage (13140800). Shorter reaches within these segments may differ in the direction or magnitude of seepage or may be indeterminate because of measurement uncertainty. Additional reaches were measured on Silver Creek, the North Fork Big Wood River, Warm Springs Creek, Trail Creek, and the East Fork Big Wood River. Discharge measurements also were made on the Hiawatha, Cove, District 45, Glendale, and Bypass Canals, and smaller tributaries to the Big Wood River and Silver Creek. Water levels in 93 wells completed in the Wood River Valley aquifer system were measured during October 22–24, 2012; these wells are part of a network established by the U.S. Geological Survey in 2006. Maps of the October 2012 water-table altitude in the unconfined aquifer and the potentiometric-surface altitude of the confined aquifer have similar topology to those on maps of October 2006 conditions. Between October 2006 and October 2012, water-table altitude in the unconfined aquifer rose by as much as 1.86 feet in 6 wells and declined by as much as 14.28 feet in 77 wells; average decline was 2.9 feet. A map of changes in the water‑table altitude of the unconfined aquifer shows that the largest declines were in tributary canyons and in an area roughly between Baseline and Glendale Roads. From October 2006 to October 2012, the potentiometric-surface altitude in 10 wells completed in the confined aquifer declined between 0.12 and 20.50 feet; average decline was 6.8 feet. A map of changes in the potentiometric-surface altitude of the confined aquifer shows that the largest declines were in the southwestern part of the Bellevue fan. Reduced precipitation prior to the October 2012 water-level measurements likely is partially responsible for 2006–12 water-table declines in the unconfined aquifer; the relative contribution of precipitation deficit and groundwater withdrawals to the declines is not known. Although the confined aquifer may not receive direct recharge from precipitation or streams, groundwater withdrawal from the confined aquifer induces flow from the unconfined aquifer. Declines in the confined aquifer are likely due to groundwater withdrawals and declines in the water table of the unconfined aquifer. A statistical analysis of five long-term monitoring wells (three completed in the unconfined aquifer, one in the confined aquifer, and one outside the aquifer system boundary) showed statistically significant declining trends in four wells.

Idaho↗

USGS2020

Wind River subbasin restoration: Annual report of US..Geological Survey activities, January 2018 through December 2018

We sampled juvenile wild Steelhead Oncorhynchus mykiss in headwater streams of the Wind River, WA, to characterize populations and investigate life-history metrics, particularly migratory patterns. We used Passive Integrated Transponder (PIT)-tagging and a series of instream PIT-tag interrogation systems (PTISs) to track juveniles. The Wind River subbasin is considered a wild Steelhead refuge by Washington Department of Fish and Wildlife (WDFW). No hatchery Steelhead have been planted in the Wind River subbasin since 1997, and hatchery adults are estimated to be less than one percent of spawners in most years (pers comm. Thomas Buehrens, Washington Department of Fish and Wildlife). Our repeated headwater sampling of consistent sites in the Wind River subbasin has also allowed us to track relative abundance of Brook Trout, a non-native species to the Wind River. Our work is contributing to understanding of Steelhead population response to numerous restoration actions in the subbasin, including removal of Hemlock Dam from Trout Creek in 2009, where our PTISs are helping to quantify adult response. Data from our study, and companion work by Washington Department of Fish and Wildlife, are contributing to Bonneville Power Administration’s (BPA) Research Monitoring and Evaluation (RM&E) Program Strategy of Fish Population Status Monitoring (www.cbfish.org/ProgramStrategy.mvc/ViewProgramStrategySummary/1). Specifically this work addresses the sub-strategies of: 1) Assessing the Status and Trends of Diversity of Natural Origin Fish Populations and to Uncertainties Research regarding differing life histories of a wild Steelhead population, 2) Assessing the Status and Trend of Adult Natural Origin Fish Populations, and 3) Monitoring and Evaluating the Effectiveness of Tributary Habitat Actions Relative to Environmental, Physical, or Biological Performance Objectives. Our headwaters parr PIT tagging, WDFW parr, smolt, and adult tagging and our instream PTISs are providing data on movements and life histories of parr, smolt, and adult Steelhead. During summer 2018, we PIT-tagged 1,592 age-0 and age-1 Steelhead parr in headwater areas of the Wind River subbasin to characterize population traits and investigate life-history diversity, including growth and pre-smolt downstream movement. Repeat headwater sampling and smolt trap operations provide opportunities for recapture, and instream PTISs and Columbia River infrastructure provide opportunity for detection of PIT-tagged fish. Throughout the year, we maintained a series of six instream PTISs to monitor movement of tagged Steelhead parr, smolts, and adults. Detections at the instream PTISs have demonstrated trends of age-0 and age-1 parr emigration from natal areas during summer and fall, in addition to the expected movement of parr and smolts in spring. Substantial numbers of parr make downstream movements as age-1 fish. We have estimated that from 15 to 33 percent of parr tagged as age-0 fish make downstream migrations at age-1 for additional rearing. We have estimated that from 1 to 27 percent of parr tagged as age-1 fish make downstream migrations during fall. These findings raise many questions about parr rearing strategies, habitat use, and success of these migrants and suggest a need for broader monitoring of juvenile Steelhead in some river systems to fully document juvenile production. Long-term monitoring of PIT-tagged fish is providing information on contribution of various life-history strategies to smolt production and adult returns. Movements of PIT-tagged adult Steelhead were recorded at instream PTISs. These data have allowed assessment of adult returns to tributary watersheds within the Wind River subbasin. Detection efficiency of adult PIT-tagged Steelhead at our primary adult-monitoring PTIS in Trout Creek has been greater than 92 percent during 6 of the past 7 years. This is providing excellent data to estimate adult returns to this watershed. Determination of adult use of tributary watersheds is providing data to help evaluate the efficacy of the removal of Hemlock Dam on Trout Creek. Hemlock Dam, located at rkm 2.0 of Trout Creek, was removed in summer 2009. The dam contributed to hydrologic impairment of Trout Creek and had potential negative effects on Steelhead. The improvements made to the upper Wind River PTIS (site code WRU at rkm 28.3; better site characteristics and grid power) during 2016 and 2017, and a planned new site in the Mine Reach of the upper Wind River, will allow estimates of subbasin adult escapement like those in Trout Creek. During 2018, we also completed planning and permitting with U.S. Forest Service for a new PTIS site at rkm 36 of the Wind River (the Mine Reach, mentioned above). This site will replace two sites (one in Paradise Creek and one at rkm 41 of the Wind River), which had operational challenges due to lack of adequate solar power and winter difficulties. The new Mine Reach PTIS site at rkm 36, will have better solar exposure, fewer winter operations difficulties, and provide opportunity to detect fish from juvenile sampling sites that were downstream of the previous two PTISs. The more consistent operation of the new Mine Reach PTIS site will increase our ability to estimate migrant abundance as all the juveniles tagged upstream of it will be subject to the same potential detection history, instead of three different potential detection histories as before. Additionally, with the new Mine Reach PTIS site lower in the watershed, it will subject more PIT-tagged adult Steelhead to detection and provide ability to generate a nonbiased adult-detection efficiency estimate for the WRU PTIS at rkm 28.3 of the Wind River. This will provide the opportunity to estimate yearly adult Steelhead abundance to the upper Wind watershed area. Permitting is complete and some supplies have been purchased to build and install this new site in 2019. Repeat sampling at consistent locations in the subbasin has allowed investigation into juvenile Steelhead growth patterns. Growth rates (relative change in weight) of age-0 PIT-tagged parr during summer are similar across the subbasin, but lower for age-1 parr in the Trout Creek watershed than the upper Wind River watershed. Yearly growth for parr tagged at age-0 is similar across the subbasin. Yearly growth for parr tagged at age-1 is lowest in Martha Creek, but similar elsewhere. Non-native Brook Trout are present in portions of the subbasin, chiefly the Trout Creek watershed, and repeat sampling has allowed us to index their prevalence. Percentage of catch that is Brook Trout at each of four sample sites in Trout Creek have declined from the period 1998 – 2003 to the period 2011 – 2018. There was a pattern of decline in percent of catch and number of Brook Trout at the Trout Creek sites from 2011 through 2016, though a slight upward trend during 2017 and 2018 has been evident. Evaluating and planning restoration efforts are of interest to many managers and agencies to ensure efficient use of resources. The evaluation of various life-histories of Steelhead within the Wind River subbasin will provide information to better track populations, and to direct habitat restoration and water allocation planning. Movement of Steelhead parr raises many questions regarding estimating juvenile abundance, origin, and habitat use within watersheds. Improved PTISs and focused PIT tagging of age-0 and age-1 Steelhead parr are increasingly allowing us to investigate such questions. Increasingly detailed Viable Salmonid Population information, such as that provided by PIT-tagging and instream PTISs networks like those in the Wind River subbasin, provide data to inform policy and management, as life-history strategies and production bottlenecks are identified and understood.

Washington↗

USGS2023

Broadscale distribution, abundance and habitat associations of the invasive Asian clam (Corbicula fluminea) in the lower Columbia River, USA

The Asian clam, Corbicula fluminea , is an invasive freshwater bivalve that has established populations across the globe and is known to have deleterious effects on natural and human systems. Yet, despite being present in the Columbia River (CR) for nearly a century, little is known about this invader's basic biology and ecology in this large river system. Thus, we undertook a field study to assess its i) broadscale distribution and abundance, and ii) associations with habitat characteristics in the lower CR. During 2019-20, C. fluminea were collected from 27 shore-based stations spanning 481 river kilometers of the lower CR, along with several habitat characteristics (bank slope, temperature, dissolved oxygen, pH, salinity, conductivity, chlorophyll- a concentration, and sediment composition and % organic matter). C. fluminea abundance ranged from 0-430 ind. m -2 . Most sites with abundances >100 ind. m -2 were located downstream of Bonneville Dam, while most sites with abundances < 100 ind. m -2 were located upstream. Generalized linear models predicting the abundance of C. fluminea indicated significantly positive correlations with water temperature and % sand, and negative correlations with bank slope and sedimentary % organic matter. We also reviewed the global literature on abundance and habitat associations of C. fluminea and compared this with our own results. Our investigation represents the greatest spatial extent at which C. fluminea has been studied in the CR and our results provide a better understanding of the basic biology and ecology of this global invader, as well as provide natural resource managers with information on habitat conditions favorable for this invasive bivalve within temperate river ecosystems.

Oregon, Washington↗

USGS2006

Flood-tracking chart for the Chattahoochee River Basin in Metropolitan Atlanta, Georgia

The U.S. Geological Survey (USGS)—in cooperation with other Federal, State, and local agencies—operates a flood monitoring system in the Chattahoochee River Basin. This system is a network of 35 automated river stage stations that transmit stage data through satellite telemetry to the USGS Georgia Water Science Center in Atlanta. During floods, the public and emergency response agencies use this information to make decisions about road closures, evacuations, and other public safety issues. The emergency phone number for your area is listed under “Local flood emergency phone numbers.”

Georgia↗

USGS2000

Morphology and acoustic character of the Antarctic Wilkes Land turbidite systems: Ice-sheet-sourced versus river-sourced fans

The Wilkes Land continental slope contains an intricate network of submarine canyons that on the continental rise develop into a series of channel and overbank deposits of turbidite systems. We can define upper-fan, middle-fan, and lower-fan provinces. The Wilkes Land upper fans are characterized by large channels with relief up to 900 m, distances between levee crests up to 18 km, and channel-floor widths up to 6 km. Middle-fan channels also have high relief (∼300 m), and locally, interchannel areas exhibit mounded contourite-style deposits with high relief (up to 490 m). Within middle-fan sediment mounds there are acoustic facies of channel-overbank deposits from turbidity currents, and of sediment waves from contour-current sedimentation. The lower rise is characterized by small, shallow channels (50-75 m relief) and by interchannel areas of low relief, both characteristic of a lower-fan environment. The Wilkes Land turbidite systems show the following significant morphological differences compared to most river-sourced fans: (1) multiple large tributary channels across the upper and middle fan, (2) channel relief several times greater (900 m) than typical relief (100-200 m) for channels on fans less than 300 km in diameter, and (3) steep middle-fan and lower-fan gradients. We interpret the differences in channel network patterns, channel size, and middle-fan and lower-fan gradients between the Wilkes Land fans and other fans to result from the continental ice sheet feeding glacial ice streams that reached the outer continental shelf at times of glacial maxima. The Wilkes Land canyon-channel network patterns are comparable with the high-latitude Laurentian Fan and Labrador Sea channels. The Laurentian Fan also has large upper-fan channels with larger relief (800 m) than typical relief (200-300 m) expected for fans that are 600 km in diameter. Both the Labrador Sea and Laurentian Fan are fed by continental ice sheets at the shelf edge.

Journal of Sedimentary Research↗

USGS2014

Raft and floating radio frequency identification (RFID) antenna systems for detecting and estimating abundance of PIT-tagged fish in rivers

Portable radio frequency identification (RFID) PIT tag antenna systems are increasingly being used in studies examining aquatic animal movement, survival, and habitat use, and their design flexibility permits application in a wide variety of settings. We describe the construction, use, and performance of two portable floating RFID PIT tag antenna systems designed to detect fish that were unavailable for recapture using stationary antennas or electrofishing. A raft antenna system was designed to detect and locate PIT-tagged fish in relatively long (i.e., ≥10 km) river reaches, and consisted of two antennas: (1) a horizontal antenna (4 × 1.2 m) installed on the bottom of the raft and used to detect fish in shallower river reaches (<1 m), and (2) a vertical antenna (2.7 × 1.2 m) for detecting fish in deeper pools (≥1 m). Detection distances of the horizontal antenna were between 0.7 and 1.0 m, and detection probability was 0.32 ± 0.02 (mean ± SE) in a field test using rocks marked with 32-mm PIT tags. Detection probability of PIT-tagged fish in the Cache la Poudre River, Colorado, using the raft antenna system, which covered 21% of the wetted area, was 0.14 ± 0.14. A shore-deployed floating antenna (14.6 × 0.6 m), which covered 100% of the wetted area, was designed for use by two operators for detecting and locating PIT-tagged fish in shorter (i.e., <2 km) river reaches. Detection distances of the shore-deployed floating antenna were between 0.7 and 0.8 m, and detection probabilities during field deployment in the St. Vrain River exceeded 0.52. The shore-deployed floating antenna was also used to estimate abundance of PIT-tagged fish. Results suggest that the shore-deployed floating antenna could be used as an alternative to estimating abundance using traditional sampling methods such as electrofishing.

Colorado↗

USGS2005

Quantifying production of salmon fry in an unscreened irrigation system: A case study on the Rangitata River, New Zealand

Diversion of out-migrant juvenile salmon into unscreened irrigation and hydroelectric canals is thought to have contributed significantly to declining populations of anadromous salmonids in the Pacific Northwest but is seldom studied in detail. Here we describe a program to study the fate of Chinook salmon Oncorhynchus tshawytscha fry diverted into the unscreened Rangitata Diversion Race (RDR) on the Rangitata River, New Zealand, by trapping fish in a random sample of on-farm canals in irrigation schemes (systems) served by the RDR. The catch rate at a site 9 km below the intake was strongly related to Rangitata River flow, but catches further downstream were unrelated to flow. Most fish entering the RDR were fry or early postfry (<70 mm fork length (FL)), but up to 92% of the fish trapped in on-farm canals were fingerlings (>70 mm FL), suggesting that many such fish became resident in the RDR for up to 3 months. Consequently, our estimate of the total number of fish leaving the RDR via on-farm canals (204,200 fish; 95% confidence limits = 127,100 and 326,700) is a conservative measure of the number lost from the Rangitata River because it does not allow for mortality within the RDR. We did not quantify the proportion of Rangitata River out-migrants that entered the RDR, but our results suggest that this figure was at least 5% and that it may have been as high as 25%, depending on mortality rates within the Rangitata River main stem and the RDR itself.

Rangitata River↗

USGS2011

Geophysical logs and water-quality data collected for boreholes Kimama-1A and -1B, and a Kimama water supply well near Kimama, southern Idaho

In September 2010, a research consortium led by scientists from Utah State University began drilling the first of three continuously cored boreholes on the Snake River Plain in southern Idaho. The goals of this effort, the Snake River Scientific Drilling Project, are to study the interaction between the Earth's crust and mantle, to identify potential geothermal energy sources, and to track the evolution of the Yellowstone hotspot on the Snake River Plain. The first borehole, located near Kimama, Idaho, is about 50 miles southwest of the U.S. Department of Energy's Idaho National Laboratory. Because geohydrologic data are scarce for that area of the central Snake River Plain, the Kimama borehole, completed in January 2011, provided a unique opportunity to collect geophysical and water-chemistry data from the eastern Snake River Plain aquifer system, downgradient of the laboratory. Therefore, in conjunction with the Snake River Scientific Drilling Project, scientists from the U.S. Geological Survey's Idaho National Laboratory Project Office conducted geophysical logging and collected water samples at the Kimama site. Wireline geophysical logs were collected for the diverging borehole, Kimama-1A and -1B, from land surface to 976 and 2,498 feet below land surface (BLS), respectively. Water samples were collected from Kimama-1A at depths near 460 and 830 feet BLS, and from the Kimama Water Supply (KWS) well located about 75 feet away. Geophysical log data included a composite of natural gamma, neutron, gamma-gamma dual density, and gyroscopic analysis for boreholes Kimama-1A and -1B. Geophysical logs depicted eight sediment layers (excluding surficial sediment) ranging from 4 to 60 feet in thickness. About 155 individual basalt flows were identified, ranging from less than 3 feet to more than 175 feet in thickness (averaging 15 feet) for borehole Kimama-1B (0 to 2,498 feet BLS). Sediment and basalt contacts were selected based on geophysical traces and were confirmed with visual inspection of core photographs. Temperature logs from the water table surface (about 260 feet BLS) to the bottom of borehole Kimama-1B (2,498 feet BLS) were nearly isothermal, ranging from about 62 to 64 degrees Fahrenheit. Gyroscopic data revealed that borehole Kimama-1B begins to separate from borehole Kimama-1A near a depth of 676 feet BLS. Drillhole azimuth and horizontal deviation at total logged depth for boreholes Kimama-1A and -1B were 172.6 and 188.3 degrees and 25.9 and 82.0 feet, respectively. Water samples were collected and analyzed for common ions; selected trace elements; nutrients; isotopes of hydrogen, oxygen, and carbon; and selected radionuclides. One set of water samples was collected from the KWS well and the two other sample sets were collected from borehole Kimama-1A near 460 and 830 feet BLS. With one exception, data for all three zones sampled near Kimama generally indicated that the water chemistry was similar. The exception was found in the deepest zone in borehole Kimama-1A (830 feet BLS) where concentrations probably were affected by the drilling mud. A comparison of the inorganic, organic, and stable chemistry data between the KWS well and the 460-foot zone in borehole Kimama-1A indicated similar chemistry of the aquifer water, except for some variability with nitrate plus nitrite, orthophosphate, iron, zinc, and carbon-14. Radionuclide concentrations were either less than reporting levels or at background levels for the eastern Snake River Plain aquifer.

Idaho↗

USGS2013

Monitoring of stage and velocity, for computation of discharge in the Summit Conduit near Summit, Illinois, 2010-2012

Lake Michigan diversion accounting is the process used by the U. S. Army Corps of Engineers to quantify the amount of water that is diverted from the Lake Michigan watershed into the Illinois and Mississippi River Basins. A network of streamgages within the Chicago area waterway system monitor tributary river flows and the major river flow on the Chicago Sanitary and Ship Canal near Lemont as one of the instrumental tools used for Lake Michigan diversion accounting. The mean annual discharges recorded by these streamgages are used as additions or deductions to the mean annual discharge recorded by the main stream gaging station currently used in the Lake Michigan diversion accounting process, which is the Chicago Sanitary and Ship Canal near Lemont, Illinois (station number 05536890). A new stream gaging station, Summit Conduit near Summit, Illinois (station number 414757087490401), was installed on September 23, 2010, for the purpose of monitoring stage, velocity, and discharge through the Summit Conduit for the U.S. Army Corps of Engineers in accordance with Lake Michigan diversion accounting. Summit Conduit conveys flow from a small part of the lower Des Plaines River watershed underneath the Des Plaines River directly into the Chicago Sanitary and Ship Canal. Because the Summit Conduit discharges into the Chicago Sanitary and Ship Canal upstream from the stream gaging station at Lemont, Illinois, but does not contain flow diverted from the Lake Michigan watershed, it is considered a flow deduction to the discharge measured by the Lemont stream gaging station in the Lake Michigan diversion accounting process. This report offers a technical summary of the techniques and methods used for the collection and computation of the stage, velocity, and discharge data at the Summit Conduit near Summit, Illinois stream gaging station for the 2011 and 2012 Water Years. The stream gaging station Summit Conduit near Summit, Illinois (station number 414757087490401) is an example of a nonstandard stream gage. Traditional methods of equating stage to discharge historically were not effective. Examples of the nonstandard conditions include the converging tributary flows directly upstream of the gage; the trash rack and walkway near the opening of the conduit introducing turbulence and occasionally entraining air bubbles into the flow; debris within the conduit creating conditions of variable backwater and the constant influx of smaller debris that escapes the trash rack and catches or settles in the conduit and on the equipment. An acoustic Doppler velocity meter was installed to measure stage and velocity to compute discharge. The stage is used to calculate area based the stage-area rating. The index-velocity from the acoustic Doppler velocity meter is applied to the velocity-velocity rating and the product of the two rated values is a rated discharge by the index-velocity method. Nonstandard site conditions prevalent at the Summit Conduit stream gaging station generally are overcome through the index-velocity method. Despite the difficulties in gaging and measurements, improvements continue to be made in data collection, transmission, and measurements. Efforts to improve the site and to improve the ratings continue to improve the quality and quantity of the data available for Lake Michigan diversion accounting.

Illinois↗