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The international phosphate resource data base; development and maintenance

The IPRDB (International Phosphate Resource Data Base) was developed to provide a single computerized source of geologic information about phosphate deposits worldwide. It is expected that this data base will encourage more thorough scientific analyses of phosphate deposits and assessments of undiscovered phosphate resources, and that methods of data collection and storage will be streamlined. Because the database was intended to serve as a repository for diverse and detailed data, a large amount of the early research effort was devoted to the design and development of the system. To date (1982), the file remains incomplete. All development work and file maintenance work on IPRDB was suspended as of October 1, 1982; this paper is intended to document the steps taken up to that date. The computer programs listed in the appendices were written specifically for the IPRDB phosbib file and are of limited future use.

Open-File Report↗

Continental drilling for paleoclimatic records: Recommendations from an international workshop

The Workshop, entitled "Continental Drilling for Paleoclimate Records", was sponsored by the Past Global Changes (PAGES) Project, a core project of the International Geosphere-Biosphere Programme (IGBP) and by the GeoForschungsZentrum, Potsdam, Germany, in conjunction with the International Continental Drilling Programme (ICDP). The impetus for the meeting was the need for long continental paleoclimate records that will fill gaps left by the marine and ice-core records and provide information on time and spatial scales that are relevant to human activities. Further impetus came from a perceived need to balance the forecasts and reconstructions of climate models with information on actual behavior of the climate system on the continents. The meeting was organized by Steven M. Colman, Suzanne A.G. Leroy, and Jörg F.W. Negendank and was held at the GeoForschungsZentrum, Potsdam, Germany, June 30-July 2, 1995. Because the Workshop was primarily a working meeting, a relatively small number of participants were invited (Appendix 3). Leaders of the PAGES Pole-Equator-Pole (PEP) transects and existing large-lake drilling programs, along with a mixture of technical experts, were the primary group of attendees.

Report↗

The World Coal Quality Inventory: South America

Executive Summary-Introduction: The concepts of a global environment and economy are strongly and irrevocably linked to global energy issues. Worldwide coal production and international coal trade are projected to increase during the next several decades in an international energy mix that is still strongly dependent on fossil fuels. Therefore, worldwide coal use will play an increasingly visible role in global environmental, economic, and energy forums. Policy makers require information on coal, including coal quality data, to make informed decisions regarding domestic coal resource allocation, import needs and export opportunities, foreign policy objectives, technology transfer policies, foreign investment prospects, environmental and health assessments, and byproduct use and disposal issues. The development of a worldwide, reliable, coal quality database would help ensure the most economically and environmentally efficient global use of coal. The U.S. Geological Survey (USGS), in cooperation with many agencies and scientists from the world's coal producing countries, originally undertook a project to obtain representative samples of coal from most of the world's producing coal provinces during a limited period of time (roughly 1998-2005), which is called the World Coal Quality Inventory (WoCQI). The multitude of producing coal mines, coal occurrences, or limited accessibility to sites in some countries can preclude collecting more than a single sample from a mine. In some areas, a single sample may represent an entire coal mining region or basin. Despite these limitations in sampling and uneven distribution of sample collection, the analytical results can still provide a general overview of world coal quality. The USGS intends to present the WoCQI data in reports and, when possible, in Geographic Information System (GIS) products that cover important coal bearing and producing regions.

Open-File Report↗

Lunar periodicity in the shell flux of planktonic foraminifera in the Gulf of Mexico

Synchronised reproduction offers clear benefits to planktonic foraminifera – an important group of marine calcifiers – as it increases the chances of successful gamete fusion. Such synchrony requires tuning to an internal or external clock. Evidence exists for lunar reproductive cycles in some species, but its recognition in shell flux time series has proven difficult, raising questions about reproductive strategies. Using spectral analysis of a 4-year time series (mostly at weekly resolution) from the northern Gulf of Mexico, we show that the shell flux of Globorotalia menardii , Globigerinella siphonifera , Orbulina universa , Globigerinoides sacculifer , Globigerinoides ruber (both pink and white varieties), Pulleniatina obliquiloculata , Neogloboquadrina dutertrei , Globigerinella calida and Globigerinita glutinata is characterised by lunar periodicity. However, the lunar rhythm is not present in all size fractions of each species and tends to be more dominant in the flux of larger shells, consistent with reproduction being more prevalent in larger specimens. Lunar periodicity is superimposed on longer term/seasonal changes in the shell fluxes, but accounts for a significant part of the variance in the fluxes. The amplitude of the lunar cycle increases roughly proportional with the magnitude of the flux, demonstrating that most of the population is indeed affected by lunar-phased synchronisation. In most species peak fluxes occur predominantly around, or just after, full moon. Only G. siphonifera and G. calida show a contrasting pattern with peaks concentrated around new moon. Although the exact cause of the synchronisation remains elusive, our data considerably increase the number of species for which lunar synchronised reproduction is reported and suggest that such reproductive behaviour is common in many species of planktonic foraminifera.

Biogeosciences↗

Results from the Department of the Interior Strategic Sciences Group Technical Support for the 2018 Kīlauea Eruption

On May 3, 2018 Hawai'i’s Kīlauea volcano erupted, ultimately covering 35 square kilometers (13.5 square miles) of land in lava, destroying over 700 homes in multiple subdivisions, and displacing over 2500 residents in the Puna District on the southeast flank of the volcano. Simultaneously, Kīlauea’s summit experienced its largest collapse in 200 years, with a total of 500 meters (1,640 feet) subsidence and tens of earthquakes each day rattling surrounding communities. These simultaneous events impacted residential, agricultural, business, tourist, and scientific areas. Hawai'i Volcanoes National Park closed, slowing tourism and the local economy. The building housing the United States Geological Survey (USGS) Hawai'ian Volcano Observatory also closed, displacing scientists responsible for monitoring the erupting volcano. The eruption lasted 107 days, one of the longest eruptions in recent history in lower Puna. Throughout the eruption, uncertainty regarding the duration of the event, its extent, and total damage remained high. This uncertainty led to social tensions and fatigue across the affected community, responders, and local officials. At the direction of the USGS Director, serving as the Science Advisor to the Secretary of the of the Interior, the Department of the Interior (DOI, hereafter also referred to as “the Department”) Strategic Sciences Group (SSG) convened a multidisciplinary group of 13 experts in Hilo, Hawai'i, on July 17-19, 2018. The SSG was charged with considering the cascading short- and long-term social, economic, and environmental consequences of the 2018 Kīlauea eruption to DOI resources, employees, and facilities as well as to the surrounding communities. Established in 2012, the SSG is designed to complement ongoing response efforts by providing strategic science to identify potential social, environmental, and economic consequences and potential interventions during a crisis event affecting Departmental resources. This activation of the SSG was funded by the USGS. It was the first official activation of the SSG since it supported Hurricane Sandy recovery in 2013 and provided the unique opportunity to test new methods, including bolstering the social science expertise on the team and interacting directly with stakeholders before, during, and after deployment. The SSG Kīlauea Team developed three scenarios focused on 1) the impacts of continued seismicity and deformation at the summit; 2) vog (volcanic smog); and 3) the eruption in the lower East Rift Zone. Across all scenarios, areas of concern included human health (physical and mental); biosecurity (for example, protecting threatened and endangered species); infrastructure (impacts caused by seismic activity, vog, and lava); communications (internal and public-facing); long-term planning (related to tourism, access, housing); and ongoing needs for community engagement and empowerment. The SSG Kīlauea Team identified 59 potential actions for mitigation. Highlights of these actions were delivered to stakeholders during briefings in August and September 2018. Examples of potential actions included: ● Seize opportunities to develop new partnerships within and outside of DOI to address facilities issues caused by seismic damage and park closure. ● Educate community members and new workers to increase early detection of invasive species and establish new wash stations to address biosecurity threats to the park posed by more frequent commuting from new temporary Hilo locations. ● Create a "vog officer" position to ensure coordination and consistency in communication about vog hazards across federal, state, and county agencies. It is important to note that the potential actions are suggestions and are not intended to be prescriptive. The SSG uses “blue sky thinking” when developing these potential actions to encourage creative approaches to problem solving. In some cases, some of the suggested potential actions derived by the SSG are actions that were already underway, or already under consideration and helped to affirm 3 activities by different stakeholders. In other cases, the actions may be new ideas. Some were applicable to immediate response, while others are more relevant to long-term recovery. This report details the results from the July 2018 activation of the SSG. It includes background on Kīlauea and the 2018 eruption, an overview of SSG methodology, and a complete list of the potential actions to mitigate cascading consequences identified by the SSG. Importantly, Appendix 4 includes several rapidly assembled “issue papers” on a variety of topics for consideration for recovery and future preparedness and response activities. This report is designed to be used by both the Department and more broadly by partners, including the Federal Emergency Management Agency, Hawai'i County, Hawai'i Department of Health, and the Hawai'i Emergency Management Agency.

Hawaii↗

U.S. Geological Survey Program on the South Florida Ecosystem; proceedings of South Florida Restoration Science Forum, May 17-19, 1999, Boca Raton, Florida

The purpose of the forum is to highlight the powerful connection between science and management decisions in restoration efforts. The public's investment in science is paying off in support of better management decisions and restoration of imperiled south Florida Ecosystems, including the internationally recognized, globally significant Everglades. The forum affords a unique opportunity for elected officials and other policy- and decision makers, along with the general public, to see--under one roof--highlights of the most significant restoration science and management efforts underway. The forum promotes the link between science and management. Scientists and decisionmakers will come together to discuss the needs of each in order to ensure that plans for restoration are based in science and are the most cost effective and highest quality possible. Continued vigilance over south Florida ecosystems is essential to prevent further harm and to restore them. Representatives from numerous federal, state, local, and nongovernmental entities are organizing the forum for the Science Coordination Team of the South Florida Ecosystem Working Group. The U.S. Geological Survey and the South Florida Water Management District are the primary hosts of the forum.

Florida↗

Writing refuge management goals and objectives: a handbook

Goals and objectives are the unifying elements of successful refuge management. They identify and focus management priorities, provide a context for resolving issues, guide specific projects, provide rationale for decisions, and offer a defensible link among management actions, refuge purpose(s), Service policy, and the National Wildlife Refuge System (Refuge System) mission. Pursuant to Refuge Planning Policy (602 FW 1, 3, 4), this handbook offers guidance on how to write goals and objectives for national wildlife refuges and provides counsel on their development. While the handbook specifically addresses biology and visitor services, you can also utilize this guidance when developing goals and objectives for other refuge programs. Several assumptions are basic to this handbook. The handbook focuses on the mechanics of writing sound goals and objectives. Detailed guidance on what information to consider, collect, interpret, and synthesize into goals and objectives is beyond the scope of this handbook. It views a vision statement as the synthesis of a refuge’s purpose(s), the Refuge System mission and goals, and other biological, legal, and social concerns in which the refuge has a role. It also assumes a familiarity with the hierarchical nature of planning and where, within a planning process, the writing of goals and objectives occurs. This guidance applies to conceptual management plans, comprehensive conservation plans (CCPs), step-down management plans (e.g., habitat management, visitor services, fire management), or any other planning document incorporating goals and objectives, including strategic documents developed under the Government Performance and Results Act. We intend this guidance for use by an internal audience tasked with writing refuge goals and objectives, primarily refuge managers, biologists, visitor services specialists, planners, and other members of refuge planning teams. Still, it recognizes that we should write goals and objectives so that interested members of the public can understand them, to the extent this does not jeopardize the technical accuracy or reduce the inclusion of necessary information. The terminology and definitions used in this handbook are widely accepted in the planning field and are not inconsistent with more recent application in strategic planning. Perhaps most important, the handbook presumes all goals and objectives must further the specific purpose(s) of the refuge and the broader mission of the Refuge System, as well as be consistent with Refuge Planning Policy and any other relevant Service policy and directives.

Report↗

A Miocene termite nest from southern Argentina and its paleoclimatological implications

A Miocene termitarium attributable to the extant termite Syntermes (Isoptera: Termitidae, Nasutitermitinae) is the first fossil termite nest reported from South America and possibly the oldest record of the Isoptera from that continent. The fossil remains consist of most of the periphery of the subterranean portion of a single Syntermes nest, including chambers and both major and minor systems of anastomosed galleries. The nest occurs in the upper part of a mature paleosol near the base of the pyroclastic and eolian Miocene Pinturas Formation. A new ichnogenus and ichnospecies, Syntermesichnus fon‐tanae , is proposed for this distinctive trace fossil. It differs from nests constructed by other members of the Nasutitermitinae in its architectural organization and its large size. The type locality is situated 20° south of the southernmost dispersion of extant Syntermes. The modern distribution of this termite is wholly neotropical, suggesting that at least part of southern Patagonia experienced a tropical to subtropical climate as late as the late‐early Miocene.

Ichnos: An International Journal for Plant and Ani↗

An evaluation of the zircon method of isotopic dating in the southern Arabian Craton, Kingdom of Saudi Arabia

A zircon study has been made on 11 samples of igneous rocks from the Saudi Arabian craton. Ages of sized and magnetic fractions of zircon concentrates show variable degrees of discordance, which seem to result from a very young disturbance that produces linear arrays in the Concordia plot. Model age calculations based on a statistically and geologically reasonable lower intercept produce very consistent internal relationships. The Pan African Orogeny, considered to be responsible for loss of radiogenic argon and strontium from minerals of many rocks, does not appear to have affected the zircon data, even though uplift had exposed the rocks of the Arabian Shield at that time. Tonalite, granodiorite, and crosscutting leuco-adamellite bodies in the southern part of the An Nimas batholith yield ages in the time range 820-760 m.y. A narrow time range of 660 to 665 million years was indicated for ages of widely separated and compositionally different intrusive bodies all to the east of the An Nimas batholith. This work suggests that the younger end of the age spectrum established from regional K-Ar and Rb-Sr measurements may be underestimated, and that magmatic activity could have been more episodic than previously assumed.

Open-File Report↗

Shallow groundwater in the Matanuska-Susitna Valley, Alaska—Conceptualization and simulation of flow

The Matanuska-Susitna Valley is in the Upper Cook Inlet Basin and is currently undergoing rapid population growth outside of municipal water and sewer service areas. In response to concerns about the effects of increasing water use on future groundwater availability, a study was initiated between the Alaska Department of Natural Resources and the U.S. Geological Survey. The goals of the study were (1) to compile existing data and collect new data to support hydrogeologic conceptualization of the study area, and (2) to develop a groundwater flow model to simulate flow dynamics important at the regional scale. The purpose of the groundwater flow model is to provide a scientific framework for analysis of regional-scale groundwater availability. To address the first study goal, subsurface lithologic data were compiled into a database and were used to construct a regional hydrogeologic framework model describing the extent and thickness of hydrogeologic units in the Matanuska-Susitna Valley. The hydrogeologic framework model synthesizes existing maps of surficial geology and conceptual geochronologies developed in the study area with the distribution of lithologies encountered in hundreds of boreholes. The geologic modeling package Geological Surveying and Investigation in Three Dimensions (GSI3D) was used to construct the hydrogeologic framework model. In addition to characterizing the hydrogeologic framework, major groundwater-budget components were quantified using several different techniques. A land-surface model known as the Deep Percolation Model was used to estimate in-place groundwater recharge across the study area. This model incorporates data on topography, soils, vegetation, and climate. Model-simulated surface runoff was consistent with observed streamflow at U.S. Geological Survey streamgages. Groundwater withdrawals were estimated on the basis of records from major water suppliers during 2004-2010. Fluxes between groundwater and surface water were estimated during field investigations on several small streams. Regional groundwater flow patterns were characterized by synthesizing previous water-table maps with a synoptic water-level measurement conducted during 2009. Time-series water-level data were collected at groundwater and lake monitoring stations over the study period (2009–present). Comparison of historical groundwater-level records with time-series groundwater-level data collected during this study showed similar patterns in groundwater-level fluctuation in response to precipitation. Groundwater-age data collected during previous studies show that water moves quickly through the groundwater system, suggesting that the system responds quickly to changes in climate forcing. Similarly, the groundwater system quickly returns to long-term average conditions following variability due to seasonal or interannual changes in precipitation. These analyses indicate that the groundwater system is in a state of dynamic equilibrium, characterized by water-level fluctuation about a constant average state, with no long-term trends in aquifer-system storage. To address the second study goal, a steady-state groundwater flow model was developed to simulate regional groundwater flow patterns. The groundwater flow model was bounded by physically meaningful hydrologic features, and appropriate internal model boundaries were specified on the basis of conceptualization of the groundwater system resulting in a three-layer model. Calibration data included 173 water‑level measurements and 18 measurements of streamflow gains and losses along small streams. Comparison of simulated and observed heads and flows showed that the model accurately simulates important regional characteristics of the groundwater flow system. This model is therefore appropriate for studying regional-scale groundwater availability. Mismatch between model-simulated and observed hydrologic quantities is likely because of the coarse grid size of the model and seasonal transient effects. Next steps towards model refinement include the development of a transient groundwater flow model that is suitable for analysis of seasonal variability in hydraulic heads and flows. In addition, several important groundwater budget components remain poorly quantified—including groundwater outflow to the Matanuska River, Little Susitna River, and Knik Arm.

Alaska↗

Documentation of the Unsaturated-Zone Flow (UZF1) Package for modeling Unsaturated Flow Between the Land Surface and the Water Table with MODFLOW-2005

Percolation of precipitation through unsaturated zones is important for recharge of ground water. Rain and snowmelt at land surface are partitioned into different pathways including runoff, infiltration, evapotranspiration, unsaturated-zone storage, and recharge. A new package for MODFLOW-2005 called the Unsaturated-Zone Flow (UZF1) Package was developed to simulate water flow and storage in the unsaturated zone and to partition flow into evapotranspiration and recharge. The package also accounts for land surface runoff to streams and lakes. A kinematic wave approximation to Richards? equation is solved by the method of characteristics to simulate vertical unsaturated flow. The approach assumes that unsaturated flow occurs in response to gravity potential gradients only and ignores negative potential gradients; the approach further assumes uniform hydraulic properties in the unsaturated zone for each vertical column of model cells. The Brooks-Corey function is used to define the relation between unsaturated hydraulic conductivity and water content. Variables used by the UZF1 Package include initial and saturated water contents, saturated vertical hydraulic conductivity, and an exponent in the Brooks-Corey function. Residual water content is calculated internally by the UZF1 Package on the basis of the difference between saturated water content and specific yield. The UZF1 Package is a substitution for the Recharge and Evapotranspiration Packages of MODFLOW-2005. The UZF1 Package differs from the Recharge Package in that an infiltration rate is applied at land surface instead of a specified recharge rate directly to ground water. The applied infiltration rate is further limited by the saturated vertical hydraulic conductivity. The UZF1 Package differs from the Evapotranspiration Package in that evapotranspiration losses are first removed from the unsaturated zone above the evapotranspiration extinction depth, and if the demand is not met, water can be removed directly from ground water whenever the depth to ground water is less than the extinction depth. The UZF1 Package also differs from the Evapotranspiration Package in that water is discharged directly to land surface whenever the altitude of the water table exceeds land surface. Water that is discharged to land surface, as well as applied infiltration in excess of the saturated vertical hydraulic conductivity, may be routed directly as inflow to specified streams or lakes if these packages are active; otherwise, this water is removed from the model. The UZF1 Package was tested against the U.S. Geological Survey's Variably-Saturated Two-Dimensional Flow and Transport Model for a vertical unsaturated flow problem that includes evapotranspiration losses. This report also includes an example in which MODFLOW-2005 with the UZF1 Package was used to simulate a realistic surface-water/ground-water flow problem that includes time and space variable infiltration, evapotranspiration, runoff, and ground-water discharge to land surface and to streams. Another simpler problem is presented so that the user may use the input files as templates for new problems and to verify proper code installation.

Techniques and Methods↗

Resource estimation from historical data: Mercury, a test case

A simple technique based on historical records of tonnage and grade of ore produced provides a means for calculating how much of a mineral product will be available in the future at various average grades. Estimates made on this basis are independent of geologic considerations or changing economic and political factors, although they are based on mining history, which was largely determined by these factors. The relatively minor element, mercury, was used for the test case reported here, but the method has been found applicable to forecasts of resources for other mineral products. Mercury resources available in ore in which the average grade is as low as 0.1% are estimated to be 53 ??106kg (1.5 ??106flasks) for the United States and 1551 ??106kg (45 ??106flasks) for the world; this amount is more than adequate to meet predicted demand to the year 2000. The expectable price of mercury in 1978 dollars at this 0.1% grade is projected to be $58.75 per kg ($2,025 per flask), but at a 10% annual inflation rate, it would be more than $12,000 per flask. To satisfy just the projected U.S. demand for mercury by 2000, the price is calculated to be $48.96 per kg ($1,688 per flask) in 1978 dollars at an average annual grade of 0.12%. ?? 1980 Plenum Publishing Corporation.

Journal of the International Association for Mathe↗

Chemical and ecological health of white sucker (Catostomus Commersoni) in Rock Creek Park, Washington, D.C., 2003?04

Several classes of chemicals that are known or suspected contaminants were found in bed sediment in Rock Creek, including polyaromatic hydrocarbons (PAHs), phthalate esters, organochlorine pesticides, dioxins and furans, trace metals and metalloids (mercury, arsenic, cadmium, chromium, cobalt, copper, lead, nickel, silver, and zinc), and polychlorinated biphenyls (total PCBs and selected aroclors). Concentrations of many of these chemicals consistently exceeded thresholdor chronic-effects guidelines for the protection of aquatic life and often exceeded probable effects levels (PELs). Exceedance of PELs was dependent on the amount of total organic carbon in the sediments. Concurrent with the collection of sediment-quality data, white sucker (Catostomus commersoni) were evaluated for gross-external and internal-organ anomalies, whole-body burdens of chemical contaminants, and gut contents to determine prey. The histopathology of internal tissues of white sucker was compared to contaminant levels in fish tissue and bed sediment. Gut contents were examined to determine preferential prey and thus potential pathways for the bioaccumulation of chemicals from bed sediments. Male and female fish were tested separately. Lesions and other necroses were observed in all fish collected during both years of sample collection, indicating that fish in Rock Creek have experienced some form of environmental stress. No direct cause and effect was determined for chemical exposure and compromised fish health, but a substantial weight of evidence indicates that white sucker, which are bottom-feeding fish and low-order consumers in Rock Creek, are experiencing some reduction in vitality, possibly due to immunosuppression. Abnormalities observed in gonads of both sexes of white sucker and observations of abnormal behavior during spawning indicated some interruption in reproductive success.

Scientific Investigations Report↗

Determination of pharmaceutical compounds in surface- and ground-water samples by solid-phase extraction and high-performance liquid chromatography-electrospray ionization mass spectrometry

Commonly used prescription and over-the-counter pharmaceuticals are possibly present in surface- and ground-water samples at ambient concentrations less than 1 μg/L. In this report, the performance characteristics of a combined solid-phase extraction isolation and high-performance liquid chromatography–electrospray ionization mass spectrometry (HPLC–ESI-MS) analytical procedure for routine determination of the presence and concentration of human-health pharmaceuticals are described. This method was developed and used in a recent national reconnaissance of pharmaceuticals in USA surface waters. The selection of pharmaceuticals evaluated for this method was based on usage estimates, resulting in a method that contains compounds from diverse chemical classes, which presents challenges and compromises when applied as a single routine analysis. The method performed well for the majority of the 22 pharmaceuticals evaluated, with recoveries greater than 60% for 12 pharmaceuticals. The recoveries of angiotensin-converting enzyme inhibitors, a histamine (H2) receptor antagonist, and antihypoglycemic compound classes were less than 50%, but were retained in the method to provide information describing the potential presence of these compounds in environmental samples and to indicate evidence of possible matrix enhancing effects. Long-term recoveries, evaluated from reagent-water fortifications processed over 2 years, were similar to initial method performance. Method detection limits averaged 0.022 μg/L, sufficient for expected ambient concentrations. Compound-dependent matrix effects on HPLC/ESI-MS analysis, including enhancement and suppression of ionization, were observed as a 20–30% increase in measured concentrations for three compounds and greater than 50% increase for two compounds. Changing internal standard and more frequent ESI source maintenance minimized matrix effects. Application of the method in the national survey demonstrates that several pharmaceuticals are routinely detected at 0.010–0.100 μg/L concentrations.

Journal of Chromatography A↗

Hydratools manual version 1.0, documentation for a MATLAB ® -based post-processing package for the Sontek Hydra

The Sediment Transport Instrumentation Group (STG) at the U.S. Geological Survey (USGS) Woods Hole Science Center has a long-standing comitment to providing scientists with high quality oceanographic data. To meet this commitment, STG personnel are vigilant in checking data as well as hardware for signs of instrument malfunction. STG data sets are accompanied by processing histories to detail data processing procedures that may have modified the natural data signal while removing noise from the data. The history also allows the data to be reprocessed in the ligth of new insight into instrument function and moored conditions. This toolbox was compiled to meet these data quality commitments for data generated by Sontek Hydra systems using both ADV and PCADP probes. In the mid 1900's, the USGS Coastal and Marine Program began frequent deployments of Sontek Hydra systems in support of projects in estuaries, coastal, and continental shelf regions nationwide. Hydra data sets are large and complex in structure, and existing processing and editing tools consisted of fragments of MATLAB code written by USGS scientists to satisfy personal research needs. This code did not meet STG quality control criteria. This toolbox permits engineers and scientists to monitor data quality by: 1. processing data with interactive critical review; 2. preserving data quality indicators; 3. preserving minimally processed and partially processed versions of data sets. STG usually deploys ADV and PCADP probes configured as downward looking, mounted on bottom tripods, with the objective of measuring high-resolution near-bed currents. The velocity profiles are recorded with minimal internal data processing. Also recorded are parameters such as temperature, conductivity, optical backscatter, light transmission, and high frequency pressure. Sampling consists of high-frequency bursts(1–10 Hz) bursts of long duration (5–30 minutes) at regular and recurring intervals for a duration of 1 to 6 months. The result is very large data files, often 500 MB per Hydra, per deployment, in Sontek's compressed binary format. This section introduces the Hydratools toolbox and provides information about the history of the system's development. The USGS philosophy regarding data quality is discussed to provide an understating of the motivation for creating the system. General information about the following topics will also be discussed: hardware and software required for the system, basic processing steps, limitations of program usage, and features that are unique to the programs.

Open-File Report↗

Historical reconstructions of California wildfires vary by data source

Historical data are essential for understanding how fire activity responds to different drivers. It is important that the source of data is commensurate with the spatial and temporal scale of the question addressed, but fire history databases are derived from different sources with different restrictions. In California, a frequently used fire history dataset is the State of California Fire and Resource Assessment Program (FRAP) fire history database, which circumscribes fire perimeters at a relatively fine scale. It includes large fires on both state and federal lands but only covers fires that were mapped or had other spatially explicit data. A different database is the state and federal governments’ annual reports of all fires. They are more complete than the FRAP database but are only spatially explicit to the level of county (California Department of Forestry and Fire Protection – Cal Fire) or forest (United States Forest Service – USFS). We found substantial differences between the FRAP database and the annual summaries, with the largest and most consistent discrepancy being in fire frequency. The FRAP database missed the majority of fires and is thus a poor indicator of fire frequency or indicators of ignition sources. The FRAP database is also deficient in area burned, especially before 1950. Even in contemporary records, the huge number of smaller fires not included in the FRAP database account for substantial cumulative differences in area burned. Wildfires in California account for nearly half of the western United States fire suppression budget. Therefore, the conclusions about data discrepancies and the implications for fire research are of broad importance.

California↗

Cadmium recycling in the United States in 2000

Recycling of cadmium is a young and growing industry that has been influenced by environmental concerns and regulatory constraints. Domestic recycling of cadmium began in 1989 as a byproduct of processing of spent nickel-cadmium batteries. In 1995, International Metals Reclamation Co. Inc. expanded its operations by building a dedicated cadmium recycling plant. In 2000, an estimated 13 percent of cadmium consumption in the United States was sourced from recycled cadmium, which is derived mainly from old scrap or, to lesser degree, new scrap. The easiest forms of old scrap to recycle are small spent nickel-cadmium batteries followed by flue dust generated during recycling of galvanized steel and small amounts of alloys that contain cadmium. Most of new scrap is generated during manufacturing processes, such as nickel-cadmium battery production. All other uses of cadmium are in low concentrations and, therefore, difficult to recycle. Consequently, much of this cadmium is dissipated and lost. The amount of cadmium in scrap that was unrecovered in 2000 was estimated to be 2,030 metric tons, and an estimated 285 tons was recovered. Recycling efficiency was estimated to be about 15 percent.

Circular↗

Chemical and Ecological Health of White Sucker (Catostomus Commersoni) in Rock Creek Park, Washington, D.C., 2003-04

Several classes of chemicals that are known or suspected contaminants were found in bed sediment in Rock Creek, including polyaromatic hydrocarbons (PAHs), phthalate esters, organochlorine pesticides, dioxins and furans, trace metals and metalloids (mercury, arsenic, cadmium, chromium, cobalt, copper, lead, nickel, silver, and zinc), and polychlorinated biphenyls (total PCBs and selected aroclors). Concentrations of many of these chemicals consistently exceeded threshold or chronic-effects guidelines for the protection of aquatic life and often exceeded probable effects levels (PELs). Exceedance of PELs was dependent on the amount of total organic carbon in the sediments. Concurrent with the collection of sediment-quality data, white sucker (Catostomus commersoni) were evaluated for gross-external and internal-organ anomalies, whole-body burdens of chemical contaminants, and gut contents to determine prey. The histopathology of internal tissues of white sucker was compared to contaminant levels in fish tissue and bed sediment. Gut contents were examined to determine preferential prey and thus potential pathways for the bioaccumulation of chemicals from bed sediments. Male and female fish were tested separately. Lesions and other necroses were observed in all fish collected during both years of sample collection, indicating that fish in Rock Creek have experienced some form of environmental stress. No direct cause and effect was determined for chemical exposure and compromised fish health, but a substantial weight of evidence indicates that white sucker, which are bottom-feeding fish and low-order consumers in Rock Creek, are experiencing some reduction in vitality, possibly due to immunosuppression. Abnormalities observed in gonads of both sexes of white sucker and observations of abnormal behavior during spawning indicated some interruption in reproductive success.

Scientific Investigations Report↗