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At least 127 records · Page 7Linked to original sources

Off-channel waterbodies in the Middle Mississippi River: A pilot investigation

Off-channel and floodplain water bodies are important components of large river ecosystems while rare within the Middle Mississippi River. The lack of these habitats likely influences water quality, nutrient processing, and communities of organisms. In early 2016 a major flood event breached two levees south of Cape Girardeau, MO resulting in the creation of two new backwaters—Len Small and Backwater MO 35.5. Water quality, metabolic rate, and fish community data were collected from the new backwaters as well as Horseshow Lake an isolated floodplain lake. Backwater conditions were often different from the main channel with backwaters being warmer and with greater water clarity throughout the study. Nutrient concentrations were often different from the main channel and exhibited similar patterns to those observed in the Upper Mississippi River. One backwater showed high rates of primary productivity (NEP) along with the floodplain lake. Differences between backwater metabolic rates may be due in part to differences in size and connectivity to the river. Fish communities were different between waterbodies with a number of lacustrine species observed in the floodplain lake. Habitat and feeding guilds were also different between waterbodies. Diversity was also not significantly different between waterbodies. This study represents novel findings for off-channel habitats on the Middle Mississippi River and the opportunity to explore the establishment of new habitat types. Ultimately, we view MO 35.5, Len Small, and Horseshoe Lake as important habitats within the larger riverine ecosystem. There remains much to be learned if restoration activities based on backwater creation within the MMR are to be successful but these preliminary and early stage results indicate these areas are already providing important and variable environmental conditions to riverine organisms.

Illinois, Missouri↗

Development and evaluation of an improved TFM formulation for use in feeder stream treatments

The binational Great Lakes Fishery Commission sponsored Sea Lamprey Control Program effectively utilizes a variety of lampricide tools to keep populations of parasitic sea lampreys in the Great Lakes at levels that do not cause undue economic or ecological damage. The most widely used toxicant used in lampricide formulations is 3-trifluoromethyl-4-nitrophenol (TFM). In typical treatments, a liquid TFM formulation is applied to lamprey producing streams continuously for 10–14 hours to produce a moving block of lampricide-treated water that kills larval lamprey before they metamorphose into their parasitic lifestage. In many smaller tributaries of dendritic streams a solid bar formulation of TFM is used to supplement the mainstem treatment block. These supplemental TFM bar applications are coordinated with the arrival of the mainstem lampricide to prevent larval sea lamprey from seeking refuge in untreated waters and surviving the treatment. TFM bars are produced from formulated surfactants and designed to release TFM over an 8–10-hour period, depending on water temperature and velocity. However, some of the surfactants have been discontinued resulting in the reformulation of the TFM bars multiple times. As a result of these reformulations, TFM bar performance has declined. An experimental surfactant-free solid TFM tablet formulation was developed as a potential replacement for TFM bars. Release of TFM from the experimental tablets was evaluated using replicated laboratory dissolution trials conducted at three water temperatures and three water velocities. A continuous-flow laboratory flume was used for the dissolution trials and the decay of the tablets was modeled using logistic decay curves. Time required for the TFM tablet to decay 50 and 99% were compared among the groups using a two-way analysis of variance. Post-hoc Tukey Honest Significant Difference tests indicated that both water temperature and water velocity influenced the decay of the tablet; however, neither water temperature or water velocity appeared to dramatically influence TFM release. Results from this laboratory study indicate that the next stage of evaluating the TFM tablets using field tests is warranted.

Project Completion Report↗

Distribution of niclosamide following granular Bayer applications in lentic environments

Temporal and spatial distribution of niclosamide in the water column and sediment were evaluated after the application of granular Bayluscide in six lentic sea lamprey ( Petromyzon marinus ) larval assessment plots. Water and sediment were collected 0.25, 1, 3, 5, and 7 hours after application and were analyzed for niclosamide, the active ingredient in granular Bayluscide. Water samples were collected from five heights in the water column (1 cm, 13 cm, 26 cm, 1/2 water column, and water surface) at five locations inside and four locations 10 m outside of each assessment plot. Sediment was collected from 18 locations within each plot. Niclosamide water concentrations inside and outside of the plots did not vary by depth but did vary between plots and by time. Niclosamide water concentrations also varied by sampler location outside of the plots. Following granular Bayluscide applications the mean niclosamide concentration in water for all levels, within the plots, decreased from 0.12 mgL -1 (SD = 0.12 mgL -1 ) at 15 minutes to 0.061 mgL -1 (SD = 0.040 mgL -1 ) at hour 1. The mean niclosamide concentration in the top 4 cm of sediment was 2.9 mgkg -1 (SD = 2.4 mgkg -1 ) 15 minutes after application and was 1.3 mgkg -1 (SD = 1.8 mgkg -1 ) at hour 7. Concentrations in all sediment samples ranged from < 0.001 to 30.730 mgkg -1 and varied between the six plots. Niclosamide concentrations measured in sediment samples were more than 1 order of magnitude greater than in the water and varied spatially by over 4 orders of magnitude.

Michigan, Wisconsin↗

Lampricide residues in sea lamprey larvae carcasses recovered after 3-trifluoromethyl-4- nitrophenol (TFM) or TFM/Bayluscide stream treatments

Lampricide concentrations in whole larval sea lamprey ( Petromyzon marinus ) carcasses collected after lampricide treatments were determined to support risk assessment for non-target organisms that may consume lampricide-laden carcasses. Dead larvae were collected by Sea Lamprey Control personnel following the Ford River (Delta County, Michigan) 4.1 mg·L -1 3-trifluoromethyl-4-nitrophenol (TFM) treatment, Sturgeon River (Baraga County, Michigan) 0.64 mg·L -1 /7.1 µg·L -1 TFM/niclosamide treatment, and two treatments on the Chippewa River (Isabella County, Michigan). The upper reach of the Chippewa River was treated with 3.1 mg·L -1 /33 µg·L -1 TFM/Bayluscide and the lower reach was treated with 4.1 mg·L -1 TFM. Carcasses were removed from each stream via scap nets immediately after treatment completion. To assess instream degradation, half of the collected carcasses from both Chippewa River treatments were placed in cages and returned to the river for 2 days before they were analyzed for lampricide residues. The estimated mean and standard error of the mean (SEM) TFM concentration in the fresh carcasses (n = 80) collected from all the TFM and TFM/Bayluscide treated rivers was 4.6 µg·g -1 (SEM =1.1 µg·g -1 ). The mean concentration of niclosamide (the active ingredient in Bayluscide) in the fresh carcasses (n = 40) from the two rivers treated with TFM/ Bayluscide was 0.49 µg·g -1 (SEM = 0.21 µg·g -1 ). The mean 2-day postmortem carcasses from the Chippewa River TFM/Bayluscide treatment contained 0.14 µg·g -1 (3%) of the TFM and 0.41 µg·g -1 (64%) of the niclosamide found in the fresh-carcass group (4.4 µg·g -1 TFM and 0.64 µg·g -1 niclosamide). The mean 2-day postmortem carcasses from the Chippewa River TFM treatment contained 0.72 µg·g -1 (12%) compared to the 6.1 µg·g -1 of TFM found in the fresh-carcass group.

Michigan↗

Use of an artificial stream to monitor avoidance behavior of larval sea lamprey in response to TFM and niclosamide

The lampricide 3-trifluoromethyl-4-nitrophenol (TFM) has been used in liquid form to control larval sea lamprey ( Petromyzon marinus ) in Great Lakes tributaries since the late 1950s. In the 1980s a dissolvable TFM bar was developed as a supplemental tool for application to small tributaries as a deterrent to larvae seeking water not activated with TFM. The size, mass, and number of bars needed in some streams, as well as the location of the streams, limit the utility of a TFM bar. The development and use of an alternative niclosamide bar has the potential to use fewer bars to achieve similar results. However, the use of a niclosamide bar is dependent upon its larval deterrent capability compared to the TFM bar. In this study, we developed a laboratory-scale, simulated stream fluvarium with several avoidance areas including two side channels and a seep. The objective was to evaluate the deterrent capabilities of TFM and niclosamide. We found sea lamprey to have similar behavioral responses, with both TFM and niclosamide having similar capabilities to prevent sea lamprey from seeking refuge in side channels and seep avoidance areas. TFM-treated side channels and seep increased sea lamprey occupancy in the main channel 2.56 times more than the untreated-controls (95% CI 1.63 – 4.14) whereas niclosamide-treated side channels and seep increased sea lamprey occupancy of the main channel 2.68 times more than the untreated-controls (95% CI 1.72 – 4.32). These responses indicate a niclosamide bar would effectively prevent sea lamprey escapement into freshwater during a lampricide treatment at concentrations unlikely to harm aquatic organisms.

Project Completion Report↗

Forest canopy gap dynamics: Quantifying forest gaps and understanding gap – level forest regeneration in Upper Mississippi River floodplain forests

In most forest systems, the dynamics of forest canopy gap development play an important role in the transition from relatively short-lived early successional tree species to longer-lived, late successional tree species. In resilient forest systems, tree seedlings establish within newly created canopy gaps and grow to close the gap within one or two decades of disturbance. However, evidence in portions of the Upper Mississippi River System indicates that floodplain forests do not appear to be following these same trajectories, with canopy gaps instead seeming to fail to recruit new tree seedlings and reverting to non-forested cover types. Because of the heavy dominance of short-lived tree species in current UMRS forests, there is concern that continued failure of canopy gaps to recruit back to forest could be an early indicator of long-term, widespread forest loss as gaps become larger and larger and begin to coalesce into large, non-forested areas. Little research to date has documented either the density and distribution of forest canopy gaps across the UMRS or the vegetative conditions within those gaps to provide an initial assessment of forest dynamics in those areas. The current study utilizes both remotely sensed data and field sampling to assess the conditions of forest canopy gaps within 6 navigation pools on the Upper Mississippi River and one pool on the Illinois River. In general, canopy gap distributions and characteristics are similar across the study, with most pools ranging from 3% to 5% of forest canopy in gaps. Gap sizes are also relatively uniform, with most pools averaging 0.09 to 0.14 ha per gap. The highest proportion of forest cover in canopy gaps at the pool level was driven by the total number of gaps and not gap size, indicating that canopy gap formation in this system is commonly due to individual tree or small clump mortality. Undesirable competing vegetation was dominant in most canopy gaps, with reed canarygrass and native forbs being most prevalent in upper pools and vines most problematic in the lower pools. In the upper pools, very little viable forest regeneration is occurring within canopy gaps. The viability of forest regeneration increases in middle and lower pools, though competing vegetation continues to be a problem. Overall, canopy gaps appear 3 most likely to recruit back to forest in lower pools, and chronic forest loss facilitated by regeneration failures seems most likely in upper pools. However, competing vegetation in lower pools may still interact with woody regeneration to limit effective reestablishment of forest canopy.

Illinois, Iowa, Minnesota, Missouri, Wisconsin↗

Changes in aquatic vegetation cover following lock closure on the Illinois Waterway from 2019 – 2021

Over the summer of 2020, the Illinois Waterway was closed to complete maintenance on lock chambers along the Illinois River. This closure restricted inter-pool vessel traffic along the river and potentially changed habitat characteristics for aquatic vegetation establishment and growth. To assess if patterns of vegetation establishment and growth changed during the closure, peak biomass imagery from 2019 (pre closure) and 2021 (post closure) were compared for a vegetation response. This assessment found locations where aquatic vegetation increased and locations where aquatic vegetation decreased. However, due to unforeseen limitations in vegetation and water sampling, a causal reason for observed changed in vegetation could not be established.

Illinois↗

Distribution of niclosamide following granular Bayluscide applications in lotic systems

The granular formulation of Bayluscide [Bayluscide 3.2% Granular Sea Lamprey Larvicide, granular Bayluscide (gB)] is applied in lentic and lotic systems to survey (assessment) and kill (treatment) larval sea lampreys ( Petromyzon marinus ; Linnaeus, 1758) in the Great Lakes basin. Granules are spread on the water surface, settle to the sediment surface, and dissolve. The potential risk of niclosamide exposure (2′,5-dichloro-4′-nitrosalicylanilide), the active ingredient of gB, to non-target organisms located downstream of survey plots, is a concern of partner agencies (state-level natural resource departments, U.S. Fish and Wildlife Service Ecological Services, and Fisheries and Oceans Canada Species at Risk Branch). Spatiotemporal distribution of niclosamide in the water column and sediment was evaluated in and downstream of five larval survey plots in two rivers following the application of gB. Water samples were collected at 0.25, 2, 4, 6, 8, and 24 h from three depths in the water column (10 cm above the sediment, ½ the water column depth, and the water surface) at three locations inside each survey plot, and 1 meter upstream from three sediment sample grids positioned 10, 30, and 100 m downstream. Sediment samples were collected from inside the grids at 0.25, 2, 4, 6, 8, and 24 h, and from inside the survey plots, 8 and 24 h after gB application. Niclosamide was detected in the sediment and water at all sample locations. From 2 to 24 h after application, average water concentrations 1) varied between study sites, 2) decreased from the survey plots to 100 m downstream, 3) varied by depth in the water column, and 4) decreased over time. Average sediment concentrations varied by distance downstream and time post-application, but not by study site or river. Data suggest there would be negligible exposure to non-target organisms downstream of a gB survey plot based on low niclosamide concentrations measured in the water and sediment. The depletion rate of niclosamide was also evaluated in St. Clair River sediment dosed at the field application rate. Niclosamide concentration decreased at a rate of 2.28% per hour over the 24 hours measured, equating to a half-life of 1.27 days. This indicates the length of time an organism in the sediment in a survey plot might be exposed. Underwater cameras were placed along the edge of two St. Clair River survey plots to document gB distribution on the sediment and any potential target and non-target effects. Video was inconclusive in tracking gB through the water column. Larval sea lamprey and non-target mortality were not observed. Additional video footage of one St. Clair River survey plot showed large areas of river bottom without gB.

Michigan↗

Numerical list of U.S. Geological Survey trace elements reports to September 15, 1952

This report lists in numerical order U.S. Geological Survey Trace Elements Investigations and Memorandum Reports and supersedes a similar report issued in January 1952 (TEI-202). This report contains lists not only of reports that have been transmitted to the U.S. Atomic Energy Commission, that is, those reports followed by a date, but also those reports for which tentative titles were available prior to the date of completion of this list, September 14, 1952. The reports that are in preparation and subject to change in title are indicated by an asterisk. The classifications that are shown for some of the reports issued prior to 1947 are uncertain; classifications shown are based on the best information available at the time that this report was prepared. To keep the numerical lists up to date, periodic supplements will be issued. The supplementary pages will be prepared so that they can be substituted for the pages in the present report. The Geological Survey does not have additional copies for permanent distribution of most of the reports listed, but copies of many of the completed reports can be loaned to organizations or individuals who are cooperating with the Atomic Energy Commission.

Trace Elements Investigations↗

Numerical list of U.S. Geological Survey Trace Elements Reports to April 30, 1953

This report contains 1) a list in numerical order of U.S. Geological Survey Trace Elements Investigations and Memorandum Reports, and 2) an author index for these reports. It supercedes TEI-30, issued in November 1952. This report contains lists not only of reports that have been transmitted to the U.S Atomic Energy Commission, that is, those reports followed by a date, but also those reports for which tentative titles were available prior to the date of completion of this list, April 30, 1953. The reports that are in preparation and subject to change in title are indicated by an asterisk. The classifications that are shown for some of the reports issued prior to 1947 are uncertain: classifications shown are based on the best information available at the time that this report was prepared. The Geological Survey does not have additional copies for permanent distribution of most of the reports listed, but copies of many of the completed reports can be loaned to organizations or individuals who are cooperating with the Atomic Energy Commission.

Trace Elements Investigations↗

Groundwater quality of the Gulf Coast aquifer system, Houston, Texas, 2010

During March&ndash;December 2010, the U.S. Geological Survey, in cooperation with the city of Houston, collected source-water samples from 60 municipal supply wells in the Houston area. These data were collected as part of an ongoing study to determine concentrations, spatial extent, and associated geochemical conditions that might be conducive for mobility and transport of selected naturally occurring contaminants (selected trace elements and radionuclides) in the Gulf Coast aquifer system in the Houston area. In the summers of 2007 and 2008, a reconnaissance-level survey of these constituents in untreated water from 28 municipal supply wells was completed in the Houston area. Included in this report are the complete analytical results for 47 of the 60 samples collected in 2010&mdash;those results which were received from the laboratories and reviewed by the authors as of December 31, 2010. All of the wells sampled were screened in the Gulf Coast aquifer system; 22 were screened entirely in the Evangeline aquifer, and the remaining 25 wells contained screened intervals that intersected both Evangeline and Chicot aquifers. The data documented in this report were collected as part of an ongoing study to characterize source-water-quality conditions in untreated groundwater prior to drinking-water treatment. An evaluation of contaminant occurrence in source water provides background information regarding the presence of a contaminant in the environment. Because source-water samples were collected prior to any treatment or blending that potentially could alter contaminant concentrations, the water-quality results documented by this report represent the quality of the source water, not the quality of finished drinking water provided to the public. Samples were analyzed for major ions (calcium, magnesium, potassium, sodium, bromide, chloride, fluoride, silica, and sulfate), residue on evaporation (dissolved solids), trace elements (arsenic, barium, boron, chromium, iron, lithium, manganese, molybdenum, selenium, strontium, and vanadium), and selected radionuclides (gross alpha- and beta-particle activity [at 72 hours and 30 days], carbon-14, radium-226, radon-222, and uranium). Field measurements were made of selected physicochemical (relating to both physical and chemical) properties (oxidation-reduction potential, turbidity, dissolved-oxygen concentration, pH, specific conductance, water temperature, and alkalinity) and unfiltered sulfides. Similar to the results from the reconnaissance survey, physicochemical properties, major ions, and trace elements varied considerably. The ranges of selected physicochemical properties were as follows: oxidation-reduction potential ranged from -173 to 466 millivolts, dissolved oxygen ranged from less than 0.1 to 4.4 milligrams per liter, pH ranged from 7.2 to 7.8, specific conductance ranged from 439 to 724 microsiemens per centimeter at 25 degrees Celsius, and alkalinity ranged from 159 to 276 milligrams per liter as calcium carbonate. The largest ranges in concentration for filtered major ion constituents were obtained for cations sodium and calcium and for anions chloride and sulfate. Arsenic concentrations measured in samples from the 47 wells ranged from 1.6 to 23.5 micrograms per liter. The maximum concentration of arsenic (23.5 micrograms per liter) was measured in the source-water sample from well LJ-65-12-328. Quantifiable concentrations of barium, boron, lithium, molybdenum, and strontium were measured in all 47 filtered, source-water samples. Quantifiable concentrations of manganese were measured in 46 source-water samples, and an estimated concentration of manganese was measured in 1 sample. Chromium, iron, selenium, and vanadium were detected in 24 or more of the 47 source-water samples. Gross alpha-particle activities and beta-particle activities for all 47 samples were analyzed at 72 hours after sample collection and again at 30 days after sample collection, allowing for the measurement of the activity of short-lived isotopes. Gross alpha-particle activities reported in this report were not adjusted for activity contributions by radon or uranium and, therefore, are conservatively high estimates if compared to the U.S. Environmental Protection Agency National Primary Drinking Water Regulation for adjusted gross alpha-particle activity. The gross alpha-particle activities at 30 days in the samples ranged from R0.60 to 25.5 picocuries per liter and at 72 hours ranged from 2.58 to 39.7 picocuries per liter, and the "R" preceding the value of 0.60 picocuries per liter refers to a nondetected result less than the sample-specific critical level. Gross beta-particle activities measured at 30 days ranged from 1.17 to 14.4 picocuries per liter and at 72 hours ranged from 1.97 to 4.4 picocuries per liter. Filtered uranium was detected in quantifiable amounts in all of the 47 wells sampled. The uranium concentrations ranged from 0.03 to 42.7 micrograms per liter. One sample was analyzed for carbon-14, and the amount of modern atmospheric carbon was reported as 0.2 percent. Six source-water samples collected from municipal supply wells were analyzed for radium-226, and all of the concentrations were considered detectable concentrations (greater than their associated sample-specific critical level). Three source-water samples collected were analyzed for radon-222, and all of the concentrations were substantially greater than the associated sample-specific critical level.

Texas↗

Water resources of Washakie County, Wyoming

Data on the surface- and ground-water resources are complied to summarize the water resources of Washakie County. This study, prepared in cooperation with the Wyoming State Engineer, is one in a series investigating the water resources of Wyoming counties . The three principal types of streams in the county are perennial, intermittent, and ephemeral. Perennial streams have continuous streamflows, and high streamflows are associated with snowmelt runoff; low streamflows usually occur in the winter months when the snowpack is frozen and ground-water discharge is at its smallest rate. Intermittent and ephemeral streams are characterized by periods of no flow, and high streamflows are associated with snowmelt or thunderstorms. The principal aquifers are as follows: alluvium of Quaternary age, Willwood Formation of Tertiary age, Fort Union Formation of Tertiary age, and the formations of primarily Paleozoic age--Goose Egg Formation, Tensleep Sandstone, Madison Limestone, Bighorn Dolomite, and Flathead Sandstone. Reported yields from wells completed in the alluvium ranged from 10 to 40 gallons per minute, and reported yields from wells completed in the Willwood Formation ranged from 1 to 28 gallons per minute. Yields as large as 2,500 gallons per minute are reported from wells completed in the Madison Limestone, Bighorn Dolomite, and Flathead Sandstone. Calcium magnesium sodium sulfate water and sodium sulfate water with concentrations of dissolved solids greater than 1,000 milligrams per liter are common in the alluvium, Willwood Formation and Fort Union Formation. Water samples from six of eight wells completed in the Willwood Formation have trace concentrations of herbicides. Calcium carbonate water with small dissolved-solids concentrations is common in the aquifers in Paleozoic formations.

Wyoming↗

Wind River watershed restoration, annual report November 2009 to October 2010.

This report summarizes work completed by U.S. Geological Survey’s Columbia River Research Laboratory (USGS-CRRL) in the Wind River subbasin during the period November 2009 through October 2010 under Bonneville Power Administration (BPA) contract 46102. Long term research in the Wind River has focused on assessments of steelhead/rainbow trout Oncorhynchus mykiss populations, interactions with introduced populations of spring Chinook salmon O. tshawytscha and brook trout Salvelinus fontinalis, and influences of habitat variables and habitat restoration on fish productivity. During the period covered by this report, we collected water temperature data to characterize variation within and among tributaries and mainstem sections in the Trout Creek watershed, and assisted Washington Department of Fish and Wildlife (WDFW) with smolt trapping and tagging of smolt and parr steelhead with passive integrated transponder (PIT) tags. We also continued to maintain and test efficacy of a passive integrated transponder tag interrogation system (PTIS) in Trout Creek for assessing the adult steelhead runsize. A statement of work (SOW) was submitted to BPA in October 2009 that outlined work to be performed by USGS-CRRL. The SOW was organized by work elements, with each describing a research task. This report summarizes the progress completed under each work element.

Report↗

Wind River Watershed Restoration: Annual report April 2006 to March 2007

This report summarizes work completed by U.S. Geological Survey’s Columbia River Research Laboratory (USGS-CRRL) in the Wind River subbasin during the period April 2006 through March 2007 under Bonneville Power Administration (BPA) contract 26922. During this period, we collected temperature, flow, and habitat data to characterize physical habitat condition and variation within and among tributaries and mainstem sections in the Wind River subbasin. We also conducted electrofishing and snorkeling surveys to determine juvenile salmonid populations within select study areas throughout the subbasin. Portions of this work were completed with additional funding from U.S. Fish and Wildlife Service (USFWS) and the Lower Columbia Fish Enhancement Group (LCFEG). Funding from USFWS was for work to contribute to a study of potential interactions between introduced Chinook salmon Oncorhynchus tshawytscha and wild steelhead O. mykiss. Funding from LCFEG was for work to evaluate the effects of nutrient enrichment in small streams. A statement of work (SOW) was submitted to BPA in March 2006 that outlined work to be performed by USGS-CRRL. The SOW was organized by work elements, with each describing a research task. This report summarizes the progress completed under each work element.

Washington↗

Comprehensive Areal Model of Earthquake-Induced Landslides: Technical Specification and User Guide

This report describes the complete design of a comprehensive areal model of earthquakeinduced landslides (CAMEL). This report presents the design process, technical specification of CAMEL. It also provides a guide to using the CAMEL source code and template ESRI ArcGIS map document file for applying CAMEL, both of which can be obtained by contacting the authors. CAMEL is a regional-scale model of earthquake-induced landslide hazard developed using fuzzy logic systems. CAMEL currently estimates areal landslide concentration (number of landslides per square kilometer) of six aggregated types of earthquake-induced landslides - three types each for rock and soil.

Open-File Report↗

Wind River water restoration, Annual report November 2008 to October 2009.

This report summarizes work completed by U.S. Geological Survey’s Columbia River Research Laboratory (USGS-CRRL) in the Wind River subbasin during the period November 2008 through October 2009 under Bonneville Power Administration (BPA) contract 41038. Long term research in the Wind River has focused on assessments of steelhead/rainbow trout Oncorhynchus mykiss populations, interactions with introduced populations of spring Chinook salmon O. tshawytscha and brook trout Salvelinus fontinalis, and influences of habitat variables on fish productivity. During this period, we collected water temperature data to characterize variation within and among tributaries and mainstem sections in the Trout Creek watershed, and assisted Washington Department of Fish and Wildlife with smolt trapping and tagging of smolt and parr steelhead with passive integrated transponder (PIT) tags. We also continued to maintain and test efficacy of a passive integrated transponder tag interrogation system (PTIS) in Trout Creek for assessing the adult steelhead runsize. We continued to maintain and download PTIS setups in the fish ladder at Hemlock Dam. These PTISs contributed information on movement and rearing of steelhead parr and smolts. A statement of work (SOW) was submitted to BPA in October 2009 that outlined work to be performed by USGS-CRRL. The SOW was organized by work elements, with each describing a research task. This report summarizes the progress completed under each work element.

Report↗

Recommended reporting standards for test accuracy studies of infectious diseases of finfish, amphibians, molluscs and crustaceans: the STRADAS-aquatic checklist

Complete and transparent reporting of key elements of diagnostic accuracy studies for infectious diseases in cultured and wild aquatic animals benefits end-users of these tests, enabling the rational design of surveillance programs, the assessment of test results from clinical cases and comparisons of diagnostic test performance. Based on deficiencies in the Standards for Reporting of Diagnostic Accuracy (STARD) guidelines identified in a prior finfish study (Gardner et al. 2014), we adapted the Standards for Reporting of Animal Diagnostic Accuracy Studies&mdash;paratuberculosis (STRADAS-paraTB) checklist of 25 reporting items to increase their relevance to finfish, amphibians, molluscs, and crustaceans and provided examples and explanations for each item. The checklist, known as STRADAS-aquatic, was developed and refined by an expert group of 14 transdisciplinary scientists with experience in test evaluation studies using field and experimental samples, in operation of reference laboratories for aquatic animal pathogens, and in development of international aquatic animal health policy. The main changes to the STRADAS-paraTB checklist were to nomenclature related to the species, the addition of guidelines for experimental challenge studies, and the designation of some items as relevant only to experimental studies and ante-mortem tests. We believe that adoption of these guidelines will improve reporting of primary studies of test accuracy for aquatic animal diseases and facilitate assessment of their fitness-for-purpose. Given the importance of diagnostic tests to underpin the Sanitary and Phytosanitary agreement of the World Trade Organization, the principles outlined in this paper should be applied to other World Organisation for Animal Health (OIE)-relevant species.

Diseases of Aquatic Organisms↗

Water resources data, New Mexico, water year 1989

This annual hydrologic data report of New Mexico is one of a series of annual reports that document hydrologic data gathered frOm the u.s. Geological Survey's surface- and ground-water data-collection networks in each State, Puerto Rico, and the Trust Territories. These records of streamflow, ground-water levels, and water quality provide the hydrologic information needed by Federal, State, and local agencies and the private sector for developing and managing our Nation's land and water resources. Hydrologic data for New Mexico are contained in this volume. This report is the culmination of a concerted effort by dedicated personnel of the u.S. Geological Survey who collected, compiled, analyzed, verified, and organized the data, and who typed, edited, and assembled the report. The authors had primary responsibility for assuring that the information contained herein is accurate, complete, and adheres to Geological Survey policy and established guidelines. The following individuals contributed significantly to the completion of the report: Linda V. Beal Harriet R. Allen K.M. Lange, M.F. Ortiz, and L.A. Watson processed the text of the report, and H.M. Grossman drafted the illustrations.

New Mexico↗