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Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the South Helmand mineral district in Afghanistan: Chapter O in Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan

The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the South Helmand mineral district, which has travertine deposits. ALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420–500 nanometer, nm), green (520–600 nm), red (610–690 nm), and near-infrared (760–890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520–770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency (©JAXA, 2008, 2010), but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement. The selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. Therefore, it was necessary to (1) register the 10-m AVNIR multispectral imagery to a well-controlled Landsat image base, (2) mosaic the individual multispectral images into a single image of the entire area of interest, (3) register each panchromatic image to the registered multispectral image base, and (4) mosaic the individual panchromatic images into a single image of the entire area of interest. The two image-registration steps were facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band’s picture element based on the digital values of all picture elements within a 500-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands). All image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area’s local zone (41 for South Helmand) and the WGS84 datum. The final image mosaics were subdivided into eight overlapping tiles or quadrants because of the large size of the target area. The eight image tiles (or quadrants) for the South Helmand area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image.

South Helmand Mineral District↗

Identifying the decision to be supported: a review of papers from environmental modelling and software

Two of the basic tenets of decision support system efforts are to help identify and structure the decisions to be supported, and to then provide analysis in how those decisions might be best made. One example from wetland management would be that wildlife biologists must decide when to draw down water levels to optimise aquatic invertebrates as food for breeding ducks. Once such a decision is identified, a system or tool to help them make that decision in the face of current and projected climate conditions could be developed. We examined a random sample of 100 papers published from 2001-2011 in Environmental Modelling and Software that used the phrase “decision support system” or “decision support tool”, and which are characteristic of different sectors. In our review, 41% of the systems and tools related to the water resources sector, 34% were related to agriculture, and 22% to the conservation of fish, wildlife, and protected area management. Only 60% of the papers were deemed to be reporting on DSS. This was based on the papers reviewed not having directly identified a specific decision to be supported. We also report on the techniques that were used to identify the decisions, such as formal survey, focus group, expert opinion, or sole judgment of the author(s). The primary underlying modelling system, e.g., expert system, agent based model, Bayesian belief network, geographical information system (GIS), and the like was categorised next. Finally, since decision support typically should target some aspect of unstructured decisions, we subjectively determined to what degree this was the case. In only 23% of the papers reviewed, did the system appear to tackle unstructured decisions. This knowledge should be useful in helping workers in the field develop more effective systems and tools, especially by being exposed to the approaches in different, but related, disciplines. We propose that a standard blueprint for reporting on DSS be developed for consideration by journal editors to aid them in filtering papers that use the term, “decision support”.

Leipzig↗

Feline immunodeficiency virus cross-species transmission: Implications for emergence of new lentiviral infections

Owing to a complex history of host-parasite coevolution, lentiviruses exhibit a high degree of species specificity. Given the well-documented viral archeology of HIV emergence following human exposures to SIV, understanding processes that promote successful cross-species lentiviral transmissions is highly relevant. We have previously reported natural cross-species transmission of a subtype of feline immunodeficiency virus, puma lentivirus A (PLVA), between bobcats ( Lynx rufus ) and mountain lions ( Puma concolor ) in a small number of animals in California and Florida. In this study we investigate host-specific selection pressures, within-host viral fitness, and inter- vs. intra-species transmission patterns among a larger collection of PLV isolates from free-ranging bobcats and mountain lions. Analysis of proviral and viral RNA levels demonstrates that PLVA fitness is severely restricted in mountain lions compared to bobcats. We document evidence of diversifying selection in three of six PLVA genomes from mountain lions, but did not detect selection among twenty PLVA isolates from bobcats. These findings support that PLVA is a bobcat-adapted virus, which is less fit in mountain lions and under intense selection pressure in the novel host. Ancestral reconstruction of transmission events reveals intraspecific PLVA transmission has occurred among panthers ( Puma concolor coryi ) in Florida following initial cross-species infection from bobcats. In contrast, interspecific transmission from bobcats to mountain lions predominates in California. These findings document outcomes of cross-species lentiviral transmission events among felids that compare to emergence of HIV from nonhuman primates. IMPORTANCE Cross-species transmission episodes can be singular, dead-end events or can result in viral replication and spread in the new species. The factors that determine which outcome will occur are complex, and the risk of new virus emergence is therefore difficult to predict. Here we use molecular techniques to evaluate transmission, fitness, and adaptation of puma lentivirus A (PLVA) between bobcats and mountain lions in two geographic regions. Our findings illustrate that mountain lion exposure to PLVA is relatively common, but does not routinely result in infections communicable in the new host. This is attributed to efficient species barriers that largely prevent lentiviral adaptation. However, the evolutionary capacity for lentiviruses to adapt to novel environments may ultimately overcome host restriction mechanisms over time and under certain ecological circumstances. This phenomenon provides a unique opportunity to examine cross-species transmission events leading to new lentiviral emergence.

California, Florida↗

Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan

The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This DS consists of the locally enhanced ALOS image mosaics for each of the 24 mineral project areas (referred to herein as areas of interest), whose locality names, locations, and main mineral occurrences are shown on the index map of Afghanistan (fig. 1). ALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420-500 nanometer, nm), green (520-600 nm), red (610-690 nm), and near-infrared (760-890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520-770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency, but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement. The selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. Therefore, it was necessary to (1) register the 10-m AVNIR multispectral imagery to a well-controlled Landsat image base, (2) mosaic the individual multispectral images into a single image of the entire area of interest, (3) register each panchromatic image to the registered multispectral image base, and (4) mosaic the individual panchromatic images into a single image of the entire area of interest. The two image-registration steps were facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. PRISM image orthorectification for one-half of the target areas was performed by the Alaska Satellite Facility, applying its photogrammetric software to PRISM stereo images with vertical control points obtained from the digital elevation database produced by the Shuttle Radar Topography Mission (Farr and others, 2007) and horizontal adjustments based on a controlled Landsat image base (Davis, 2006). Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using SPARKLE logic, which is described in Davis (2006). Each of the four-band images within each resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band's picture element based on the digital values of all picture elements within a specified radius that was usually 500 m. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands). All image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area's local zone (either 41 or 42) and the WGS84 datum. Most final image mosaics were subdivided into overlapping tiles or quadrants because of the large size of the target areas. The image tiles (or quadrants) for each area of interest are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image. Approximately one-half of the study areas have at least one subarea designated for detailed field investigations; the subareas were extracted from the area's image mosaic and are provided as separate embedded geotiff images.

Data Series↗

Water volume and sediment accumulation in Lake Linganore, Frederick County, Maryland, 2009

To assist in understanding sediment and phosphorus loadings and the management of water resources, a bathymetric survey was conducted at Lake Linganore in Frederick County, Maryland in June 2009 by the U.S. Geological Survey, in cooperation with the City of Frederick and Frederick County, Maryland. Position data and water-depth data were collected using a survey grade echo sounder and a differentially corrected global positioning system. Data were compiled and edited using geographic information system software. A three-dimensional triangulated irregular network model of the lake bottom was created to calculate the volume of stored water in the reservoir. Large-scale topographic maps of the valley prior to inundation in 1972 were provided by the City of Frederick and digitized. The two surfaces were compared and a sediment volume was calculated. Cartographic representations of both water depth and sediment accumulation were produced along with an area/capacity table. An accuracy assessment was completed on the resulting bathymetric model. Vertical accuracy at the 95-percent confidence level for the collected data, the bathymetric surface model, and the bathymetric contour map was calculated to be 0.95 feet, 1.53 feet, and 3.63 feet, respectively. The water storage volume of Lake Linganore was calculated to be 1,860 acre-feet at full pool elevation. Water volume in the reservoir has decreased by 350 acre-feet (about 16 percent) in the 37 years since the dam was constructed. The total calculated volume of sediment deposited in the lake since 1972 is 313 acre-feet. This represents an average rate of sediment accumulation of 8.5 acre-feet per year since Linganore Creek was impounded. A sectional analysis of sediment distribution indicates that the most upstream third of Lake Linganore contains the largest volume of sediment whereas the section closest to the dam contains the largest amount of water. In comparison to other Maryland Piedmont reservoirs, Lake Linganore was found to have one of the lowest sedimentation rates at 0.26 cubic yards per year per acre of drainage area. Sedimentation rates in other comparable Maryland reservoirs were Prettyboy Reservoir (filling at a rate of 2.26 cubic yards per year per acre), Loch Raven Reservoir (filling at a rate of 0.88 cubic yards per year per acre) and Piney Run Reservoir (filling at a negligible rate).

Scientific Investigations Report↗

Freezing in a warming climate: Marked declines of a subnivean hibernator after a snow drought

Recent snow droughts associated with unusually warm winters are predicted to increase in frequency and affect species dependent upon snowpack for winter survival. Changes in populations of some cold‐adapted species have been attributed to heat stress or indirect effects on habitat from unusually warm summers, but little is known about the importance of winter weather to population dynamics and how responses to snow drought vary among sympatric species. We evaluated changes in abundance of hoary marmots ( Marmota caligata ) over a period that included a year of record‐low snowpack to identify mechanisms associated with weather and snowpack. To consider interspecies comparisons, our analysis used the same a priori model set as a concurrent study that evaluated responses of American pikas ( Ochotona princeps ) to weather and snowpack in the same study area of North Cascades National Park, Washington, USA. We hypothesized that marmot abundance reflected mechanisms related to heat stress, cold stress, cold exposure without an insulating snowpack, snowpack duration, atmospheric moisture, growing‐season precipitation, or select combinations of these mechanisms. Changes in marmot abundances included a 74% decline from 2007 to 2016 and were best explained by an interaction of chronic dryness with exposure to acute cold without snowpack in winter. Physiological stress during hibernation from exposure to cold, dry air appeared to be the most likely mechanism of change in marmot abundance. Alternative mechanisms associated with changes to winter weather, including early emergence from hibernation or altered vegetation dynamics, had less support. A post hoc assessment of vegetative phenology and productivity did not support vegetation dynamics as a primary driver of marmot abundance across years. Although marmot and pika abundances were explained by strikingly similar models over periods of many years, details of the mechanisms involved likely differ between species because pika abundances increased in areas where marmots declined. Such differences may lead to diverging geographic distributions of these species as global change continues.

Washington↗

Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Haji-Gak mineral district in Afghanistan: Chapter C in Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan

The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the Haji-Gak mineral district, which has iron ore deposits. ALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420-500 nanometer, nm), green (520-600 nm), red (610-690 nm), and near-infrared (760-890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520-770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency ((c)JAXA,2006,2007), but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement. The selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. For this particular area, PRISM image orthorectification was performed by the Alaska Satellite Facility, applying its photogrammetric software to PRISM stereo images with vertical control points obtained from the digital elevation database produced by the Shuttle Radar Topography Mission (Farr and others, 2007) and horizontal adjustments based on a controlled Landsat image base (Davis, 2006). The 10-m AVNIR multispectral imagery was then co-registered to the orthorectified PRISM images and individual multispectral and panchromatic images were mosaicked into single images of the entire area of interest. The image-coregistration was facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band's picture element based on the digital values of all picture elements within a 500-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands). All image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area's local zone (42 for Haji-Gak) and the WGS84 datum. The final image mosaics were subdivided into three overlapping tiles or quadrants because of the large size of the target area. The three image tiles (or quadrants) for the Haji-Gak area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image. Within the Haji-Gak study area, three subareas were designated for detailed field investigations (that is, the Haji-Gak Prospect, Farenjal, and NE Haji-Gak subareas); these subareas were extracted from the area's image mosaic and are provided as separate embedded geotiff images.

Bamyan;Parwan;Wardak↗

Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Ghunday-Achin mineral district in Afghanistan, in Davis, P.A, compiler, Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan

The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the Ghunday-Achin mineral district, which has magnesite and talc deposits. ALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420–500 nanometer, nm), green (520–600 nm), red (610–690 nm), and near-infrared (760–890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520–770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency (©JAXA,2008,2009), but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement. The selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. For this particular area, PRISM image orthorectification was performed by the Alaska Satellite Facility, applying its photogrammetric software to PRISM stereo images with vertical control points obtained from the digital elevation database produced by the Shuttle Radar Topography Mission (Farr and others, 2007) and horizontal adjustments based on a controlled Landsat image base (Davis, 2006). The 10-m AVNIR multispectral imagery was then coregistered to the orthorectified PRISM images and individual multispectral and panchromatic images were mosaicked into single images of the entire area of interest. The image coregistration was facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band’s picture element based on the digital values of all picture elements within a 500-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands). All image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area’s local zone (42 for Ghunday-Achin) and the WGS84 datum. The final image mosaics were subdivided into six overlapping tiles or quadrants because of the large size of the target area. The six image tiles (or quadrants) for the Ghunday-Achin area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image. Within the Ghunday-Achin study area, two subareas were designated for detailed field investigations (that is, the Achin-Magnesite and Ghunday-Mamahel subareas); these subareas were extracted from the area’s image mosaic and are provided as separate embedded geotiff images.

Data Series↗

Paleomagnetism of the Late Triassic Hound Island Volcanics: Revisited

The collision and accretion of the Alexander terrane profoundly influenced the geologic history of Alaska and western Canada; however, the terrane's displacement history is only poorly constrained by sparse paleomagnetic studies. We studied the paleomagnetism of the Hound Island Volcanics in order to evaluate the location of the Alexander terrane in Late Triassic time. We collected 618 samples at 102 sites in and near the Keku Strait, Alaska, from the Late Triassic Hound Island Volcanics, the Permian Pybus Formation, and 23-Ma gabbroic intrusions. We found three components of magnetization in the Hound Island Volcanics. The high-temperature component (component A) resides in hematite and magnetite and was found only in highly oxidized lava flows in a geographically restricted area. We think it is primary, or acquired soon after eruption of the lavas, principally because the directions pass a fold test. The paleolatitude indicated by this component (19.2° ± 10.3°) is similar to those determined for various portions of Wrangellia, consistent with the geologic interpretation that the Alexander terrane was with the Wrangellia terrane in Late Triassic time. We found two overprint directions in the Hound Island Volcanics. Component B was acquired 23 m.y. ago due to intrusion of gabbroic dikes and sills. This interpretation is indicated by the similarity of upper-hemisphere directions in the Hound Island Volcanics to those in the gabbro. Component C, found in both the Hound Island Volcanics and the Permian Pybus Formation, is oriented northeast and down, fails a regional fold test, and was acquired after regional deformation around 90 to 100 Ma. This overprint direction yields a paleolatitude similar to, but slightly higher than, slightly older rocks from the Coast Plutonic Complex, suggesting that the Alexander terrane was displaced 17° in early Late Cretaceous time. The occurrence of these two separate overprinting events provides a satisfying explanation of the earlier puzzling results from the Hound Island Volcanics (Hillhouse and Grommé, 1980). Finally, great-circle analysis of the paleomagnetic data from the Pybus Formation suggests the Alexander terrane may have been in the northern hemisphere in Permian time.

Alaska↗

Assessment of coastal and fluvial morphodynamic changes using Structure-for-Motion: A case study of the Sfȃntu Gheorghe Mouth (Danube Delta, Romania)

The ability to accurately map erosion, flooding, and habitat loss in coastal environments is crucial for formulating national strategies aimed at preventing and mitigating the impacts of natural disasters. A fundamental component of this process is the implementation of coastal morphodynamics monitoring through Structure-from-Motion (SfM) techniques, utilizing high-resolution 2D/3D data obtained from aerial photogrammetry. To assess morphodynamic changes over a three-year period (2022 – 2024), several SfM-based photogrammetric studies were conducted, each year, in the Romanian sector of the Danube-Black Sea coastal zone, specifically at the mouth of one of the Danube River distributaries (Sf Gheorghe branch) into the Black Sea, and along the left bank, near Sf Gheorghe locality, located within the Danube Delta Biosphere Reserve (DDBR). The essential equipment for aerial photogrammetry comprises Unmanned Aerial Vehicles (UAVs) and Global Navigation Satellite Systems (GNSS). In this study, the UAV used was a DJI Mavic 3T (Enterprise/Thermal) drone, complemented by two Trimble R12i and R4 GNSS systems, as well as approximately 10 Ground Control Points (GCPs). Data acquisition and processing were carried out using specialized photogrammetric software (Agisoft Metashape) along with various GIS tools (e.g., Blue Marble Geographics Global Mapper and ESRI ArcMap). The photogrammetric products generated for the study, as detailed in this paper, include Digital Elevation Models (DEMs), Digital Terrain Models (DTMs), orthomosaics (orthophotos), and others. At Sfântu Gheorghe beach, a comparison between 2023 and 2024 photogrammetric surveys revealed that the left bank of the Sf. Gheorghe Arm, at the river mouth into the Black Sea, suffered from a twist (erosion) of up to 64 metres. Additionally, on the selected perimetre (total area of 31,910 square meters ) from the beach and dune zone of Sf. Gheorghe, an area of up to 16,202 square meters was eroded between 2023 and 2024. This contrasts with the period between 2022 and 2023, during which deposition predominated. Erosion at the Danube mouths and the adjacent Black Sea coastline is driven by a complex interaction of natural and anthropogenic factors. Natural processes, including subsidence, sea-level rise, and episodic extreme storm events, contribute significantly to coastal dynamics. Meanwhile, human-induced factors, such as upstream hydrotechnical works that limits sediment transport, cutting of navigation canals, as well as the exacerbating effects of climate change, further accelerate erosion. The recent Structure-from-Motion (SfM) surveys provide essential quantitative data, enabling a detailed analysis of both short-term and long-term morphodynamic changes influenced by seasonal variations and extreme hydrometeorological events in this highly dynamic coastal system.

Sfȃntu Gheorghe Mouth (Danube Delta)↗

Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Kharnak-Kanjar mineral district in Afghanistan: Chapter K in Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan

The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the Kharnak-Kanjar mineral district, which has mercury deposits. ALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420–500 nanometer, nm), green (520–600 nm), red (610–690 nm), and near-infrared (760–890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520–770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency (©JAXA,2007,2008,2010), but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement. The selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. For this particular area, PRISM image orthorectification was performed by the Alaska Satellite Facility, applying its photogrammetric software to PRISM stereo images with vertical control points obtained from the digital elevation database produced by the Shuttle Radar Topography Mission (Farr and others, 2007) and horizontal adjustments based on a controlled Landsat image base (Davis, 2006). The 10-m AVNIR multispectral imagery was then coregistered to the orthorectified PRISM images and individual multispectral and panchromatic images were mosaicked into single images of the entire area of interest. The image coregistration was facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band's picture element based on the digital values of all picture elements within a 1,000-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands). All image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area's local zone (41 for Kharnak-Kanjar) and the WGS84 datum. The final image mosaics were subdivided into eight overlapping tiles or quadrants because of the large size of the target area. The eight image tiles (or quadrants) for the Kharnak-Kanjar area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image. Within the Kharnak-Kanjar study area, three subareas were designated for detailed field investigations (that is, the Koh-e-Katif Passaband, Panjshah-Mullayan, and Sahebdad-Khanjar subareas); these subareas were extracted from the area's image mosaic and are provided as separate embedded geotiff images.

Farah;Ghor;Daykundi↗

Archive of U.S. Geological Survey selected single-beam bathymetry datasets, 1969-2000

New national programs, as well as natural and man-made disasters, have raised awareness about the need to find new and improved ways to share information about the coastal and marine environment with a wide-ranging public audience. The U.S. Geological Survey (USGS) Coastal and Marine Geology Program (CMGP) has begun a large-scale effort to incorporate the program's published, digital geophysical data into a single point of access known as the Coastal and Marine Geoscience Data System (CMGDS) (http://cmgds.marine.usgs.gov/). To aid in data discovery, work is also being done to import CMGP data into highly visible data and information resources, such as the National Oceanic and Atmospheric Administration's (NOAA) National Geophysical Data Center (NGDC) and two widely used Earth-science tools, GeoMapApp (GMA) (http://www.geomapapp.org) and Virtual Ocean (VO) (http://www.virtualocean.org/). This task of the CMGP Integrated Data Management System project will help support information exchange with partners, regional planning groups, and the public, as well as facilitate integrated spatial-data analysis. Sharing USGS-CMGP geophysical data via CMGDS, NGDC, GMA, and VO will aid data discovery and enable the data to support new purposes beyond those for which the data were originally intended. In order to make data available to NGDC, and from there into GMA and VO, the data must be reformatted into a standard exchange format and published. In 1977, a group of geophysical data managers from the public and private sectors developed the MGD77 format as the standard exchange format for geophysical data. In 2010, a tab-delimited version of the format was added as MGD77T (Hittelman and others, 1977). The MGD77T geophysical data format can include bathymetry, magnetics, gravity, and seismic navigation data. It is used for the transmission of data between marine institutions, data centers, and can be used by various software programs as an exchange format. A header (documentation) file and data file are created for each survey (Hittelman and others, 1977). More details about the MGD77T format are available at http://www.ngdc.noaa.gov/mgg/dat/geodas/docs/mgd77.pdf (74MB PDF). This archive describes the detailed steps used to convert single-beam bathymetry and navigation files into the MGD77T format (Hittelman and others, 1977) for submission to NGDC and formal Federal Geographic Data Committee (FGDC) (http://www.fgdc.gov/metadata) metadata as a publication of these single-beam bathymetry datasets.

Data Series↗

Evaluation of best management practices at an edge-of-field site in the Eagle Creek watershed, Ohio, 2012–20

In 2010, the U.S. Geological Survey worked in partnership with the Great Lakes Restoration Initiative and the Natural Resources Conservation Service to identify farm fields in priority watersheds—watersheds critically important to Great Lake health. Intensive best management practices were implemented in five States to test the efficacy of best management practices, also referred to as agricultural conservation practices, to reduce sediment and nutrient runoff on agricultural fields. These fields were chosen as representatives of the priority watersheds because their farming practices and geographical conditions were common among farms in those watersheds. A farm site located near Findlay, Ohio, in the Eagle Creek watershed used two conservation practices, cover crop (Natural Resources Conservation Service practice standard 340) and variable rate technology (VRT; Natural Resources Conservation Service practice standard 590), which represent common practices in the Maumee priority watershed. This study monitored surface runoff and subsurface tile runoff at the Eagle Creek watershed site. The effects of cover crop and VRT nutrient application on sediment and nutrient runoff were assessed from October 2012 to September 2020. Cover crops were applied in fall of 2016, 2017, and 2018, coinciding with VRT applications. The following parameters were analyzed as part of the study: runoff discharge; peak discharge; and concentrations and loads of total phosphorus, particulate phosphorus, dissolved reactive phosphorus, and suspended sediment. High peak runoff events disproportionally affected nutrient concentrations and loads in runoff. A threshold of the 85th percentile of the peak discharge was chosen to assess the effect of cover crop and VRT nutrient application on nutrient mitigation at each gage. Runoff events below the 85th percentile were considered small, and runoff events over the 85th percentile were considered large. Concentrations from collected water-quality samples were used for the analysis; estimated concentrations were excluded from the statistical evaluation. All surface runoff parameters during small runoff events, except surface runoff volume, were significantly lower in the period with cover crops and VRT implementation. Contrarily, subsurface runoff parameters during small events were not statistically different between the periods with and without cover crops and VRT implementation. Surface and subsurface parameters during large events were also not statistically different between the periods with and without cover crops and VRT implementation. These results indicate cover crops and VRT may improve water quality during small runoff events, but additional best management practices that mitigate large runoff events may lead to greater water-quality improvement given the contribution of large events to overall losses.

Ohio↗

Mapping migratory flyways in Asia using dynamic Brownian bridge movement models

Background Identifying movement routes and stopover sites is necessary for developing effective management and conservation strategies for migratory animals. In the case of migratory birds, a collection of migration routes, known as a flyway, is often hundreds to thousands of kilometers long and can extend across political boundaries. Flyways encompass the entire geographic range between the breeding and non-breeding areas of a population, species, or a group of species, and they provide spatial frameworks for management and conservation across international borders. Existing flyway maps are largely qualitative accounts based on band returns and survey data rather than observed movement routes. In this study, we use satellite and GPS telemetry data and dynamic Brownian bridge movement models to build upon existing maps and describe waterfowl space use probabilistically in the Central Asian and East Asian-Australasian Flyways. Results Our approach provided new information on migratory routes that was not easily attainable with existing methods to describe flyways. Utilization distributions from dynamic Brownian bridge movement models identified key staging and stopover sites, migration corridors and general flyway outlines in the Central Asian and East Asian-Australasian Flyways. A map of space use from ruddy shelducks depicted two separate movement corridors within the Central Asian Flyway, likely representing two distinct populations that show relatively strong connectivity between breeding and wintering areas. Bar-headed geese marked at seven locations in the Central Asian Flyway showed heaviest use at several stopover sites in the same general region of high-elevation lakes along the eastern Qinghai-Tibetan Plateau. Our analysis of data from multiple Anatidae species marked at sites throughout Asia highlighted major movement corridors across species and confirmed that the Central Asian and East Asian-Australasian Flyways were spatially distinct. Conclusions The dynamic Brownian bridge movement model improves our understanding of flyways by estimating relative use of regions in the flyway while providing detailed, quantitative information on migration timing and population connectivity including uncertainty between locations. This model effectively quantifies the relative importance of different migration corridors and stopover sites and may help prioritize specific areas in flyways for conservation of waterbird populations.

Movement Ecology↗

2023-2024 Coastal sage scrub and chaparral community monitoring for western San Diego County

Western San Diego County is dominated by shrublands supporting biologically diverse native plant and animal communities. Widespread urbanization has led to regional habitat loss and fragmentation, and many species in these shrubland communities are rare, threatened, or endangered. Large-scale, multiple-species conservation planning has resulted in a regional preserve system that focuses on these shrubland communities. Several large-scale threats are leading to type conversion from shrub-dominated to non-native invasive annual grass-dominated vegetation. To understand the changes that are occurring to native shrublands, we have developed a vegetation monitoring program with several components at multiple spatial scales, focused on quantifying coastal sage scrub (CSS) and chaparral vegetation community characteristics. Several drivers of change associated with type conversion of native shrubland to non-native annual grassland have been identified by previous research including increasing fire frequency, nitrogen deposition from air pollution, and prolonged and intense drought associated with changing climate. Loss of ecological integrity indices have been proposed as useful measures of the threat of degradation and type conversion of shrublands in San Diego County. For this study, ecological integrity is defined as a system’s ability to maintain species’ relationships and functions comparable to natural habitat in the region. Previous studies have identified the percent cover of invasive non-native annual grasses as a proxy for overall ecological degradation (loss of integrity) that is consistent across native taxonomic groups. Increased cover of non-native grass is associated with lower integrity of the shrubland vegetation community as shrub-associated plant and animal species are replaced by species preferring grassy and disturbed habitats. The objectives of this CSS and chaparral vegetation community monitoring plan are to: 1) Determine the distribution, composition, structure, and integrity of CSS and chaparral vegetation communities on conserved lands in western San Diego County, 2) Identify whether these attributes of the vegetation communities are changing over time, and 3) Evaluate relationships of known drivers of change (threats) and environmental factors in association with changes in vegetation community attributes. The CSS and chaparral vegetation community monitoring program is divided into four components: 1) vegetation mapping, 2) GIS/remote sensing office analysis of landscape-scale data, 3) permanent field plots using Unmanned Aerial Systems (UAS) and field data collections, and 4) animal and target species surveys and rapid assessment protocols. The first component, which is not detailed in this vegetation monitoring plan, aims to map vegetation communities every 10-15 years based on a classification developed for western San Diego County. High resolution aerial imagery will be used to update the 2012 vegetation map and expand it across the entire study area. The second component uses remote sensing models to annually track ecological integrity of shrublands across the study area and will include a map of areas of change and areas of stability over several decades. These landscape-scale integrity classifications will be used to analyze ecological processes, threats, and abiotic factors relative to changes to shrubland ecological integrity over time and space. The third component includes field surveys of 100 permanent plots across areas historically mapped as shrublands. Surveys in the 1930s mapped vegetation types using plot data. By using this historical classification map, we included areas that have already type-converted from shrubland to non-native annual grassland. The plots were split between CSS (55 plots) and chaparral (45 plots) and stratified into four geographical eco-subregions to guarantee coverage over small patches of habitat along the heavily developed coast. Surveys will include the collection of UAS imagery at a very high resolution. Species-level identifications will be made from the imagery based on a plant list compiled of all species detected in the plot during a thorough field survey by botanists, combined with geo-referenced samples of plant species locations. In addition, herbaceous cover will be estimated in the field using nine 1-m diameter circles (one per subplot) to obtain ocular estimates of cover for each plant species within the circle frame. Soil samples will be collected and analyzed for important element compositions. These data will be analyzed to evaluate plot-level ecological integrity based on species composition and cover. Repeated monitoring will allow evaluation of changes in vegetation attributes over time with known drivers or threats and other environmental factors. In addition, analyses will focus on indicator species and various measures of biological diversity for the vegetation communities. Finally, animal species and rare plants will be assessed using either taxa-based rapid assessment protocols or specialized species-specific protocols for rarer species. The purpose of these assessments is to document the status, habitat, and threat covariates of specific species and confirm the species composition and diversity of animal taxonomic groups (e.g., pollinators). Diversity and abundance of animal species at vegetation plots will be used to refine measures and thresholds of ecological integrity. Rapid assessment protocols for animal taxonomic groups can include multiple detection methods such as, camera traps, cover boards, and bird point counts. Pollinators will be monitored at plots using a protocol currently being developed in conjunction with but separately from this plan. Target rare plant species will be monitored using the regional Inspect and Manage (IMG) protocol that measures the status of rare plant occurrences and habitat and threat covariates over time. Species-specific animal survey methods will be refined as these species are prioritized for future monitoring. The goal of this monitoring program is to classify CSS and chaparral vegetation community integrity, identify areas of degradation across western San Diego County, and characterize drivers, and environmental factors associated with loss of ecological integrity. A combination of vegetation mapping, landscape-scale remote sensing, and field plots will be used to address all the aspects of our research questions. Data compiled and collected will be available to conservation partners to help inform future management decisions.

California↗

Commentary: A cautionary tale regarding use of the National Land Cover Dataset 1992

Digital land-cover data are among the most popular data sources used in ecological research and natural resource management. However, processes for accurate land-cover classification over large regions are still evolving. We identified inconsistencies in the National Land Cover Dataset 1992, the most current and available representation of land cover for the conterminous United States. We also report means to address these inconsistencies in a bird-habitat model. We used a Geographic Information System (GIS) to position a regular grid (or lattice) over the upper midwestern United States and summarized the proportion of individual land covers in each cell within the lattice. These proportions were then mapped back onto the lattice, and the resultant lattice was compared to satellite paths, state borders, and regional map classification units. We observed mapping inconsistencies at the borders between mapping regions, states, and Thematic Mapper (TM) mapping paths in the upper midwestern United States, particularly related to grass I and-herbaceous, emergent-herbaceous wetland, and small-grain land covers. We attributed these discrepancies to differences in image dates between mapping regions, suboptimal image dates for distinguishing certain land-cover types, lack of suitable ancillary data for improving discrimination for rare land covers, and possibly differences among image interpreters. To overcome these inconsistencies for the purpose of modeling regional populations of birds, we combined grassland-herbaceous and pasture-hay land-cover classes and excluded the use of emergent-herbaceous and small-grain land covers. We recommend that users of digital land-cover data conduct similar assessments for other regions before using these data for habitat evaluation. Further, caution is advised in using these data in the analysis of regional land-cover change because it is not likely that future digital land-cover maps will repeat the same problems, thus resulting in biased estimates of change.

Wildlife Society Bulletin↗

Geodatabase compilation of hydrogeologic, remote sensing, and water-budget-component data for the High Plains aquifer, 2011

The High Plains aquifer underlies almost 112 million acres in the central United States. It is one of the largest aquifers in the Nation in terms of annual groundwater withdrawals and provides drinking water for 2.3 million people. The High Plains aquifer has gained national and international attention as a highly stressed groundwater supply primarily because it has been appreciably depleted in some areas. The U.S. Geological Survey has an active program to monitor the changes in groundwater levels for the High Plains aquifer and has documented substantial water-level changes since predevelopment: the High Plains Groundwater Availability Study is part of a series of regional groundwater availability studies conducted to evaluate the availability and sustainability of major aquifers across the Nation. The goals of the regional groundwater studies are to quantify current groundwater resources in an aquifer system, evaluate how these resources have changed over time, and provide tools to better understand a systems response to future demands and environmental stresses. The purpose of this report is to present selected data developed and synthesized for the High Plains aquifer as part of the High Plains Groundwater Availability Study. The High Plains Groundwater Availability Study includes the development of a water-budget-component analysis for the High Plains completed in 2011 and development of a groundwater-flow model for the northern High Plains aquifer. Both of these tasks require large amounts of data about the High Plains aquifer. Data pertaining to the High Plains aquifer were collected, synthesized, and then organized into digital data containers called geodatabases. There are 8 geodatabases, 1 file geodatabase and 7 personal geodatabases, that have been grouped in three categories: hydrogeologic data, remote sensing data, and water-budget-component data. The hydrogeologic data pertaining to the northern High Plains aquifer is included in three separate geodatabases: (1) base data from a groundwater-flow model; (2) hydrogeology and hydraulic properties data; and (3) groundwater-flow model data to be used as calibration targets. The remote sensing data for this study were developed by the U. S. Geological Survey Earth Resources Observation and Science Center and include historical and predicted land-use/land-cover data and actual evapotranspiration data by using remotely sensed temperature data. The water-budget-component data contains selected raster data from maps in the “Selected Approaches to Estimate Water-Budget Components of the High Plains, 1940 Through 1949 and 2000 Through 2009” report completed in 2011 ( http://pubs.usgs.gov/sir/2011/5183/ ). Federal Geographic Data Committee compliant metadata were created for each spatial and tabular data layer in the geodatabases.

Colorado, Kansas, Nebraska, New Mexico, Oklahoma, ↗

Examining the effect of environmental variability on the viability of endangered Steller sea lions using an integrated population model

Understanding spatio-temporal variability in demography and the influence of environmental conditions offers insight into the factors underlying population dynamics. This is particularly true for species with divergent demographic patterns across large geographic areas. The contrasting abundance trends observed across the range of Steller sea lions (Eumetopias jubatus) have been studied extensively, with research suggesting that the primary drivers of localized population dynamics vary over time and space. We developed a Bayesian integrated population model for the endangered western distinct population segment of Steller sea lions that combines mark-recapture and count data from 2000-2021 to estimate demographic rates, abundance trends, and the effects of environmental variability on population growth. Our results highlight subregional demographic differences, including reduced pup survival in the central Aleutian Islands and reduced yearling survival west of Samalga Pass. Range-wide abundance increased by 1.7% yr-1 (95% credible interval: 0.14; 3.4%) over the study period, with a positive annual growth rate of 3.0% (1.1; 5.1%) yr-1 east of Samalga Pass, a negative growth rate of -2.1% (-4.6; 0.5%) yr-1 west of Samalga Pass, and an overall low probability of local extirpation (<2%) in 100 years even in subregions experiencing continued decline. The effect of environmental variability on population growth varied depending on subpopulation size and vital rates and was strongest in the area of greatest decline. Our model improves upon existing approaches for estimating abundance, accounts for environmental variability within the viability analysis, and can facilitate evaluating the efficacy of conservation actions and progress toward recovery goals.

Alaska↗