USGS Science⌕ Search

SEARCH · USGS Science

Results for “Frontiers in Microbiology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

1,596 records · Page 69Linked to original sources
USGS2025

A new groundwater energy transport model for the MODFLOW hydrologic simulator

Heat transport in the subsurface is an important aspect of research related to the effects of a warming climate on ecological services (i.e., cold-water refugia); the development of geothermal resources for energy banking schemes (i.e., aquifer thermal energy storage [ATES]); and the effects of temperature on other aspects of groundwater quality, such as nutrient cycling. Historically, simulation of heat transport using the MODFLOW groundwater simulator and related codes was performed by scaling the input parameters of a solute-transport model to emulate heat transport. However, that approach required additional pre- and post-processing of input and output and could not account for the variation in effective thermal storage and transport properties during transient, unsaturated flow, for example. True heat-transport capabilities in the context of MODFLOW were first introduced in a variant called USG-Transport. More recently, a new groundwater energy-transport (GWE) model type has been added to MODFLOW 6, the core version of the MODFLOW hydrologic simulator. GWE supports the simulation of heat transport on structured or unstructured grids as well as within and between features of advanced packages that represent streams, lakes, multi-aquifer wells, and the unsaturated zone. GWE is integrated within MODFLOW 6 and is accessible through the FloPy Python package and the MODFLOW 6 application programming interface (API). An example simulation demonstrates conduction between grid cells through both the water and the solid aquifer material, including thermal bleeding from saturated overburden cells into a groundwater flow field.

Groundwater↗
USGS2026

Alternative approaches to dryland reclamation enhance vegetation cover and soil stability at a former uranium mine

Introduction Conventional reclamation methods to recover dryland ecosystems after mineral extraction often have low success. Alternative reclamation techniques may help overcome the many challenges to establishing persistent native vegetation and stable soils. Objectives Compare conventional reclamation approaches that focus primarily on soil stabilization to alternative approaches that may improve native ecosystem restoration at the Kanab North Mine in northern Arizona. Methods In a fully crossed experiment, conventional seed mix (native and non-native species) and seeding methods (drill-seeding) were compared to alternative practices, including a native-only seed mix, connectivity modifiers (ConMods) with hand seeding, and a biocrust inoculation. Restoration metrics like plant establishment, species composition, soil surface cover and stability, biocrust establishment, and near-surface wind-driven sediment were monitored over the first 5 years post-reclamation. Results While all restoration metrics improved with time, compared to traditional methods, ConMods increased total, graminoid, and native plant species cover, and the native-only seed mix increased woody, native, and perennial species cover. Biocrust inoculation increased late-successional biocrust development, but biocrusts only persisted over 5 years in combination with ConMods. Soil stability increased in all treatments, but both ConMods and biocrust inoculation increased stability compared to traditional practices. Conclusion Overall, alternative approaches to reclamation tested here (ConMods, native seed, and biocrust inoculation) were more effective than traditional practices at increasing total plant cover, facilitating biocrust establishment, and promoting soil stability after uranium mine reclamation.

Arizona↗
USGS2024

Projected sea-level rise and high tide flooding at San Juan National Historic Site, Puerto Rico

Introduction National parks and preserves in the South Atlantic-Gulf Region contain valuable coastal habitats such as tidal wetlands and mangrove forests, as well as irreplaceable historic buildings and archeological sites located in low-lying areas. These natural and cultural resources are vulnerable to accelerated sea-level rise and escalating high tide flooding events. Through a Natural Resources Preservation Program-funded project during 2021–23, the U.S. Geological Survey, in collaboration with the National Park Service, estimated the probability of inundation at San Juan National Historic Site, Puerto Rico, and several other parks under various sea-level rise scenarios and contemporary high tide flooding thresholds. The maps produced for this effort can be used to assess potential habitat change and explore how infrastructure and cultural resources within the park may be exposed to future flooding-related hazards.

San Juan National Historic Site↗
USGS1977

Exploratory water well, St. George Island, Florida

A 1,026-foot well was drilled into the Floridan aquifer on St. George Island in search of a supply of water for residential development in 1971. This is the only well on the island on record to have been drilled below 200 feet for water. The well was abandoned; water flowing from the well was saline. It had a specific conductance of 7,500 micromhos per centimeter at 25° Celsius. The specific conductances of samples taken at drilling depths 217-1,026 feet ranged from 3,140 to 39,600, with the maximum value at 470 ft. A composite geophysical and lithologic log of the well shows spontaneous potential, single-point resistance, gamma-ray, neutron, gamma-gamma, and caliper logs. Well-site notes, a written description of cuttings samples, a graph showing the relation of specific conductance of water samples to the depth of the well at time of sampling, and four chemical analyses of the water are included in the report.

Florida↗
USGS2025

Fiber-optic distributed temperature sensing of hydrologic processes—Diverse deployments and new applications by the U.S. Geological Survey

Fiber-optic distributed temperature sensing instruments harness the temperature-dependent properties of glass to measure temperature continuously along optical fibers by using precise pulses of laser light. In the mid-2000s, this technology was refined for environmental monitoring purposes such as snowpack-air exchange, groundwater/surface-water exchange, and lake-water stratification. Fiber-optic distributed temperature sensing has revealed unprecedented details about preferential flow processes; however, the method is labor intensive and requires specific training, resulting in limited use by the broader water community. With the ongoing national implementation of the U.S. Geological Survey Next Generation Water Observing System, there has been renewed interest in harnessing the unique spatiotemporal monitoring capabilities of fiber-optic distributed temperature sensing. This fact sheet briefly describes this technology, highlights uses by the U.S. Geological Survey, and discusses current applications and future opportunities.

Fact Sheet↗
USGS2025

A high-resolution 3-D P-wave velocity structure of the south-central Cascadia subduction zone from wide-angle shore-crossing seismic refraction data

This study addresses a significant gap in understanding the features of the south-central Cascadia subduction zone, a region characterized by complex geologic, tectonic, and seismic transitions both offshore and onshore. Unlike other segments along this margin, this area lacks a 3-D velocity model to delineate its structural and geological features on a fine scale. To address this void, we developed a high-resolution 3-D P-wave velocity model using active source seismic data from ship-borne seismic shots recorded on temporary and permanent onshore seismic stations and ocean-bottom seismometers. Our model shows velocity variations across the region with distinct velocity-depth profiles for the Siletz, Franciscan, and Klamath terranes in the overlying plate. We identified seaward dipping high-velocity static backstops associated with the Siletz and Klamath terranes, situated near the shoreline and further inland, respectively. Regions of reduced crustal velocity are associated with crustal faults. Moreover, there is significant along-strike depth variation in the subducting slab, which is about 4 km deeper near the thick, dense Siletz terrane and becomes shallower near the predominantly less-dense Franciscan terrane. This highlights a sudden tectonic and geologic transition at the southern boundary of the Siletz terrane. Our velocity model also indicates slightly increased hydration, though still minimal, in both the oceanic crust and the upper mantle of the subducting plate compared to other parts of the margin.

British Columbia, California, Oregon, Washington↗
USGS2026

Surface-wave relocation and characterization of the 2024–2025 dyking episode along the Fentale–Dofen segment of the Ethiopian rift

From late-December 2024 to mid-March 2025, a 50-km-long dyke intrusion triggered over 300 earthquakes (magnitude 4 to 5.9) between Fentale and Dofen volcanoes along the Northern Main Ethiopian Rift. Dyke intrusions periodically occur along the Fentale–Dofen magmatic segment and are an expression of ongoing rift extension. Preliminary analyses using interferometric synthetic aperture radar revealed extensive ground deformation (up to 60 cm), which closely matched the temporal and spatial evolution of surface manifestations and earthquake locations from global catalogues. While global catalogues are critical for real-time monitoring, the precision of locations in remote and or sparsely instrumented regions can be low. In this investigation, we present surface-wave relocation results of the dyking episode that began near Fentale volcano in December 2024. We estimate relative locations using differential traveltimes measured from regional-to-teleseismic distance surface-wave observations of earthquakes reported by the U.S. Geological Survey. Relative relocations reduce the initial region of diffuse seismicity to a 50-km-long narrow band bounding the strike of surface manifestations and the zone of maximum surface deformation. We demonstrate the precision of surface-wave relocations over incremental time periods, capturing the progression of dyking from seismic onset through seismic migration and caldera subsidence. Results showcase the utility of surface-wave relocations in the characterization of dyking episodes and provide complementary insights into the current understanding of the Fentale–Dofen volcanic plumbing system.

Geophysical Journal International↗
USGS2026

Future water constraints on United States lithium mining under climate change

Lithium is necessary for low-carbon technologies that combat climate change, but lithium extraction is water-intensive. Changes in temperature and precipitation arising from climate change are altering water distribution, which could further strain supplies for new mines and industry, farms, and households. Here we explored how climate change, water use, and mining siting could impact lithium mining in the United States. We analyzed whether there would be sufficient water available to support the single existing and 22 proposed U.S. lithium mines at mid-century under four socioeconomic-climate scenarios and five climate models. Though dependent on socioeconomic-climate scenario, climate model, and lithium deposit type, available water supply in most subbasins would likely be unable to support new mines’ water demands, or even non-mining water demands from other sectors. Water scarcity could hinder the ability of the United States to produce enough lithium to meet domestic demand thereby necessitating higher imports.

conterminous United States↗
USGS2024

Projected sea-level rise and high tide flooding at Big Cypress National Preserve, Florida

Introduction National parks and preserves in the South Atlantic-Gulf Region contain valuable coastal habitats such as tidal wetlands and mangrove forests, as well as irreplaceable historic buildings and archeological sites located in low-lying areas. These natural and cultural resources are vulnerable to accelerated sea-level rise and escalating high tide flooding events. Through a Natural Resources Preservation Program-funded project during 2021–23, the U.S. Geological Survey, in collaboration with the National Park Service, estimated the probability of inundation at Big Cypress National Preserve, Florida, and several other parks under various sea-level rise scenarios and contemporary high tide flooding thresholds. The maps produced for this effort can be used to assess potential habitat change and explore how infrastructure and cultural resources within the park may be exposed to future flooding-related hazards.

Florida↗
USGS2026

Reconstructing the Quaternary depositional history using geologic mapping and three-dimensional modeling of the subsurface near Fort Morgan, northeastern Colorado

Centered on Fort Morgan, Colorado, this study is intended to build from previous work by adding a three-dimensional (3D) view of the subsurface to better understand the depositional history of Quaternary deposits. A 1:100,000 scale geologic map was made by combining previous geologic maps, regional soil maps, and recent field investigations. In addition to the geologic mapping, drill hole lithologic data from water wells and oil and gas exploration were compiled and lithologic units simplified to best represent the stratigraphy of the Quaternary deposits. From these subsurface data, a 3D subsurface model was constructed, trimmed at the surface by a digital elevation model, and a bedrock surface foundation gridded from drill hole data was added. The surface of the 3D model was then compared visually to the surficial geologic map. Cross sections were constructed from the 3D model and compared to site-specific drilling that was done as part of this project. Finally, the model was examined in detail to reconstruct the depositional history of the subsurface alluvial and eolian units. Alluvial and fluvial drainage basins exposed in the subsurface have a greater areal extent than the present-day narrow drainages. Older eolian sand in the subsurface tends to be interbedded with loess indicating coeval deposition. Holocene sand, both eroded from bedrock exposed at the surface north of the study area and reworked from the South Platte River, buries most of the interbedded older sand and loess.

Colorado↗
USGS2026

The eruptive behavior of distributed volcanism forming low shield edifices—A case study of Sentinel-Arlington volcanic field, U.S.A.

Distributed volcanic fields are present in various tectonic settings worldwide, and their characteristics reflect differing influences from magmatic and tectonic processes. In the southwestern United States alone, there are 37 Quaternary distributed volcanic fields. After the primary period of extensional tectonics in the southern Basin and Range 15–5 million years ago, the Sentinel-Arlington volcanic field developed in southwestern Arizona between 4 and 1 million years ago. The Sentinel-Arlington volcanic field consists primarily of low relief shield volcanoes, a type of distributed volcanism with poorly understood temporal evolution. The Sentinel-Arlington volcanic field is less than 200 kilometers (km) from the Colorado Plateau, Gulf of California, and southern San Andreas Fault system. This work identifies and examines controls on the emplacement of the Sentinel-Arlington volcanic field by documenting shallow and surficial structures as well as eruption characteristics and style through time. The Sentinel-Arlington volcanic field consists of 21 volcanoes with a total of 33 vents over an area of about 770 square kilometers (km 2 ). The prominence of low relief shield volcanoes may be explained by ascent of basaltic magmas through thin Basin and Range crust, without much crustal contamination, and low viscosities common to mafic compositions. Typical eruption characteristics involve the construction of low relief shield volcanoes followed by Strombolian fissure eruptions at the summits or near-summit medial areas that produce scoria lapilli, which may weld to form agglomerate. The total lifetime erupted volume of about 4.3 cubic kilometers (km 3 ) represents an average eruptive flux of approximately 2x10 -3 km 3 per thousand years (k.y.). This erupted volume is low relative to Neogene basaltic intraplate distributed volcanic fields worldwide, which typically range from 10 -3 to 1 km 3 k.y. -1 . Sentinel-Arlington volcanic field eruptions were likely triggered by intermittent rejuvenation of transient magmatic zones that exist in thinned crust. Instantaneous flux from point sources feeding the lava flows is estimated to be on the order of 10 -1 to 10 cubic meters per second.

Arizona↗
USGS2026

Small earthquake moment magnitude and implications for frequency–magnitude scaling of injection induced earthquakes of the Raton Basin

Accurate estimation of earthquake source parameters—such as moment magnitudes, corner frequencies, and stress drops—is essential for improving seismic hazard assessments and understanding earthquake physics. In this study, moment magnitudes ( M W ) are calculated for 31,581 earthquakes associated with wastewater injection in the Raton Basin (located along the border between northern New Mexico and southern Colorado) between 2016 and 2024 using radiative transfer theory to fit coda decay envelopes. Our results show that it is feasible to estimate moment magnitudes down to M W ~1 with coda envelopes from a small local monitoring network. Significant differences were found between M W and local magnitudes ( M L ) for small earthquakes ( M < 3.0). A linear relationship was optimized to convert M L to M W : M W = 0.7 M L + 0.96 and M W = 0.73 M L + 0.99 (for the events reported by the U.S. Geological Survey), which can be applied in future studies of Raton Basin seismicity. We find that b -values calculated employing different methods and using M L are approximately 1.0, while those using M W range from 1.2 to 1.4. A larger estimate of the b -value could influence interpretations of the statistical behavior of earthquakes associated with injection and consequently seismic hazard assessments based on a magnitude–frequency distribution. The potential differences between local versus moment magnitude-based earthquake statistics should be considered in other seismically active regions.

Colorado, New Mexico↗
USGS2026

Investigating the influence of climate and volcanic surface aging on fluvial erosion: A case study of Réunion Island, Indian Ocean

Precipitation is one of the dominant drivers of landscape erosion and evolution; however, the effects of typical rainfall compared with less frequent, high-magnitude precipitation events on erosion remain unclear. Volcanic islands are ideal locations to study such phenomena due to their simple geometries, nontectonic construction, and strong spatiotemporal rainfall gradients. However, spatial variation in surface age, created during their construction, often complicates their degradation histories by introducing temporal changes in erosion rates as drainage networks develop. Réunion Island (western Indian Ocean) presents a clear example of this, with an east–west gradient in both surface age and mean annual precipitation, as well as infrequent cyclones that alter the background rainfall pattern. In this study, we analyze the effects of surface age, average rainfall, and rainfall variability on basin development and fluvial erosion across the island. We calculate basin-averaged values of basin morphology, age, precipitation, river discharge, eroded volumes, and erosion rates, and use these to analyze the dominant drivers of landscape evolution through a series of correlation analyses. Our results indicate a temporal dependence on the influence of precipitation, with young surfaces being dominantly eroded by high-rainfall events and older surfaces eroded by mean annual rainfall patterns. Furthermore, we show that drainage development of shield volcanoes follows similar trends to other volcano types, and suggest that surface permeability and groundwater structure are important controls on runoff-driven erosion on shield volcanoes. These results add new components to the question of how precipitation impacts erosion.

Réunion Island↗
USGS2025

Ungulate migrations of the Western United States, volume 5

Many ungulates migrate between distinct summer and winter ranges to take advantage of spatially and temporally variable food sources and avoid threats such as predators and deep snow. In 2018, the U.S. Department of the Interior established Secretarial Order 3362, which provided Federal support to expand existing research efforts to study ungulate populations and conserve their migrations by enhancing habitat quality for ungulates across the Western United States. In response to the order, the U.S. Geological Survey (USGS) created the Corridor Mapping Team, which is a collaboration among 11 State agencies, regional and Federal partners, and an expanding number of Tribal wildlife agencies. Together, the Corridor Mapping Team maps ungulate migrations throughout the Western United States and publishes them in the USGS “Ungulate Migrations of the Western United States” report series. This report details migrations and seasonal ranges from 36 additional herds and includes 2 herd updates detailed in previous reports. The Corridor Mapping Team has mapped the migrations and seasonal ranges of 218 unique herds for the report series, including this report. The report series serves as a map-based inventory of the ungulate migrations across the Western United States for biologists, managers, policymakers, and conservation practitioners. Building on the previous report volumes in the series, volume 5 additionally describes some of the local and national initiatives that are incorporating the products, tools, and information from this growing USGS report series.

Navajo Nation↗
USGS2026

Statewide surficial geologic map of Nebraska underscores Quaternary landscape evolution from the High Plains to the Central Lowland

Surficial geologic mapping in Nebraska has been conducted primarily at the 1:24,000 scale since the mid-1990s, although there have also been limited efforts to map generalized Quaternary and surficial geology within the state and the region. We compiled and evaluated disparate maps (1:24,000–1:1,000,000) and datasets—including geologic, soil and soil parent material, and geomorphic maps as well as LiDAR derivatives—to produce a single 1:500,000 scale surficial geologic map of Nebraska that is the first of its kind. This new map provides a coarse-scale surficial geologic map that will be incorporated into a nationwide U.S. Geological Survey Quaternary geologic map. It also reflects the variation and uniqueness of physical landscapes in the state, where the Great Plains and Central Lowland physiographic provinces meet, further developing a richer interdisciplinary understanding of regional geomorphology in the heart of North America.

Nebraska↗
USGS2026

Hydrothermal manganese-oxide mineralization of a carbonate ooze, Samoan hotspot region, South Pacific Ocean

Low-temperature hydrothermal manganese oxides occur throughout the global oceans. However, the hydrothermal replacement of a carbonate ooze by manganese oxides is described here for the first time. The 24 samples dredged from three locations around the Territory of American Samoa in the South Pacific Ocean include six samples with remnant carbonate and volcaniclastic sediments, which we refer to as “low Mn,” and 18 samples in which the mineralization is pervasive and has replaced most original sediment, termed “high Mn.” The 18 high-Mn samples exhibit a mean Mn content of 51 wt.%. Higher Li and Mn contents and lower Fe contents in the high-Mn samples indicate a hydrothermal origin and distinguish these samples from hydrogenetic ferromanganese crusts. Mn-oxide layers are up to 90 mm thick, some with columns to 44 mm long and 10 mm wide, the magnitude of which has not been described previously. Samples are composed of birnessite and 10 Å phyllomanganate minerals. Textures of the thickest Mn layers indicate mineralization below the seabed from ascending fluids during multiple hydrothermal pulses. Mineralization took place by complete to partial replacement and cementation of foraminiferal sediments intermixed with volcaniclastic sediments in varying amounts. Our results highlight the production of carbonate sediment-hosted hydrothermal Mn oxides from multiple hydrothermal sources within the Samoan volcanic chain. The potential extensive distribution on the regional scale of this newly described mineralization process and unique element enrichments raise questions about its broader distribution globally and potential importance to hydrothermal processes, element mass balance, and seabed mineral resources.

Geochemistry, Geophysics, Geosystems↗
USGS2024

Constraining mean landslide occurrence rates for non-temporal landslide inventories using high-resolution elevation data

Constraining landslide occurrence rates can help to generate landslide hazard models that predict the spatial and temporal occurrence of landslides. However, most landslide inventories do not include any temporal data due to the difficulties of dating landslide deposits. Here we introduce a method for estimating the mean landslide occurrence rate of deep-seated rotational and translational slides derived solely from high-resolution (≤3 m) elevation data and globally available estimates of the diffusion coefficient for sediment flux. The method applies a linear diffusion model to the roughest landslide deposits until they reach a representative non-landslide roughness distribution. This estimates the time for a landslide deposit to be unrecognizable in high-resolution digital elevation data, which we term the mean lifetime of the landslide. Using the mean lifetime and number of landslides within an area of interest, we can estimate the mean occurrence rate of landslides over that domain. We validate this approach using a comprehensive temporal inventory of landslides in western Oregon created using age-roughness curves that are calibrated with high-resolution elevation data and radiocarbon data. We find good agreement between our diffusion method and the existing age-roughness-derived estimates, producing mean lifetimes of 4500 and 5200 years (4% difference), respectively. Hazard maps produced using the two methodologies generally agree, with the maximum differences in landslide probability reaching 0.1. Due to the relative abundance of high-resolution elevation data compared with age-dated landslides, our method could help constrain landslide occurrence rates in areas previously considered unfeasible.

Oregon↗
USGS2024

Conceptual hydrogeologic framework and groundwater budget near the southeastern part of Puget Sound, Washington

More than 1 million people live within the active model area (AMA) in the southeastern part of the lowlands surrounding Puget Sound, or Puget Lowland, Washington, and groundwater is the source for approximately one-half of their public, domestic, and irrigation water demands. The 887-square-mile AMA, located in King and Pierce Counties, represents the area of analysis for the conceptual hydrogeologic framework and numerical groundwater-flow models within the study area and includes the Puyallup River and Chambers-Clover Creek watersheds. To assess the potential hydrologic and anthropogenic impacts to groundwater and the connected surface-water resources, conceptual and numerical groundwater-flow models of groundwater flow were developed by the U.S. Geological Survey Washington Water Science Center in close cooperation with 18 water-resource agencies and stakeholders. This report presents information used to characterize the groundwater-flow system and the development of a numerical model in the AMA. Included are descriptions of the geology and conceptual hydrogeologic framework, groundwater levels and flow directions, groundwater recharge and discharge, numerical groundwater-flow model construction and results, and model limitations. The study area encompasses the western part of Pierce County and the southwestern part of King County, Washington. The study area extends south to the Nisqually River, southwest to Tanwax Creek, northeast to the Green River, and north through the valley near Auburn and adjacent uplands. It is bounded on the east by foothills of the Cascade Range, and on the northwest by Puget Sound.

Washington↗