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At least 1,243 records · Page 69Linked to original sources

USGS2015

Application of a coupled vegetation competition and groundwater simulation model to study effects of sea level rise and storm surges on coastal vegetation

Global climate change poses challenges to areas such as low-lying coastal zones, where sea level rise (SLR) and storm-surge overwash events can have long-term effects on vegetation and on soil and groundwater salinities, posing risks of habitat loss critical to native species. An early warning system is urgently needed to predict and prepare for the consequences of these climate-related impacts on both the short-term dynamics of salinity in the soil and groundwater and the long-term effects on vegetation. For this purpose, the U.S. Geological Survey’s spatially explicit model of vegetation community dynamics along coastal salinity gradients (MANHAM) is integrated into the USGS groundwater model (SUTRA) to create a coupled hydrology–salinity–vegetation model, MANTRA. In MANTRA, the uptake of water by plants is modeled as a fluid mass sink term. Groundwater salinity, water saturation and vegetation biomass determine the water available for plant transpiration. Formulations and assumptions used in the coupled model are presented. MANTRA is calibrated with salinity data and vegetation pattern for a coastal area of Florida Everglades vulnerable to storm surges. A possible regime shift at that site is investigated by simulating the vegetation responses to climate variability and disturbances, including SLR and storm surges based on empirical information.

Journal of Marine Science and Engineering↗

USGS2006

Fishes associated with North Carolina shelf-edge hardbottoms and initial assessment of a proposed marine protected area

Fish community data are limited from deeper shelf-edge hardbottoms along the southeastern U.S. continental shelf. This lack of data Hampers the design of recently proposed marine protected areas (MPAs) on the outer shelf of the southeastern U.S. During 2001-2004, sampling was conducted (57-25 m) to describe habitats and fish communities within and outside of the North Carolina proposed MPA (p-MPA) using the JOHNSON-SEA-LINK submersible, remotely operated vehicles, otter trawls, and hook and line. Habitats observed included soft substrate or non-hardbottom (NH), a shipwreck ("Snowy Wreck"), low relief hardbottoms (LRH), boulder fields (BF), and high relief ledges (HRL), the latter of which were divided into three mi-crohabitats. Non-metric, multi-dimensional scaling indicated that hardbottom fish assemblages were distinct from NH, and fish assemblages among microhabitats on HRL were different. In total, 152 fish species were documented. Thirty-five species were observed only on NH and 117 were observed or hardbottoms and the Snowy Wreck. Several species of anthiines were the most abundant fishes on most hardbottoms, whereas triglids, synodontids, and Seriola spp. were abundant on NH. Species richness was highest on HRL, and species composition was unique at the Snowy Wreck (238-253 m) and on BF. Future shelf-edge hardbottom research should include more standardized surveys using direct observations. Further, we recommend that the boundaries of the North Carolina p-MPA be redrawn to include more hardbottom habitat. ?? 2006 Rosenstiel School of Marine and Atmospheric Science of the University of Miami.

Bulletin of Marine Science↗

USGS2016

Towards establishing compact imaging spectrometer standards

Remote sensing science is currently undergoing a tremendous expansion in the area of hyperspectral imaging (HSI) technology. Spurred largely by the explosive growth of Unmanned Aerial Vehicles (UAV), sometimes called Unmanned Aircraft Systems (UAS), or drones, HSI capabilities that once required access to one of only a handful of very specialized and expensive sensor systems are now miniaturized and widely available commercially. Small compact imaging spectrometers (CIS) now on the market offer a number of hyperspectral imaging capabilities in terms of spectral range and sampling. The potential uses of HSI/CIS on UAVs/UASs seem limitless. However, the rapid expansion of unmanned aircraft and small hyperspectral sensor capabilities has created a number of questions related to technological, legal, and operational capabilities. Lightweight sensor systems suitable for UAV platforms are being advertised in the trade literature at an ever-expanding rate with no standardization of system performance specifications or terms of reference. To address this issue, both the U.S. Geological Survey and the National Institute of Standards and Technology are eveloping draft standards to meet these issues. This paper presents the outline of a combined USGS/NIST cooperative strategy to develop and test a characterization methodology to meet the needs of a new and expanding UAV/CIS/HSI user community.

International Journal of Experimental Spectroscopi↗

USGS2013

Modeling for the SAFRR Tsunami Scenario-generation, propagation, inundation, and currents in ports and harbors: Chapter D in The SAFRR (Science Application for Risk Reduction) Tsunami Scenario

This U.S. Geological Survey (USGS) Open-File report presents a compilation of tsunami modeling studies for the Science Application for Risk Reduction (SAFRR) tsunami scenario. These modeling studies are based on an earthquake source specified by the SAFRR tsunami source working group (Kirby and others, 2013). The modeling studies in this report are organized into three groups. The first group relates to tsunami generation. The effects that source discretization and horizontal displacement have on tsunami initial conditions are examined in section 1 (Whitmore and others). In section 2 (Ryan and others), dynamic earthquake rupture models are explored in modeling tsunami generation. These models calculate slip distribution and vertical displacement of the seafloor as a result of realistic fault friction, physical properties of rocks surrounding the fault, and dynamic stresses resolved on the fault. The second group of papers relates to tsunami propagation and inundation modeling. Section 3 (Thio) presents a modeling study for the entire California coast that includes runup and inundation modeling where there is significant exposure and estimates of maximum velocity and momentum flux at the shoreline. In section 4 (Borrero and others), modeling of tsunami propagation and high-resolution inundation of critical locations in southern California is performed using the National Oceanic and Atmospheric Administration’s (NOAA) Method of Splitting Tsunami (MOST) model and NOAA’s Community Model Interface for Tsunamis (ComMIT) modeling tool. Adjustments to the inundation line owing to fine-scale structures such as levees are described in section 5 (Wilson). The third group of papers relates to modeling of hydrodynamics in ports and harbors. Section 6 (Nicolsky and Suleimani) presents results of the model used at the Alaska Earthquake Information Center for the Ports of Los Angeles and Long Beach, as well as synthetic time series of the modeled tsunami for other selected locales in southern California. Importantly, section 6 provides a comparison of the effect of including horizontal displacements at the source described in section 1 and differences in bottom friction on wave heights and inundation in the Ports of Los Angeles and Long Beach. Modeling described in section 7 (Lynett and Son) uses a higher order physical model to determine variations of currents during the tsunami and complex flow structures such as jets and eddies. Section 7 also uses sediment transport models to estimate scour and deposition of sediment in ports and harbors—a significant effect that was observed in southern California following the 2011 Tohoku tsunami. Together, all of the sections in this report form the basis for damage, impact, and emergency preparedness aspects of the SAFRR tsunami scenario. Three sections of this report independently calculate wave height and inundation results using the source specified by Kirby and others (2013). Refer to figure 29 in section 3, figure 52 in section 4, and figure 62 in section 6. All of these results are relative to a mean high water (MHW) vertical datum. Slight differences in the results are observed in East Basin of the Port of Los Angeles, Alamitos Bay, and the Seal Beach National Wildlife Refuge. However, given that these three modeling efforts involved different implementations of the source, different numerical wave propagation and runup models, and slight differences in the digital elevation models (DEMs), the similarity among the results is remarkable.

California↗

USGS2019

Data sharing in magnetotellurics

Here, we introduce the first openly available comprehensive database of magnetotelluric (MT) and related electromagnetic data that we developed and matured over the past decade, explain how to access the data, and describe the challenges that had to be overcome to make MT data sharing possible. The database is a helpful tool for MT scientists, and is widely used by the international scientific community in teaching, planning future surveys, and then to leverage the value of new data at the inversion and interpretation stage. It has also turned into a primary resource for researchers in space weather, and for power grid industry. MT impedance, a transfer function that relates geoelectric fields to geomagnetic fields at the Earth’s surface, provides a critical missing component for estimation of geomagnetically induced currents: quasi-direct currents caused by geomagnetic storms that can destroy valuable equipment and cause extended blackouts. We envision that this database will also be useful for researchers in other areas of geophysics, such as seismology, who would like to use real MT data for hands-on learning and joint inversion analysis.

Eos, Earth and Space Science News↗

USGS2016

The automated reference toolset: A soil-geomorphic ecological potential matching algorithm

Ecological inventory and monitoring data need referential context for interpretation. Identification of appropriate reference areas of similar ecological potential for site comparison is demonstrated using a newly developed automated reference toolset (ART). Foundational to identification of reference areas was a soil map of particle size in the control section (PSCS), a theme in US Soil Taxonomy. A 30-m resolution PSCS map of the Colorado Plateau (366,000 km 2 ) was created by interpolating ∼5000 field soil observations using a random forest model and a suite of raster environmental spatial layers representing topography, climate, general ecological community, and satellite imagery ratios. The PSCS map had overall out of bag accuracy of 61.8% (Kappa of 0.54, p < 0.0001), and an independent validation accuracy of 93.2% at a set of 356 field plots along the southern edge of Canyonlands National Park, Utah. The ART process was also tested at these plots, and matched plots with the same ecological sites (ESs) 67% of the time where sites fell within 2-km buffers of each other. These results show that the PSCS and ART have strong application for ecological monitoring and sampling design, as well as assessing impacts of disturbance and land management action using an ecological potential framework. Results also demonstrate that PSCS could be a key mapping layer for the USDA-NRCS provisional ES development initiative.

Soil Science Society of America Journal↗

USGS2012

Coal-tar-based pavement sealcoat and PAHs: implications for the environment, human health, and stormwater management

Coal-tar-based sealcoat products, widely used in the central and eastern U.S. on parking lots, driveways, and even playgrounds, are typically 20−35% coal-tar pitch, a known human carcinogen that contains about 200 polycyclic aromatic hydrocarbon (PAH) compounds. Research continues to identify environmental compartments—including stormwater runoff, lake sediment, soil, house dust, and most recently, air—contaminated by PAHs from coal-tar-based sealcoat and to demonstrate potential risks to biological communities and human health. In many cases, the levels of contamination associated with sealed pavement are striking relative to levels near unsealed pavement: PAH concentrations in air over pavement with freshly applied coal-tar-based sealcoat, for example, were hundreds to thousands of times higher than those in air over unsealed pavement. Even a small amount of sealcoated pavement can be the dominant source of PAHs to sediment in stormwater-retention ponds; proper disposal of such PAH-contaminated sediment can be extremely costly. Several local governments, the District of Columbia, and the State of Washington have banned use of these products, and several national and regional hardware and home-improvement retailers have voluntarily ceased selling them.

Environmental Science & Technology↗

USGS2001

Widespread potential for microbial MTBE degradation in surface-water sediments

Microorganisms indigenous to stream and lake bed sediments, collected from 11 sites throughout the United States, demonstrated significant mineralization of the fuel oxygenate, methyl-tert-butyl ether (MTBE). Mineralization of [U-14C]MTBE to 14CO2 ranged from 15 to 66% over 50 days and did not differ significantly between sediments collected from MTBE contaminated sites and from sites with no history of MTBE exposure. This result suggests that even the microbial communities indigenous to newly contaminated surface water systems will exhibit some innate ability to attenuate MTBE under aerobic conditions. The magnitude of MTBE mineralization was related to the sediment grain size distribution. A pronounced, inverse correlation (p < 0.001; r2 = 0.73) was observed between the final recovery of 14CO2 and the percentage content of silt and clay sized grains (grain diameter < 0.125 mm). The results of this study indicate that the microorganisms that inhabit the bed sediments of streams and lakes can degrade MTBE efficiently and that this capability is widespread in the environment. Thus aerobic bed sediment microbial processes may provide a significant environmental sink for MTBE in surface water systems throughout the United States and may contribute to the reported transience of MTBE in some surface waters.

Environmental Science & Technology↗

USGS2018

Toward salt marsh harvest mouse recovery: A review

The salt marsh harvest mouse (SMHM, Reithrodontomys raviventris ) is an endangered species, endemic to the San Francisco Estuary. Despite being protected for almost half a century and being included in a large number of recovery, restoration, and management plans, significant data gaps hinder conservation and management of the species, a challenge further complicated by developing threats such as climate change. In this review, we present the current state of knowledge; highlight research gaps on habitat requirements and distribution, taxonomic status and genetic structure, physiology, reproduction and demographics, population dynamics, and behavior and community interactions; and present an overview of threats to the species. Our review indicates that substantial data gaps exist; although some aspects of SMHM ecology, such as habitat use, have been addressed extensively, others, such as the effects of environmental contamination, are largely unaddressed. We suggest that conservation and restoration-planning processes consider experimental approaches within restoration designs to address these deficiencies. Continued investment in basic and applied SMHM ecology to collect baseline and long-term data will also be beneficial. Additionally, further coordination among managers and researchers can facilitate more effective responses to uncertainties and emerging threats, especially climate change, which threatens the SMHM and its habitat throughout its range.

San Francisco Estuary and Watershed Science↗

USGS2007

Altered mangrove wetlands as habitat for estuarine nekton: are dredged channels and tidal creeks equivalent?

Hasty decisions are often made regarding the restoration of "altered" habitats, when in fact the ecological value of these habitats may be comparable to natural ones. To assess the "value" of altered mangrove-lined habitats for nekton, we sampled for 1 yr within three Tampa Bay wetlands. Species composition, abundance, and spatial distribution of nekton assemblages in permanent subtidal portions of natural tidal creeks and wetlands altered by construction of mosquito-control ditches and stormwater-drainage ditches were quantified through seasonal seine sampling. Results of repeated-measures analysis of variance and ordination of nekton community data suggested differences in species composition and abundance between natural and altered habitat, though not consistently among the three wetlands. In many cases, mosquito ditches were more similar in assemblage structure to tidal creeks than to stormwater ditches. In general, mosquito ditches and stormwater ditches were the most dissimilar in terms of nekton community structure. These dissimilarities were likely due to differences in design between the two types of ditches. Mosquito ditches tend to fill in over time and are thus more ephemeral features in the landscape. In contrast, stormwater ditches are a more permanent altered habitat that remain open due to periodic flushing from heavy runoff. Results indicate that environmental conditions (e.g., salinity, current velocity, vegetative structure) may provide a more useful indication of potential habitat "value" for nekton than whether the habitat has been altered. The type of ditching is therefore more important than ditching per se when judging the habitat quality of these altered channels for fishes, shrimps and crabs. Planning should entail careful consideration of environmental conditions rather than simply restoring for restoration's sake.

Florida↗

USGS1999

Fishes in mangrove prop-root habitats of northeastern Florida Bay: Distinct assemblages across an estuarine gradient

Seasonal changes in freshwater inflow and other environmental conditions may induce changes in density and species composition of mangrove fishes along estuarine gradients. Fishes within mangrove habitats in a subtropical estuary were sampled monthly from May 1989 to May 1990, using block nets with rotenone and visual censuses. At 18 stations, temperature ranged from 22 to 34°C, depth from 10 to 104cm and underwater visibility from 1 to 13m. Salinity ranged from 0 to 60 upstream, and 35 to 54 mid- and downstream. A total of 573191 individuals (76 species) was observed or collected, with an average density of 6·5 fish m −2 . Engraulidae, Atherinidae, Poeciliidae and Cyprinodontidae numerically dominated the assemblage. Distinct assemblages occurred up-, mid- and downstream and maintained coherent groups in these gradient positions over the seasons. Residents totalled 94·5% of the individuals, estuarine transients comprised 5·1% and occasional marine visitors were less than 0·4%. Densities of resident fishes peaked in winter as temperatures and water levels fell, uncorrelated with changes in salinity. These observations suggest that mangrove habitats may sustain diverse and abundant fish communities dominated by euryhaline residents. Although estuarine transients were consistently rare in upstream sub-basins, downstream were found numerous sub-adults of species occurring as adults on nearby reefs (Lutjanidae, Haemulidae). Thus, reef-associated estuarine transients may be abundant in mangrove habitats having near-marine salinities. Contrary to expectations, mangrove habitats in northeastern Florida bay did not function as a nursery as defined under the nursery-ground paradigm: young-of-the-year juveniles of estuarine transient species did not seek low salinity sub-basins. However, northeastern Florida Bay may not be representative of most mangrove estuaries as the area: (1) is without lunar tides and related circulation; (2) has low and variable amounts of submersed vegetation; and (3) experiences severe hypersaline conditions.

Estuarine, Coastal and Shelf Science↗

USGS2015

Biogeochemical environments of streambed-sediment pore waters with and without arsenic enrichment in a sedimentary rock terrain, New Jersey Piedmont, USA

Release of arsenic (As) from sedimentary rocks has resulted in contamination of groundwater in aquifers of the New Jersey Piedmont Physiographic Province, USA; the contamination also may affect the quality of the region's streamwater to which groundwater discharges. Biogeochemical mechanisms involved in the release process were investigated in the streambeds of Six Mile Run and Pike Run, tributaries to the Millstone River in the Piedmont. At Six Mile Run, streambed pore water and shallow groundwater were low or depleted in oxygen, and contained As at concentrations greater than 20 μg/L. At Pike Run, oxidizing conditions were present in the streambed, and the As concentration in pore water was 2.1 μg/L. The 16S rRNA gene and the As(V) respiratory reductase gene, arrA , were amplified from DNA extracted from streambed pore water at both sites and analyzed, revealing that distinct bacterial communities that corresponded to the redox conditions were present at each site. Anaerobic enrichment cultures were inoculated with pore water from gaining reaches of the streams with acetate and As(V). As(V) was reduced by microbes to As(III) in enrichments with Six Mile Run pore water and groundwater, whereas no reduction occurred in enrichments with Pike Run pore water. Cloning and sequencing of the arrA gene indicated 8 unique operational taxonomic units (OTUs) at Six Mile Run and 11 unique OTUs at Pike Run, which may be representative of the arsenite oxidase gene arxA . Low-oxygen conditions at Six Mile Run have favored microbial As reduction and release, whereas release was inhibited by oxidizing conditions at Pike Run.

New Jersey↗

USGS2022

Elevating human dimensions of amphibian and reptile conservation, a USA perspective

Increasing threats to amphibian and reptile species raise the urgency of their conservation. However, relative to other vertebrate groups at risk, amphibians and reptiles have low and more variable social capital; they are not generally high-priority natural goods and services valued by people. Consequently, relative to other groups such as birds, mammals, and economically important fish, they garner fewer conservation resources. With increasing risks, their situation degrades. We examine five societal sectors with herpetofaunal conservation interests in the United States (local communities, people in defined geographies and jurisdictions, species and threat specialists and advocates, associated researchers, managers, and policy makers) to understand challenges of low and variable social capital for herpetofauna. With current trends of US public values changing from traditionalist consumerism of wildlife to mutualist coexistence philosophies, a refocus of outreach and inreach efforts could help reframe priorities toward species at greatest risk, rather than broad taxonomic biases. Integrated teams of engaged natural resource managers, researchers, and the interested public can help promote species- and issue-based programs to forestall losses, hence programmatically raising social capital. Heightened recognition of the importance of human relationships and herpetofaunal diversity among researchers, managers, policy makers, educators, artists, authors, citizens, and children could provide inertia to reframe conservation program effectiveness at local-to-national scales.

Conservation Science and Practice↗

USGS2017

Plant diversity increases with the strength of negative density dependence at the global scale

Theory predicts that higher biodiversity in the tropics is maintained by specialized interactions among plants and their natural enemies that result in conspecific negative density dependence (CNDD). By using more than 3000 species and nearly 2.4 million trees across 24 forest plots worldwide, we show that global patterns in tree species diversity reflect not only stronger CNDD at tropical versus temperate latitudes but also a latitudinal shift in the relationship between CNDD and species abundance. CNDD was stronger for rare species at tropical versus temperate latitudes, potentially causing the persistence of greater numbers of rare species in the tropics. Our study reveals fundamental differences in the nature of local-scale biotic interactions that contribute to the maintenance of species diversity across temperate and tropical communities.

Science↗

USGS2009

Coastal sensitivity to sea level rise— A focus on the Mid-Atlantic Region

This Synthesis and Assessment Product (SAP), developed as part of the U.S. Climate Change Science Program, examines potential effects of sea-level rise from climate change during the twenty-first century, with a focus on the mid-Atlantic coast of the United States. Using scientific literature and policy-related documents, the SAP describes the physical environments; potential changes to coastal environments, wetlands, and vulnerable species; societal impacts and implications of sea-level rise; decisions that may be sensitive to sea-level rise; opportunities for adaptation; and institutional barriers to adaptation. The SAP also outlines the policy context in the mid-Atlantic region and describes the implications of sea-level rise impacts for other regions of the United States. Finally, this SAP discusses ways natural and social science research can improve understanding and prediction of potential impacts to aid planning and decision making. Projections of sea-level rise for the twenty-first century vary widely, ranging from several centimeters to more than a meter. Rising sea level can inundate low areas and increase flooding, coastal erosion, wetland loss, and saltwater intrusion into estuaries and freshwater aquifers. Existing elevation data for the mid-Atlantic United States do not provide the degree of confidence needed for local decision making. Systematic nationwide collection of high-resolution elevation data would improve the ability to conduct detailed assessments in support of planning. The coastal zone is dynamic and the response of coastal areas to sea-level rise is more complex than simple inundation. Much of the United States consists of coastal environments and landforms such as barrier islands and wetlands that will respond to sea-level rise by changing shape, size, or position. The combined effects of sea-level rise and other climate change factors such as storms may cause rapid and irreversible coastal change. All these changes will affect coastal habitats and species. Increasing population and development in coastal areas also affects the ability of natural ecosystems to adjust to sea-level rise. Coastal communities and property owners have responded to coastal hazards by erecting shore protection structures, elevating land and buildings, or relocating inland. Accelerated sea-level rise would increase the costs and environmental impacts of these responses. Shoreline armoring can eliminate the land along the shore to which the public has access; beach nourishment projects often increase access to the shore. Preparing for sea-level rise can be justified in many cases, because the cost of preparing now is small compared to the cost of reacting later. Examples include wetland protection, flood insurance, longlived infrastructure, and coastal land-use planning. Nevertheless, preparing for sea-level rise has been the exception rather than the rule. Most coastal institutions were based on the implicit assumption that sea level and shorelines are stable. Efforts to plan for sea-level rise can be thwarted by several institutional biases, including government policies that encourage coastal development, flood insurance maps that do not consider sea-level rise, federal policies that prefer shoreline armoring over soft shore protection, and lack of plans delineating which areas would be protected or not as sea level rises. The prospect of accelerated sea-level rise and increased vulnerability in coastal regions underscores the immediate need for improving our scientific understanding of and ability to predict the effects of sea-level rise on natural systems and society. These actions, combined with development of decision support tools for taking adaptive actions and an effective public education program, can lessen the economic and environmental impacts of sea-level rise.

Report↗

USGS2022

Developing common protocols to measure tundra herbivory across spatial scales

Understanding and predicting large-scale ecological responses to global environmental change requires comparative studies across geographic scales with coordinated efforts and standardized methodologies. We designed, applied and assessed standardized protocols to measure tundra herbivory at three spatial scales: plot, site (habitat), and study area (landscape). The plot and site-level protocols were tested in the field during summers 2014-2015 at eleven sites, nine of them comprising warming experimental plots included in the International Tundra Experiment (ITEX). The study area protocols were assessed during 2014-2018 at 24 study areas across the Arctic. Our protocols provide comparable and easy-to-implement methods for assessing the intensity of invertebrate herbivory within ITEX plots and for characterizing vertebrate herbivore communities at larger spatial scales. We discuss methodological constraints and make recommendations for how these protocols can be used and how sampling effort can be optimized to obtain comparable estimates of herbivory, both at ITEX sites and at large landscape scales. The application of these protocols across the tundra biome will allow characterizing and comparing herbivore communities across tundra sites and at ecologically relevant spatial scales, providing an important step towards a better understanding of tundra ecosystem responses to large-scale environmental change.

Alaska↗

USGS2023

Integrated science strategy for assessing and monitoring water availability and migratory birds for terminal lakes across the Great Basin, United States

Executive Summary In 2022, the U.S. Geological Survey (USGS) established the Saline Lake Ecosystems Integrated Water Availability Assessment (IWAAs) to monitor and assess the hydrology of terminal lakes in the Great Basin and the migratory birds and other wildlife dependent on those habitats. Scientists from across the USGS (with specialties in water quantity, water quality, limnology, avian biology, data science, landscape ecology, and science communication) formed the Saline Lake Ecosystems IWAAs Team. The team has developed this regional strategic science plan to guide data collection and assessment activities at terminal lakes in the Great Basin. The U.S. Congress requested the USGS to establish the Saline Lake Ecosystems IWAAs in response to historically low water levels at terminal lakes and associated wetlands across the Great Basin. Not all Great Basin terminal lakes have high salinity; however, all terminal lakes occur in endorheic, closed, basins with no surface-water outflow. Low lake levels across the Great Basin are the result of increased water use for agriculture and municipalities, drought conditions, and a warming climate. Great Basin terminal lake water extents have decreased by as much as 90 percent over the last 150 years, and terminal lake wetlands have decreased in area by as much as 47 percent since 1984. Lake elevations and wetland areas are primarily supported by freshwater inputs from snowmelt feeding upgradient rivers, streams, and springs. These freshwater inputs have been severely reduced because of continued and increased surface-water diversions and surface-water capture through groundwater pumping for agriculture, mining, and public supply as well as unprecedented drought conditions and warming temperatures related to climate change. Water quality, specifically salinity, is highly variable for terminal lakes of the Great Basin, and this variability is a result of the balance between freshwater inflow and evaporation. Variability of salinity at each of the terminal lakes can be affected by lake morphology, hydrogeologic features of the basin, annual variability in weather patterns, and changes in upgradient water use. Hypersaline terminal lakes provide abundant food resources such as brine shrimp and brine flies that support nesting and migrating birds. The density and composition of invertebrates are closely tied to lake salinity. Increased salinity can exceed the tolerance of invertebrates, severely limiting their biomass. In contrast, decreased salinity can lead to altered invertebrate community composition, reducing the abundance of optimal avian prey resources. Great Basin terminal lake ecosystems, including open-water and adjacent aquatic and terrestrial environments, provide resources necessary to sustain many animal populations throughout the year. Although a variety of taxa use terminal lakes, these ecosystems are of acute importance for the millions of migratory waterbirds (for example, shorebirds, wading birds, and waterfowl) dependent on the network of terminal lakes and their associated wetlands. Migratory birds transiting the Pacific and Central Flyways use Great Basin terminal lake ecosystems throughout the year to feed, nest, and transit between wintering and breeding ranges. As such, successful conservation of birds and their habitats requires coordinated management of water and habitats across the Great Basin network of terminal lakes and wetlands. The linkages between water availability and ecosystem vulnerability of terminal lakes in the Great Basin are not well understood. The vulnerability of terminal lakes is related to the factors driving change and adaptive capacity of the lake ecosystem. Saline lake ecosystems are vulnerable when changes in water quantity affect ecosystem function. Water quantity affects salinity, which affects food webs and habitat; these linkages can be investigated with water-quality and food web monitoring. Water quantity also affects inundated habitat, which can be quantified through remote sensing. It is necessary to quantify hydroclimatic and water use controls on water availability to terminal lakes to assess the response of the ecosystems. Remotely sensed data can provide a broad-scale and long-term synoptic view of terminal lake hydrologic characteristics, but ground observations are required to interpret changes in water quality and ecological functions. Some terminal lake basins have ongoing monitoring and modeling efforts within the Great Basin (for example, Great Salt Lake, Carson River Basin), yet most monitoring locations are hydrologically upgradient and too far away from lake inflows to provide an accurate assessment of hydrological trends for the lake ecosystems. Other terminal lakes have no long-term hydrological monitoring in their respective watersheds (for example, Lake Abert). Ecological data collection in the Great Basin is also insufficient to understand how many birds exist on the landscape, how birds use the mosaic of terminal-lake habitats as an interconnected system, and how Great Basin terminal lakes are linked to the larger continental system of the Pacific and Central Flyways. Across agencies and organizations, tracking bird movement, abundance, and diversity is inconsistent, with some lakes having once- or twice-a-year bird survey efforts and a few locations having more intensive ecological data-gathering efforts (for example, Great Salt Lake, Lake Abert). Bridging hydrological and ecological information gaps will improve understanding of the trends in water supply and water quality, habitat availability and usage, and impacts on vulnerable waterbird species, all of which would be used by managers in coordinated conservation of this unique network of terminal-lake habitats. The terminal lakes of the Great Basin are part of the Basin and Range physiographic province that extends from the Colorado Plateau on the east to the Sierra Nevada on the west, and from the Snake River Plain on the north to the Garlock fault and the Mojave block on the south. The Great Basin is larger than 650,000 square kilometers and encompasses most of the State of Nevada but also extends to western Utah, eastern California, southeastern Idaho, southwestern Wyoming, and southeastern Oregon. The climate is arid to semiarid with a hydrologic regime that is snowmelt dominated, providing as much as 75 percent of total annual runoff for the region. Terminal lakes of the Great Basin occupy the lowest areas of closed (endorheic) drainage basins, such that lake levels and water quality respond rapidly to surface-water inflow. Terminal lakes provide local and regional economic value to the States in the Great Basin, including mineral extraction, aquaculture, public works, and recreational uses. As an example, assessments of Great Salt Lake’s ecological health and economic impact find hemispheric importance for the former and regional importance for the latter. Great Salt Lake creates about 7,000 jobs and $2 billion of economic output per year, most of which would be lost with further declines in lake level. The objectives of this Science Strategy are threefold: (1) to identify how changing water availability affects the quality, diversity, and abundance of habitats supporting continental waterbird populations; (2) to highlight the scientific monitoring and assessment needs of Great Basin terminal lakes; and (3) to support coordinated management and conservation actions to benefit those ecosystems, migratory birds, and other wildlife. There are long-term hydrological, ecological, and societal challenges associated with terminal lakes ecosystems in the Great Basin. This Science Strategy benefits partners by providing a conceptual model, nested at different spatial extents, that identifies key scientific information needs to inform coordinated implementation of management and conservation plans within and among hydrologic basins to address these complex challenges.

California, Idaho, Nevada, Oregon, Utah, Wyoming↗

USGS2021

The AEMON-J “Hacking Limnology” workshop series & virtual summit: Incorporating data science and open science in aquatic research

Following the 2020 “Virtual Summit: Incorporating Data Science and Open Science in Aquatic Research” (DSOS; Meyer and Zwart 2020 ), a grassroots group of scientists convened the 2nd Virtual DSOS Summit on 22–23 July 2021. DSOS combined forces with the Aquatic Ecosystem MOdeling Network - Junior (AEMON-J; https://github.com/aemon-j) to host a 4-d “Hacking Limnology” Workshop Series prior to the summit (13–16 July 2021). The aim was to focus more deeply on skill development and networking among early career researchers (ECRs), both of which are key to growing a workforce of data-intensive aquatic scientists (López Moreira M et al. in press; Meyer et al. 2021 a ). To support ECRs further, we hosted a virtual job board, where participants could note if they were either looking for employment or hiring for a position. Like the 2020 summit, there was high enthusiasm for both the summit and the workshops. In total, 686 people from over 50 countries registered for the AEMON-J Workshop Series and the DSOS Summit. Countries with the highest number of registrants included the United States (41%), Nigeria (20%), Canada (6%), Brazil (6%), and Germany (5%) (Fig. 1). To increase accessibility, there were no registration costs for the workshops and summit, and we centralized introductory training materials, coding scripts, and presentation recordings in one community website (https://aquaticdatasciopensci.github.io/; Fig. 2), which we hope will continue to support the AEMON-J and DSOS communities over time.

Limnology and Oceanography Bulletin↗