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At least 1,243 records · Page 69Linked to original sources
USGS1985

Nonpoint-source discharges and water quality of the Elk Creek basin, west-central Wisconsin

The Elk Creek basin in west-central Wisconsin was studied during the 1980 water year to define the water quality in relation to streamflow. Agricultural nonpoint-source discharges were suspected of contributing significantly to degraded water quality. Two water quality and streamflow gaging stations were established--one on Elk Creek near Independence and the other on Bruce Valley Creek near Pleasantville. Streamflow for the 1980 water year was about 28% greater than average, and precipitation was about 36% greater than average. At Elk Creek, base flow was about 68% of the total stream discharge and, at Bruce Valley Creek, base flow was about 56% of the total stream discharge. Streamflow at Elk Creek during the study ranged from 43 to 1,020 cu ft/sec; Bruce Valley Creek discharges ranged from 2.8 to 306 cu ft/sec. The low flow discharges are significantly greater than the 2-year, 7-day low flow, whereas the peak discharges were between a 2-year and a 5-year flood recurrence interval. Suspended-sediment yields were greatest at Bruce Valley Creek, and was 215 ton/sq mi/yr compared with 184 ton/sq mi/yr for Elk Creek. Double mass-accumulation curves, however, indicated that loading rates were similar for both stations. Suspended sediment and nutrient yields were slightly above the long-term average. Total phosphorus , ammonia nitrogen, and organic nitrogen yields also were highest at Bruce Valley Creek. Phosphorus yields at Bruce Valley Creek were 1,6000 lb/sq mi/yr compared with 1,350 lb/sq mi/yr at Elk Creek. Because base flow was a greater percentage of total discharge, nitrite plus nitrate nitrogen yields and loads were highest at Elk Creek. All phosphorus concentrations at Bruce Valley and Elk Creeks exceeded levels recommended by EPA to prevent the formation of biological nuisance growths. Only one sample, collected on March 18, 1980, at Bruce Valley Creek may have exceeded the Wisconsin Department of Natural Resources criterion of toxic levels for un-ionized ammonia (0.04 mg/L). No samples from Elk Creek extended the criteria. (

Wisconsin↗
USGS1997

Water-quality assessment of the Ozark Plateaus study unit, Arkansas, Kansas, Missouri, and Oklahoma: Organic compounds in surface water, bed sediment, and biological tissue, 1992-95

Organic-compound samples, including pesticides and semi-volatiles, were collected from 1992-95 at 43 surface-water and 27 bed-sediment and biological-tissue sampling sites within the Ozark Plateaus National Water-Quality Assessment Program study unit. Most surface-water, bed-sediment, and biological-tissue sites have drainage basins predominantly in the Springfield and Salem Plateaus. At most surface-water sampling sites, one to three pesticide samples were collected in the spring and early summer of 1994 and 1995; two sites had additional samples collected either weekly, biweekly, or monthly from February 1994 through December 1994. At most bed-sediment and biological-tissue sampling sites, a single organic-compounds sample was collected. Agricultural pesticide use was approximately 4.9 million pounds of active ingredients per year from 1987-91 in the study unit and was generally greatest in the Springfield and Salem Plateaus pasturelands and in the Osage Plains and Mississippi Alluvial Plain cropland areas. The most frequently applied pesticide in the study unit was 2,4-D. Atrazine was the second most frequently applied pesticide. Corn, pasture, rice, sorghum, and soybeans received approximately 85 percent of the pesticides applied within the study unit. The highest pesticide application rate occurred on these crops in the Mississippi Alluvial and Osage Plains. Pastureland was the crop type that received the greatest amount of pesticides in 53 of the 96 counties in the study unit. The most commonly detected herbicide (63 samples) in surface water was atrazine. Five other pesticides--desethylatrazine, tebuthiuron, prometon, metolachlor, and simazine--were detected in 15 or more samples. The most commonly detected insecticide (13 samples) was p,p'-DDE. Two other insecticides, diazinon and cis-permethrin, were detected in seven or more samples. Pesticides were detected at 39 surface-water sites; samples collected at Yocum Creek near Oak Grove, Ark. had the most pesticide detections (13). Seventeen other sites had samples with six or more pesticide detections. Analysis of pesticide data collected at surface-water sites indicates that the largest variety of different pesticides detected (18) was in small, agricultural drainage basins; the largest percentage of detections of a single pesticide (about 80) was in medium, agricultural basins. Pesticide concentrations were small, and in most cases, at or near the detection limit. Maximum concentrations ranged from 0.001 to 0.007 micrograms per liter (mg/L) at small, forest sites; 0.001 to 0.029 mg/L at medium, forest sites; 0.001 to 0.079 mg/L at small, agricultural sites; and 0.003 to 0.29 mg/L at medium, agricultural sites. Pesticides were detected significantly more often in medium, agricultural basins in the Springfield Plateau. The most commonly detected (13 samples) organic compound in bed sediment, in concentrations noticeably above background levels, was 2,6-dimethylnaphthalene; the maximum concentration of 2,6-dimethylnaphthalene was 130 micrograms per kilogram. Seventeen or more compounds were detected in bed-sediment samples collected at three sites. Four compounds were detected in biological-tissue samples: p,p'-DDT in Corbicula fluminea (Asiatic clam) tissue collected at the Osage River near St. Thomas, Mo. and cis-chlordane, trans-chlordane, and trans-nonachlor in C. fluminea tissue collected at the James River near Boaz, Mo. Organic compounds collected at surface-water, bed-sediment, or biological-tissue sampling sites were not detected in concentrations that exceeded any health criteria or standards. Based on this information, organic compounds do not pose any widespread or persistent problems in the study unit.

Arkansas, Kansas, Missouri, Oklahoma↗
USGS2006

Evidence of Lake Trout reproduction at Lake Michigan's mid-lake reef complex

The Mid-Lake Reef Complex (MLRC), a large area of deep (> 40 m) reefs, was a major site where indigenous lake trout ( Salvelinus namaycush ) in Lake Michigan aggregated during spawning. As part of an effort to restore Lake Michigan's lake trout, which were extirpated in the 1950s, yearling lake trout have been released over the MLRC since the mid-1980s and fall gill net censuses began to show large numbers of lake trout in spawning condition beginning about 1999. We report the first evidence of viable egg deposition and successful lake trout fry production at these deep reefs. Because the area's existing bathymetry and habitat were too poorly known for a priori selection of sampling sites, we used hydroacoustics to locate concentrations of large fish in the fall; fish were congregating around slopes and ridges. Subsequent observations via unmanned submersible confirmed the large fish to be lake trout. Our technological objectives were driven by biological objectives of locating where lake trout spawn, where lake trout fry were produced, and what fishes ate lake trout eggs and fry. The unmanned submersibles were equipped with a suction sampler and electroshocker to sample eggs deposited on the reef, draw out and occasionally catch emergent fry, and collect egg predators (slimy sculpin Cottus cognatus ). We observed slimy sculpin to eat unusually high numbers of lake trout eggs. Our qualitative approaches are a first step toward quantitative assessments of the importance of lake trout spawning on the MLRC.

Journal of Great Lakes Research↗
USGS2021

Science needs of southeastern grassland species of conservation concern: A framework for species status assessments

The unglaciated southeastern United States is a biodiversity hotspot, with a disproportionate amount of this biodiversity concentrated in grasslands. Like most hotspots, the Southeast is also threatened by human activities, with the total reduction of southeastern grasslands estimated as 90 percent (upwards to 100 percent for some types) and with many threats escalating today. This report summarizes the results of a multistakeholder workshop organized by the Southeastern Grasslands Initiative and the U.S. Geological Survey, held in January 2020 to provide a scientific needs assessment to help inform the Species Status Assessment (SSA) process under the U.S. Endangered Species Act, with a focus on grassland species and communities of conservation concern in the southeastern United States. This report reviews the ecology of southeastern grasslands, including influences on their origin, maintenance, and high species richness and endemism; presents findings from the workshop; and discusses science questions, hypotheses, and possibilities for future research projects to help fill key knowledge gaps. Participants in the January 2020 workshop, representing diverse expertise in various topics in southeastern grassland ecology, were tasked with identifying major threats to grassland species in the Southeast as well as potential ways to make the SSA process more efficient and effective. An underlying assumption and starting place for workshop discussion was that an ecosystem-based approach to the SSA process is more cost-efficient than a species-by-species approach, in large part because many species with similar biological requirements can be addressed by the same actions. Nevertheless, one partner in this effort, the U.S. Fish and Wildlife Service, does require specific attention be given to taxa that have been petitioned for Federal listing, though as often as possible these taxa are considered alongside a larger group of priority taxa with an ecosystem approach. For group discussions, workshop participants followed a modified “World Café” method, a structured conversational approach for knowledge sharing. Group discussions focused on five categories of threats to grassland communities and species: (1) habitat loss, fragmentation, and disruption of functional population connectivity; (2) climate change, especially changes in temperature and precipitation, including intensity and seasonality, and impacts on soil moisture, groundwater levels, and other ecosystem parameters; (3) changes to disturbance regimes, as influenced by climate and land-use change, extinctions, and human attitudes and behaviors; (4) invasive species (not limited to nonnative species); and (5) localized or subregional impacts such as sea-level rise. In addition to group discussions, workshop participants—as well as other grassland experts who were unable to attend the workshop—completed a preworkshop survey concerning challenges and opportunities for grassland conservation. Findings reported here under each of these topics represent ideas, problems, hypotheses, and questions identified by a diverse community of grassland managers and researchers which may be addressed by future research and monitoring in southeastern grassland ecosystems to help guide science-based conservation of grassland-dependent species.

Alabama, Arkansas, Florida, Georgia, Kentucky, Lou↗
USGS2015

Integrating climate change into northeast and midwest State Wildlife Action Plans

The Department of Interior Northeast Climate Science Center (NE CSC) conducts research that responds to the regional natural resource management community’s needs to anticipate, monitor, and adapt to climate change. The NE CSC is supported by a consortium of partners that includes the University of Massachusetts Amherst, College of Menominee Nation, Columbia University, Marine Biological Laboratory, University of Minnesota, University of Missouri Columbia, and University of Wisconsin. The NE CSC also engages and collaborates with a diversity of other federal, state, academic, tribal, and non-governmental organizations (NGOs) to conduct collaborative, stakeholder-driven, and climate-focused work. The State Wildlife Action Plans (SWAPs) are revised every 10 years; states are currently working towards a target deadline of October 2015. SWAP coordinators have been challenged to incorporate climate change impacts and species responses into their current revisions. This synthesis is intended to inform the science going into Northeast and Midwest SWAPs across the 22 NE CSC states ranging from Maine to Virginia, and Minnesota and Missouri in the eastern United States. It is anticipated that this synthesis will help guide SWAP authors in writing specific sections, help revise and finalize existing sections, or be incorporated as an appendix or addendum. The purpose of this NE CSC-led cooperative report is to provide a synthesis of what is known and what is uncertain about climate change and its impacts across the NE CSC region, with a particular focus on the responses and vulnerabilities of Regional Species of Greatest Conservation Need (RSGCN) and the habitats they depend on. Another goal is to describe a range of climate change adaptation approaches, processes, tools, and potential partnerships that are available to State natural resource managers across the Northeast and Midwest regions of the United States. Through illustrative case studies submitted by the NE CSC and partners, we demonstrate climate change adaptation efforts being explored and implemented across local and large-landscape scales. This document is divided into four sections and addresses the following climate and management relevant questions: Climate Change in the Northeast and Midwest United States: How is the climate changing and projected to change across the Northeast and Midwest regions of the United States? Northeast and Midwest regional species and habitats at greatest risk and most vulnerable to climate impacts: What are the relative vulnerabilities of fish and wildlife species and their habitats to climate change in the Northeast and Midwest? Biological responses to climate impacts with a focus on Northeast and Midwest Regional Species of Greatest Conservation Need (RSGCN): How are threatened fish and wildlife likely to respond or adapt to climate change in the Northeast and Midwest? Scale-appropriate adaptation strategies and actions in the Northeast and Midwest United States: What approaches, strategies, and actions could be taken to sustain fish, wildlife and their habitats in the short and long term across the Northeast and Midwest? The outline and content for this document were developed with input from State Coordinators, members of the Northeast Association of Fish and Wildlife Agencies and Midwest Association of Fish and Wildlife Agencies, DOI Northeast Climate Science Center affiliated researchers, and other partners including the Landscape Conservation Cooperatives, the Northern Institute of Applied Climate Science, the Wildlife Conservation Society, and The Nature Conservancy. Terwilliger Consulting, Inc., was especially instrumental in helping connect and coordinate the authors of this report with State representatives through conference calls and email surveys to develop the most needed and effective information for current SWAP revisions. On a final note, the SWAPs are living documents that can be added to and evolve on timescales beyond the 10-year revision cycle. The development of this report was timed such that SWAP coordinators and writers would have sufficient time to implement this input before their October 2015 deadline. However, this document is also meant to serve as a starting point for coordinated and collaborative climate science and adaptation across the region; the NE CSC 5 endeavors to continue to provide actionable science during the coming years in collaboration with its diverse federal, state, NGO, and academic partners.

Connecticut, Delaware, Iowa, Illinois, Indiana, Ke↗
USGS1998

Water quality, hydrology, and invertebrate communities of three remnant wetlands in Missouri, 1995-97

This report presents the results of a study conducted by the U.S. Geological Survey in cooperation with the Missouri Department of Natural Resources from December 1995 through May 1997 to describe the water quality, hydrologic, and invertebrate characteristics of three remnant wetlands. These data may be used to help develop selected water-quality standards for wetlands in Missouri. Wetlands monitored in this study include Spile Lake, Vernon County; Little Bean Marsh, Platte County; and Forker Oxbow, Linn County, Missouri. Extremes in physicochemical properties in these wetlands were greatly affected by thermal stratification, hydrologic fluctuations, biological activity, and ice formation. The wetlands had dissolved-oxygen concentrations below the 5-milligrams-per-liter State water-quality standard from 40 to 60 percent of a selected 1-year period, corresponding to periods of thermal stratification. Hydrologic fluctuations were common as the water-surface elevation changes in these systems ranged up to 12 feet during the course of the study. Photosynthesis and respiration are likely causes of diurnal fluctuations in pH and dissolved oxygen throughout the study period, but particularly in the summer months. Periods of ice formation were short lived in the wetlands, but corresponded with maximum values of specific conductance and dissolved oxygen in all three systems. Analyses of invertebrate results using the Jaccard Coefficient of Community Similarity indicated mixed results. Woody snag sample results showed little similarities between sites, while sweep net sample results indicated similarities existed. Most of the families detected at these sites are considered organic tolerant as indicated by the Hilsenhoff Biotic Index. Analysis of the dominant taxon indicates that one or two invertebrate families that are tolerant to organic enrichment generally dominate the wetlands. The hydrologic, water quality, and invertebrate information analyzed in this study indicate that while there are similarities among wetlands, these are unique systems. The statistical comparisons between water-quality constituents in wetlands and streams indicate dissimilarities are common. Including the presence of thermal stratification in these wetlands, the exclusions and modifications in State standards that are applied to lakes and reservoirs also may be applicable.

Missouri↗
USGS2021

Detecting subtle change from dense landsat time series: Case studies of mountain pine beetle and spruce beetle disturbance

In contrast to abrupt changes caused by land cover conversion, subtle changes driven by a shift in the condition, structure, or other biological attributes of land often lead to minimal and slower alterations of the terrestrial surface. Accurate mapping and monitoring of subtle change are crucial for an early warning of long-term gradual change that may eventually result in land cover conversion. Freely accessible moderate-resolution datasets such as the Landsat archive have great potential to characterize subtle change by capturing low-magnitude spectral changes in long-term observations. However, past studies have reported limited success in accurately extracting subtle changes from satellite-based time series analysis. In this study, we introduce a supervised framework named ‘PIDS’ to detect subtle forest disturbance from a comprehensive Landsat data archive by leveraging disturbance-based calibration sites. PIDS consists of four components: (1) Parameter optimization; (2) Index selection; (3) Dynamic stratified monitoring; and (4) Spatial consideration. PIDS was applied to map the early stage of bark beetle infestations (i.e., a lower per-pixel fraction of trees cover that show visual signs of infestation), which are a typical example of subtle change in conifer forests. Landsat Analysis Ready Data were used as the time series inputs for mapping mountain pine beetle and spruce beetle disturbance between 2001 and 2019 in Colorado, USA. PIDS-detection map assessment showed that the overall performance of PIDS (namely ‘F1 score’) was 0.86 for mountain pine beetle and 0.73 for spruce beetle, making a substantial improvement (> 0.3) compared to other approaches/products including COntinuous monitoring of Land Disturbance, LandTrendr, and the National Land Cover Database forest disturbance product. A sub-pixel analysis of tree canopy mortality percentage was performed by linking classified high-resolution (0.3- and 1-m) aerial imagery and 30-m PIDS-detection maps. Results show that PIDS typically detects mountain pine beetle infestation when ≥56% of a Landsat pixel is occupied by red-stage canopy mortality (one year after initial infestation), and spruce beetle infestation when ≥55% is occupied by gray-stage mortality (two years after initial infestation). This study addresses an important methodological goal pertinent to the utility of event-based reference samples for detecting subtle forest change, which could be potentially applied to other types of subtle land change.

Colorado↗
USGS2007

Factors affecting the reproduction, recruitment, habitat, and population dynamics of pallid sturgeon and shovelnose sturgeon in the Missouri River

For more than a hundred years, human activities have modified the natural forces that control the Missouri River and its native fish fauna. While the ecological effects of regulation and channel engineering are understood in general, the current understanding is not sufficient to guide river restoration and management. The U.S. Geological Survey (USGS) is in the third year of a multiagency research effort to determine the ecological requirements for reproduction and survival of the endangered pallid sturgeon (Scaphirhynchus albus) and shovelnose sturgeon (Scaphirhynchus platorhynchus) in the Missouri River. The multidisciplinary research strategy includes components of behavior, physiology, habitat use, habitat availability, and population modeling of all life stages. Shovelnose sturgeon are used to design the strategy because they are closely related to the pallid sturgeon and are often used as a surrogate species to develop new research tools or to examine the effects of management actions or environmental variables on sturgeon biology and habitat use. During fiscal years 2005 and 2006, the U.S. Army Corps of Engineers (USACE) provided funds to USGS for tasks associated with the Comprehensive Sturgeon Research Program (CSRP) and for tasks associated with evaluation of the Sturgeon Response to Flow Modifications (SRFM). Because work activities of CSRP and SRFM are so integrated, we are providing information on activities that have been consolidated at the task level. These task activities represent chapters in this report.

Open-File Report↗
USGS2007

Project overview: Chapter A in Factors affecting the reproduction, recruitment, habitat, and population dynamics of pallid sturgeon and shovelnose sturgeon in the Missouri River

For more than a hundred years, human activities have modified the natural forces that control the Missouri River and its native fish fauna. While the ecological effects of regulation and channel engineering are understood in general, the current understanding is not sufficient to guide river restoration and management. The U.S. Geological Survey (USGS) is in the third year of a multiagency research effort to determine the ecological requirements for reproduction and survival of the endangered pallid sturgeon ( Scaphirhynchus albus ) and shovelnose sturgeon ( Scaphirhynchus platorhynchus ) in the Missouri River. The multidisciplinary research strategy includes components of behavior, physiology, habitat use, habitat availability, and population modeling of all life stages. Shovelnose sturgeon are used to design the strategy because they are closely related to the pallid sturgeon and are often used as a surrogate species to develop new research tools or to examine the effects of management actions or environmental variables on sturgeon biology and habitat use. During fiscal years 2005 and 2006, the U.S. Army Corps of Engineers (USACE) provided funds to USGS for tasks associated with the Comprehensive Sturgeon Research Program (CSRP) and for tasks associated with evaluation of the Sturgeon Response to Flow Modifications (SRFM). Because work activities of CSRP and SRFM are so integrated, we are providing information on activities that have been consolidated at the task level. These task activities represent chapters in this report.

Missouri River↗
USGS2018

Collections management plan for the U.S. Geological Survey Woods Hole Coastal and Marine Science Center Samples Repository

Since 2002, the Woods Hole Coastal and Marine Science Center Samples Repository has been supporting research by providing secure storage for geological, biological, and geochemical samples; maintaining organization and an active inventory of these sample collections; and providing researchers access to these scientific collections for study and reuse. Over the years, local storage facilities have changed and new collections management strategies have been adapted as sample collections have grown and as research programs and focuses have shifted. The commitment of the Samples Repository to preserve and provide physical samples for future research, however, has remained the same. This report documents the collections management plan developed and implemented by the Woods Hole Coastal and Marine Science Center Samples Repository to manage its scientific collections.

Open-File Report↗
USGS1999

Restoration of bighorn sheep metapopulations in and near 15 national parks: Conservation of severely fragmented species; Volume II, Synopsis of research findings

In 1991, the National Park Service (NPS) initiated a series of research studies to support an effort to restore bighorn sheep (Ovis canadensis) into 15 national parks in the Intennountain West and Colorado Plateau areas (Fig. 1). The Biological Resources Division of the U.S. Geological Survey provided scientific advice and research coordination for the NPS restoration (Fig. 2). The research studies were conducted by scientists from the Biological Resources Division of the USGS (fonnerly NBS) (11 research studies), university-based scientists (Univ. of Wyoming- 2 studies, University of Colorado- 1, Colorado State University- 2, University of California, White Mountain Center- 1, Northern Arizona University - 1, Montana State University - 1) and by state agency veterinarians: Drs. Beth Williams of Wyoming, Mike Miller of Colorado, and Terry Spraker of Colorado State University. Only the highlights of these research studies are presented below. Full research reports are available in Volume III of this series.

Colorado, Montana, North Dakota, South Dakota, Uta↗
USGS2009

Impact of wildfire on levels of mercury in forested watershed systems: Voyageurs National Park, Minnesota

Atmospheric deposition of mercury to remote lakes in mid-continental and eastern North America has increased approximately threefold since the mid-1800s (Swain and others, 1992; Fitzgerald and others, 1998; Engstrom and others, 2007). As a result, concerns for human and wildlife health related to mercury contamination have become widespread. Despite an apparent recent decline in atmospheric deposition of mercury in many areas of the Upper Midwest (Engstrom and Swain, 1997; Engstrom and others, 2007), lakes in which fish contain levels of mercury deemed unacceptable for human consumption and possibly unacceptable for fish-consuming wildlife are being detected with increasing frequency. In northern Minnesota, Voyageurs National Park (VNP) (fig. 1) protects a series of southern boreal lakes and wetlands situated on bedrock of the Precambrian Canadian Shield. Mercury contamination has become a significant resource issue within VNP as high concentrations of mercury in loons, bald eagle eaglets, grebes, northern pike, and other species of wildlife and fish have been found. The two most mercury-contaminated lakes in Minnesota, measured as methylmercury in northern pike ( Esox lucius ), are in VNP. Recent multidisciplinary U.S. Geological Survey (USGS) research demonstrated that the bulk of the mercury in lake waters, soils, and fish in VNP results from atmospheric deposition (Wiener and others, 2006). The study by Wiener and others (2006) showed that the spatial distribution of mercury in watershed soils, lake waters, and age-1 yellow perch ( Perca flavescens ) within the Park was highly variable. The majority of factors correlated for this earlier study suggested that mercury concentrations in lake waters and age-1 yellow perch reflected the influence of ecosystem processes that affected within-lake microbial production and abundance of methylmercury (Wiener and others, 2006), while the distribution of mercury in watershed soils seemed to be partially dependent on forest disturbance, especially the historic forest fire pattern (Woodruff and Cannon, 2002). Forest fire has an essential role in the forest ecosystems of VNP (Heinselman, 1996). Because resource and land managers need to integrate both natural wildfire and prescribed fire in management plans, the potential influence of fire on an element as sensitive to the environment as mercury becomes a critical part of their decisionmaking. A number of recent studies have shown that while fire does have a significant impact on mercury at the landscape level, the observed effects of fire on aquatic environments are highly variable and unpredictable (Caldwell and others, 2000; Garcia and Carrigan, 2000; Kelly and others, 2006; Nelson and others, 2007). Caldwell and others (2000) described an increase in methylmercury in reservoir sediments resulting from mobilization and transport of charred vegetative matter following a fire in New Mexico. Krabbenhoft and Fink (2000) attributed increases in total mercury concentrations in young-of-the-year fish in the Florida Everglades to release of mercury resulting from peat oxidation following fires. A fivefold increase in whole-body mercury accumulation by rainbow trout ( Oncorhynchus mykiss ) following a fire in Alberta, Canada, apparently resulted from increased nutrient concentrations that enhanced productivity and restructured the food web of a lake within the fire’s burn footprint (Kelly and others, 2006). For this study, we determined the short-term effects of forest fire on mercury concentrations in terrestrial and aquatic environments in VNP by comparing and contrasting mercury concentrations in forest soils, lake waters, and age-1 yellow perch for a burned watershed and an adjacent lake, with similar samples from watersheds and lakes with no fire activity (control watersheds and lakes). The concentration of total mercury in whole, 1-year-old yellow perch serves as a good biological indicator for monitoring trends in methylmercury concentrations in food webs of lakes in North America (Wiener and others, 2007). With a limited gape, age-1 yellow perch that hatched the previous year and resided in a lake for 1 year feed largely on zooplankton and small benthic invertebrates. Thus, age-1 yellow perch provide a baseline for methylmercury concentrations for individual lakes that can be compared across spatial areas. The nine appendixes that accompany this report contain the complete datasets for soils, lake waters, and age-1 yellow perch collected for this study. This report uses data from these three media to provide a framework for evaluating short-term effects of fire on mercury in forested soils and possible effects of the mobilization of mercury from soils on lake water quality and aquatic health.

Minnesota↗
USGS2003

Surveillance strategies for detecting Chronic Wasting Disease in free-ranging deer and elk: Results of a CWD surveillance workshop

Executive Summary Chronic Wasting Disease (CWD), a fatal brain disease of North American deer and elk, has recently emerged as an important wildlife management issue. Interest and concern over the spread of this disease and its potential impact on free-ranging cervid populations has increased with discovery of the disease in numerous states and provinces. Current studies suggest that CWD may adversely affect of these highly visible, socially desirable, and economically valuable species. Despite the lack of evidence that CWD affects humans or livestock, a significant concern has been the perceived risk to humans and livestock. Uncertainty about whether CWD poses a health risk to hunters and their families who consume venison has resulted in testing of free-ranging cervids for CWD. In response to many of these concerns, wildlife management agencies across the nation have undertaken surveillance programs to detect CWD in their cervid populations. The nation-wide costs for an extensive CWD surveillance program have been estimated at several million dollars. This document provides guidance on the development and conduct of scientifically sound surveillance programs to detect CWD in free-ranging deer and elk populations. These guidelines will not apply equally to all jurisdictions. In many cases local circumstances, resources, area(s) of concern, disease risk, animal and landscape ecology, political, social, and many other factors will influence the objectives, design, and conduct of CWD surveillance programs. Part I of this report discusses the importance of management goals, strategies, and disease risks in developing a surveillance program. Part II describes surveillance methods, steps in designing a sampling strategy to detect CWD, alternative collection methods, and statistical considerations. Part III describes costs (personnel, time, and money) associated with implementation of these plans that will influence program design. Part IV outlines research that is needed to further development of CWD surveillance methods. Unfortunately in dealing with CWD, many important biological facts are still unknown and further research will be required to answer these questions. In most situations surveillance strategies suggested may require several years to complete, will require careful consideration of management objectives, and extensive operational planning in order to be meaningful and to be scientifically based.

Book↗
USGS2016

Water clarity of the Colorado River—Implications for food webs and fish communities

The closure of Glen Canyon Dam in 1963 resulted in drastic changes to water clarity, temperature, and flow of the Colorado River in Glen, Marble, and Grand Canyons. The Colorado River is now much clearer, water temperature is less variable throughout the year, and the river is much colder in the summer months. The flow—regulated by the dam—is now less variable annually, but has larger daily fluctuations than during pre-dam times. All of these changes have resulted in a different fish community and different food resources for fish than existed before the dam was built. Recent monitoring of water clarity, by measuring turbidity, has helped scientists and river managers understand modern water-clarity patterns in the dam-regulated Colorado River. These data were then used to estimate pre-dam turbidity in the Colorado River in order to make comparisons of pre-dam and dam-regulated conditions, which are useful for assessing biological changes in the river over time. Prior to dam construction, the large sediment load resulted in low water clarity almost all of the time, a condition which was more favorable for the native fish community.

Arizona, California, Colorado, Nevada Utah, New Me↗
USGS2017

U.S. Geological Survey Virginia and West Virginia Water Science Center

The U.S. Geological Survey (USGS) serves the Nation by providing reliable scientific information to describe and understand the Earth; minimize loss of life and property from natural disasters; manage water, biological, energy, and mineral resources; and enhance and protect our quality of life. In support of this mission, the USGS Virginia and West Virginia Water Science Center works in cooperation with many entities to provide reliable, impartial scientific information to resource managers, planners, and the public.

Virginia, West Virginia↗
USGS1978

Water resources along the TAPS route, Alaska, 1970-74

The U.S. Geological Survey installed 10 streamgaging and water-quality stations along the trans-Alaska pipeline route (TAPS) starting in 1970. These stations, mostly north of Fairbanks, add to the historical network of gaging stations and provide records of hydrologic conditions along the TAPS route. Selected data from 23 gaging stations along the TAPS route for the period 1970-74 (prior to construction of the pipeline) are compiled in graphic form. The data include annual hydrographs of daily mean or instantaneous values of a standard set of parameters which are indicative of physical, chemical and biological conditions of the streams. The hydrographs facilitate comparisons of data, both in time and between stream sites. Thus, they are a tool for evaluating streamflow characteristics along the TAPS route during the preconstruction period. (Woodard-USGS)

Alaska↗
USGS1992

Salmonid whirling disease

This paper provides the latest scientific and technical advances in the management of salmonid whirling disease caused by the myxosporean Myxobolus cerebralis (Syn. Myxosoma cerebralis). The complete life cycle of the parasite and the biology of the infective agent to fish, the actinosporean Triactinomyxon stage, are reviewed, and suggested procedures for detection, identification, and control of the disease are discussed. The paper offers sources of information and related reference materials of interest to fish culturists, fishery biologists, and students.

Fish and Wildlife Leaflet↗
USGS2005

Coral disease and health workshop: Coral histopathology II, July 12-14, 2005

The health and continued existence of coral reef ecosystems are threatened by an increasing array of environmental and anthropogenic impacts. Coral disease is one of the prominent causes of increased mortality among reefs globally, particularly in the Caribbean. Although over 40 different coral diseases and syndromes have been reported worldwide, only a few etiological agents have been confirmed; most pathogens remain unknown and the dynamics of disease transmission, pathogenicity and mortality are not understood. Causal relationships have been documented for only a few of the coral diseases, while new syndromes continue to emerge. Extensive field observations by coral biologists have provided substantial documentation of a plethora of new pathologies, but our understanding, however, has been limited to descriptions of gross lesions with names reflecting these observations (e.g., black band, white band, dark spot). To determine etiology, we must equip coral diseases scientists with basic biomedical knowledge and specialized training in areas such as histology, cell biology and pathology. Only through combining descriptive science with mechanistic science and employing the synthesis epizootiology provides will we be able to gain insight into causation and become equipped to handle the pending crisis. One of the critical challenges faced by coral disease researchers is to establish a framework to systematically study coral pathologies drawing from the field of diagnostic medicine and pathology and using generally accepted nomenclature. This process began in April 2004, with a workshop titled Coral Disease and Health Workshop: Developing Diagnostic Criteria co-convened by the Coral Disease and Health Consortium (CDHC), a working group organized under the auspices of the U.S. Coral Reef Task Force, and the International Registry for Coral Pathology (IRCP). The workshop was hosted by the U.S. Geological Survey, National Wildlife Health Center (NWHC) in Madison, Wisconsin and was focused on gross morphology and disease signs observed in the field. A resounding recommendation from the histopathologists participating in the workshop was the urgent need to develop diagnostic criteria that are suitable to move from gross observations to morphological diagnoses based on evaluation of microscopic anatomy. As a continuation of building the foundation and framework for coral disease diagnostics, the CDHC convened the Coral Disease and Health Workshop: Coral Histopathology II in Charleston, South Carolina, July 11-14, 2005. The workshop was hosted by the Department of Pathology and Laboratory Medicine at the Medical University of South Carolina, Charleston, SC which provided expertise, facilities and equipment in support of the workshop. All of the histological slides and related photographs used in the discussions were prepared and supplied by the IRCP. This workshop brought together 15 experts in veterinary and medical pathology and coral biology from national and international research institutes and government laboratories. The mission was to devise a standardized approach to examining microscopic anatomy and pathology of corals and a standardized nomenclature to facilitate accurate descriptions of the microscopic morphology of corals and enhance communication among specialists investigating causes of coral death. 2 The participants of this workshop deliberated for 3 days to refine the nomenclature for gross and microscopic anatomy of corals and systematically described microscopic changes associated with selected coral diseases. The findings and recommendations from the deliberations will be submitted to the research community for peer review. The standardized nomenclature and descriptions produced at this workshop will ultimately be made available to the scientific community through a variety of media including the World Wide Web. An exciting highlight of this meeting was provided by Professor Robert Ogilvie (MUSC Department of Cell Biology and Anatomy) when he introduced participants to a new digital technology that is revolutionizing histology and histopathology in the medical field. The Virtual Slide technology creates digital images of histological tissue sections by computer scanning actual slides in high definition and storing the images for retrieval and viewing. Virtual slides now allow any investigator with access to a computer and the web to view, search, annotate and comment on the same tissue sections in real time. Medical and veterinary slide libraries across the country are being converted into virtual slides to enhance biomedical education, research and diagnosis. The coral health and disease researchers at this workshop deem virtual slides as a significant way to increase capabilities in coral histology and a means for pathology consultations on coral disease cases on a global scale.

NOAA Technical Memorandum↗