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At least 1,225 records · Page 68Linked to original sources
USGS2026

At the edge of change: Native Phragmites persistence and nonnative arrival along the dam-regulated Colorado River

Premise The southwestern United States is at the forefront of nonnative Phragmites australis subsp. australis expansion. Native Phragmites australis subsp. americanus , likely in decline in North America, is ecologically and culturally important and of conservation interest. In the greater Grand Canyon region, the Glen Canyon Dam led to loss of habitat upstream and increases in Phragmites downstream. Recent increases correspond with changes to dam operations and the arrival of nonnative Phragmites . Determining the native status of Phragmites stands along the Colorado River and around Lake Powell can inform complex management choices and restoration planning. Methods Phragmites subspecies at 83 locations from southern Utah through northern Arizona, United States were genetically tested using real-time PCR. Genetic diversity and structure were assessed using microsatellite loci for 13 native Phragmites stands. Morphological traits of southwestern native Phragmites were compared to those of nonnative Phragmites . Results Nonnative Phragmites was identified at four of the 83 locations. Native Phragmites in the study area is genetically diverse with little regional genetic structure, but substantial genetic differentiation among sites. Southwestern native Phragmites is morphologically variable, but characteristics can be used together to distinguish it from nonnative Phragmites . Conclusions The greater Grand Canyon and Glen Canyon regions support a large, genetically diverse native Phragmites population, which is potentially threatened by nonnative Phragmites and changes to river management. Determining conditions that would lead to nonnative Phragmites invasion of desert wetlands will facilitate discussions about the risks and benefits of Phragmites management in these unique ecosystems.

Arizona, Nevada, Utah↗
USGS2021

Defining aquatic habitat zones across northern Gulf of Mexico estuarine gradients through submerged aquatic vegetation species assemblage and biomass data

Submerged aquatic vegetation (SAV) creates highly productive habitats in coastal areas, providing support for many important species of fish and wildlife. Despite the importance and documented loss of SAV across fresh to marine habitats globally, we lack consistent baseline data on estuarine SAV resources, particularly in the northern Gulf of Mexico (NGOM) estuaries. To understand SAV distribution in the NGOM, SAV biomass and species identity were collected at 384 sites inter-annually (June–September; 2013–2015) from Mobile Bay, Alabama, to San Antonio Bay, Texas, USA. Coastwide, SAV distribution and biomass were consistent across years, covering an estimated 87,000 ha, and supporting approximately 16 ± 1% total cover with an average biomass of 24.5 ± 1.9 g m −2 . Differences in hydrology (i.e., precipitation, freshwater input, water depth) and exposure (i.e., wave and wind energy) manifested in unique SAV assemblages and biomass distributions across the region (i.e., Coastal Mississippi-Alabama, Mississippi River Coastal Wetlands, Chenier Plain, Texas Mid-Coast) and estuarine gradient (i.e., marsh zones defined as fresh, intermediate, brackish, saline). Descriptive cluster analyses identified indicator SAV species, known as medoid observations that represented combined salinity, turbidity, and depth conditions unique to different region and marsh zone combinations. While the presence of SAV is often used as an indicator of ecological health, identifying a medoid-based SAV indicator species in aquatic habitats can be used to describe estuarine conditions in more detail and develop aquatic habitat zones. Exploration and the use of this type of field data could be developed as a means to track, manage, and define aquatic habitats across regional and estuarine gradients and further develop ecosystem-based assessment and restoration activities. Identifying aquatic zones through a representative medoid associates SAV species with locations defined by both long-term salinity and salinity variability, water depth, and exposure, which is a powerful potential tool for managers and restoration decision-makers.

Alabama, Louisiana, Mississippi, Texas↗
USGS2005

Threats, conservation strategies, and prognosis for suckers (Catostomidae) in North America: insights from regional case studies of a diverse family of non-game fishes

Catostomid fishes are a diverse family of 76+ freshwater species that are distributed across North America in many different habitats. This group of fish is facing a variety of impacts and conservation issues that are somewhat unique relative to more economically valuable and heavily managed fish species. Here, we present a brief series of case studies to highlight the threats such as migration barriers, flow regulation, environmental contamination, habitat degradation, exploitation and impacts from introduced (non-native) species that are facing catostomids in different regions. Collectively, the case studies reveal that individual species usually are not threatened by a single, isolated factor. Instead, species in general face numerous stressors that threaten multiple stages of their life history. Several factors have retarded sucker conservation including widespread inabilities of field workers to distinguish some species, lack of basic natural history and ecological knowledge of life history, and the misconception that suckers are tolerant of degraded conditions and are of little social or ecological value. Without a specific constituent group lobbying for conservation of non-game fishes, all such species, including members of the catostomid family, will continue to face serious risks because of neglect, ignorance, and misunderstanding. We suggest that conservation strategies should incorporate research and education/outreach components. Other conservation strategies that would be effective for protecting suckers include freshwater protected areas for critical habitat, restoration of degraded habitat, and design of catostomid-friendly fish bypass facilities. We believe that the plight of the catostomids is representative of the threats facing many other non-game freshwater fishes with diverse life-history strategies globally.

Biological Conservation↗
USGS2016

Habitat and fish assemblage associations and current status of northern leatherside chub Lepidomeda copei in western Wyoming

Human activities have extensively altered native fish assemblages and their habitats in the western United States. Conservation and restoration for long-term persistence of these fishes requires knowledge of their distributional patterns and life history requirements. Northern leatherside chub Lepidomeda copei (hereafter northern leatherside) is a cyprinid native to the Snake and Bear River Basins of Wyoming, Idaho, Nevada, and Utah, and it is believed to have declined in distribution relative to historical records. To address information gaps in the species' ecology and assess its status in the state, the objectives of this study were first to document the distribution (2010–2011) of northern leatherside in Wyoming and then to examine habitat factors related to the entire fish assemblage and to evaluate specific habitat associations of northern leatherside in the Bear River Basin, Wyoming. In the Bear River and Upper Snake River Basins, we documented the distribution of northern leatherside and compared it to the previously known distribution. Across the Bear River Basin, we used habitat measurements to assess abiotic features related to the distribution and abundance of northern leatherside. Northern leatherside was found across the Bear River Basin and was present in 2 streams each in the Upper Snake River and Green River Basins in Wyoming. Populations in Wyoming appear to represent the core of northern leatherside range, and our work provided a finer-scale delineation of the species' occurrence. Northern leatherside was collected from a variety of habitats, but multivariate analyses and occurrence modeling indicated it was associated with increased channel depth and depth variability, and positively associated with other native fishes (including mountain sucker Catostomus platyrhynchus, redside shiner Richardsonius balteatus, and speckled dace Rhinichthys osculus). These findings on the distribution and ecology of northern leatherside provide important new information to assist successful management and conservation efforts within Wyoming and across the species' range.

Wyoming↗
USGS2020

Estimating abiotic thresholds for sagebrush condition class in the western United States

Sagebrush ecosystems of the western United States can transition from extended periods of relatively stable conditions to rapid ecological change if acute disturbances occur. Areas dominated by native sagebrush can transition from species-rich native systems to altered states where non-native annual grasses dominate, if resistance to annual grasses is low. The non-native annual grasses provide relatively little value to wildlife, livestock, and humans and function as fuel that increases fire frequency. The more land area covered by annual grasses, the higher the potential for fire, thus reducing the potential for native vegetation to reestablish, even when applying restoration treatments. Mapping areas of stability and areas of change using machine-learning algorithms allows both the identification of dominant abiotic variables that drive ecosystem dynamics and the variables’ important thresholds. We develop a decision-tree model with rulesets that estimate three classes of sagebrush condition (i.e., sagebrush recovery, tipping point [ecosystem degradation], and stable). We find rulesets that primarily drive development of the sagebrush recovery class indicate areas of midelevations (1 602 m), warm 30-yr July temperature maximums (tmax) (30.62°C), and 30-yr March precipitation (ppt) averages equal to 26.26 mm, about 10% of the 30-yr annual ppt values. Tipping point and stable classes occur at elevations that are lower (1 505 m) and higher (1 939 m), respectively, more mesic during March and annually, and experience lower 30-yr July tmax averages. These defined variable averages can be used to understand current dynamics of sagebrush condition and to predict where future transitions may occur under novel conditions.

Arizona, California, Colorado, Idaho, Montana, Neb↗
USGS2019

Water salinity and inundation control soil carbon decomposition during salt marsh restoration: An incubation experiment

Coastal wetlands are a significant carbon (C) sink since they store carbon in anoxic soils. This ecosystem service is impacted by hydrologic alteration and management of these coastal habitats. Efforts to restore tidal flow to former salt marshes have increased in recent decades and are generally associated with alteration of water inundation levels and salinity. This study examined the effect of water level and salinity changes on soil organic matter decomposition during a 60‐day incubation period. Intact soil cores from impounded fresh water marsh and salt marsh were incubated after addition of either sea water or fresh water under flooded and drained water levels. Elevating fresh water marsh salinity to 6 to 9 ppt enhanced CO 2 emission by 50%−80% and most typically decreased CH 4 emissions, whereas, decreasing the salinity from 26 ppt to 19 ppt in salt marsh soils had no effect on CO 2 or CH 4 fluxes. The effect from altering water levels was more pronounced with drained soil cores emitting ~10‐fold more CO 2 than the flooded treatment in both marsh sediments. Draining soil cores also increased dissolved organic carbon (DOC) concentrations. Stable carbon isotope analysis of CO 2 generated during the incubations of fresh water marsh cores in drained soils demonstrates that relict peat OC that accumulated when the marsh was saline was preferentially oxidized when sea water was introduced. This study suggests that restoration of tidal flow that raises the water level from drained conditions would decrease aerobic decomposition and enhance C sequestration. It is also possible that the restoration would increase soil C decomposition of deeper deposits by anaerobic oxidation, however this impact would be minimal compared to lower emissions expected due to the return of flooding conditions.

Ecology and Evolution↗
USGS2022

Landscape-scale forest restoration decreases vulnerability to drought mortality under climate change in southwest USA ponderosa forest

Drought-induced tree mortality is predicted to increase in dry forests across the western USA as future projections show hotter, drier climates potentially resulting in large-scale tree die-offs, changes in species composition, and loss of forest ecosystem services, including carbon storage. While some studies have found that forest stands with greater basal areas (BA) have higher drought mortality, many have not evaluated the extent to which forest structure, either overly dense forests due to fire suppression or forests restored to lower densities, interacts with drought mortality. The southwestern USA is particularly susceptible to tree mortality due to the predicted increases in temperature, drier soils, and forests with high density. Our objective was to evaluate how ponderosa pine mortality is expected to be influenced by the Four Forests Restoration Initiative, a large-scale forest restoration effort ongoing in northern Arizona, USA, that will reduce stand BA by approximately 40%. Specifically, we modeled drought mortality in three time periods, one contemporary (1970-2010), and two future (2020-2059 and 2060-2099) under three restoration scenarios: no thinning, 4FRI thinning, and a BA reduction beyond the 4FRI plan (4FRI-intensive). We estimated mortality using 11 climate models under two emissions scenarios. Without thinning, our model predicted that by mid-century (2020-2059), changes in climate could increase annual ponderosa pine mortality rates by 45-57% over contemporary rates. However, with thinning, mid-century mortality was predicted to remain near or below contemporary rates and these rates are 31-35% (4FRI) and 46-51% (4FRI-intensive) less than the mid-century scenarios without thinning. Our study shows that while climate change is likely to increase tree mortality rates, large-scale forest restoration projects, such as 4FRI, have the potential to ameliorate the effects of climate change and keep mortality rates near contemporary levels for decades.

Arizona↗
USGS2015

Challenges of establishing big sgebrush ( Artemisia tridentata ) in rangeland restoration: effects of herbicide, mowing, whole-community seeding, and sagebrush seed sources

The loss of big sagebrush (Artemisia tridentata Nutt.) on sites disturbed by fire has motivated restoration seeding and planting efforts. However, the resulting sagebrush establishment is often lower than desired, especially in dry areas. Sagebrush establishment may be increased by addressing factors such as seed source and condition or management of the plant community. We assessed initial establishment of seeded sagebrush and four populations of small outplants (from different geographies, climates, and cytotypes) and small sagebrush outplants in an early seral community where mowing, herbicide, and seeding of other native plants had been experimentally applied. No emergence of seeded sagebrush was detected. Mowing the site before planting seedlings led to greater initial survival probabilities for sagebrush outplants, except where seeding also occurred, and these effects were related to corresponding changes in bare soil exposure. Initial survival probabilities were > 30% greater for the local population of big sagebrush relative to populations imported to the site from typical seed transfer distances of ~320–800 km. Overcoming the high first-year mortality of outplanted or seeded sagebrush is one of the most challenging aspects of postfire restoration and rehabilitation, and further evaluation of the impacts of herb treatments and sagebrush seed sources across different site types and years is needed.

Rangeland Ecology and Management↗
USGS2011

Coastal habitats of the Elwha River, Washington- Biological and physical patterns and processes prior to dam removal

This report includes chapters that summarize the results of multidisciplinary studies to quantify and characterize the current (2011) status and baseline conditions of the lower Elwha River, its estuary, and the adjacent nearshore ecosystems prior to the historic removal of two long-standing dams that have strongly influenced river, estuary, and nearshore conditions. The studies were conducted as part of the U.S. Geological Survey Multi-disciplinary Coastal Habitats in Puget Sound (MD-CHIPS) project. Chapter 1 is the introductory chapter that provides background and a historical context for the Elwha River dam removal and ecosystem restoration project. In chapter 2, the volume and timing of sediment delivery to the estuary and nearshore are discussed, providing an overview of the sediment stored in the two reservoirs and the expected erosion mechanics of the reservoir sediment deposits after removal of the dams. Chapter 3 describes the geological background of the Olympic Peninsula and the geomorphology of the Elwha River and nearshore. Chapter 4 details a series of hydrological data collected by the MD-CHIPS Elwha project. These include groundwater monitoring, surface water-groundwater interactions in the estuary, an estimated surface-water budget to the estuary, and a series of temperature and salinity measurements. Chapter 5 details the work that has been completed in the nearshore, including the measurement of waves, tides, and currents; the development of a numerical hydrodynamic model; and a description of the freshwater plume entering the Strait of Juan de Fuca. Chapter 6 includes a characterization of the nearshore benthic substrate developed using sonar, which formed a habitat template used to design scuba surveys of the benthic biological communities. Chapter 7 describes the ecological studies conducted in the lower river and estuary and includes characterization of juvenile salmon diets and seasonal estuary utilization patterns using otolith analysis to determine habitat specific and hatchery compared with wild patterns in juvenile Chinook salmon, assessment of benthic and terrestrial macroinvertebrate communities, and seasonal patterns of water nutrients. In Chapter 8, the vegetation communities of the eastern estuary are characterized by mapped vegetation cover types and samples collected for vegetation composition and diversity. Chapter 9 summarizes the existing conditions of the study area as detailed in this report and describes some of the possible outcomes of river restoration on the coastal ecosystems of the Elwha River. Together, these different scientific perspectives form a basis for understanding the Elwha River ecosystem, an environment that has and will undergo substantial change. A century of change began with the start of dam construction in 1910; additional major change will result from dam removal scheduled to begin in September 2011. This report provides a scientific snapshot of the lower Elwha River, its estuary, and adjacent nearshore ecosystems prior to dam removal that can be used to evaluate the responses and dynamics of various system components following dam removal.

Scientific Investigations Report↗
USGS2021

Cooperative Fish and Wildlife Research Units program—2020 research abstracts

The U.S. Geological Survey (USGS) serves as the research arm of the U.S. Department of the Interior and has established a series of strategic goals that focus its efforts on serving the American people. Within the USGS, the Ecosystems Mission Area is responsible for conducting and sponsoring research that addresses the following thematic objectives under the overarching strategic goal of “Science that Supports Our Resources in Wild and Urban Spaces, and the Landscapes In-Between”: Science supporting a legacy of sustainable fish and wildlife, Social science and human components in land, water, and wildlife conservation, Trusted science supporting hard decisions on at-risk species, Science to battle costly biological threats, Providing science for managing risks and responding to extreme events, Science for preservation and restoration of iconic landscapes, and Science to support adaptation and address impacts of climate and land change. This report provides abstracts of most of the ongoing and recently completed research investigations of the USGS Cooperative Fish and Wildlife Research Units program. The report is organized by the following major science themes that contribute to the objectives of the USGS: Advanced Technologies Climate Science Decision Science Ecological Flows Ecosystem Services Energy Fish and Wildlife Health and Disease Human Dimensions Invasive Species Landscape Ecology Species and Habitat Management Species of Greatest Conservation Need Threatened and Endangered Species

Circular↗
USGS2025

From subsidies to stressors: Shifting ecological baselines alter biological responses to nutrients in highly modified agricultural streams

Subsidy–stress gradients offer a useful framework for understanding ecological responses to perturbation and may help inform ecological metrics in highly modified systems. Historic, region-wide shifts from bottomland hardwood forest to row crop agriculture can cause positively skewed impact gradients in alluvial plain ecoregions, resulting in tolerant organisms that typically exhibit a subsidy response (increased abundance in response to environmental stressors) shifting to a stress response (declining abundance at higher concentrations). As a result, observed biological tolerance in modified ecosystems may differ from less modified regions, creating significant challenges for detecting biological responses to restoration efforts. Using the agriculturally dominated Mississippi Alluvial Plain (MAP) ecoregion in Mississippi, USA, as a case study, we tested the hypothesis that macroinvertebrate taxa that typically display a subsidy response to nutrient enrichment in less modified ecoregions (i.e., nutrient-tolerance) shift to a stress response to increasing nutrients in highly modified watersheds with elevated baseline nutrient conditions (i.e., nutrient intolerance). The abundance and diversity of MAP-specific intolerant taxa identified with threshold indicator taxa analysis were either unresponsive or exhibited a subsidy response to increasing nutrients in less modified ecoregions in Mississippi with less land alteration and lower nutrient concentrations, but declined at higher concentrations, providing evidence for a stress response to elevated nutrients in the MAP. Additionally, MAP-specific tolerant and intolerant taxa richness responded to increased nutrients predictably and consistently across space and time within the MAP. However, in MAP streams, elevated specific conductance was predicted to dampen the response of tolerant and intolerant taxa richness to increasing nutrient concentrations, highlighting the importance of considering multistressor interactions when interpreting biological data. Lastly, we demonstrate the efficacy of this approach with sediment bacterial communities characterized with amplicon sequencing, which lack sufficient life history characteristics necessary for the development of multimetric indices. Both macroinvertebrate and bacterial communities responded similarly to increasing nutrient concentrations, suggesting DNA-based approaches may provide an efficient biological assessment tool for monitoring water quality improvements in highly modified watersheds.

Mississippi↗
USGS2016

Transition of vegetation states positively affects harvester ants in the Great Basin, United States

Invasions by non-native plants can alter ecosystems such that new ecological states are reached, but less is known about how these transitions influence animal populations. Sagebrush (Artemisia tridentata) ecosystems are experiencing state changes because of fire and invasion by exotic annual grasses. Our goal was to study the effects of these state changes on the Owyhee and western harvester ants ( Pogonomyrmex salinus Olsen and P. occidentalis Cresson, respectively). We sampled 358 1-ha plots across the northern Great Basin, which captured unburned and burned conditions across 1 −≥31 years postfire. Our results indicated an immediate and consistent change in vegetation states from shrubland to grassland between 1 and 31 years postfire. Harvester ant occupancy was unrelated to time since fire, whereas we observed a positive effect of fire on nest density. Similarly, we discovered that fire and invasion by exotic annuals were weak predictors of harvester ant occupancy but strong predictors of nest density. Occupancy of harvester ants was more likely in areas with finer-textured soils, low precipitation, abundant native forbs, and low shrub cover. Nest density was higher in arid locations that recently burned and exhibited abundant exotic annual and perennial (exotic and native) grasses. Finally, we discovered that burned areas that received postfire restoration had minimal influence on harvester ant occupancy or nest density compared with burned and untreated areas. These results suggest that fire-induced state changes from native shrublands to grasslands dominated by non-native grasses have a positive effect on density of harvester ants (but not occupancy), and that postfire restoration does not appear to positively or negatively affect harvester ants. Although wildfire and invasion by exotic annual grasses may negatively affect other species, harvester ants may indeed be one of the few winners among a myriad of losers linked to vegetation state changes within sagebrush ecosystems.

Great Basin↗
USGS2016

Overwintering strategies of migratory birds: a novel approach for estimating seasonal movement patterns of residents and transients

Our understanding of movement patterns in wildlife populations has played an important role in current ecological knowledge and can inform landscape conservation decisions. Direct measures of movement can be obtained using marked individuals, but this requires tracking individuals across a landscape or multiple sites. We demonstrate how movements can be estimated indirectly using single-site, capture–mark–recapture (CMR) data with a multi-state open robust design with state uncertainty model (MSORD-SU). We treat residence and transience as two phenotypic states of overwintering migrants and use time- and state-dependent probabilities of site entry and persistence as indirect measures of movement. We applied the MSORD-SU to data on eight species of overwintering Neotropical birds collected in 14 countries between 2002 and 2011. In addition to entry and persistence probabilities, we estimated the proportions of residents at a study site and mean residence times. We identified overwintering movement patterns and residence times that contrasted with prior categorizations of territoriality. Most species showed an evidence of residents entering sites at multiple time intervals, with transients tending to enter between peak resident movement times. Persistence and the proportion of residents varied by latitude, but were not always positively correlated for a given species. Synthesis and applications . Our results suggest that migratory songbirds commonly move among habitats during the overwintering period. Substantial proportions of populations appear to be comprised of transient individuals, and residents tend to persist at specific sites for relatively short periods of time. This information on persistence and movement patterns should be explored for specific habitats to guide landscape management on the wintering grounds, such as determining which habitats are conserved or restored as part of certification programmes of tropical agroforestry crops. We suggest that research and conservation efforts on Neotropical migrant songbirds focus on identifying landscape configurations and regional habitat networks that support these diverse overwintering strategies to secure full life cycle conservation.

Journal of Applied Ecology↗
USGS2023

Crossing the threshold: Invasive grasses inhibit forest restoration on Hawaiian islands

Forest removal for livestock grazing is a striking example of human-caused state change leading to a stable, undesirable invasive grass system that is resistant to restoration efforts. Understanding which factors lead to resilience to the alternative grass state can greatly benefit managers when planning forest restoration. We address how thresholds of grass cover and seed rain might influence forest recovery in a restoration project on Hawaiʻi Island, USA. Since the 1980s, over 400,000 Acacia koa (koa) trees have been planted across degraded pasture, and invasive grasses still dominate the understory with no native woody-plant recruitment. Between this koa/grass matrix are remnant native Metrosideros polymorpha (ʻōhiʻa) trees beneath which native woody plants naturally recruit. We tested whether there were threshold levels of native woody understory that accelerate recruitment under both tree species by monitoring seed rain at 40 trees (20 koa and ʻōhiʻa) with a range of native woody understory basal area (BA). We found a positive relationship between total seed rain (but not bird-dispersed seed rain) and native woody BA and a negative relationship between native woody BA and grass cover, with no indication of threshold dynamics. We also experimentally combined grass removal levels with seed rain density (six levels) of two common understory species in plots under koa ( n = 9) and remnant ʻōhiʻa ( n = 9). Few seedlings emerged when no grass was removed despite adding seeds at densities two to 75 times higher than naturally occurring. However, seedling recruitment increased two to three times once at least 50% of grass was removed. Existing survey data of naturally occurring seedlings also supported a threshold of grass cover below which seedlings were able to establish. Thus, removal of all grasses is not necessary to achieve system responses: Even moderate reductions (~50%) can increase rates of native woody recruitment. The nonlinear thresholds found here highlight how incremental changes to an inhibitory factor lead to limited restoration success until a threshold is crossed. The resources needed to fully eradicate an invasive species may be unwarranted for state change, making understanding where thresholds lie of the utmost importance to prioritize resources.

Hawaii↗
USGS1999

Restoring marsh elevation in a rapidly subsiding salt marsh by thin-layer deposition of dredged material

Thin-layer deposition of dredged material on coastal marsh by means of high-pressure spray dredging (Jet-Spray??2) technology has been proposed as a mechanism to minimize wetland impacts associated with traditional bucket dredging technologies and to restore soil elevations in deteriorated marshes of the Mississippi River delta. The impact of spray dredging on vegetated marsh and adjacent shallow-water habitat (formerly vegetated marsh that deteriorated to open water) was evaluated in a 0.5-ha Spartina alterniflora-dominated salt marsh in coastal Louisiana. The thickness of dredged sediment deposits was determined from artificial soil marker horizons and soil elevation change was determined from sedimentation-erosion tables (SET) established prior to spraying in both sprayed and reference marshes. The vertical accretion and elevation change measurements were made simultaneously to allow for calculation of shallow (~5 m depth) subsidence (accretion minus elevation change). Measurements made immediately following spraying in July 1996 revealed that stems of S. alterniflora were knocked down by the force of the spray and covered with 23 mm of dredged material. Stems of S. alterniflora soon recovered, and by July 1997 the percent cover of S. alterniflora had increased three-fold over pre-project conditions. Thus, the layer of dredged material was thin enough to allow for survival of the S. alterniflora plants, with no subsequent colonization by plant species typical of higher marsh zones. By February 1998, 62 mm of vertical accretion accumulated at this site, and little indication of disturbance was noted. Although not statistically significant, soil elevation change was greater than accretion on average at both the spray and reference marshes, suggesting that subsurface expansion caused by increased root biomass production and/or pore water storage influence elevation in this marsh region. In the adjacent shallow water pond, 129 mm of sediment was deposited in July 1996 as a result of spraying, and despite initial shallow subsidence and continual erosion through February 1998, water bottom elevation was raised sufficiently to allow S. alterniflora to invade via rhizome growth from the adjacent marsh. Hence, thin-layer deposition of dredged material at this site was effective at restoring and maintaining marsh elevation after 1.5 years. However, if the open water sediment deposits are not soon completely stabilized via further vegetative colonization, erosion may eventually lower elevations to the level where emergent vegetation cannot persist.

Ecological Engineering↗
USGS2025

Prioritizing chemicals of emerging concern in the Great Lakes Basin using covariance of chemical concentrations and diverse biological responses from a variety of species

The Great Lakes Restoration Initiative aims to protect and restore the nation’s largest freshwater resource, in part, by furthering our understanding of the effects of contaminants of emerging concern (CECs) and chemical mixtures on aquatic and terrestrial organisms. To address this goal, an interagency team conducted field studies at sites along the Maumee River in Ohio, USA, in 2016–2017, monitoring CEC levels along with diverse in vitro and in vivo biological effects in ecologically relevant species (fathead minnows, tree swallows, and golden clams). The objective of the present work was to prioritize the CECs in these studies for further monitoring and assessment by determining if there are patterns in chemical–bioeffect relations across data sets, species, and response types that indicate relatively high or low hazard to aquatic life from CEC exposure. Of the 748 monitored chemicals, 425 were detected and were analyzed for covariance with bioeffects. All 748 chemicals were placed into 10 bins based on their frequencies of monitoring, detection, and covariance with bioeffects across studies and species. We describe how chemicals can be prioritized across bins to aid monitoring and assessment efforts. Our approach using effects-based monitoring data is especially useful for prioritizing chemicals with little or no traditional toxicity testing data. Similar evidence-based prioritizations will allow agencies to more efficiently allocate limited resources to improve the ability to protect aquatic and terrestrial organisms from adverse impacts due to contaminant exposure.

Ohio↗
USGS2014

Role of large- and fine-scale variables in predicting catch rates of larval Pacific lamprey in the Willamette Basin, Oregon

Pacific lamprey Entosphenus tridentatus is an anadromous fish native to the Pacific Northwest of the USA. That has declined substantially over the last 40 years. Effective conservation of this species will require an understanding of the habitat requirements for each life history stage. Because its life cycle contains extended freshwater rearing (3–8 years), the larval stage may be a critical factor limiting abundance of Pacific lamprey. The objective of our study was to estimate the influence of barriers and habitat characteristics on the catch-per-unit-effort (CPUE) of larval Pacific lamprey in the Willamette River Basin, Oregon, USA. We sampled lampreys at multiple locations in wadeable streams throughout the basin in 2011–13 and used an information theoretic approach to examine the relative influence of fine- and large-scale predictors of CPUE. Pacific lamprey was observed across the basin, but its relative abundance appeared to be limited by the presence of natural and artificial barriers in some sub-basins. Lower velocity habitats such as off-channel areas and pools contained higher densities of larval lamprey; mean Pacific lamprey CPUE in off-channel habitats was 4 and 32 times greater than in pools and riffles respectively. Restoration and conservation strategies that improve fish passage, enhance natural hydrologic and depositional processes and increase habitat heterogeneity will likely benefit larval Pacific lamprey.

Oregon↗
USGS2025

Streamflow extents and hydraulic characteristics of Meadow Valley Wash at Stuart Ranch, near Rox, Nevada

The former Stuart Ranch, now managed by the Bureau of Land Management, is transected by Meadow Valley Wash, where 4,600 feet of perennial stream and adjacent riparian vegetation provide critical habitat for several wildlife and aquatic species protected under the Endangered Species Act. The stream has been altered by prior construction of irrigation diversions, gravel mining, and removal of riparian vegetation, resulting in the loss of instream and riparian vegetation and disconnected floodplains. The stream alteration has also resulted in the loss of native species and increased non-native invasive species and changes in ecological cycles. With the goal of improving habitat extent and quality for native threatened and endangered species, the Bureau of Land Management (BLM) is considering establishing perennial streams through braided side channels by constructing beaver dam analogs, excavating side channel connectors, and grading an irrigation reservoir berm on the floodplain. The U.S. Geological Survey (USGS) provided hydraulic modeling to assist the BLM in evaluating how possible restoration modifications could affect the extent of aquatic, riparian, and other habitat types. Three two-dimensional (2-D) hydraulic models were developed to simulate 2021 conditions (when most of the topographic data were collected), minor restoration modifications (one excavated side channel and a beaver dam analog), and major restoration modifications (three excavated side channels, a beaver dam analog, and an excavated and graded area to remove the irrigation reservoir) to determine streamflow-inundation extents and hydraulic characteristics (depth and velocity) for base flow and various flood (50-, 20-, 10-, 4-, 2-, and 1-percent annual exceedance probability [AEP]) scenarios. An average summer base flow of 0.92 cubic feet per second was estimated based on data from a USGS streamgage in the study area. The 50-, 20-, 10-, 4-, 2-, and 1-percent AEP streamflows were estimated based on a flood-frequency analysis of data from the streamgage. The base flow and AEP floods were combined with surveyed topographic data to create a 2-D unsteady hydraulic model. The hydraulic model was used to simulate the base flow and flood-inundation extents and hydraulic characteristics under 2021 conditions and with two possible restoration modification scenarios. Under 2021 conditions, flow remains in a single channel until the most downstream end of the modeled reach, where flow then expands into slower velocity pools. During floods, streamflow begins to enter the side channels at the 50-percent flood, expands into the east floodplain at 20-percent flood, and flows in the irrigation reservoir at 4-percent flood. Compared to 2021 conditions with no terrain modification, base flow under the possible restoration modifications enters and remains in the side channels, thus increasing the likelihood of expanding riparian habitat. Additionally, during floods under the major restoration modifications, streamflow expands into the modified terrain surrounding the irrigation reservoir at 10-percent AEP, as opposed to 4-percent AEP under 2021 conditions. For all modeled streamflow scenarios, streamflow is deepest in the center of the main and side channels, as well as the downstream pooled areas. Streamflow is fastest in the narrow sections of the channels, especially in the upper 1,220 feet of the modeled reach.

Nevada↗