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USGS1998

Analysis of the influence of spatial pattern in habitat selection studies

Design and analysis of wildlife habitat selection studies typically do not assess the effect of spatial pattern on the habitat selection process. Effects of landscape scale pattern on habitat selection cannot be accomplished without replicate study areas, because pattern is a single, albeit multifaceted, attribute of an area. For a single area, however, the influence of pattern-related characteristics, such as shape and edge shared with adjacent patches, can be estimated by using GLIM (McCullough and Neider 1983) procedures to model patch-specific frequency counts of animal use as a function of these parameters. This approach is evaluated and illustrated with simulated breeding-bird counts in a South Carolina study area for which a GIS land cover classification is available. A related technique for evaluating whether movement from patch to patch is selective is developed and illustrated for designs that involve collection of trajectory data from monitored individuals. These designs and analyses are feasible given current GIS and GPS technology. Statistical inferences from habitat selection studies should be interpreted within the context of a range of scales at which animals differentiate between patch attributes.

Journal of Agricultural, Biological, and Environme↗

USGS2022

Potential effects of energy development on environmental resources of the Williston Basin in Montana, North Dakota, and South Dakota—Species of conservation concern

The ecosystems of the Williston Basin provide direct and indirect benefits to society. These benefits include carbon sequestration, flood control, nutrient rich soils for agricultural productivity, and habitat for wildlife. This chapter’s main focus is on the effects of energy development on species that occupy the ecosystems in the Williston Basin. We compiled a list of documented species of conservation concern that are of most interest to Federal regulators and resource managers. Species of concern were either listed as endangered or threatened under the Endangered Species Act or listed by States as species of concern in Natural Heritage Program checklists or State Wildlife Action Plans. All told, we determined that 357 species of concern likely occupy the Williston Basin. These species represented seven different taxonomic groups: plants (native and nonnative), terrestrial invertebrates, birds, mammals, reptiles and amphibians, and fish and mussels. We reviewed the existing scientific information pertaining to potential effects of energy development on these taxonomic groups. Currently, little is known about the abundance and distribution of many of these species. But some information exists that may be useful in predicting the potential effects of energy development on certain taxonomic groups. Most of this information has been developed through scientific research focused on effects to mammal and bird populations. Effects to other taxonomic groups seems to be understudied. In general, it seems that disturbances and modifications associated with development have the potential to negatively affect a wide range of species; however, many studies produce uncertain results because they are not designed to compare populations before and after energy development takes place. Most of these studies also do not monitor resources over multiple years and thus cannot detect population trends. Likewise, there are few examples of landscape-scale assessments of the cumulative effects of energy development that could be used for species or habitat management purposes. We suggest that more research needs to be completed to measure potential effects to a broad range of species in multiple taxonomic groups. This may require also developing some understanding about the basic ecology of many of the species covered in this report. In concert with this more basic research, we also suggest that more comprehensive assessments of potential negative cumulative effects across the Williston Basin should be developed in an effort to guide more strategic management of biological resources.

Montana, North Dakota, South Dakota↗

USGS2021

Characterization of water-resource threats and needs for U.S. Fish and Wildlife Service National Wildlife Refuges in the Legacy Mountain-Prairie Region, 2020

The U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service (FWS), began a study in 2019 to complete the compilation and quality assurance of water-resource threats and needs data for the 117 National Wildlife Refuges (NWRs) in the FWS Legacy Mountain-Prairie Region (LMPR) and to characterize the water-resource threats and needs of each refuge and of the LMPR itself. The LMPR encompasses the states of Colorado, Kansas, Montana, Nebraska, North Dakota, South Dakota, Utah, and Wyoming. This report includes the compilation and quality assurance of current (April 2020) water-resource threats and needs data for the refuges in the LMPR and a statistical, graphical, and spatial characterization, including the ranking and prioritization of threat types, threat causes, and needs by the number of occurrences in the LMPR as a whole and by refuges, states, and select U.S. Environmental Protection Agency Level III Ecoregions. A total of 540 unique threat occurrences were identified for 109 refuges in the LMPR. No threats were identified for eight refuges. About 43 percent of the threat occurrences, for 59 refuges, had a high-severity threat rating. Of the 10 most common threat types, 8 were also among the most common high-severity threat types. Water-resource threats had 72 different causes. About 83 percent of the overall common causes for threats and for high-severity threats were the same. The most common threat types overall and the most common high-severity threat types were compromised water management capability, habitat shifting/alteration, and altered flow regimes. The 20 water-resource threat types for Long Lake NWR were the most for refuges in the LMPR. Other refuges with the greatest number of threat types included Marais des Cygnes NWR (18) and Arapaho and Lee Metcalf NWRs (16 each). About 54 percent of refuges with threats had high-severity threats. Arapaho and Quivira NWRs each had 10 high-severity threat types, the maximum number of high-severity threat types for LMPR refuges. A total of 637 unique need occurrences were identified for 114 refuges. No needs were reported for three refuges. The most common need type, a Water Resource Inventory and Assessment, was reported for 78 refuges. Two of the most common need types, repair and replace water management infrastructure and water supply/quantity monitoring, were the most common high-priority need types. Bear River Migratory Bird Refuge had the most (39) unique water-resource need types for refuges in the LMPR. Other refuges with the greatest number of need types were Baca (38), Alamosa (36), and Monte Vista (36) NWRs. The most high-priority need types for a refuge was 23, at Monte Vista NWR. Alamosa (22), Baca (22), and Lake Andes (19) NWRs were also among the top 4 refuges with the greatest number of high-priority need types. An overall ranking scheme was developed to identify refuges that have the highest-ranking priority for conservation efforts to fulfill refuges’ statutory purposes. The count of occurrences of high-severity threats and high-priority needs were summed to determine the overall ranking value for a refuge. The 10 refuges with the highest overall ranking values, in order of ranking from higher to lower, were Alamosa, Baca, and Monte Vista NWRs (tied for highest); Lake Andes NWR, Ouray and Quivira NWRs, Bear River Migratory Bird Refuge and Flint Hills NWR, Cokeville Meadows NWR, and Arapaho NWR. About 33 percent of overall threat occurrences were reported as under the control of the FWS to mitigate, as were 37 percent of all threat occurrences with a high-severity rating. The most common overall threat types and high-severity threat types under FWS control were compromised water management capability; habitat shifting/alteration; altered flow regimes; loss/alteration of wetland habitat; and legal challenges or fines for non-compliance with water policy, law, or regulation. A total of 68 percent of overall need occurrences and 67 percent of all high-priority need occurrences were under the control of the FWS. The most common overall need types and high-priority needs types under control were repair or replace water management infrastructure, water supply/quantity monitoring, water quality baseline monitoring, and protect habitat from invasive species. A Water Resource Inventory and Assessment was also a common overall need under FWS control, as was the high-priority need of water level monitoring.

Colorado, Kansas, Montana, Nebraska, North Dakota,↗

USGS2025

Spatially resolved source apportionment of per- and polyfluoroalkyl substances (PFAS) within a post-industrial river catchment

Source apportionment of per- and polyfluoroalkyl substances (PFAS) in rivers is typically based on water concentrations, which cannot quantify PFAS loads or define geographical source areas. This study applied a river catchment-scale approach to identify PFAS source zones and assess the relative importance of industrial PFAS sources in the River Mersey, UK – a post-industrial, densely populated catchment with diverse PFAS sources. Synoptic sampling and PFAS river load analysis identified key sub-catchments and river stretches contributing the majority of PFAS. Notably, the highest PFAS concentrations did not always correspond to the greatest loads. Most PFOS (64 %), PFOA (49 %), 6:2FTS (46 %) and PFHxS (56 %) were exported from the Upper Mersey sub-catchment, despite higher concentrations in northern sub-catchments, emphasising the importance of load-based monitoring. Mass balance analysis of loads highlighted substantial inputs from specific river stretches, notably the Lower Irwell (Bolton to Manchester City Centre), River Tame (Marple Bridge to Stockport), and Upper Mersey (Stockport to Urmston). While PFAS loads generally scaled with catchment area, yield (load per unit area) analysis identified disproportionately high exports from small headwater catchments, notably the upper River Roch (PFOA, PFHpA and PFHxA) and Glaze Brook (PFBS). Industrial sources in these sub-catchments (a waste management facility and landfills, respectively) were confirmed using gadolinium anomaly analysis and consented discharge records. More widely, gadolinium data suggested industrial discharges may contribute to PFAS occurrence at 62 % of our sample sites throughout the catchment. These findings demonstrate that spatial analysis of PFAS loads, rather than concentrations alone, is critical for identifying PFAS source areas. We present a scalable monitoring framework for PFAS source apportionment applied at the river catchment-scale that can be used by environmental managers to target and prioritise PFAS source areas for detailed monitoring and remediation.

River Mersey↗

USGS2017

Methodological considerations for detection of terrestrial small-body salamander eDNA and implications for biodiversity conservation

Environmental DNA (eDNA) can be used as an assessment tool to detect populations of threatened species and provide fine-scale data required to make management decisions. The objectives of this project were to use quantitative PCR (qPCR) to: (i) detect spiked salamander DNA in soil, (ii) quantify eDNA degradation over time, (iii) determine detectability of salamander eDNA in a terrestrial environment using soil, faeces, and skin swabs, (iv) detect salamander eDNA in a mesocosm experiment. Salamander eDNA was positively detected in 100% of skin swabs and 66% of faecal samples and concentrations did not differ between the two sources. However, eDNA was not detected in soil samples collected from directly underneath wild-caught living salamanders. Salamander genomic DNA (gDNA) was detected in all qPCR reactions when spiked into soil at 10.0, 5.0, and 1.0 ng/g soil and spike concentration had a significant effect on detected concentrations. Only 33% of samples showed recoverable eDNA when spiked with 0.25 ng/g soil, which was the low end of eDNA detection. To determine the rate of eDNA degradation, gDNA (1 ng/g soil) was spiked into soil and quantified over seven days. Salamander eDNA concentrations decreased across days, but eDNA was still amplifiable at day 7. Salamander eDNA was detected in two of 182 mesocosm soil samples over 12 weeks ( n = 52 control samples; n = 65 presence samples; n = 65 eviction samples). The discrepancy in detection success between experiments indicates the potential challenges for this method to be used as a monitoring technique for small-bodied wild terrestrial salamander populations.

Molecular Ecology Resources↗

USGS2000

Compositing water samples for analysis of volatile organic compounds

Accurate mean concentrations of volatile organic compounds (VOCs) can easily and economically be obtained from a single VOC analysis by using proven methods of collecting representative, discrete water samples and compositing them with a gas-tight syringe. The technique can be used in conjunction with chemical analysis by a conventional laboratory, field-portable equipment, or a mobile laboratory. The type of mean concentration desired depends on the objectives of monitoring. For example, flow-weighted mean VOC concentrations can be used to estimate mass loadings in wastewater and urban storm water, and spatially integrated mean VOC concentrations can be used to assess sources of drinking water (e.g., reservoirs and rivers). The mean error in a discrete sample due to compositing is about 2% for most VOC concentrations greater than 0.1 ??g/L. The total error depends on the number of discrete samples comprising the composite sample and precision of the chemical analysis.Accurate mean concentrations of volatile organic compounds (VOCs) can easily and economically be obtained from a single VOC analysis by using proven methods of collecting representative, discrete water samples and compositing them with a gas-tight syringe. The technique can be used in conjunction with chemical analysis by a conventional laboratory, field-portable equipment, or a mobile laboratory. The type of mean concentration desired depends on the objectives of monitoring. For example, flow-weighted mean VOC concentrations can be used to estimate mass loadings in wastewater and urban storm water, and spatially integrated mean VOC concentrations can be used to assess sources of drinking water (e.g., reservoirs and rivers). The mean error in a discrete sample due to compositing is about 2% for most VOC concentrations greater than 0.1 ??g/L. The total error depends on the number of discrete samples comprising the composite sample and precision of the chemical analysis.Researchers are able to derive accurate values for the mean concentration of VOCs from a single VOC analysis using established techniques for the collection of representative, discrete water samples. Such samples are then composited with a gas-tight syringe. This methodology can be employed in conjunction with chemical assessment using a conventional laboratory, field-portable equipment, or a mobile laboratory. Estimates of mass loadings in wastewater and urban storm runoff can be generated using values for the flow-weighted mean VOC concentrations. Spatially integrated mean VOC concentrations are useful for the evaluation of drinking waters. Factors that influence the value for the total error are identified.

Journal of Environmental Engineering↗

USGS2006

Presence and distribution of wastewater-derived pharmaceuticals in soil irrigated with reclaimed water

Three sites in the Front Range of Colorado, USA, were monitored from May through September 2003 to assess the presence and distribution of pharmaceuticals in soil irrigated with reclaimed water derived from urban wastewater. Soil cores were collected monthly, and 19 pharmaceuticals, all of which were detected during the present study, were measured in 5‐cm increments of the 30‐cm cores. Samples of reclaimed water were analyzed three times during the study to assess the input of pharmaceuticals. Samples collected before the onset of irrigation in 2003 contained numerous pharmaceuticals, likely resulting from the previous year's irrigation. Several of the selected pharmaceuticals increased in total soil concentration at one or more of the sites. The four most commonly detected pharmaceuticals were erythromycin, carbamazepine, fluoxetine, and diphenhydramine. Typical concentrations of the individual pharmaceuticals observed were low (0.02–15 μg/kg dry soil). The existence of subsurface maximum concentrations and detectable concentrations at the lowest sampled soil depth might indicate interactions of soil components with pharmaceuticals during leaching through the vadose zone. Nevertheless, the present study demonstrates that reclaimed‐water irrigation results in soil pharmaceutical concentrations that vary through the irrigation season and that some compounds persist for months after irrigation.

Environmental Toxicology and Chemistry↗

USGS2002

Coastal geoindicators of environmental change in the humid tropics

The primary geoindicators appropriate for monitoring environmental changes in the humid tropics are transitory surface water levels, shoreline position, wetlands distribution, coral reefs, landforms, and sediment sequence and composition. Lateral zonations and temporal successions of vegetation also can be used as geoindicators of riverine and shoreline changes. All of these coastal geoindicators are sensitive to regional tectonic processes and anthropogenic alterations and they typically reflect significant changes in coastal conditions such as fluvial processes, coastal energy, water quality, relative sea level, and sediment supply. Where humid tropical coasts coincide with active tectonic margins, indicators of seismic activity are critical to understanding Coastal changes associated with co-seismic subsidence or uplift, tsunamis, and liquefaction of coastal sediments. Coastal landforms and sedimentary deposits that record late Quaternary environmental changes include perched fluvial and marine terraces, delta-plain morphologies, crevassesplay deposits, peats and other paleosols, beach ridges, mud capes, and mud volcanoes. Although these features and deposits typically reflect environmental changes spanning more than 100 years, they are relevant to modern processes, management of coastal lands and resources, and prediction of future conditions. In some regions of the humid tropics, large coastal areas are unaffected by hurricanes or typhoons. Nevertheless, these tropical coasts are vulnerable to other non-storm processes, such as El Nin??o events, tsunamis, and monsoons that increase water levels, and cause widespread flooding and beach erosion. The environmental and political significance of coastal geoindicators increases when they are integrated and applied to issues of human safety and health such as hazards mapping, risk assessment, and dispersion of contaminated sediments. However, to be relevant, those socio-environmental applications demand accurate predictions of future trends and rates of change.

Environmental Geology↗

USGS2013

A comprehensive change detection method for updating the National Land Cover Database to circa 2011

The importance of characterizing, quantifying, and monitoring land cover, land use, and their changes has been widely recognized by global and environmental change studies. Since the early 1990s, three U.S. National Land Cover Database (NLCD) products (circa 1992, 2001, and 2006) have been released as free downloads for users. The NLCD 2006 also provides land cover change products between 2001 and 2006. To continue providing updated national land cover and change datasets, a new initiative in developing NLCD 2011 is currently underway. We present a new Comprehensive Change Detection Method (CCDM) designed as a key component for the development of NLCD 2011 and the research results from two exemplar studies. The CCDM integrates spectral-based change detection algorithms including a Multi-Index Integrated Change Analysis (MIICA) model and a novel change model called Zone, which extracts change information from two Landsat image pairs. The MIICA model is the core module of the change detection strategy and uses four spectral indices (CV, RCVMAX, dNBR, and dNDVI) to obtain the changes that occurred between two image dates. The CCDM also includes a knowledge-based system, which uses critical information on historical and current land cover conditions and trends and the likelihood of land cover change, to combine the changes from MIICA and Zone. For NLCD 2011, the improved and enhanced change products obtained from the CCDM provide critical information on location, magnitude, and direction of potential change areas and serve as a basis for further characterizing land cover changes for the nation. An accuracy assessment from the two study areas show 100% agreement between CCDM mapped no-change class with reference dataset, and 18% and 82% disagreement for the change class for WRS path/row p22r39 and p33r33, respectively. The strength of the CCDM is that the method is simple, easy to operate, widely applicable, and capable of capturing a variety of natural and anthropogenic disturbances potentially associated with land cover changes on different landscapes.

Remote Sensing of Environment↗

USGS1996

Analysis of nutrients in the surface waters of the Georgia–Florida Coastal Plain study unit, 1970–91

During the early phase of the Georgia-Florida National Water Quality Assessment study, existing information on nutrients was compiled and analyzed in order to evaluate the nutrient concentrations within the 61,545 square mile study unit. Evaluation of the nutrient concentrations collected at surface-water sites between October 1, 1970, and September 30, 1991, utilized the environmental characteristics of land resource provinces, land use, and nonpoint and point-source discharges within the study unit. Long-term trends were investigated to determine the temporal distribution of nutrient concentrations. In order to determine a level of concern for nutrient concentrations, the U.S. Environmental Protection Agency (USEPA) guidelines were used: (1) for nitrate concentrations, the maximum contaminant level in public-drinking water supplies (10 mg/L); (2) for ammonia concentrations, the chronic exposure of aquatic organisms to un-ionized ammonia (2.1 mg/L); (3) for total-phosphorus concentrations, the recommended concentration in flowing water to discourage excessive growth of aquatic plants (0.1 mg/L); and (4) for kjeldahl concentrations, however, no guidelines were available. For sites within the 10 major river basins, median nutrient concentrations were enerally below USEPA guidelines, except for total-phosphorus concentrations where 45 percent of the medians exceeded the guideline. The only median ammonia concentration that exceeded the guideline occurred at the Swift Creek site (3.4 mg/L), in the Suwannee River basin, perhaps due to wastewater discharges. For all sites within the Withlacoochee, Aucilla, and St. Marys River basins, median concentrations of nitrate, ammonia, and total phosphorus were below the USEPA guidelines. Nutrient data at each monitoring site within each major basin were aggregated for comparisons of median nutrient concentrations among major basins. The Ochlockonee and Hillsborough River basins had the highest median nutrient concentrations, the Aucilla River basin had the lowest. Median concentrations of nitrate and ammonia among all major basins were below USEPA guidelines. The median total-phosphorus concentrations for the following river basins exceeded the USEPA guideline: Hillsborough, St. Johns, Suwannee, Ochlockonee, Satilla, Altamaha, and Ogeechee. Although nutrient concentrations within the study unit were low, long-term increasing trends were found in all four nutrients. All 18 study-unit wide nitrate trends had increasing slopes ranging from less than 0.01 to 0.07 (mg/L)/yr. The range in slope for the 13 ammonia trends was -0.03 to 0.01 (mg/L)/yr with 6 increasing trends in the northern part of the study unit. Of the 17 total-phosphorus trends found in the study unit, 10 were found at sites where the median concentration exceeded the USEPA guideline. At these 10 sites, 4 sites had increasing trends with slopes ranging from less than 0.01 to 0.07 (mg/L)/yr, 5 sites had decreasing trends with slopes ranging from -0.01 to -0.24 (mg/L)/yr, and one site showed a seasonal concentration trend. Median nutrient concentrations were significantly different among the four land resource provinces: Southern Piedmont, Southern Coastal Plain, Coastal Flatwoods, and Central Florida Ridge. As a result, nutrient concentrations among basins with similar nutrient inputs but located within different land resource provinces are not expected to be the same due to differences in the combination of factors such as soil permeability, runoff rates, and stream channel slopes. This concept is an important consideration in designing a surface-water quality network within the study area. For the most part, the Coastal Flatwoods showed the lowest median nutrient concentrations and the Southern Coastal Plain had the highest median nutrient concentrations. Lower median nitrate concentrations in surface-water basins were associated with the forest/wetland land-use category and higher median concentrations of nitrate and ammonia with the urban category when land-use percentages were classified into four land-use categories (agriculture, forest/wetland, mixed, and urban). These results were reasonable based on expected high nutrient inputs from urban areas and low inputs from forested and wetland areas. However, the lack of association between high nutrient concentrations and the agricultural land-use category was not expected since high nutrient inputs are generally needed for agriculture production.

Florida, Georgia↗

USGS2012

Prioritizing pesticide compounds for analytical methods development

The U.S. Geological Survey (USGS) has a periodic need to re-evaluate pesticide compounds in terms of priorities for inclusion in monitoring and studies and, thus, must also assess the current analytical capabilities for pesticide detection. To meet this need, a strategy has been developed to prioritize pesticides and degradates for analytical methods development. Screening procedures were developed to separately prioritize pesticide compounds in water and sediment. The procedures evaluate pesticide compounds in existing USGS analytical methods for water and sediment and compounds for which recent agricultural-use information was available. Measured occurrence (detection frequency and concentrations) in water and sediment, predicted concentrations in water and predicted likelihood of occurrence in sediment, potential toxicity to aquatic life or humans, and priorities of other agencies or organizations, regulatory or otherwise, were considered. Several existing strategies for prioritizing chemicals for various purposes were reviewed, including those that identify and prioritize persistent, bioaccumulative, and toxic compounds, and those that determine candidates for future regulation of drinking-water contaminants. The systematic procedures developed and used in this study rely on concepts common to many previously established strategies. The evaluation of pesticide compounds resulted in the classification of compounds into three groups: Tier 1 for high priority compounds, Tier 2 for moderate priority compounds, and Tier 3 for low priority compounds. For water, a total of 247 pesticide compounds were classified as Tier 1 and, thus, are high priority for inclusion in analytical methods for monitoring and studies. Of these, about three-quarters are included in some USGS analytical method; however, many of these compounds are included on research methods that are expensive and for which there are few data on environmental samples. The remaining quarter of Tier 1 compounds are high priority as new analytes. The objective for analytical methods development is to design an integrated analytical strategy that includes as many of the Tier 1 pesticide compounds as possible in a relatively few, cost-effective methods. More than 60 percent of the Tier 1 compounds are high priority because they are anticipated to be present at concentrations approaching levels that could be of concern to human health or aquatic life in surface water or groundwater. An additional 17 percent of Tier 1 compounds were frequently detected in monitoring studies, but either were not measured at levels potentially relevant to humans or aquatic organisms, or do not have benchmarks available with which to compare concentrations. The remaining 21 percent are pesticide degradates that were included because their parent pesticides were in Tier 1. Tier 1 pesticide compounds for water span all major pesticide use groups and a diverse range of chemical classes, with herbicides and their degradates composing half of compounds. Many of the high priority pesticide compounds also are in several national regulatory programs for water, including those that are regulated in drinking water by the U.S. Environmental Protection Agency under the Safe Drinking Water Act and those that are on the latest Contaminant Candidate List. For sediment, a total of 175 pesticide compounds were classified as Tier 1 and, thus, are high priority for inclusion in analytical methods available for monitoring and studies. More than 60 percent of these compounds are included in some USGS analytical method; however, some are spread across several research methods that are expensive to perform, and monitoring data are not extensive for many compounds. The remaining Tier 1 compounds for sediment are high priority as new analytes. The objective for analytical methods development for sediment is to enhance an existing analytical method that currently includes nearly half of the pesticide compounds in Tier 1 by adding as many additional Tier 1 compounds as are analytically compatible. About 35 percent of the Tier 1 compounds for sediment are high priority on the basis of measured occurrence. A total of 74 compounds, or 42 percent, are high priority on the basis of predicted likelihood of occurrence according to physical-chemical properties, and either have potential toxicity to aquatic life, high pesticide useage, or both. The remaining 22 percent of Tier 1 pesticide compounds were either degradates of Tier 1 parent compounds or included for other reasons. As with water, the Tier 1 pesticide compounds for sediment are distributed across the major pesticide-use groups; insecticides and their degradates are the largest fraction, making up 45 percent of Tier 1. In contrast to water, organochlorines, at 17 percent, are the largest chemical class for Tier 1 in sediment, which is to be expected because there is continued widespread detection in sediments of persistent organochlorine pesticides and their degradates at concentrations high enough for potential effects on aquatic life. Compared to water, there are fewer available benchmarks with which to compare contaminant concentrations in sediment, but a total of 19 Tier 1 compounds have at least one sediment benchmark or screening value for aquatic organisms. Of the 175 compounds in Tier 1, 77 percent have high aquatic-life toxicity, as defined for this process. This evaluation of pesticides and degradates resulted in two lists of compounds that are priorities for USGS analytical methods development, one for water and one for sediment. These lists will be used as the basis for redesigning and enhancing USGS analytical capabilities for pesticides in order to capture as many high-priority pesticide compounds as possible using an economically feasible approach.

Scientific Investigations Report↗

USGS2012

Geogenic sources of benzene in aquifers used for public supply, California

Statistical evaluation of two large statewide data sets from the California State Water Board's Groundwater Ambient Monitoring and Assessment Program (1973 wells) and the California Department of Public Health (12417 wells) reveals that benzene occurs infrequently (1.7%) and at generally low concentrations (median detected concentration of 0.024 μg/L) in groundwater used for public supply in California. When detected, benzene is more often related to geogenic (45% of detections) than anthropogenic sources (27% of detections). Similar relations are evident for the sum of 17 hydrocarbons analyzed. Benzene occurs most frequently and at the highest concentrations in old, brackish, and reducing groundwater; the detection frequency was 13.0% in groundwater with tritium <1 pCi/L, specific conductance >1600 μS/cm, and anoxic conditions. This groundwater is typically deep (>180 m). Benzene occurs somewhat less frequently in recent, shallow, and reducing groundwater; the detection frequency was 2.6% in groundwater with tritium ≥1 pCi/L, depth <30 m, and anoxic conditions. Evidence for geogenic sources of benzene include: higher concentrations and detection frequencies with increasing well depth, groundwater age, and proximity to oil and gas fields; and higher salinity and lower chloride/iodide ratios in old groundwater with detections of benzene, consistent with interactions with oil-field brines.

California↗

USGS2010

A Review of Land-Cover Mapping Activities in Coastal Alabama and Mississippi

INTRODUCTION Land-use and land-cover (LULC) data provide important information for environmental management. Data pertaining to land-cover and land-management activities are a common requirement for spatial analyses, such as watershed modeling, climate change, and hazard assessment. In coastal areas, land development, storms, and shoreline modification amplify the need for frequent and detailed land-cover datasets. The northern Gulf of Mexico coastal area is no exception. The impact of severe storms, increases in urban area, dramatic changes in land cover, and loss of coastal-wetland habitat all indicate a vital need for reliable and comparable land-cover data. Four main attributes define a land-cover dataset: the date/time of data collection, the spatial resolution, the type of classification, and the source data. The source data are the foundation dataset used to generate LULC classification and are typically remotely sensed data, such as aerial photography or satellite imagery. These source data have a large influence on the final LULC data product, so much so that one can classify LULC datasets into two general groups: LULC data derived from aerial photography and LULC data derived from satellite imagery. The final LULC data can be converted from one format to another (for instance, vector LULC data can be converted into raster data for analysis purposes, and vice versa), but each subsequent dataset maintains the imprint of the source medium within its spatial accuracy and data features. The source data will also influence the spatial and temporal resolution, as well as the type of classification. The intended application of the LULC data typically defines the type of source data and methodology, with satellite imagery being selected for large landscapes (state-wide, national data products) and repeatability (environmental monitoring and change analysis). The coarse spatial scale and lack of refined land-use categories are typical drawbacks to satellite-based land-use classifications. Aerial photography is typically selected for smaller landscapes (watershed-basin scale), for greater definition of the land-use categories, and for increased spatial resolution. Disadvantages of using photography include time-consuming digitization, high costs for imagery collection, and lack of seasonal data. Recently, the availability of high-resolution satellite imagery has generated a new category of LULC data product. These new datasets have similar strengths to the aerial-photo-based LULC in that they possess the potential for refined definition of land-use categories and increased spatial resolution but also have the benefit of satellite-based classifications, such as repeatability for change analysis. LULC classification based on high-resolution satellite imagery is still in the early stages of development but merits greater attention because environmental-monitoring and landscape-modeling programs rely heavily on LULC data. This publication summarizes land-use and land-cover mapping activities for Alabama and Mississippi coastal areas within the U.S. Geological Survey (USGS) Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazard Susceptibility Project boundaries. Existing LULC datasets will be described, as well as imagery data sources and ancillary data that may provide ground-truth or satellite training data for a forthcoming land-cover classification. Finally, potential areas for a high-resolution land-cover classification in the Alabama-Mississippi region will be identified.

Open-File Report↗

USGS2025

Direct effects of pesticides and other grassland management practices on the North American Monarch Butterfly (Danaus plexippus plexippus): A systematic review

This review synthesizes recent scientific literature on the effects of grassland management practices and pesticide applications on monarch butterflies ( Danaus plexippus ), focusing on studies published since the 2020 U.S. Fish and Wildlife Service Species Status Assessment (SSA). While the SSA highlighted habitat conservation efforts to enhance monarch populations, there has been limited empirical research on the direct effects of these management strategies on monarch survival and fitness. Following PRISMA guidelines, we conducted a systematic review to evaluate research published during and after the SSA (2019-2024) on the direct effects of common grassland management practices (mowing, grazing, burning, haying) and pesticides (herbicides, insecticides, fungicides) across monarch life stages. This search identified 29 studies that met our criteria. Of these, only two studies addressed the impacts of grassland management on monarchs, indicating a substantial and important information gap. The other 27 studies reviewed indicate significant risks of pesticide exposure to monarchs, particularly at immature life stages from lethal and sublethal effects. The effects of chronic insecticide exposure, particularly neonicotinoids, are especially critical to consider, as research shows insecticides can result in impairment of growth, development, and reproductive behaviors. Additionally, fungicides pose overlooked risks to monarchs due to their toxicity to non-target organisms. Notably, most studies evaluating pesticide effects were conducted in a laboratory setting and thus it is unclear how these results relate to fieldrealistic exposure, as well as exposure over multiple life history stages and potential synergistic effects of pesticides. Additional relevant information gaps remain, especially on studies of southern migratory paths critical for monarch population persistence. Data gaps at relevant scales for grassland management combined with growing evidence of pesticide persistence and subsequent threats to insects, highlight how more ecologically applicable metrics for monitoring environmental chemicals could help improve understanding of the effects of pesticides on monarchs and characterize contamination of milkweed and nectar resources.

Cooperator Science Series↗

USGS2022

Using a vegetation index to assess wetland condition in the Prairie Pothole Region of North America

Wetlands deliver a suite of ecosystem services to society. Anthropogenic activities, such as wetland drainage, have resulted in considerable wetland loss and degradation, diminishing the intrinsic value of wetland ecosystems worldwide. Protecting remaining wetlands and restoring degraded wetlands are common management practices to preserve and reclaim wetland benefits to society. Accordingly, methods for monitoring and assessing wetlands are required to evaluate their ecologic condition and outcomes of restoration activities. We used an established methodology for conducting vegetation-based assessments and describe a case study consisting of a wetland condition assessment in the Prairie Pothole Region of the North American Great Plains. We provide an overview of an existing method for selecting wetlands to sample across broad geographic distributions using a spatially balanced statistical design. We also describe site assessment protocols, including vegetation survey methods, and how field data were applied to a vegetation index that categorized wetlands according to ecologic condition. Results of the case study indicated that vegetation communities in nearly 50% of the surveyed wetlands were in very poor or poor condition, while only about 25% were considered good or very good . Approximately 70% of wetlands in native grasslands were categorized as good or very good compared to only 12% of those in reseeded grasslands (formerly cropland). In terms of informing restoration and management activities, results indicated that improved restoration practices could include a greater focus on establishing natural vegetation communities, and both restored and native prairie wetlands would benefit from enhanced management of invasive species.

Prairie Pothole Region↗

USGS2023

New indicators of ecological resilience and invasion resistance to support prioritization and management in the sagebrush biome, United States

Ecosystem transformations to altered or novel ecological states are accelerating across the globe. Indicators of ecological resilience to disturbance and resistance to invasion can aid in assessing risks and prioritizing areas for conservation and restoration. The sagebrush biome encompasses parts of 11 western states and is experiencing rapid transformations due to human population growth, invasive species, altered disturbance regimes, and climate change. We built on prior use of static soil moisture and temperature regimes to develop new, ecologically relevant and climate responsive indicators of both resilience and resistance. Our new indicators were based on climate and soil water availability variables derived from process-based ecohydrological models that allow predictions of future conditions. We asked: (1) Which variables best indicate resilience and resistance? (2) What are the relationships among the indicator variables and resilience and resistance categories? (3) How do patterns of resilience and resistance vary across the area? We assembled a large database ( n = 24,045) of vegetation sample plots from regional monitoring programs and derived multiple climate and soil water availability variables for each plot from ecohydrological simulations. We used USDA Natural Resources Conservation Service National Soils Survey Information, Ecological Site Descriptions, and expert knowledge to develop and assign ecological types and resilience and resistance categories to each plot. We used random forest models to derive a set of 19 climate and water availability variables that best predicted resilience and resistance categories. Our models had relatively high multiclass accuracy (80% for resilience; 75% for resistance). Top indicator variables for both resilience and resistance included mean temperature, coldest month temperature, climatic water deficit, and summer and driest month precipitation. Variable relationships and patterns differed among ecoregions but reflected environmental gradients; low resilience and resistance were indicated by warm and dry conditions with high climatic water deficits, and moderately high to high resilience and resistance were characterized by cooler and moister conditions with low climatic water deficits. The new, ecologically-relevant indicators provide information on the vulnerability of resources and likely success of management actions, and can be used to develop new approaches and tools for prioritizing areas for conservation and restoration actions.

Frontiers in Ecology and Evolution↗

USGS2019

Influence of season, sex, age and diet composition on mercury concentration in Walleye Sander vitreus

We collected Walleye Sander vitreus (May–October) from Bitter and Twin lakes, South Dakota to assess seasonal- and diet-related variation in tissue mercury (Hg) concentration. The average Hg concentration in Walleye was 43–68% higher in the spring for Bitter ( p < 0.008) and Twin Lakes ( p < 0.017) compared with summer or autumn months. Bioenergetics analysis of Bitter Lake Walleye showed that consumption of fish prey (primarily Fathead Minnow Pimephales promelas ) increased from late summer through winter and was linked to increased Hg accumulation in Walleye the following spring. Mercury concentration varied significantly with Walleye age but was similar for comparably-aged male (0.62 μg/g) and female fish (0.62 μg/g). However, after adjusting for Walleye size (total length, mm), mean Hg concentration was greater in male (0.66 μg/g) compared with female (0.50 μg/g) fish, likely due to slower growth rate of male Walleye. At 425 mm, male Walleye in Bitter Lake were approximately 1 year older than female fish. These findings show that diet, age, and gender-related growth affect Hg concentration in Walleye and are important factors to consider in fish contaminant monitoring programs.

South Dakota↗

USGS1998

Contribution of hydroxylated atrazine degradation products to the total atrazine load in midwestern streams

The contribution of hydroxylated atrazine degradation products (HADPs) to the total atrazine load (i.e., atrazine plus stable metabolites) in streams needs to be determined in order to fully assess the impact of atrazine contamination on stream ecosystems and human health. The objectives of this study were (1) to determine the contribution of HADPs to the total atrazine load in streams of nine midwestern states and (2) to discuss the mechanisms controlling the concentrations of HADPs in streams. Stream samples were collected from 95 streams in northern Missouri at preplant and postplant of 1994 and 1995, and an additional 46 streams were sampled in eight midwestern states at postplant of 1995. Samples were analyzed for atrazine, deethylatrazine (DEA), deisopropylatrazine (DIA), and three HADPs. Overall, HADP prevalence (i.e., frequency of detection) ranged from 87 to 100% for hydroxyatrazine (HA), 0 to 58% for deethylhydroxyatrazine (DEHA), and 0% for deisopropylhydroxyatrazine (DIHA) with method detection limits of 0.04−0.10 μg L -1 . Atrazine metabolites accounted for nearly 60% of the atrazine load in northern Missouri streams at preplant, with HA the predominant metabolite present. Data presented in this study and a continuous monitoring study are used to support the hypothesis that a combination of desorption from stream sediments and dissolved-phase transport control HADP concentrations in streams.

Environmental Science & Technology↗