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USGS2025

Bright spots for advancing ecological understanding and conservation decision-making

A lot can be learned by studying bright spots—defined as unexpected positive outcomes. In fields like public health, education, and oncology, identifying factors behind bright spots reveals previously unknown drivers of success that can be replicated elsewhere. This concept is being applied in conservation but is hampered by variations in definitions of bright spots and confusion with hotspots—sites with high absolute values of a metric. We developed a framework to clearly define and distinguish between hotspots (e.g., a wetland with high plant diversity) and bright spots (e.g., a biodiverse wetland in a housing development), which outperform conservation expectations. The framework is an iterative cycle, consisting of setting expectations for relative comparisons, classifying systems into bright, dark, hot, and cold categories, and digging deeper to reveal hidden mechanisms and opportunities for intervention. We drew on examples from diverse fields to demonstrate how our framework can generate new knowledge, identify potential interventions, and inform management priorities. Defining conservation and management expectations, often through predictive models, is essential to understanding drivers of success and fosters hypotheses about overlooked factors. Our framework can enhance ecological understanding, guide interventions, and help prioritize actions in conservation and natural resource management.

Conservation Biology↗
USGS2025

Rapid Holocene deposition in the Mackenzie Trough and Barrow Canyon areas in the western Arctic Ocean

The Arctic Ocean and terrestrial environment have recently been reported to be changing drastically, but it is unclear whether these changes are similar to natural variations in the past or how sudden and large the changes are compared to natural variations. This premise served as motivation to collect sediment cores during the summer of 2022 at four sites on the Canadian continental shelf and Alaskan upper continental slope to reconstruct changes in the marine and terrestrial environments to provide a comprehensive picture of the ocean environment during the preindustrial period before anthropogenic influences. We dated the sediments based on the 137 Cs radioactivity of bulk sediments and the 14 C concentrations of mollusk shells. The 137 Cs radioactivity shows a distinct onset corresponding to 1950 Common Era (CE) and the most prominent peak corresponding to 1963 CE. Multiple peaks appeared above the most prominent one, coinciding with nuclear power plant accidents in 1986 and 2011. Inventories of excess 210 Pb in all cores exceed the estimated supply of excess 210 Pb from atmospheric deposition, likely due to the scavenging supply of excess 210 Pb. By comparing 137 Cs and radiocarbon conventional ages, we estimated the local radiocarbon reservoir age value of each site. Using these local radiocarbon reservoir age and the conventional ages of mollusk shell samples, we established the age-depth models by the Bayesian method. The optimal ΔR values were 598, 511, 65, and –60 years at the MT1, MT2, BC2, and BC2-2 sites, respectively. The cores consist of clayey silts continuously deposited with uniquely high sedimentation rates of 0.17 to 0.74 cm y −1 . Variation in the Ca/Ti ratio indicates ~ 20, ~ 30, 50–60, 100–125, and 300-year cycles, likely attributed to the variation in the Aleutian Low that controls the Bering Strait inflow of Pacific waters influencing our core sites. These sediments will be used for further high-resolution, multi-proxy studies with forthcoming results.

western Arctic Ocean↗
USGS2009

Character and Trends of Water Quality in the Blue River Basin, Kansas City Metropolitan Area, Missouri and Kansas, 1998 through 2007

Water-quality and ecological character and trends in the metropolitan Blue River Basin were evaluated from 1998 through 2007 to provide spatial and temporal resolution to factors that affect the quality of water and biota in the basin and provide a basis for assessing the efficacy of long-term combined sewer control and basin management plans. Assessments included measurements of stream discharge, pH, dissolved oxygen, specific conductance, turbidity, nutrients (dissolved and total nitrogen and phosphorus species), fecal-indicator bacteria (Escherichia coli and fecal coliform), suspended sediment, organic wastewater and pharmaceutical compounds, and sources of these compounds as well as the quality of stream biota in the basin. Because of the nature and myriad of factors that affect basin water quality, multiple strategies are needed to decrease constituent loads in streams. Strategies designed to decrease or eliminate combined sewer overflows (CSOs) would substantially reduce the annual loads of nutrients and fecal-indicator bacteria in Brush Creek, but have little effect on Blue River loadings. Nonpoint source reductions to Brush Creek could potentially have an equivalent, if not greater, effect on water quality than would CSO reductions. Nonpoint source reductions could also substantially decrease annual nutrient and bacteria loadings to the Blue River and Indian Creek. Methods designed to decrease nutrient loads originating from Blue River and Indian Creek wastewater treatment plants (WWTPs) could substantially reduce the overall nutrient load in these streams. For the main stem of the Blue River and Indian Creek, primary sources of nutrients were nonpoint source runoff and WWTPs discharges; however, the relative contribution of each source varied depending on how wet or dry the year was and the number of upstream WWTPs. On Brush Creek, approximately two-thirds of the nutrients originated from nonpoint sources and the remainder from CSOs. Nutrient assimilation processes, which reduced total nitrogen loads by approximately 13 percent and total phosphorus loads by double that amount in a 20-kilometer reach of the Blue River during three synoptic base-flow sampling events between August through September 2004 and September 2005, likely are limited to selected periods during any given year and may not substantially reduce annual nutrient loads. Bacteria densities typically increased with increasing urbanization, and bacteria loadings to the Blue River and Indian Creek were almost entirely the result of nonpoint source runoff. WWTPs contributed, on average, less than 1 percent of the bacteria to these reaches, and in areas of the Blue River that had combined sewers, CSOs contributed only minor amounts (less than 2 percent) of the total annual load in 2005. The bulk of the fecal-indicator bacteria load in Brush Creek also originated from nonpoint sources with the remainder from CSOs. From October 2002 through September 2007, estimated daily mean Escherichia coli bacteria density in upper reaches of the Blue River met the State of Missouri secondary contact criterion standard approximately 85 percent of the time. However, in lower Blue River reaches, the same threshold was exceeded approximately 45 percent of the time. The tributary with the greatest number of CSO discharge points, Brush Creek, contributed approximately 10 percent of the bacteria loads to downstream reaches. The tributary Town Fork Creek had median base-flow Escherichia coli densities that were double that of other basin sites and stormflow densities 10 times greater than those in other parts of the basin largely because approximately one-fourth of the runoff in the Town Fork Creek Basin is believed to originate in combined sewers. Genotypic source typing of bacteria indicated that more than half of the bacteria in this tributary originated from human sources with two storms contributing the bulk of all bacteria sourced as human. However, areas outsid

Scientific Investigations Report↗
USGS2017

USA National Phenology Network’s volunteer-contributed observations yield predictive models of phenological transitions

In support of science and society, the USA National Phenology Network (USA-NPN) maintains a rapidly growing, continental-scale, species-rich dataset of plant and animal phenology observations that with over 10 million records is the largest such database in the United States. Contributed voluntarily by professional and citizen scientists, these opportunistically collected observations are characterized by spatial clustering, inconsistent spatial and temporal sampling, and short temporal depth. We explore the potential for developing models of phenophase transitions suitable for use at the continental scale, which could be applied to a wide range of resource management contexts. We constructed predictive models of the onset of breaking leaf buds, leaves, open flowers, and ripe fruits – phenophases that are the most abundant in the database and also relevant to management applications – for all species with available data, regardless of plant growth habit, location, geographic extent, or temporal depth of the observations. We implemented a very basic model formulation - thermal time models with a fixed start date. Sufficient data were available to construct 107 individual species × phenophase models. Of these, fifteen models (14%) met our criteria for model fit and error and were suitable for use across the majority of the species’ geographic ranges. These findings indicate that the USA-NPN dataset holds promise for further and more refined modeling efforts. Further, the candidate models that emerged could be used to produce real-time and short-term forecast maps of the timing of such transitions to directly support natural resource management.

PLoS ONE↗
USGS2011

Sources, fate, and transport of nitrogen and phosphorus in the Chesapeake Bay watershed: An empirical model

Spatially Referenced Regression on Watershed Attributes (SPARROW) was used to provide empirical estimates of the sources, fate, and transport of total nitrogen (TN) and total phosphorus (TP) in the Chesapeake Bay watershed, and the mean annual TN and TP flux to the bay and in each of 80,579 nontidal tributary stream reaches. Restoration efforts in recent decades have been insufficient to meet established standards for water quality and ecological conditions in Chesapeake Bay. The bay watershed includes 166,000 square kilometers of mixed land uses, multiple nutrient sources, and variable hydrogeologic, soil, and weather conditions, and bay restoration is complicated by the multitude of nutrient sources and complex interacting factors affecting the occurrence, fate, and transport of nitrogen and phosphorus from source areas to streams and the estuary. Effective and efficient nutrient management at the regional scale in support of Chesapeake Bay restoration requires a comprehensive understanding of the sources, fate, and transport of nitrogen and phosphorus in the watershed, which is only available through regional models. The current models, Chesapeake Bay nutrient SPARROW models, version 4 (CBTN_v4 and CBTP_v4), were constructed at a finer spatial resolution than previous SPARROW models for the Chesapeake Bay watershed (versions 1, 2, and 3), and include an updated timeframe and modified sources and other explantory terms. Chesapeake Bay receives an estimated 1.32 x 10 8 kilograms (132,000 metric tons) of nitrogen and 9.74 x 10 6 kilograms (9,740 metric tons) of phosphorus annually from its watershed, mainly through its two largest tributaries, the Susquehanna and Potomac Rivers. Significant (α=0.10) sources of nutrients to streams in the watershed include fertilizer and manure applications in agricultural areas, undifferentiated urban activities, point sources, atmospheric deposition and direct fixation by crops (for nitrogen), and mineral sources (for phosphorus). Agriculture (primarily fertilizer applications and crop fixation) contributes more than half of the nitrogen delivered from the watershed to the bay; phosphorus contributions are more mixed, and fairly evenly distributed among agricultural (fertilizer and manure applications) and urban (including point) sources. Natural mineral dissolution contributes approximately 14 percent of the phosphorus flux from the watershed to the Chesapeake Bay. Empirical estimates of average yields from different source areas and of the portion of selected applications delivered to streams agree closely with previously reported values in the literature. Nutrient fate and transport through the Chesapeake Bay watershed to the bay reflect the diferent physical and chemical properties of nitrogen and phosphorus compounds. Groundwater is an important pathway for nitrogen transport (as nitrate), and TN flux is greatest in areas with greater groundwater flow and in areas of the Piedmont underlain by carbonate rocks. TN flux decreases with increasing vegetative growth (likely indicative of plant uptake) and soil available water capacity (likely indicative of reducing conditions). Phosphorus transport to streams, conversely, is greatest in areas most likely to generate overland runoff and related erosion, including those with less permeable and more erodible soils and greater precipitation. Phosphorus transport also is greater in the Coastal Plain than in other areas, possibly due to saturation of soils with historical phosphorus applications. Both nitrogen and phosphorus are lost within watershed impoundments (lakes, ponds, or reservoirs), and nitrogen is also lost significantly along flowing reaches, particularly in small streams and in larger streams in warmer areas.

Chesapeake Bay↗
USGS1983

Ground-water contamination at Wurtsmith Air Force Base, Michigan

A sand and gravel aquifer of glacial origin underlies Wurtsmith Air Force Base in northeastern lower Michigan. The aquifer overlies a thick clay layer at an average depth of 65 feet. The water table is about 10 feet below land surface in the western part of the Base and about 25 feet below land surface in the eastern part. A ground-water divide cuts diagonally across the Base from northwest to southeast. South of the divide, ground water flows to the Au Sable River; north of the divide, it flows to Van Etten Creek and Van Etten Lake. Mathematical models were used to aid in calculating rates of groundwater flow. Rates range from about 0.8 feet per day in the eastern part of the Base to about 0.3 feet per day in the western part. Models also were used as an aid in making decisions regarding purging of contaminated water from the aquifer. In 1977, trichloroethylene was detected in the Air Force Base water-supply system. It had leaked from a buried storage tank near Building 43 in the southeastern part of the Base and moved northeastward under the influence of the natural ground-water gradient and the pumping of Base water-supply wells. In the most highly contaminated part of the plume, concentrations are greater than 1,000 micrograms per liter. Current purge pumping is removing some of the trichloroethylene, and seems to have arrested its eastward movement. Pumping of additional purge wells could increase the rate of removal. Trichloroethylene has also been detected in ground water in the vicinity of the Base alert apron, where a plume from an unknown source extends northeastward off Base. A smaller, less well-defined area of contamination also occurs just north of the larger plume. Trichloroethylene, identified near the waste-treatment plant, seepage lagoons, and the northern landfill area, is related to activities and operations in these areas. Dichloroethylene and trichloroethylene occur in significant quantities westward of Building 43, upgradient from the major spill site. Benzene, indicative of ground-water contamination by a fuel substance, occurs in an area northeast of the bulk-fuel storage area. Analysis of a variety of chemical, physical, and biologic characteristics of water on the Base indicate that there is a measurable affect on ground-water quality from landfills, the seepage lagoon, and the waste-treatment plant.

Michigan↗
USGS1994

Conservation reserve program: benefit for grassland birds in the northern plains

During the past few decades numbers of some species of upland-nesting birds in North America have declined. Duck species such as mallard (Anas platyrhynchos), northern pintail (A. acuta) and blue-winged teal (A. discors) have declined since the early 1970s and have remained low since 1985 (Caithamer et al. 1993). Some grassland-dependent nonwaterfowl species also have declined since 1966, as indicated by the North American Breeding Bird Survey (BBS) (Robbins et al. 1986). For prairie-nesting ducks, population declines can be attributed mostly to low recruitment, partially as a result of low nest success. Klett et al. (1988) concluded that nest success (probability of ≥1 egg of clutch hatches) in much of the U.S. Prairie Pothole Region was inadequate to maintain populations of the five most common upland-nesting duck species studied, and that predators were the most important cause of nest failure. Over the years, as grassland areas have been converted to cropland, ducks have concentrated their nesting in the remaining areas of available habitat, where predators such as red fox (Vulpes vulpes), striped skunk (Mephitis mephitis) and badger (Taxidea taxus) forage (Cowardin et al. 1983). The reasons for declining populations of grassland nonwaterfowl birds are not clear but the loss of suitable grassland-nesting habitat probably is an important factor. Currently, approximately 95 percent of the land in North Dakota is used for agricultural purposes, of which over 60 percent is used for annual crop production (Haugse 1990). Of the grassland that remains, 95 percent is used for livestock production. This probably had a severe impact on grassland bird species that seek idle grass cover for nesting. The 1985 and 1990 U.S. Farm Bills include provisions under the Food Security Act to fund a cropland-idling program called the Conservation Reserve Program (CRP). Over 36 million acres have been enrolled nationwide in the CRP since 1985 (Osborn 1993), and up to 25 percent of cropland in some counties has been converted primarily to grass. In North Dakota, nearly 3 million acres have been enrolled. Over 90 percent of the CRP plantings in North Dakota are grass and grass-legume mix composed primarily of wheatgrass (Agropyron spp.), smooth brome (Bromus inermis), alfalfa (Medicago saliva) and sweetclover (Melilotus spp.). Mixes of these species have been reported to attract high densities of nesting ducks (Duebbert and Kantrud 1974). According to the CRP provisions, the land must remain idle for the 10-year contract period, with the exception of emergency provisions for haying or grazing. CRP appears to have great potential for benefiting many species of grassland-nesting birds. There have been efforts to document the importance of the CRP to migratory birds in the Upper Great Plains of the U.S. Kantrud (1993) studied duck nest success in CRP cover and concluded that nest success was higher than in planted cover on U.S. Fish and Wildlife Service (FWS) Waterfowl Production Areas (WPAs). Johnson and Schwartz (1993a) measured the use of CRP fields by nonwaterfowl birds and reported that several species have responded positively by colonizing CRP fields. They concluded that CRP has the potential to help reverse the population declines of several species. We investigated the importance of CRP to upland-nesting ducks and certain other grassland-nesting birds. For ducks, we compared nest success in CRP cover with nest success in planted cover on WPAs in the same period (1992-93) and with that of an earlier period (1980-84). For nonwaterfowl, we used BBS data to compare the trends in populations of certain species found in CRP, for the periods 1966-86 (pre-CRP cover establishment) and 1987-92 (post-CRP cover establishment) in North Dakota.

North Dakota, South Dakota↗
USGS1980

The natural food habits of grizzly bears in Yellowstone National Park, 1973-74

The natural food habits of grizzly bears ( Ursus arctos horribilis Ord) in Yellowstone National Park were investigated in 1973-74 to identify the grizzly's energy sources and trophic level(s), nutrient use, and distribution. Food consumption was determined by scat analysis and field observations. Food quality and digestibility were estimated by chemical analysis. Grizzlies were distributed in 3 distinctive feeding economies: valley / plateau , a grass/rodent economy where grizzlies were intensive diggers; mountain , primarily a grass/springbeauty/root economy where grizzlies were casual diggers; and lake , primarily a fish/grass economy where grizzlies were fishers. The economies occurred in areas with fertile soils; distribution of bears within each was related to the occurrence of succulent plants. The feeding cycle in the valley/plateau and mountain economies followed plant phenology. Grizzlies fed primarily on meat before green-up and on succulent herbs afterwards; meat, corms, berries, and nuts became important during the postgrowing season. Succulent grasses and sedges with an importance value percentage of 78.5 were the most important food items consumed. Protein from animal tissue was more digestible than protein from plant tissue. Storage fats were more digestible than structural fats. Food energy and digestibility were directly related. Five principle nutrient materials (listed with their percentage digestibilities) contributed to total energy intake: protein from succulent herbs, 42.8; protein and fat from animal material, 78.1; fat and protein from pine nuts, 73.6; starch, 78.8; and sugar from berries and fruits, digestibility undetermined. Protein from succulent herbs, with a nutritive value percentage of 77.3, was the grizzlies' primary energy source. Because succulent, preflowering herbs had higher protein levels than dry, mature herbs, grizzly use of succulent herbs guaranteed them the highest source of herbaceous protein. Low protein digestibility of succulent herbs was compenstated for by high intake. Grizzlies were digestively flexible and maximized use of protein from plant and animal sources. They were adapted to the most constant and abundant sources of protein: succulent herbs and animal material from open, fertile grasslands. Competition among grizzlies for animal food during the pregrowing season may be regulatory for the grizzly population. The grizzly population level can be partially accounted for by the grizzlies' status as secondary consumers during pregreen-up periods and primary consumers during the growing and postgrowing seasons. The essential environmental requirement was the availability of fertile grasslands and herblands interspersed with cover and capable of maintaining artiodactyls, rodents, and abundant nutritious herbs as sources of food.

Yellowstone National Park↗
USGS2021

Environmental factors predicting the orientation of sea turtle hatchlings on a naturally lighted beach: A baseline for light-management goals

On sea turtle nesting beaches, artificial lighting associated with human development interferes with hatchling orientation from nest to sea. Although hatchling disorientation has been documented for many beaches, data that managers can use in understanding, predicting, and managing the issue are of limited detail. The present study provides baseline hatchling orientation data that can be compared to those from beaches with artificial lighting to prioritize light-management efforts there. In 2014, the precision of hatchling orientation was quantified for 87 nests on a naturally lighted beach that had little to no artificial lighting. Precision of hatchling orientation was regressed against seven environmental variables: beach slope, distance from nest to dune, dune height, apparent dune silhouette height relative to nest site, moon illumination percentage, cloud cover percentage, and relative humidity. Results favored a regression model that included distance from nest to dune, with shorter distances from the dune predicting a narrower angular range (i.e., greater precision) of hatchling orientation. The study confirmed findings of an earlier laboratory experiment that highlighted the importance to accurate hatchling orientation of a dark silhouette (dune) on the side of the nest site opposite the ocean side. Reducing artificial light and promoting the planting of pioneer plants that assist dune formation can increase hatchling survival.

Florida↗
USGS2014

Hurricane Sandy: observations and analysis of coastal change

Hurricane Sandy, the largest Atlantic hurricane on record, made landfall on October 29, 2012, and impacted a long swath of the U.S. Atlantic coastline. The barrier islands were breached in a number of places and beach and dune erosion occurred along most of the Mid-Atlantic coast. As a part of the National Assessment of Coastal Change Hazards project, the U.S. Geological Survey collected post-Hurricane Sandy oblique aerial photography and lidar topographic surveys to document the changes that occurred as a result of the storm. Comparisons of post-storm photographs to those collected prior to Sandy’s landfall were used to characterize the nature, magnitude, and spatial variability of hurricane-induced coastal changes. Analysis of pre- and post-storm lidar elevations was used to quantify magnitudes of change in shoreline position, dune elevation, and beach width. Erosion was observed along the coast from North Carolina to New York; however, as would be expected over such a large region, extensive spatial variability in storm response was observed.

Open-File Report↗
USGS2020

Forage and habitat for pollinators in the northern Great Plains—Implications for U.S. Department of Agriculture conservation programs

Managed and wild pollinators are critical components of agricultural and natural systems. Despite the well-known value of insect pollinators to U.S. agriculture, Apis mellifera (Linnaeus, 1758; honey bees) and wild bees currently face numerous stressors that have resulted in declining health. These declines have engendered support for pollinator conservation efforts across all levels of government, private businesses, and nongovernmental organizations. In 2014, the U.S. Department of Agriculture (USDA) and the U.S. Geological Survey initiated an interagency agreement to evaluate honey bee forage across multiple States in the northern Great Plains and upper Midwest. The long-term goal of this study was to provide an empirical evaluation of floral resources used by honey bees, and the relative contribution of multiple land covers and USDA conservation programs to bee health and productivity. Our multi-State analysis of land-use change from 2006 to 2016 revealed loss of grassland and increases in corn and soybean area in North and South Dakota, representing a significant loss of bee-friendly land covers in areas that support the highest density of summer bee yards in the entire United States. Our landscape models demonstrate the importance of the Conservation Reserve Program in providing safe locations for beekeepers to keep honey bees during the summer and highlights how land use in the northern Great Plains has a lasting effect on the health of honey bee colonies during almond pollination the subsequent spring. Our multiseason, multi-State genetic analysis of honey bee-collected pollen revealed Melilotus spp., Asteraceae, Trifolium spp., Fabaceae, Sonchus arvensis , Symphyotrichum cordifolium , and Solidago spp. were the top taxa detected; Melilotus spp. represented 42 percent of all detected taxa. Symphyotrichum cordifolium , Solidago spp., and Grindelia spp. were the top native forbs detected in honey bee-collected pollen. We also conducted plant and bee surveys on private lands enrolled in the Conservation Reserve Program and Environmental Quality Incentives Program. In general, we found significant variability in floral resources and pollinator utilization across USDA programs and practices. On average, greater than 75 percent of honey bee flower observations on private lands enrolled in a USDA conservation program were on non-native forbs, whereas 33 percent of wild bee flower observations were on non-native forbs. Melilotus officinalis and Medicago sativa were the most visited by honey bees, wherease Medicago sativa and Helianthus maximiliani were the most visited by wild bees. Our analysis of nectar dearth periods in June and September for honey bees revealed that although Melilotus officinalis and Medicago sativa were highly visited, less common native forb species such as Ratibida columnifera , Agastache foeniculum , and Gaillardia aristata were preferred species. However, these preferred species were relatively rare on the landscape and are, therefore, unlikely to make up a sizable part of the honey bee diet. In addition to our empirical results, we also showcase how the U.S. Geological Survey Pollinator Library, a decision-support tool for natural resource managers, can be used to design cost-effective seeding mixes for pollinators. Collectively, the results of this research will assist USDA with maximizing the ecological impact and cost-effectiveness of their conservation programs on pollinators in the northern Great Plains.

Minnesota, North Dakota, South Dakota↗
USGS2024

Chronic effects of metal releases from historical mining on threatened crayfish in Madison County Missouri, USA

The Little St. Francis River and its tributaries drain metals-contaminated areas of the Madison County Mines National Priority List Superfund site (MCM) which was designated in 2003 to facilitate remediation of metals contamination within the MCM. One concern for natural resource trustees in the MCM is the potential effects of elevated metals concentrations on the federally threatened St. Francis River crayfish, Faxonius quadruncus , which has a geographic range that is limited to the St. Francis River watershed. A survey of riffle-dwelling crayfish, in-situ cage study, and laboratory toxicity tests were conducted to assess the effects of mining-derived metals on F. quadruncus and other crayfish species in the MCM. Crayfish densities were significantly greater at sites upstream of metals releases from historical mining (henceforth mining releases) compared to densities at sites downstream of mining releases, and metals concentrations in whole-body crayfish, surface water, sediments, macroinvertebrates, fish, and plant material were greater at sites downstream of mining releases compared to sites upstream of mining releases. Crayfish densities were also negatively correlated with consensus-based adverse effects indices, expressed as surface-water toxic units and sediment probable effects quotients. Decreased growth and increased mortality during cage and laboratory studies were likely due to exposure to, and subsequently uptake of, elevated concentrations of metals. Crayfish in all studies were found to bioaccumulate metals, which supports their utility as bioindicators of metals contamination. Study results show that elevated metals concentrations associated with mining releases in the MCM continue to adversely affect biota, including the federally threatened F. quadruncus .

Missouri↗
USGS2010

Prescribed fires as ecological surrogates for wildfires: A stream and riparian perspective

Forest managers use prescribed fire to reduce wildfire risk and to provide resource benefits, yet little information is available on whether prescribed fires can function as ecological surrogates for wildfire in fire-prone landscapes. Information on impacts and benefits of this management tool on stream and riparian ecosystems is particularly lacking. We used a beyond-BACI (Before, After, Control, Impact) design to investigate the effects of a prescribed fire on a stream ecosystem and compared these findings to similar data collected after wildfire. For 3 years after prescribed fire treatment, we found no detectable changes in periphyton, macroinvertebrates, amphibians, fish, and riparian and stream habitats compared to data collected over the same time period in four unburned reference streams. Based on changes in fuels, plant and litter cover, and tree scorching, this prescribed fire was typical of those being implemented in ponderosa pine forests throughout the western U.S. However, we found that the extent and severity of riparian vegetation burned was substantially lower after prescribed fire compared to nearby wildfires. The early-season prescribed fire did not mimic the riparian or in-stream ecological effects observed following a nearby wildfire, even in catchments with burn extents similar to the prescribed fire. Little information exists on the effects of long-term fire exclusion from riparian forests, but a "prescribed fire regime" of repeatedly burning upland forests while excluding fire in adjacent riparian forests may eliminate an important natural disturbance from riparian and stream habitats.

Forest Ecology and Management↗
USGS2008

Analytical Results for Municipal Biosolids Samples from a Monitoring Program Near Deer Trail, Colorado (USA), 1999 through 2006

Since late 1993, Metro Wastewater Reclamation District of Denver (Metro District), a large wastewater treatment plant in Denver, Colorado, has applied Grade I, Class B biosolids to about 52,000 acres of non-irrigated farmland and rangeland near Deer Trail, Colorado. In cooperation with the Metro District in 1993, the U.S. Geological Survey (USGS) began monitoring ground water at part of this site (Yager and Arnold, 2003). In 1999, the USGS began a more comprehensive monitoring study of the entire site to address stakeholder concerns about the potential chemical effects of biosolids applications. This more comprehensive monitoring program has recently been extended through 2010. Monitoring components of the more comprehensive study include biosolids collected at the wastewater treatment plant, soil, crops, dust, alluvial and bedrock ground water, and stream bed sediment. Streams at the site are dry most of the year, so samples of stream bed sediment deposited after rain were used to indicate surface-water effects. This report will present only analytical results for the biosolids samples collected at the Metro District wastewater treatment plant in Denver and analyzed during 1999 through 2006. More information about the other monitoring components is presented elsewhere in the literature (e.g., Yager and others, 2004a, 2004b, 2004c, 2004d). Priority parameters for biosolids identified by the stakeholders and also regulated by Colorado when used as an agricultural soil amendment include the total concentrations of nine trace elements (arsenic, cadmium, copper, lead, mercury, molybdenum, nickel, selenium, and zinc), plutonium isotopes, and gross alpha and beta activity. Nitrogen and chromium also were priority parameters for ground water and sediment components. In general, the objective of each component of the study was to determine whether concentrations of priority parameters (1) were higher than regulatory limits, (2) were increasing with time, or (3) were significantly higher in biosolids-applied areas than in a similar farmed area where biosolids were not applied. Analytical results indicate that the elemental composition of the biosolids from the Denver plant was consistent during 1999-2006, and total concentrations of regulated trace elements were consistently lower than the regulatory limits. Plutonium isotopes were not detected in any of the biosolids samples for the entire sampling period. Analytical results for gross and were highly imprecise and erratic. As a result of the cancelation of regulation requiring their monitoring in biosolids, the determination of both was discontinued mid-study. Data from this study were used to compile an inorganic-chemical biosolids signature that can be contrasted with the geochemical signature for this site. The biosolids signature and an understanding of the geology and hydrology of the site can be used to separate biosolids effects from natural geochemical effects. Elements of particular interest for a biosolids signature include bismuth, copper, silver, mercury, and phosphorus.

Open-File Report↗
USGS1997

Holocene vegetation and historic grazing impacts at Capitol Reef National Park reconstructed using packrat middens

Mid- to late-Holocene vegetation change from a remote high-desert site was reconstructed using plant macrofossils and pollen from 9 packrat middens ranging from 0 to 5400 yr in age. Presettlement middens consistently contained abundant macrofossils of plant species palatable to large herbivores that are now absent or reduced, such as winterfat ( Ceratoides lanatd ) and ricegrass ( Stipa hymenoides ). Macrofossils and pollen of pinyon pine ( Pinus edulis ), sagebrush ( Artemisia spp.), and roundleaf buffaloberry ( Shepherdia rotundifolia ) were also recently reduced to their lowest levels for the 5400-yr record. Conversely, species typical of overgrazed range, such as snakeweed ( Gutierrezia sarothrae ), viscid rabbitbrush ( Chrysothamnus visidiflorus ), and Russian thistle ( Salsola sp.), were not recorded prior to the historic introduction of grazing animals. Pollen of Utah juniper ( Juniperus osteosperma ) also increased during the last 200 yr. These records demonstrate that the most severe vegetation changes of the last 5400 yr occurred during the past 200 yr. The nature and timing of these changes suggest that they were primarily caused by 19th-century open-land sheep and cattle ranching. The reduction of pinyon and sagebrush concurrent with other grazing impacts suggests that effects of cattle grazing at modern stocking levels may be a poor analog for the effects of intense sheep grazing during drought.

Great Basin Naturalist↗
USGS2022

Fishway Entrance Palisade

This technical report summarizes the work that was conducted by the University of Massachusetts Amherst and the United States Geological Survey (USGS), along with other project partners, on the Fishway Entrance Palisade (EP), a projected funded through the Department of Energy’s (DOE) funding opportunity titled ‘Innovative Solutions for Fish Passage at Hydropower Dams’ (DE‐FOA‐0001662). The period of performance ranged from September 1, 2018 through September 30, 2021. The EP is a novel fish passage engineering technology designed to provide more favorable entry conditions for fish and to reduce costs relative to conventional fishway auxiliary water systems (AWS). The EP project has four primary components. First, the Northeast United States Auxiliary Water Systems Database was created (Northeast Fishway Auxiliary Water Systems Database Section). The database, developed with material provided by the U.S. Fish and Wildlife Service, contains information on fishway type (e.g., lift, Denil, pool and weir) and Auxiliary Water System (AWS) details (e.g., water conveyance method, diffuser type) for 60 hydroelectric sites in the region. Findings indicate that nearly 4 out of every 10 fishway in the region is a fish lift and approximately 1 out of every 4 is a Denil ladder. The remainder are a mix of vertical slot fishways, pool and weirs, and Ice Harbor fishways. Furthermore, over half of all AWS systems use floor diffusers to discharge the auxiliary (or attraction) water into the entrance of a fishway, whereas only 14% use wall diffusers. Second, limited experiments on a conventional AWS with live, actively migrating fish were conducted at the USGS Easter Ecological Science Center (EESC) S.O. Conte Research Laboratory (Conventional Auxiliary Water System Experiments Section). This study determined how water velocity through a wall diffuser, without turning vanes or timber baffles to distribute the flow, affects the behavior and passage of adult American shad, a conservative surrogate species for migratory fish on the East Coast. Two gross diffuser velocity treatments were examined, 0.5 ft/s and 1.0 ft/s. These wall diffuser velocities represented current (0.5 ft/s) and past (1.0 ft/s) design criteria guidelines set forth by the USFWS North Atlantic-Appalachian Region (Rojas 2020; USFWS 2019). Six trials with a total of 151 American Shad were conducted in June of 2019 for the two treatments. No differences in American shad passage efficiency were discovered between the two treatments, while approximately 3 in every 4 attempts were successful at passing the diffuser. While these results may appear to indicate that the generally accepted gross wall diffuser velocity criteria for American shad of 0.5 ft/s could be safely increased to 1.0 ft/s, further analysis is warranted. Furthermore, it is unknown how other migratory and resident fish species that traverse these structures would be impacted by such a change. Studying the wall diffuser hydraulics led to an important AWS observation. Without turning vanes or timber baffles in this study, doubling the diffuser area was insufficient at producing the type of flow field change one may expect by halving the gross diffuser velocity. Instead, the flow fields throughout each treatments study area were similar, which led to similar results in shad performance. This not only highlights the importance of installing flow guidance devices like turning vanes, but also to the importance of properly maintaining them, which can be costly. Third, more expansive experiments on the novel EP were conducted in the spring of 2019 and 2021 (Fishway Entrance Palisade Experiments). The goal of this study was to determine how adult American shad responded to a variety of conditions at a full-scale EP. A total of six treatments were examined by changing the average auxiliary channel velocity between 1.0 and 5.0 ft/s in intervals of 1.0 ft/s and by inserting/removing an entrance gate at the opening of the fishway. Thirty trials with a total of 1,273 shad were conducted over the two years. In all treatments, at least ~7 out of every 10 fish successfully passed the EP diffuser and swam into the entrance channel within the 3.5-hour long trial, highlighting the general effectiveness of the novel AWS technology. In both study years, lower velocities through the EP diffuser led to increased shad performance, though performance peaked for the 2 ft/s velocity treatment. This treatment condition represents an approximate six-fold increase in gross diffuser velocity relative to conventional auxiliary water systems, which in turn presents opportunities for cost savings (e.g., reduction in diffuser size). Shad performance, in general, was worse in 2019 than in 2021, potentially due to the different run timing when our trials were conducted (2019 trials occurred near the end of the migration season, unlike in 2021). Treatments in 2019 had approximately a 20% reduction in entrance efficiency by the trial end, including a 16.7% drop for the 3 ft/s velocity treatment in 2019 relative to 2021 (the only carryover treatment between years). Lastly, adding an entrance gate caused a significant delay to entry. The time to 25% entry raised ~20 minutes from the near instantaneous 25% entry that was reported for the other treatments conducted in the same year (2021). Though by the end of the 3.5-hour trial, the overall entrance efficiency nearly matched those of the other 2021 treatments. The fourth and final component of the EP project was an economic analysis that focused on the cost of attraction and environmental flows (Modeling Power Generation Losses Due to Environmental and Fish Passage Attraction Flows at a Run-Of-River Hydroelectric Operation in the Northeast). The study assessed the economic impact of meeting environmental flow requirements at a representative hydroelectric facility and fish lift in the Northeast. An initial finding of the study was that there is a paucity of published data on the costs of meeting attraction and environmental flows. This is due, in part, to the proprietary nature of this data. To explore the costs associated with these flows, three types of environmental flows were assessed: upstream fishway attraction flows, downstream fishway attraction flows, and habitat maintenance minimum flows. A physics-based model was developed and calibrated with three years of hourly generation and flow data as inputs. Gage flow inputs were adjusted and used to calculate power generated. To address hydrologic variability, the model was executed to simulate 30 years of historical flows. Results indicate that both interannual and seasonal climatic factors impact the costs of meeting environmental flow requirements. Generation potential is most strongly curtailed during dry years in terms of maximizing the capacity factor (the percent of time a plant generates at capacity). Dry years, and especially dry summers, have the most significant costs associated with mitigation flows. Of the three types of flows, habitat flows are most costly in terms of power production, followed by upstream attraction flows. Downstream attraction flows are least costly. This finding is the likely result of differences in both flow rates and duration of the seasonal requirement for each flow. Overall, environmental flows represented a 2-12% loss in annual generation, but losses during a dry summer can reach over 20%.

Final Technical Report↗
USGS2021

Experimental tree mortality does not induce marsh transgression in a Chesapeake Bay low-lying coastal forest

Transgression into adjacent uplands is an important global response of coastal wetlands to accelerated rates of sea level rise. “Ghost forests” mark a signature characteristic of marsh transgression on the landscape, as changes in tidal inundation and salinity cause bordering upland tree mortality, increase light availability, and the emergence of tidal marsh species due to reduced competition. To investigate these mechanisms of the marsh migration process, we conducted a field experiment to simulate a natural disturbance event (e.g., storm-induced flooding) by inducing the death of established trees (coastal loblolly pine, Pinus taeda ) at the marsh-upland forest ecotone. After this simulated disturbance in 2014, we monitored changes in vegetation along an elevation gradient in control and treatment areas to determine if disturbance can lead to an ecosystem shift from forested upland to wetland vegetation. Light availability initially increased in the disturbed area, leading to an increase in biodiversity of vegetation with early successional grass and shrub species. However, over the course of this 5-year experiment, there was no increase in inundation in the disturbed areas relative to the control and pine trees recolonized becoming the dominant plant cover in the disturbed study areas. Thus, in the 5 years since the disturbance, there has been no overall shift in species composition toward more hydrophytic vegetation that would be indicative of marsh transgression with the removal of trees. These findings suggest that disturbance is necessary but not sufficient alone for transgression to occur. Unless hydrological characteristics suppress tree re-growth within a period of several years following disturbance, the regenerating trees will shade and outcompete any migrating wetland vegetation species. Our results suggest that complex interactions between disturbance, biotic resistance, and slope help determine the potential for marsh transgression.

Chesapeake Bay low-lying coastal forest↗
USGS2007

The Yellowstone hotspot, Greater Yellowstone ecosystem, and human geography

Active geologic processes associated with the Yellowstone hotspot are fundamental in shaping the landscapes of the greater Yellowstone ecosystem (GYE), a high volcanic plateau flanked by a crescent of still higher mountainous terrain. The processes associated with the Yellowstone hotspot are volcanism, faulting, and uplift and are observed in the geology at the surface. We attribute the driving forces responsible for the northeastward progression of these processes to a thermal plume rising through the Earth’s mantle into the base of the southwest-moving North American plate. This progression began 16 million years ago (Ma) near the Nevada-Oregon border and arrived at Yellowstone about 2 Ma. Before arrival of the hotspot, an older landscape existed, particularly mountains created during the Laramide orogeny about 70–50 Ma and volcanic terrain formed by Absaroka andesitic volcanism mostly between 50–45 Ma. These landscapes were more muted than the present, hotspot-modified landscape because the Laramide-age mountains had worn down and an erosion surface of low relief had developed on the Absaroka volcanic terrain. The Yellowstone Plateau was built by hotspot volcanism of rhyolitic lavas and caldera-forming rhyolite tuffs (ignimbrites). Streams eroding back into the edges of this plateau have created scenic waterfalls and canyons such as the Grand Canyon of the Yellowstone and Lewis Canyon. Rhyolite is poor in plant nutrients and forms sandy, well-drained soils that support the monotonous, fire-adapted lodgepole pine forests of the Yellowstone Plateau. Non-rhyolitic rocks surround this plateau and sustain more varied vegetation, including spruce, fir, and whitebark pine forests broken by grassy meadows. Heat from the hotspot rises upward and drives Yellowstone’s famed geysers, hot springs, and mudpots. These thermal waters are home to specialized, primitive ecosystems, rich in algae and bacteria. The rock alteration associated with hydrothermal systems creates the bright colors of Yellowstone’s Grand Canyon. Basin-and-range-style faulting has accompanied migration of the hotspot to Yellowstone and formed the linear mountains and valleys that occur north and south of the hotspot track, which is the present-day eastern Snake River Plain. High rates of basin-and-range faulting occurred adjacent to the migrating Yellowstone hotspot, creating distinctive landscapes within the GYE such as the Teton Range/Jackson Hole, with characteristic rugged, forested ranges and adjacent flat-floored grassy valleys. The difference in altitude between the mountains and valleys provides a topographic gradient in which vegetation maturation advances with altitude; animal-migration patterns also follow this trend. The valleys provide natural meadows, agricultural land, town sites, and corridors for roads. Uplift of the GYE by as much as 1 km (3,000 ft) during the last 5 million years has resulted in ongoing erosion of deep, steep-walled valleys. Many prominent ecological characteristics of Yellowstone derive from this hotspot-induced uplift, including the moderate- to high- altitude terrain and associated cool temperatures and deep snowfall. Modern and Pleistocene climate and associated vegetation patterns strongly relate to the topography created by the hotspot and its track along the eastern Snake River Plain. Winter air masses from the moist northern Pacific Ocean traverse the topographic low of the Snake River Plain to where orographic rise onto the Yellowstone Plateau and adjacent mountains produces deep snow. A winter precipitation shadow forms on the lee (eastern) sides of the GYE. During Pleistocene glacial times, this moisture conduit provided by the hotspot-track-produced ice-age glaciers that covered the core of the present GYE. These glaciers sculpted bedrock and produced glacial moraines that are both forested and unforested, sand and gravel of ice-marginal streams and outwash gravels that are commonly covered with sagebrush-grassland, and silty lake sediments that are commonly covered by lush grassland such as Hayden Valley. The effects of the Yellowstone hotspot also profoundly shaped the human history in the GYE. Uplift associated with the hotspot elevates the GYE to form the Continental Divide, and streams drain radially outward like spokes from a hub. Inhabitants of the GYE 12,000–10,000 years ago, as well as more recent inhabitants, followed the seasonal green-up of plants and migrating animals up into the mountain areas. During European immigration, people settled around Yellowstone in the lower parts of the drainages and established roads, irrigation systems, and cultural associations. The core Yellowstone highland is too harsh for agriculture and inhospitable to people in the winter. Beyond this core, urban and rural communities exist in valleys and are separated by upland areas. The partitioning inhibits any physical connection of communities, which in turn complicates pursuit of common interests across the whole GYE. Settlements thus geographically isolated evolved as diverse, independent communities

Idaho, Montana, Utah, Wyoming↗