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User's guide to SSARRMENU

The U.S. Geological Survey, in cooperation with Pierce County Department of Public Works, Washington, has developed an operational tool called the Puyallup Flood-Alert System to alert users of impending floods in the Puyallup River Basin. The system acquires and incorporates meteorological and hydrological data into the Streamflow Synthesis and Reservoir Regulation (SSARR) hydrologic flow-routing model to simulate floods in the Puyallup River Basin. SSARRMENU is the user-interactive graphical interface between the user, the input and output data, and the SSARR model. In a companion cooperative project with Pierce County, the SSARR model for the Puyallup River Basin was calibrated and validated. The calibrated model is accessed through SSARRMENU, which has been specifically programed for the Puyallup River and the needs of Pierce County. SSARRMENU automates the retrieval of data from ADAPS (Automated DAta Processing System, the U.S. Geological Survey?s real-time hydrologic database), formats the data for use with SSARR, initiates SSARR model runs, displays alerts for impending floods, and provides utilities to display the simulated and observed data. An on-screen map of the basin and a series of menu items provide the user wi

Open-File Report↗

Assessing spatial variability of nutrients, phytoplankton, and related water-quality constituents in the California Sacramento–San Joaquin Delta at the landscape scale—Comparison of four (2018, 2020, 2021, 2022) spring high-resolution mapping surveys

Executive Summary This report summarizes results from boat-based, high-resolution water-quality mapping surveys completed before, during, and after upgrades to the EchoWater Resource Recovery Facility (EchoWater Facility), the regional wastewater facility for the City of Sacramento and surrounding areas, near Elk Grove, California. Surveys were completed in the tidal aquatic environments of the Sacramento–San Joaquin Delta (Delta) in spring (May or June) 2018, 2020, 2021, and 2022. In each survey, a suite of in situ sensors were used to continuously (one measurement per second) measure water-quality conditions, nutrients, phytoplankton abundance, and species composition. In addition to in situ data collection, discrete water samples were collected about every 2 miles while underway for determination of phosphate, ammonium, and nitrate concentration. The boat stopped at about 30 locations to collect discrete samples for a suite of additional analytes, including phytoplankton enumeration. The four surveys represent snapshots in time across different phases of the EchoWater Facility Biological Nutrient Reduction (BNR) upgrade. The May 2018 survey represents conditions before the upgrade. The second survey (June 2020) represents conditions after implementation of the Nitrifying Sidestream Treatment. The third survey (May 2021) was completed immediately after the completion of the BNR upgrade and represents a transitional period, and the final survey (May 2022) represents post-upgrade conditions. Relevant hydrologic and climatic context such as water-year type, X 2 position (the distance from the Golden Gate Bridge to the point upstream where bottom salinity is 2 parts per thousand; Jassby and others, 1995), water export to import ratio, and management actions like the Delta Cross Channel gate operations are presented for each survey so they may be considered in comparisons among surveys. Differences in water-quality parameters, like turbidity, temperature, salinity, pH, and dissolved oxygen (DO) improve understanding of nutrient cycling and phytoplankton dynamics. Because the Delta is a complex system, we divided the study area into hydrologic zones to better examine general trends and obtain a broadscale view of differences among the 4 study years. Results are presented for each survey and parameter using box plots to compare the different hydrologic zones. We also present each parameter using contour maps by survey to display gradients across the system. The most evident change to water quality in the Delta across surveys is related to the EchoWater Facility BNR upgrade, which included nitrification and denitrification processes. Through this upgrade, effluent ammonium (NH 4 + ) concentrations were reduced by more than 95 percent (from about 2,000 micromolars [μM] to below the reporting limit of 35 μM), and nitrate (NO 3 − ) concentrations increased from near zero to about 500 μM; therefore, the concentration of dissolved inorganic nitrogen (DIN; the sum of NH 4 + and NO 3 − ) in the effluent was reduced by about 75 percent between May 2018 and May 2022. The BNR upgrade resulted in a reduction in NH 4 + concentrations in aquatic habitats immediately below the facility, designated as the “north Delta tidal transition zone” (Bergamaschi and others, 2024), from about 30 μM pre-upgrade to near zero during the 2022 spring survey, whereas effluent NO 3 − increased from median concentrations of about 7 μM to about 15 μM. Because of the reduced effluent nitrogen loads and variability in Sacramento River nitrogen loads from upstream sources, DIN concentrations in the north Delta tidal transition zone decreased from a median of 53.3 μM in 2018 to 35.3 μM in 2020, 20.7 μM in 2021, and 11.3 μM in 2022 during the spring surveys. The changes in DIN concentration and form observed in the north Delta tidal transition zone after the EchoWater Facility upgrade extended downstream but were rapidly altered by hydrologic mixing, biogeochemical processes, and other nutrient source inputs. Most of the Delta indicated near-zero concentrations of NH 4 + 1 year after the completion of the EchoWater Facility upgrades represented by the 2022 survey. Exceptions to this finding were observed in the San Joaquin River near Stockton and in Suisun Bay, indicating there are NH 4 + inputs to these locations from other sources (for example, Stockton Regional Wastewater Control Facility and Central Contra Costs Sanitary District wastewater treatment plants or agricultural and urban runoff). Although there was an increase in NO 3 − concentrations in the north Delta tidal transition zone after the upgrade, increases in NO 3 − in other zones were not apparent, presumably because nitrification of effluent derived ammonium was no longer a source of NO 3 − . Concentrations of DIN in many Delta zones were lower in 2022 compared to 2018 and 2020, with concentrations near or below what is considered potentially nitrogen limiting conditions for phytoplankton growth in the North Delta tidal transition zone and the Cache Slough complex channel system. Unrelated to the EchoWater Facility upgrade, NO 3 − and therefore DIN concentrations increased in the San Joaquin River near Stockton and in adjacent water bodies by survey date (likely associated with increasing drought conditions). The Mokelumne River had low DIN concentrations, except in 2018 when the Delta Cross Channel was open, which allowed nutrient-rich Sacramento River water to flow into this section of the river. Data from these surveys also support the hypothesis that nutrient drawdown during phytoplankton blooms may create localized nitrogen limiting conditions. The BNR upgrade resulted in lower effluent phosphate (PO 4 3− ) concentrations, which lowered PO 4 3− concentrations in some zones of the Delta during the four spring surveys; however, PO 4 3− concentrations throughout the Delta remained above 0.3 μM, indicating that primary productivity was not limited by phosphorous availability. DIN and PO 4 3− decreased after the upgrade in many areas of the Delta, and the DIN to dissolved inorganic phosphorus (DIN:DIP) ratio remained similar to pre-upgrade conditions and was often below the Redfield Ratio of 16, indicating nitrogen is more likely to limit phytoplankton growth than phosphorous. Inputs of dissolved organic carbon (DOC) from the EchoWater Facility are a minor source of this constituent to the Delta, so the upgrade had little to no effect on DOC concentrations across the Delta. Because phytoplankton abundance and species composition in the Delta are shaped by multiple factors other than nutrients (for example, light availability, temperature, salinity, and predation), it is important to consider these factors (as well as long-term monitoring) in addition to the EchoWater Facility upgrade. Although phytoplankton populations were low across much of the Delta during the spring surveys, several localized phytoplankton blooms (defined here as greater than 15 micrograms per liter [μg/L] of chlorophyll) provide insight into conditions that may favor the growth of beneficial and harmful species.

Callifornia↗

How hydrologic connectivity regulates water quality in river corridors

Downstream flow in rivers is repeatedly delayed by hydrologic exchange with off‐channel storage zones where biogeochemical processing occurs. We present a dimensionless metric that quantifies river connectivity as the balance between downstream flow and the exchange of water with the bed, banks, and floodplains. The degree of connectivity directly influences downstream water quality — too little connectivity limits the amount of river water exchanged and leads to biogeochemically inactive water storage, while too much connectivity limits the contact time with sediments for reactions to proceed. Using a metric of reaction significance based on river connectivity, we provide evidence that intermediate levels of connectivity, rather than the highest or lowest levels, are the most efficient in removing nitrogen from Northeastern United States’ rivers. Intermediate connectivity balances the frequency, residence time, and contact volume with reactive sediments, which can maximize the reactive processing of dissolved contaminants and the protection of downstream water quality. Our simulations suggest denitrification dominantly occurs in riverbed hyporheic zones of streams and small rivers, whereas vertical turbulent mixing in contact with sediments dominates in mid‐size to large rivers. The metrics of connectivity and reaction significance presented here can facilitate scientifically based prioritizations of river management strategies to protect the values and functions of river corridors.

Journal of the American Water Resources Associatio↗

USGS science in Menlo Park -- a science strategy for the U.S. Geological Survey Menlo Park Science Center, 2005-2015

In the spring of 2004, the U.S. Geological Survey (USGS) Menlo Park Center Council commissioned an interdisciplinary working group to develop a forward-looking science strategy for the USGS Menlo Park Science Center in California (hereafter also referred to as "the Center"). The Center has been the flagship research center for the USGS in the western United States for more than 50 years, and the Council recognizes that science priorities must be the primary consideration guiding critical decisions made about the future evolution of the Center. In developing this strategy, the working group consulted widely within the USGS and with external clients and collaborators, so that most stakeholders had an opportunity to influence the science goals and operational objectives. The Science Goals are to: Natural Hazards: Conduct natural-hazard research and assessments critical to effective mitigation planning, short-term forecasting, and event response. Ecosystem Change: Develop a predictive understanding of ecosystem change that advances ecosystem restoration and adaptive management. Natural Resources: Advance the understanding of natural resources in a geologic, hydrologic, economic, environmental, and global context. Modeling Earth System Processes: Increase and improve capabilities for quantitative simulation, prediction, and assessment of Earth system processes. The strategy presents seven key Operational Objectives with specific actions to achieve the scientific goals. These Operational Objectives are to: Provide a hub for technology, laboratories, and library services to support science in the Western Region. Increase advanced computing capabilities and promote sharing of these resources. Enhance the intellectual diversity, vibrancy, and capacity of the work force through improved recruitment and retention. Strengthen client and collaborative relationships in the community at an institutional level. Expand monitoring capability by increasing density, sensitivity, and efficiency and reducing costs of instruments and networks. Encourage a breadth of scientific capabilities in Menlo Park to foster interdisciplinary science. Communicate USGS science to a diverse audience.

Circular↗

Preliminary assessment of channel stability and bed-material transport in the Coquille River basin, southwestern Oregon

This report summarizes a preliminary study of bed-material transport, vertical and lateral channel changes, and existing datasets for the Coquille River basin, which encompasses 2,745 km 2 (square kilometers) of the southwestern Oregon coast. This study, conducted to inform permitting decisions regarding instream gravel mining, revealed that: The 115.4-km-long study area on the South Fork and mainstem Coquille River can be divided into four reaches on the basis of topography and hydrology. In the fluvial (nontidal, or dominated by riverine processes) reaches on the South Fork Coquille River, the channel consists of bedrock and alluvium in the Powers Reach and mostly alluvium in the Broadbent Reach. In both fluvial reaches, the channel alternates between confined and unconfined segments and contains gravel bars. In the tidally affected Myrtle Point and Bandon Reaches, the channel consists of alluvial deposits and contains sparse gravel and sand bars as well as expansive mud flats and tidal marshes near the Coquille River mouth. The 15.4- and 14.6-km-long study areas on the Middle and North Forks of the Coquille River, respectively, were treated as distinct reaches. The channel beds consist of mixed bedrock and alluvium in the Bridge Reach on the Middle Fork Coquille River and alluvium in the Gravelford Reach on the North Fork Coquille River. Both of these reaches contain fewer bars than the Powers and Broadbent Reaches on the South Fork Coquille River and are predominately fluvial. Channel condition, bed-material transport, and the distribution and area of bars have likely been influenced by logging and splash damming, dredging and wood removal for navigation, historical and ongoing instream gravel mining, gold mining, fires, and mass movements. These anthropogenic and natural disturbances likely have varying effects on channel condition and sediment flux throughout the study area and over time. Available data include at least eight sets of aerial and orthophotographs that were taken of the study area from 1939 to 2011 that are available for assessing long-term changes in channel condition, bar area, and vegetation establishment patterns. Additionally, a high-resolution Light Detection And Ranging (LiDAR) survey conducted in 2008 for nearly the entire study area would be useful in future quantitative analyses of channel morphology and bed-material transport. Previous studies found (1) substantial bank erosion in the Broadbent Reach, resulting in banks with near vertical profiles and heights exceeding 7.6 m, (2) erosion of over 40,000 square meters of riparian land from 1939 to 1992, (3) incision along the South Fork Coquille River, and (4) potential for lateral channel migration at several locations along the mainstem and South Fork Coquille River. A review of deposited and mined bed-material estimates derived largely from repeat surveys at instream mining sites on the South Fork Coquille River indicates that bed material transported by the river tends to rebuild mined bar surfaces in most years. Reported annual deposition volumes for 1996–2009 indicate average transport of over 34,700 cubic meters per year (m 3 /yr) of bed material into the South Fork Coquille River study area. The spatial variation in the number and area of gravel bars is controlled by factors such as valley confinement, channel slope, basin geology, and tidal extent. The Powers and Broadbent Reaches of the South Fork Coquille River have the greatest abundance of gravel bars, likely owing to a substantial area of the South Fork Coquille River basin draining the gravel-producing Klamath Mountains geologic province. From 1939 to 2009, the fluvial reaches all had a net loss in bar area, ranging from 24 percent in the Powers Reach to 56 percent in the Bridge Reach. In the Powers and Broadbent Reaches, the declines in active bar area were associated primarily with vegetation establishment on bar surfaces and lateral bar erosion. The reductions in active bar area were attributed to vegetation establishment in the Bridge and Gravelford Reaches as well as some lateral bar erosion in the Bridge Reach. In contrast, the tidal Myrtle Point and Bandon Reaches had a net increase in bar area (28 and 29 percent, respectively) from 1939 to 2009. In the Myrtle Point Reach, these increases in bar area were primarily attributed to lateral channel migration that led to the deposition of bed material at newly formed bars. In the Bandon Reach, bar area increased primarily in the lower 5.4 km of the reach owing possibly to factors such as tide differences between the photographs and sediment deposition. Analyses of multiple channel cross sections along the South Fork Coquille River as well as historical stage-discharge data collected by the U.S. Geological Survey (USGS) at Powers, Oregon, indicate that the bed of the South Fork Coquille River has locally lowered, as much as 1.9 m from 1994 to 2008 for one site in the Broadbent Reach. Stage-discharge data indicate persistent incision at the Powers site since 1939 (with a net incision of about 0.3 m) that has been interrupted by episodic aggradation apparently corresponding with large floods. For the Bridge and Gravelford Reaches on the Middle and North Forks of the Coquille River, channel cross sections indicate a mix of aggradation and incision as well as bank erosion and deposition from 1992 to 2010 and 2000 to 2009, respectively. Cross sections in the tidal reaches indicate local incision of 0.4 m in at one site in the Myrtle Point Reach from 2004 to 2008 and 0.5 m at one site in in the Bandon Reach from 2000 to 2010. On the South Fork Coquille River, the median diameter of surface particles varied from 78.0 mm (millimeters) at China Flat Bar slightly upstream of the study area to 48.8 mm at Seals Bar in the Broadbent Reach. The armoring ratio (or ratio of the median grain sizes of the surface and subsurface layers) for Seals Bar was 3.5, indicating that the river’s transport capacity likely exceeds sediment supply at this site. Most fluvial reaches in the Coquille River study area are likely supply-limited, meaning that the river’s transport capacity exceeds the supply of bed-material, as indicated by the intermittent bedrock outcrops in the Powers and Bridge Reaches and the paucity of bars in the Bridge and Gravelford Reaches. The Broadbent Reach of the South Fork Coquille River may be presently and probably was historically transport-limited, meaning that bed-material transport is primarily a function of local transport capacity. However, the locally coarse bed texture, high armoring ratio measured at Seals Bar, and recent channel incision indicate that sediment supply has likely diminished relative to transport capacity in recent decades. Because of exceedingly low gradients, the tidal Myrtle Point and Bandon Reaches are transport limited. Bed material in these reaches is primarily sand and finer grain-size material, much of which is probably transported as suspended load from upstream reaches. The tidal reaches will be most susceptible to watershed conditions affecting the supply and transport of fine sediment. Compared to the nearby Chetco and Rogue Rivers and Hunter Creek on the southwestern Oregon coast, the Coquille River likely has lower overall transport of gravel bed material. While the conclusion of lower bed-material transport in the Coquille River is tentative in the absence of actual transport measurements or transport capacity calculations, empirical evidence including the much lower area and frequency of bars for most of the Coquille River study area and the head of tide reaching to RKM (river kilometer) 63.2 on the South Fork Coquille River supports this conclusion. More detailed investigations of bed-material transport rates and channel morphology would support assessments of lateral and vertical channel condition and longitudinal trends in bed material. Such assessments would be most practical for the Powers and Broadbent Reaches and relevant to several ongoing management and ecological issues pertaining to sand and gravel transport. The tidal Bandon and Myrtle Point Reaches may also be logical subjects for in-depth analyses of fine sediment deposition and transport (and associated channel and riparian conditions and processes) rather than coarse bed material.

Oregon↗

Geologic appraisal of Paradox basin salt deposits for water emplacement

Thick salt deposits of Middle Pennsylvanian age are present in an area of 12,000 square miles in the Paradox basin of southeast Utah and southwest Colorado. The deposits are in the Paradox Member of the Hermosa Formation. The greatest thickness of this evaporite sequence is in a troughlike depression adjacent to the Uncompahgre uplift on the northeast side of the basin. The salt deposits consist of a cyclical sequence of thick halite units separated by thin units of black shale, dolomite, and anhydrite. Many halite units are several hundred feet thick and locally contain economically valuable potash deposits. Over much of the Paradox basin the salt deposits occur at depths of more than 5,000 feet. Only in a series of salt anticlines located along the northeastern side of the basin do the salt deposits rise to relatively shallow depths. The salt anticlines can be divided geographically and structurally into five major systems. Each system consists of a long undulating welt of thickened salt over which younger rocks are arched in anticlinal form. Locally there are areas along the axes of the anticlines where the Paradox Member was never covered by younger sediments. This allowed large-scale migration of Paradox strata toward and up through these holes in the sediment cover forming diapiric anticlines. The central or salt-bearing cores of the anticlines range in thickness from about 2,500 to 14,000 feet. Structure in the central core of the salt anticlines is the result of both regional-compression and flowage of the Paradox Member into the anticlines from adjacent synclines. Structure in the central cores of the salt anticlines ranges from relatively undeformed beds to complexly folded and faulted masses, in which stratigraphic continuity is undemonstrable. The presence of thick cap rock .over many of the salt anticlines is evidence of removal of large volumes of halite by groundwater. Available geologic and hydrologic information suggests that this is a relatively slow process and that any waste-storage or disposal sites in these structures should remain dry for hundreds of thousands of years. Trace to commercial quantities of oil and gas are found in all of the black shale-dolomite-anhydrite interbeds of the Paradox Member. These hydrocarbons constitute a definite hazard in the construction and operation of underground waste-storage or disposal facilities. However, many individual halite beds are of. sufficient thickness that a protective seal of halite can be left between the openings and the gassy beds. A total of 12 different localities were considered to be potential waste-storage or disposal sites in the Paradox basin. Two Sharer dome and Salt Valley anticline, were considered to have the most favorable characteristics.

Utah↗

Ground-water applications of remote sensing

Remote sensing can be used as a tool to inventory springs and seeps and to interpret lithology, structure, and ground-water occurrence and quality. Thermograms are the best images for inventory of seeps and springs. The steps in aquifer mapping are image analysis and interpretation and ground-water interpretation. A ground-water interpretation is derived from a conceptual geologic model by inferring aquifer characteristics and water salinity. The image selection process is very important for obtaining maximum geologic and hydrologic information from remotely sensed data. Remote sensing can contribute an image base map or geologic and hydrologic parameters, derived from the image, to the multiple data sets in a hydrologic information system. Various merging and integration techniques may then be used to obtain information from these data sets.

Open-File Report↗

Hydrochemical facies and ground-water flow patterns in northern part of Atlantic Coastal Plain

The part of the Atlantic Coastal Plain that extends from New Jersey through Virginia was selected as a suitable field model in which to study the relationships between geology, hydrology, and chemical character of ground water. The ground-water flow pattern is the principal hydrologic control on the chemical character of the water. Within the Coastal Plain sediments, the proportions of clay, glauconitic sand, and calcareous material are the principal lithologic controls over the chemistry of the water. A subsurface body of salt water extends from southern New Jersey through southern Virginia and occupies the deposits deeper than about 500 feet below land surface in the eastern part of the Coastal Plain. The position of its top is determined by the relative head, which in turn is influenced by topography, drainage density, and the thickness and permeability of the Coastal Plain sediments. Hydrochemical facies is a term used in this paper to denote the diagnostic chemical aspect of ground-water solutions occurring in hydrologic systems. The facies reflect the response of chemical processes operating within the lithologic framework and also the pattern of flow of the water. The distribution of these facies is shown in trilinear diagrams and isometric fence diagrams and on maps showing isopleths of chemical constituents within certain formations. The occurrence of the various facies within one formation or within a group of formations of uniform mineralogy indicates that the ground-water flow through the aquifer system modifies the distribution of the facies. Flow patterns of fresh ground water shown on maps and in cross sections have been deduced from available water-level data. These patterns are controlled by the distribution of the higher landmasses and by the depth to either bedrock or to the salt-water interface. The mapping of hydrochemical facies shows that at shallow depths within the Coastal Plain (less than about 200 ft) the calcium-magnesium cation facies generally predominates. The bicarbonate anion facies occurs within more of the shallow Coastal Plain sediments than does the sulfate or the chloride facies. In deeper formations, the sodium chloride character predominates. The lower dissolved-solids content of the ground water in New Jersey indicates less upward vertical leakage than in Maryland and Virginia, where the shallow formations contain solutions of higher concentration.

Delaware, Maryland, New Jersey, Pennsylvania, Virg↗

Comparison of storm runoff models for a small watershed in an urban metropolitan area, Albuquerque, New Mexico

In order to comply with a current U.S. Environmental Protection Agency watershed-based National Pollutant Discharge Elimination System permit, the City of Albuquerque required a better understanding of the rainfall-runoff processes in its small urban watersheds. That requirement prompted the initiation of the assessment of three existing watershed models that were developed to simulate those processes. Three existing rainfall-runoff modeling software packages—Hydrologic Engineering Center Hydrologic Modeling System (HEC-HMS) (using two sets of methods), Program for Predicting Polluting Particle Passage Through Pits, Puddles, and Ponds (P8), and Arid-Lands Hydrologic Model (AHYMO)—were compared to determine which provided the best balance of accuracy and usability for simulating storm runoff in small watersheds in the urbanized area of Albuquerque, New Mexico. Additionally, results of this study could help inform model users who have interest in simulating storm runoff in similar urban areas throughout the United States. Each model was used to simulate storm runoff in the Hahn Arroyo watershed, an urbanized watershed with concrete-lined arroyo channels in the northeastern quadrant of Albuquerque that exhibits flashy, monsoonal-driven storm runoff. Model results were compared to observed discharge data, according to literature-recommended performance measures and performance evaluation criteria. The HEC-HMS model using the Soil Conservation Service (SCS) curve number (CN) and SCS unit hydrograph methods ranked the highest when averaging the individual performance measures (Nash-Sutcliffe Efficiency, percent bias, and coefficient of determination) rankings together across the hourly calibration and validation periods, followed by P8, which was tied with the HEC-HMS initial and constant approach. For daily rankings using the same rank-averaging approach, the HEC-HMS CN-based model and P8 were tied for the highest ranking, followed by the HEC-HMS initial and constant approach. Alternatively, rating performance using validation period results as an indication of the expected confidence in forecasted results for future conditions, the P8 model performed best for both hourly and daily time-steps, followed by the HEC-HMS CN-based model and the HEC-HMS initial and constant-based model. However, based on the literature performance evaluation criteria, the HEC-HMS and P8 models overall had marginally satisfactory performance only for operation at the daily time-step. Direct comparison of the HEC-HMS and P8 models to the AHYMO is difficult, given the different performance assessment criteria used to assess these models separately in this study, as recommended by the literature. The AHYMO results generally lacked precision, given the wide range in the performance assessment values across events in percent error in peak discharge, difference in timing of peak discharge, percent error in total runoff volume, and difference in duration of event relative to observed data. For some events, however, the AHYMO results were fairly accurate, and AHYMO was likely a good predictor of the timing of storm runoff and the shape of the hydrograph. This study did not assess the results for all potential applications of the models in the Albuquerque urbanized area. Further study may be required to assess the model performance capabilities in other modeling applications.

New Mexico↗

Small reservoir distribution, rate of construction, and uses in the upper and middle Chattahoochee basins of the Georgia Piedmont, USA, 1950-2010

Construction of small reservoirs affects ecosystem processes in numerous ways including fragmenting stream habitat, altering hydrology, and modifying water chemistry. While the upper and middle Chattahoochee River basins within the Southeastern United States Piedmont contain few natural lakes, they have a high density of small reservoirs (more than 7500 small reservoirs in the nearly 12,000 km2 basin). Policymakers and water managers in the region have little information about small reservoir distribution, uses, or the cumulative inundation of land cover caused by small reservoir construction. Examination of aerial photography reveals the spatiotemporal patterns and extent of small reservoir construction from 1950 to 2010. Over that 60 year timeframe, the area inundated by water increased nearly six fold (from 19 reservoirs covering 0.16% of the study area in 1950 to 329 reservoirs covering 0.95% of the study area in 2010). While agricultural practices were associated with reservoir creation from 1950 to 1970, the highest rates of reservoir construction occurred during subsequent suburban development between 1980 and 1990. Land cover adjacent to individual reservoirs transitioned over time through agricultural abandonment, land reforestation, and conversion to development during suburban expansion. The prolific rate of ongoing small reservoir creation, particularly in newly urbanizing regions and developing counties, necessitates additional attention from watershed managers and continued scientific research into cumulative environmental impacts at the watershed scale.

Georgia↗

Final report: Initial ecosystem response of salt marshes to ditch plugging and pool creation: Experiments at Rachel Carson National Wildlife Refuge (Maine)

This study evaluates the response of three salt marshes, associated with the Rachel Carson National Wildlife Refuge (Maine), to the practice of ditch plugging. Drainage ditches, originally dug to drain the marsh for mosquito control or to facilitate salt hay farming, are plugged with marsh peat in an effort to impound water upstream of the plug, raise water table levels in the marsh, and increase surface water habitat. At two study sites, Moody Marsh and Granite Point Road Marsh, ditch plugs were installed in spring 2000. Monitoring of hydrology, vegetation, nekton and bird utilization, and marsh development processes was conducted in 1999, before ditch plugging, and then in 2000 and 2001 (all parameters except nekton), after ditch plugging. Each study site had a control marsh that was monitored simultaneously with the plugged marsh, and thus, we employed a BACI study design (before, after, control, impact). A third site, Marshall Point Road Marsh, was plugged in 1998. Monitoring of the plugged and control sites was conducted in 1999 and 2000, with limited monitoring in 2001, thus there was no ?before? plug monitoring. With ditch plugging, water table levels increased toward the marsh surface and the areal extent of standing water increased. Responding to a wetter substrate, a vegetation change from high marsh species (e.g., Spartina patens) to those more tolerant of flooded conditions (e.g., Spartina alterniflora) was noted at two of the three ditch plugged sites. Initial response of the nekton community (fishes and decapod crustaceans) was evaluated by monitoring utilization of salt marsh pools using a 1m2 enclosure trap. In general, nekton species richness, density, and community structure remained unchanged following ditch plugging at the Moody and Granite Point sites. At Marshall Point, species richness and density (number of individuals per m2) were significantly greater in the experimental plugged marsh than the control marsh (<2% of the control marsh was open water habitat vs. 11% of the plugged marsh). The response of birds, categorized as waterfowl & waterbirds, shorebirds & wading birds, gulls & terns, and miscellaneous (raptors, passerines, other), was variable. Following ditch plugging, bird species richness increased at the Granite Point site (1999 pre-plug = 15.4, 2000 post-plug = 26.2, 2001 post-plug = 38.7). Because of a low sample size at Moody Marsh, reliable statements on species richness cannot be made. Density of birds (no. of birds per ha) remained unchanged with ditch plugging at Granite Point Marsh, although there was a strong, but not statistically significant, trend toward increased density. This study only reports on initial responses of marsh functions to ditch plugging. Monitoring should continue at these sites, and perhaps at additional sites, for the next decade or so. A monitoring plan is recommended. Long-term monitoring will include evaluation of salt marsh development processes using SET (surface elevation table) methodology. There is concern, although not confirmed, that as ditch-plugged marshes become wetter and marsh grass production declines their ability to keep pace with sea level rise could be jeopardized. It is suggested that ditch plugging should be considered an experimental marsh management technique. Additional monitoring on the physical and habitat responses of ditch-plugged marshes is required, along with assessments of other techniques aimed at restoring open water habitat to the marsh surface.

Book↗

Decadal changes in phenology of peak abundance patterns of woodland pond salamanders in northern Wisconsin

Woodland ponds are important landscape features that help sustain populations of amphibians that require this aquatic habitat for successful reproduction. Species abundance patterns often reflect site-specific differences in hydrology, physical characteristics, and surrounding vegetation. Large-scale processes such as changing land cover and environmental conditions are other potential drivers influencing amphibian populations in the Upper Midwest, but little information exists on the combined effects of these factors. We used Blue-spotted (Ambystoma laterale Hallowell) and Spotted Salamander (A. maculatum Shaw) monitoring data collected at the same woodland ponds thirteen years apart to determine if changing environmental conditions and vegetation cover in surrounding landscapes influenced salamander movement phenology and abundance. Four woodland ponds in northern Wisconsin were sampled for salamanders in April 1992-1994 and 2005-2007. While Blue-spotted Salamanders were more abundant than Spotted Salamanders in all ponds, there was no change in the numbers of either species over the years. However, peak numbers of Blue-spotted Salamanders occurred 11.7 days earlier (range: 9-14 days) in the 2000s compared to the 1990s; Spotted Salamanders occurred 9.5 days earlier (range: 3 - 13 days). Air and water temperatures (April 13- 24) increased, on average, 4.8°C and 3.7°C, respectively, between the decades regardless of pond. There were no discernible changes in canopy openness in surrounding forests between decades that would have warmed the water sooner (i.e., more light penetration). Our finding that salamander breeding phenology can vary by roughly 10 days in Wisconsin contributes to growing evidence that amphibian populations have responded to changing climate conditions by shifting life-cycle events. Managers can use this information to adjust monitoring programs and forest management activities in the surrounding landscape to avoid vulnerable amphibian movement periods. Considering direct and indirect stressors such as changing habitat and environmental conditions simultaneously to better understand trends in space and time can help improve monitoring programs for this taxa, which is at major risk of continued declines.

Wisconsin↗

Hydrologic and environmental thresholds in stream fish assemblage structure across flow regimes

The characteristic pattern of variation in flow magnitude, frequency, duration, timing, and rate of change defines the flow regime of rivers and streams and is a key driver of ecosystem processes in fluvial ecosystems. Understanding how freshwater biotic assemblages change across gradients of hydrology and anthropogenic-source disturbance in different streamflow regimes is crucial to managing for sustainable environmental flows and watershed conservation. We compiled long-term (1916–2016) occurrence records for fishes collected in the Ouachita-Ozark Interior Highlands and West Gulf Coastal Plain streams, together with hydrologic metrics calculated from daily streamflow data measured at USGS stream gauging stations (n = 111), to examine important drivers and thresholds for fish assemblage turnover in groundwater (GW), runoff (RO), and intermittent (INT) flow regimes. We also examined the importance of spatial gradients (latitude, longitude, elevation, drainage area) and anthropogenic-source stressors (Hydrologic Disturbance Index; HDI) for fish assemblage turnover using a gradient forest modeling approach. Watershed fragmentation was of high importance for fish assemblage turnover in RO and INT streams, while changes in dam storage were more important for fishes in GW streams. Hydrologic metrics describing seasonal and stochastic properties of daily streamflow (Mag6) were most important for fish assemblage turnover in INT streams. Timing of high flow events had significantly higher importance compared to flow magnitude, duration, and frequency metrics, especially for fish assemblages in GW and INT streams. The frequency and timing of low flow events had high importance for fish assemblage turnover across all stream flow classes, while the magnitude of low flows and the magnitude and rate of change of average flows was most important for INT stream fish assemblages. In addition to benefiting multi-species conservation and management actions through identification of local and regional flow-ecology relationships generalized across different flow regimes, the results of this study provide a better understanding of complex nonlinear threshold effects, which is critical to anticipating changes in aquatic ecosystems and communities.

Arkansas, Missouri, Oklahoma↗

Inverse modeling of BTEX dissolution and biodegradation at the Bemidji, MN crude-oil spill site

The U.S. Geological Survey (USGS) solute transport and biodegradation code BIOMOC was used in conjunction with the USGS universal inverse modeling code UCODE to quantify field-scale hydrocarbon dissolution and biodegradation at the USGS Toxic Substances Hydrology Program crude-oil spill research site located near Bemidji, MN. This inverse modeling effort used the extensive historical data compiled at the Bemidji site from 1986 to 1997 and incorporated a multicomponent transport and biodegradation model. Inverse modeling was successful when coupled transport and degradation processes were incorporated into the model and a single dissolution rate coefficient was used for all BTEX components. Assuming a stationary oil body, we simulated benzene, toluene, ethylbenzene, m , p -xylene, and o -xylene (BTEX) concentrations in the oil and ground water, respectively, as well as dissolved oxygen. Dissolution from the oil phase and aerobic and anaerobic degradation processes were represented. The parameters estimated were the recharge rate, hydraulic conductivity, dissolution rate coefficient, individual first-order BTEX anaerobic degradation rates, and transverse dispersivity. Results were similar for simulations obtained using several alternative conceptual models of the hydrologic system and biodegradation processes. The dissolved BTEX concentration data were not sufficient to discriminate between these conceptual models. The calibrated simulations reproduced the general large-scale evolution of the plume, but did not reproduce the observed small-scale spatial and temporal variability in concentrations. The estimated anaerobic biodegradation rates for toluene and o -xylene were greater than the dissolution rate coefficient. However, the estimated anaerobic biodegradation rates for benzene, ethylbenzene, and m , p -xylene were less than the dissolution rate coefficient. The calibrated model was used to determine the BTEX mass balance in the oil body and groundwater plume. Dissolution from the oil body was greatest for compounds with large effective solubilities (benzene) and with large degradation rates (toluene and o -xylene). Anaerobic degradation removed 77% of the BTEX that dissolved into the water phase and aerobic degradation removed 17%. Although goodness-of-fit measures for the alternative conceptual models were not significantly different, predictions made with the models were quite variable.

Minnesota↗

Chemical loading into surface water along a hydrological, biogeochemical, and land use gradient: A holistic watershed approach

Identifying the sources and impacts of organic and inorganic contaminants at the watershed scale is a complex challenge because of the multitude of processes occurring in time and space. Investigation of geochemical transformations requires a systematic evaluation of hydrologic, landscape, and anthropogenic factors. The 1160 km 2 Boulder Creek Watershed in the Colorado Front Range encompasses a gradient of geology, ecotypes, climate, and urbanization. Streamflow originates primarily as snowmelt and shows substantial annual variation. Water samples were collected along a 70-km transect during spring-runoff and base-flow conditions, and analyzed for major elements, trace elements, bulk organics, organic wastewater contaminants (OWCs), and pesticides. Major-element and trace-element concentrations were low in the headwaters, increased through the urban corridor, and had a step increase downstream from the first major wastewater treatment plant (WWTP). Boron, gadolinium, and lithium were useful inorganic tracers of anthropogenic inputs. Effluent from the WWTP accounted for as much as 75% of the flow in Boulder Creek and was the largest chemical input. Under both hydrological conditions, OWCs and pesticides were detected in Boulder Creek downstream from the WWTP outfall as well as in the headwater region, and loads of anthropogenic-derived contaminants increased as basin population density increased. This report documents a suite of potential endocrine-disrupting chemicals in a reach of stream with native fish populations showing indication of endocrine disruption.

Environmental Science & Technology↗

Hydrochemical processes during snowmelt in a subalpine watershed, Colorado, USA

Snowmelt is the primary hydrologic event in the studied subalpine watershed, generating streamflow for 3 months from a 1-month snowmelt period which commenced in mid-April 1992 and mid-May 1993. The melting rate of the snowpack varied diurnally and was asymmetrical, increasing rapidly to a maximum at the onset of daily melt followed by an attenuated decrease. Streamflow varied diurnally, displaying a similar pattern to that of snowmelt, but variations were much less marked. Groundwater levels also varied diurnally, but were more attenuated than that of streamflow, and the time of daily maximum coincided with the streamflow maximum, whereas the snowmelt maximum preceded them. The major ions in meltwater were preferentially eluted from the snowpack, and meltwater was dominated by calcium, sulfate, and nitrate. The concentration decreases observed in snowmelt are partially reflected in stream water. Groundwater was dominated by calcium and generally bicarbonate. Concentrations of weathering products (silica, alkalinity, and base cations) increased down gradient, consistent with an increase in water residence time. A watershed mass balance for 1992 and 1993 indicates that (1) a major percentage of the primarily atmospherically derived N-species are retained by the watershed, (2) the watershed is the major source of base cations and silica, and (3) for the 2 year combined, atmospheric deposition balances stream water transport of sulfate and chloride.

Biogeochemistry of seasonally snow-covered catchme↗

Selected bibliography on subsidence processes and related engineering problems in carbonate rocks

The Solution Subsidence and Collapse project is a U.S. Geological Survey research activity funded by the Reactor Hazards Research program. The objective of the study is to determine the geologic and hydrologic controls and mechanisms of ground subsidence in soluble rock terranes caused by natural processes and man's activities. The results of the research will be used for the general geologic characterization of proposed and existing nuclear reactor sites in regions underlain by soluble rocks. In addition, the knowledge gained from the study will be applied to defining potential geologic hazards in soluble rock areas where ground subsidence or collapse can occur. The Solution Subsidence and Collapse project is divided into two study units, one looking at subsidence in evaporitic terranes, the other in carbonate terranes. Each of the two geologic environments has its own unique set of conditions that lead to subsidence and, therefore, each warrants its own special study. As part of the subsidence study a selected bibliography covering various topics on ground subsidence in carbonate karst terranes was compiled and is presented here. The entries in the bibliography are placed in five categories: (1) General; (2) Geology, Geomorphology, Hydrology; (3) Caves, Solution Channels; (4) Subsidence, Sinkholes; and (5) Engineering, Land Use, Detection. A separate bibliography on ground subsidence caused by dissolution and removal of salt and other soluble evaporites has been published as a companion reference to this report (Ege, 1979).

Open-File Report↗

NHDPlus as a geospatial framework for SPARROW modeling

Successful water-resource management requires thorough knowledge and understanding of the relations among water-quality contaminate sources and the factors that affect the transport throughout a hydrologic system. Surface-water modeling is a valuable tool that can be applied to help advance and achieve the understanding of these dynamic relations. Spatially Referenced Regressions on Watershed Attributes (SPARROW) is one such model that uses nonlinear statistical methods to define conceptual and spatial relations among quantities of contaminant sources, monitored contaminant load, aquatic transport processes. NHDPlus Version 2 (V2) is a digital representation of a hydrologic network of streams and associated catchments. The dataset provides the fundamental spatial framework for SPARROW modeling.

Impact Assessment Bulletin↗