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At least 1,171 records · Page 65Linked to original sources
USGS2016

Glass-eel-stage American Eels respond to conspecific odor as a function of concentration

The American Eel Anguilla rostrata has experienced staggering population declines in recent decades and is now the focus of restoration efforts. Studies have demonstrated that olfaction is critical to anguillid behavior and that glass eels (the life stage which migrates inland from saltwater to freshwater) are attracted to conspecific washings. We evaluated conspecific cueing as a potential mechanism for American Eel inland migration coordination by assessing (1) the affinity of glass eels to conspecific washings, (2) the concentration–response relationships, and (3) changes in responsiveness to washings during the glass eel-to-elver transition. In two-choice maze assays, glass eels were attracted to glass eel washings over a wide range of concentrations (0.20–0.40 g of glass eels·L −1 ·h −1 ), and a logarithmic function provided the best fit to the concentration–response relationship. When given a choice between two conspecific washings of higher and lower concentrations, the glass eels generally preferred the higher concentration. Responses to undiluted glass eel washings did not significantly differ among stage-3–7 glass eels, although stage-7 eels were not attracted to the washings, whereas the other stages were. Washing affinity remained similar over the course of several weeks. These results support aspects of the conspecific cueing hypothesis at the glass eel life stage under laboratory conditions, suggesting that conspecific cueing is an important component of migration coordination among juvenile American Eels and warrants additional study.

Transactions of the American Fisheries Society↗
USGS2016

Recovery of sockeye salmon in the Elwha River, Washington, after dam removal: Dependence of smolt production on the resumption of anadromy by landlocked kokanee

Pacific salmon Oncorhynchus spp. are adept at colonizing habitat that has been reopened to anadromous passage. Sockeye Salmon O. nerka are unique in that most populations require lakes to fulfill their life history. Thus, for Sockeye Salmon to colonize a system, projects like dam removals must provide access to lakes. However, if the lakes contain landlocked kokanee (lacustrine Sockeye Salmon), the recovery of Sockeye Salmon could be mediated by interactions between the two life history forms and the processes associated with the resumption of anadromy. Our objective was to evaluate the extent to which estimates of Sockeye Salmon smolt production and recovery are sensitive to the resumption of anadromy by kokanee after dam removal. We informed the analysis based on the abiotic and biotic features of Lake Sutherland, which was recently opened to passage after dam removal on the Elwha River, Washington. We first developed maximum expectations for the smolt-producing capacity of Lake Sutherland by using two predictive models developed from Sockeye Salmon populations in Alaska and British Columbia: one model was based on the mean seasonal biomass of macrozooplankton, and the other was based on the euphotic zone volume of the lake. We then constructed a bioenergetics-based simulation model to evaluate how the capacity of Lake Sutherland to rear yearling smolts could change with varying degrees of anadromy among O. nerka fry. We demonstrated that (1) the smolt-producing capacity of a nursery lake for juvenile Sockeye Salmon changes in nonlinear ways with changes in smolt growth, mortality, and the extent to which kokanee resume anadromy after dam removal; (2) kokanee populations may be robust to changes in abundance after dam removal, particularly if lakes are located higher in the watershed on tributaries separate from where dams were removed; and (3) the productivity of newly establishing Sockeye Salmon can vary considerably depending on whether the population becomes rearing limited or is recruitment limited and depending on how adult escapement is managed.

Washington↗
USGS2017

Fall and winter survival of brook trout and brown trout in a north-central Pennsylvania watershed

Stream-dwelling salmonids that spawn in the fall generally experience their lowest survival during the fall and winter due to behavioral changes associated with spawning and energetic deficiencies during this time of year. We used data from Brook Trout Salvelinus fontinalis and Brown Trout Salmo trutta implanted with radio transmitters in tributaries of the Hunts Run watershed of north-central Pennsylvania to estimate survival from the fall into the winter seasons (September 2012–February 2013). We examined the effects that individual-level covariates (trout species, size, and movement rates) and stream-level covariates (individual stream and cumulative drainage area of a stream) have on survival. Brook Trout experienced significantly lower survival than Brown Trout, especially in the early fall during their peak spawning period. Besides a significant species effect, none of the other covariates examined influenced survival for either species. A difference in life history between these species, with Brook Trout having a shorter life expectancy than Brown Trout, is likely the primary reason for the lower survival of Brook Trout. However, Brook Trout also spawn earlier in the fall than Brown Trout and low flows during Brook Trout spawning may have resulted in a greater risk of predation for Brook Trout compared with Brown Trout, thereby also contributing to the observed differences in survival between these species. Our estimates of survival can aid parameterization of future population models for Brook Trout and Brown Trout through the spawning season and into winter.

Pennsylvania↗
USGS2017

Tributary use by imperiled Flannelmouth and Bluehead Suckers in the upper Colorado River Basin

Habitat alterations and establishment of nonnative fishes have reduced the distributions of Flannelmouth Sucker Catostomus latipinnis and Bluehead Sucker C. discobolus to less than 50% of their historical ranges in the Colorado River basin. Tributaries are sometimes less altered than main-stem habitat in the basin and may be important to support various life history processes, but their role in the maintenance of Flannelmouth Sucker and Bluehead Sucker populations is poorly understood. Using mark–recapture techniques, we show tributaries are important habitat for native suckers in the upper Colorado River basin and report three main findings. First, both Flannelmouth and Bluehead suckers likely respond to a thermal cue that initiates spawning movement patterns. Suckers moved into Coal Creek from the White River beginning in mid-May of 2012 and 2013 to spawn. The majority of sucker spawning movements occurred when water temperatures in White River exceeded 11–14°C and those in Coal Creek were 2.5–4°C warmer, while flows varied between years. Second, based on PIT tag detection arrays, 13–45% of suckers showed spawning site fidelity. Sampling only with fyke nets would have resulted in the conclusion that site fidelity by native suckers was only 1–17%, because nets were less efficient at detecting marked fish. Third, most suckers of both species emigrated from Coal Creek within 48 h after being captured while suckers that were detected only via arrays remained resident for 10–12 d. The posthandling flight response we observed was not anticipated and to our knowledge has not been previously reported for these species. Remote PIT tag antenna arrays allowed for a stronger inference regarding movement and tributary use by these species than what could be achieved using just fyke nets. Tributaries are an important part of Flannelmouth Sucker and Bluehead Sucker life history and thus important to conservation strategies for these species.

Colorado↗
USGS2009

Arsenic in the evolution of earth and extraterrestrial ecosystems

If you were asked to speculate about the form extra-terrestrial life on Mars might take, which geomicrobial phenomenon might you select as a model system, assuming that life on Mars would be ‘primitive’? Give your reasons. At the end of my senior year at Rensselaer Polytechnic Institute in 1968, I took Professor Ehrlich's final for his Geomicrobiology course. The above question beckoned to me like the Sirens to Odysseus, for if I answered, it would take so much time and thought that I would never get around to the exam's other essay questions and consequently, would be “shipwrecked” by flunking the course. So, I passed it up. With this 41-year perspective in mind, this manuscript is now submitted to Professor Ehrlich for (belated) “extra-credit.” R.S. Oremland

Geomicrobiology Journal↗
USGS2010

Model-based estimation of individual fitness

Fitness is the currency of natural selection, a measure of the propagation rate of genotypes into future generations. Its various definitions have the common feature that they are functions of survival and fertility rates. At the individual level, the operative level for natural selection, these rates must be understood as latent features, genetically determined propensities existing at birth. This conception of rates requires that individual fitness be defined and estimated by consideration of the individual in a modelled relation to a group of similar individuals; the only alternative is to consider a sample of size one, unless a clone of identical individuals is available. We present hierarchical models describing individual heterogeneity in survival and fertility rates and allowing for associations between these rates at the individual level. We apply these models to an analysis of life histories of Kittiwakes ( Rissa tridactyla ) observed at several colonies on the Brittany coast of France. We compare Bayesian estimation of the population distribution of individual fitness with estimation based on treating individual life histories in isolation, as samples of size one (e.g. McGraw & Caswell, 1996).

Brittany Coast↗
USGS2019

Invertebrate prey contributions to juvenile Coho Salmon diet from riparian habitats along three Alaska streams: Implications for environmental change

Stream fish rely on a mix of terrestrial and aquatic prey sources. While the importance of terrestrial invertebrates as a food source for stream fish is well documented, the role of aquatic insects that emerge from the stream as winged adult insects (aquatic winged adults) and return to the stream as prey is less understood. In this study we determined the proportion of total diet for stream-rearing juvenile Coho Salmon ( Oncorhynchus kisutch) that is derived from terrestrial and aquatic winged adult invertebrates which enter the stream from riparian habitats and consider how those cross-ecosystem prey contributions vary based on riparian habitat type. Study reaches were identified in three streams within the Kenai River watershed of Alaska that were representative of habitats found throughout the region and riparian vegetation was classified into grass/sedge, shrub and tree types using LiDAR. Juvenile Coho Salmon stomach contents were sampled seasonally in study reaches over a two-year period and ingested invertebrates were identified by taxa, life stage and origin. Our results showed that aquatic winged adult prey contributions to juvenile salmon diet were significantly lower in the grass/sedge study reach, and cross-ecosystem invertebrate prey represented a significantly higher proportion of juvenile salmon diet in the tree study reach. Invertebrate prey in the grass/sedge reach were composed primarily of the larval life stage of aquatic winged adults. These results suggest that change in riparian vegetation from tree/shrub to grass/sedge along Kenai streams as projected by regional climate change models, or that results from anthropogenic modification, will likely lead to lower availability of cross-ecosystem prey for stream fish. Management of riparian buffers along streams to preserve or increase occurrence of trees and shrubs is likely to help mitigate impacts of those possible changes.

Alaska↗
USGS2024

Hatch timing of largemouth bass: Implications for recruitment at the northern edge of their native range

Climate-related shifts in hatch timing could mean that age-0 largemouth bass Micropterus salmoides in north temperate lakes reach larger sizes and experience higher survival, which may contribute to increased prevalence of this species in many lakes. However, information on age-0 largemouth bass life history is lacking for these lakes. We estimated hatch dates, daily growth rates (DGR), and length-based probability of piscivory of age-0 largemouth bass in Wisconsin lakes to: (1) provide baseline data on early life history; (2) compare hatch timing between years with different spring temperature regimes, and (3) project how shifts in hatch timing might influence total length (TL) distributions of age-0 bass if mean DGR remained constant. Most age-0 largemouth bass (>90%) collected from ten Wisconsin lakes ( N = 746) hatched between 23 May and 24 June during 2012 and 2013 and did not switch to piscivory during their first summer. Prevalence of positive correlations (16 of 24 lake-year pairings) between TL in and age indicates hatch timing may influence TLs attained by age-0 largemouth bass in August in some lake-years. Mean daily water temperatures in May 2012 were 3.1 °C warmer than in May 2013 for the five of the six lakes where hatch dates were estimated in both years. On average, earliest and median hatch dates for age-0 largemouth bass in these six lakes were 10–11 d earlier in 2012 than in 2013 and hatch duration was approximately 8 d longer in 2012. Despite differences in hatch timing, mean DGR was relatively consistent (range = 0.61–0.74 mm/d) between lakes and years. Simple simulations suggest that earlier hatch dates could result in more age-0 largemouth bass reaching TLs associated with piscivory and overwinter survival by the end of their first summer if growth rates did not change, which could translate to higher recruitment.

Wisconsin↗
USGS2011

Biology, status, and management of the yellowstone cutthroat trout

Yellowstone cutthroat trout Oncorhynchus clarkii bouvieri were historically distributed in the Yellowstone River drainage (Montana and Wyoming) and the Snake River drainage (Wyoming, Idaho, Utah, Nevada, and probably Washington). Individual populations evolved distinct life history characteristics in response to the diverse environments in which they were isolated after the last glaciation. Anthropogenic activities have resulted in a substantial decline (42% of the historical range is currently occupied; 28% is occupied by core [genetically unaltered] populations), but the number of extant populations, especially in headwater streams, has precluded listing of this taxon under the Endangered Species Act. Primary threats to persistence of Yellowstone cutthroat trout include (1) invasive species, resulting in hybridization, predation, disease, and interspecific competition; (2) habitat degradation from human activities such as agricultural practices, water diversions, grazing, dam construction, mineral extraction, grazing, timber harvest, and road construction; and (3) climate change, including an escalating risk of drought, wildfire, winter flooding, and rising temperatures. Extirpation of individual populations or assemblages has led to increasing isolation and fragmentation of remaining groups, which in turn raises susceptibility to the demographic influences of disturbance (both human and stochastic) and genetic factors. Primary conservation strategies include (1) preventing risks associated with invasive species by isolating populations of Yellowstone cutthroat trout and (2) connecting occupied habitats (where possible) to preserve metapopulation function and the expression of multiple life histories. Because persistence of isolated populations may be greater in the short term, current management is focused on isolating individual populations and restoring habitats; however, this approach implies that humans will act as dispersal agents if a population is extirpated because of stochastic events.

Idaho, Montana, Utah, Wyoming↗
USGS2013

Disinfection of three wading boot surfaces infested with New Zealand mudsnails

New Zealand mudsnails Potamopyrgus antipodarum (NZMS) have been introduced into many continents and are easily transported live while attached to wading and other field gear. We quantified the relative attachment by different life stages of NZMS to felt, neoprene, and rubber-soled boots exposed to two densities of NZMS in experimental exposure totes. Attachment by NZMS occurred on boots of all surfaces, but the highest numbers of all life stages occurred on boots with felt surfaces. We found a 15–20-min bath application of 20 g/L Virkon Aquatic was a reliable tool to disinfect boot surfaces infested with NZMS and other aquatic invertebrates. Our studies support that spray application of this disinfectant was not reliable to provide complete mortality of attached adult NZMS or neonates. Wading gear surfaces exposed to repeated bath disinfections showed little deterioration. Our results provide strong evidence that bath disinfections with Virkon Aquatic are helpful to assure biosecurity in field and hatchery settings, but applications should be coupled with cleaning procedures to remove organic materials that can deactivate the reagent.

North American Journal of Fisheries Management↗
USGS2007

Input, flux, and persistence of six select pesticides in San Francisco Bay

Temporal patterns of pesticide inputs to San Francisco Bay were identified and correlated with timing of application and transport mechanism. Fluxes were calculated from measured concentrations and estimated flow. Persistence of the pesticides under typical riverine or estuarine conditions were estimated from laboratory experiments. Simazine was detected most frequently and had the highest flux into the Bay, which could be explained by its continuous use and long half-life. In comparison, diazinon was detected at lower concentrations and had a lower flux which corresponded to its lower use and shorter half-life. The order-of-magnitude lower fluxes of carbofuran and methidathion corresponded to their lower use and expected hydrolysis. Molinate was detected at the highest concentration but its flux was lower than expected, considering its very high use and persistence in the laboratory experiments. Additional loss of molinate is likely to occur from volatilization and photodegradation on the rice fields. Although thiobencarb had the second highest use, it had the lowest flux of the six pesticides, which can be attributed to its loss via hydrolysis, photodegradation, volatilization, and sorption to sediments. Fluxes into San Francisco Bay were equal to or greater than those reported for other estuaries, except for the Gulf of Mexico.

California↗
USGS2016

A resilience approach can improve anadromous fish restoration

Most anadromous fish populations remain at low levels or are in decline despite substantial investments in restoration. We explore whether a resilience perspective (i.e., a different paradigm for understanding populations, communities, and ecosystems) is a viable alternative framework for anadromous fish restoration. Many life history traits have allowed anadromous fish to thrive in unimpacted ecosystems but have become contemporary curses as anthropogenic effects increase. This contradiction creates a significant conservation challenge but also makes these fish excellent candidates for a resilience approach. A resilience approach recognizes the need to maintain life history, population, and habitat characteristics that increase the ability of a population to withstand and recover from multiple disturbances. To evaluate whether a resilience approach represents a viable strategy for anadromous fish restoration, we review four issues: (1) how resilience theory can inform anadromous fish restoration, (2) how a resilience-based approach is fundamentally different than extant anadromous fish restoration strategies, (3) ecological characteristics that historically benefited anadromous fish persistence, and (4) examples of how human impacts harm anadromous fish and how a resilience approach might produce more successful outcomes. We close by suggesting new research and restoration directions for implementation of a resilience-based approach.

Fisheries↗
USGS2016

Anticipated water quality changes in response to climate change and potential consequences for inland fishes

Healthy freshwater ecosystems are a critical component of the world's economy, with a critical role in maintaining public health, inland biological diversity, and overall quality of life. Globally, our climate is changing, with air temperature and precipitation regimes deviating significantly from historical patterns. Healthy freshwater ecosystems are a critical component of the world's economy, with a critical role in maintaining public health, inland biological diversity, and overall quality of life. Globally, our climate is changing, with air temperature and precipitation regimes deviating significantly from historical patterns. Changes anticipated with climate change in the future are likely to have a profound effect on inland aquatic ecosystems through diverse pathways, including changes in water quality. In this brief article, we present an initial discussion of several of the water quality responses that can be anticipated to occur within inland water bodies with climate change and how those changes are likely to impact fishes.

Fisheries↗
USGS2017

Conservation challenges and research needs for Pacific lamprey in the Columbia River Basin

The Pacific Lamprey Entosphenus tridentatus , an anadromous fish native to the northern Pacific Ocean and bordering freshwater habitats, has recently experienced steep declines in abundance and range contractions along the West Coast of North America. During the early 1990s, Native American tribes recognized the declining numbers of lamprey and championed their importance. In 2012, 26 entities signed a conservation agreement to coordinate and implement restoration and research for Pacific Lamprey. Regional plans have identified numerous threats, monitoring needs, and strategies to conserve and restore Pacific Lamprey during their freshwater life stages. Prime among these are needs to improve lamprey passage, restore freshwater habitats, educate stakeholders, and implement lamprey-specific research and management protocols. Key unknowns include range-wide trends in status, population dynamics, population delineation, limiting factors, and marine influences. We synthesize these key unknowns, with a focus on the freshwater life stages of lamprey in the Columbia River basin.

British Columbia, Idaho, Montana, Nevada, Oregon, ↗
USGS2017

Detection of Nanophyetus salmincola in water, snails, and fish tissues by quantitative polymerase chain reaction

We report the development and validation of two quantitative PCR (qPCR) assays to detect Nanophyetus salmincola DNA in water samples and in fish and snail tissues. Analytical and diagnostic validation demonstrated good sensitivity, specificity, and repeatability of both qPCR assays. The N. salmincola DNA copy number in kidney tissue was significantly correlated with metacercaria counts based on microscopy. Extraction methods were optimized for the sensitive qPCR detection of N. salmincola DNA in settled water samples. Artificially spiked samples suggested that the 1-cercaria/L threshold corresponded to an estimated log 10 copies per liter ≥ 6.0. Significant correlation of DNA copy number per liter and microscopic counts indicated that the estimated qPCR copy number was a good predictor of the number of waterborne cercariae. However, the detection of real-world samples below the estimated 1-cercaria/L threshold suggests that the assays may also detect other N. salmincola life stages, nonintact cercariae, or free DNA that settles with the debris. In summary, the qPCR assays reported here are suitable for identifying and quantifying all life stages of N. salmincola that occur in fish tissues, snail tissues, and water.

Journal of Aquatic Animal Health↗
USGS1999

Assessment of offshore New Jersey sources of Beach replenishment sand by diversified application of geologic and geophysical methods

Beach replenishment serves the dual purpose of maintaining a source of tourism and recreation while protecting life and property. For New Jersey, sources for beach sand supply are increasingly found offshore. To meet present and future needs, geologic and geophysical techniques can be used to improve the identification, volume estimation, and determination of suitability, thereby making the mining and managing of this resource more effective. Current research has improved both data collection and interpretation of seismic surveys and vibracore analysis for projects investigating sand ridges offshore of New Jersey. The New Jersey Geological Survey in cooperation with Rutgers University is evaluating the capabilities of digital seismic data (in addition to analog data) to analyze sand ridges. The printing density of analog systems limits the dynamic range to about 24 dB. Digital acquisition systems with dynamic ranges above 100 dB can permit enhanced seismic profiles by trace static correction, deconvolution, automatic gain scaling, horizontal stacking and digital filtering. Problems common to analog data, such as wave-motion effects of surface sources, water-bottom reverberation, and bubble-pulse-width can be addressed by processing. More than 160 line miles of digital high-resolution continuous profiling seismic data have been collected at sand ridges off Avalon, Beach Haven, and Barnegat Inlet. Digital multichannel data collection has recently been employed to map sand resources within the Port of New York/New Jersey expanded dredge-spoil site located 3 mi offshore of Sandy Hook, New Jersey. Multichannel data processing can reduce multiples, improve signal-to-noise calculations, enable source deconvolution, and generate sediment acoustic velocities and acoustic impedance analysis. Synthetic seismograms based on empirical relationships among grain size distribution, density, and velocity from vibracores are used to calculate proxy values for density and velocity. The seismograms are then correlated to the digital seismic profile to confirm reflected events. They are particularly useful where individual reflection events cannot be detected but a waveform generated by several thin lithologic units can be recognized. Progress in application of geologic and geophysical methods provides advantages in detailed sediment analysis and volumetric estimation of offshore sand ridges. New techniques for current and ongoing beach replenishment projects not only expand our knowledge of the geologic processes involved in sand ridge origin and development, but also improve our assessment of these valuable resources. These reconnaissance studies provide extensive data to the engineer regarding the suitability and quantity of sand and can optimize placement and analysis of vibracore samples.Beach replenishment serves the dual purpose of maintaining a source of tourism and recreation while protecting life and property. Research has improved both data collection and interpretation of seismic surveys and vibracore analysis for projects investigating sand ridges offshore of New Jersey. The New Jersey Geological Survey in cooperation with Rutgers University is evaluating the capabilities of digital seismic data to analyze sand ridges. The printing density of analog systems limits the dynamic range to about 24 dB. Digital acquisition systems with dynamic ranges about 100 dB can permit enhanced seismic profiles by trace static correction, deconvolution, automatic gain scaling, horizontal stacking and digital filtering.

Marine Georesources and Geotechnology↗
USGS2008

Effects of salinity on freshwater fishes in coastal plain drainages in the southeastern U.S.

This review focuses on the influence of salinity on freshwater fishes in coastal rivers and estuaries of the southeastern U.S. Influences of salinity on freshwater fish species can be explained partly through responses evidenced by behavior, physiology, growth, reproduction, and food habits during all aspects of life history. Factors influencing the rate of salinity change affect the community structure and dynamics of freshwater fishes in brackish environments. Our understanding of the relation between salinity and the life history of freshwater fishes is limited because little ecological research has been conducted in low-salinity habitats that we consider an “interface” between freshwater streams and the estuary proper. Much of the available data are descriptive in nature and describe best general patterns, but more specific studies are required to better determine the influence of salinity on freshwater fishes. Improved understanding of the influence of human-induced changes on the productivity and viability of these important systems will require a new research focus.

Reviews in Fisheries Science↗
USGS2019

Integrative taxonomy reveals a new species of freshwater mussel, Potamilus streckersoni sp. nov. (Bivalvia: Unionidae): Implications for conservation and management

Inaccurate systematics confound our ability to determine evolutionary processes that have led to the diversification of many taxa. The North American freshwater mussel tribe Lampsilini is one of the better-studied groups in Unionidae, however, many supraspecific relationships between lampsiline genera remain unresolved. Two genera previously hypothesized to be non-monophyletic that have been largely overlooked are Leptodea and Potamilus . We set out to resolve supraspecific relationships in Lampsilini and test the monophyly of Leptodea and Potamilus by integrating molecular, morphological, and life history data. Our molecular matrix consisted of four loci: cytochrome c oxidase subunit 1 (CO1), NADH dehydrogenase subunit 1 (ND1), internal transcribed spacer 1 (ITS1), and 28S ribosomal RNA . Secondly, we performed both traditional and Fourier shape morphometric analyses to evaluate morphological differences and finally, we compared our results with available life history data. Molecular data supported the paraphyly of both Leptodea and Potamilus , but nodal support was insufficient to make any conclusions regarding generic-level assignments at this time. In contrast, inference from our integrative taxonomic assessment depicts significant support for the recognition of a new species, Potamilus streckersoni sp. nov., the Brazos Heelsplitter. Our data show clear separation of three taxonomic entities in the P. ohiensis species complex: P. amphichaenus , P. ohiensis , and P. streckersoni sp. nov.; all molecularly, geographically, and morphologically diagnosable. Our findings have profound implications for unionid taxonomy and will aid stakeholders in establishing effective conservation and management strategies. http://www.zoobank.org/urn:lsid:zoobank.org:pub:502647C0-418B-4CC4-85A8-BD89FC3F674F

Systematics and Biodiversity↗