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At least 1,135 records · Page 63Linked to original sources

Attempts to identify Clostridium botulinum toxin in milk from three experimentally intoxicated Holstein cows

Three adult lactating Holstein cows were injected in the subcutaneous abdominal vein with 175 ng/kg of body weight of Clostridium botulinum type C toxin (451 cow median toxic doses) to determine if this botulinum toxin crosses the blood–milk barrier. Whole blood (in sodium heparin) and clotted blood serum samples were taken at 0 min, 10 min, and 3, 6, 9, and 12 h postinoculation. Milk samples were taken at 0 min and at 3, 6, 9 and 12 h postinoculation. All samples were tested for the presence of the toxin using the mouse bioassay and immunostick ELISA test. The immunostick ELISA identified the toxin in whole blood and the mouse bioassay identified the toxin in serum at all times examined in all 3 animals. Toxin was not identified by either detection method in milk samples collected from the 3 animals. From these results, it appears that Clostridium botulinum type C toxin does not cross from the blood to the milk in detectable concentrations.

Journal of Dairy Science↗

Assessing effects of stocked trout on nongame fish assemblages in southern Appalachian Mountain streams

Fisheries managers are faced with the challenge of balancing the management of recreational fisheries with that of conserving native species and preserving ecological integrity. The negative effects that nonnative trout species exert on native trout are well documented and include alteration of competitive interactions, habitat use, and production. However, the effects that nonnative trout may exert on nongame fish assemblages are poorly understood. Our objectives were to quantify the effects of trout stocking on native nongame fish assemblages intensively on one newly stocked river, the North Toe River, North Carolina, and extensively on other southern Appalachian Mountain streams that are annually stocked with trout. In the intensive study, we adopted a before-after, control-impact (BACI) experimental design to detect short-term effects on the nongame fish assemblage and found no significant differences in fish density, species richness, species diversity, or fish microhabitat use associated with trout stocking. We observed differences in fish microhabitat use between years, however, which suggests there is a response to environmental changes, such as the flow regime, which influence available habitat. In the extensive study, we sampled paired stocked and unstocked stream reaches to detect long-term effects from trout stocking; however, we detected no differences in nongame fish density, species richness, species diversity, or population size structure between paired sites. Our results revealed high inherent system variation caused by natural and anthropogenic factors that appear to overwhelm any acute or chronic effect of stocked trout. Furthermore, hatchery-reared trout may be poor competitors in a natural setting and exert a minimal or undetectable impact on native fish assemblages in these streams. These findings provide quantitative results necessary to assist agencies in strategic planning and decision making associated with trout fisheries, stream management, and conservation of native fishes.

Transactions of the American Fisheries Society↗

Characterization of fish assemblages in eleven multi-use reservoirs from North Carolina, USA

Managing impounded river systems is a recurring challenge for aquatic resource professionals because reservoirs serve multiple functions with different ecological and socioeconomic outcomes. However, research on fishes in reservoirs has disproportionally focused on recreationally and economically important species, with less attention directed toward fish assemblages despite the potential for management at the assemblage level. As such, evaluation of relationships between reservoir fish assemblages and biotic and abiotic factors and testing whether assemblage structure is affected by changing environmental conditions may deepen ecological understanding and provide insights for reservoir fisheries management. Our overall objective was to assess these relationships in 11 reservoirs from North Carolina, USA. We sampled fish assemblages in the reservoirs, which spanned five river basins representing a range of habitat conditions, using experimental gillnets and pulsed DC nighttime electrofishing. Multivariate statistical analyses indicated that taxonomic differences in fish assemblage composition among river basins followed a gradient of productivity. The top contributing species to reservoir dissimilarity were bluegill ( Lepomis macrochirus ), gizzard shad ( Dorosoma cepedianum ), black crappie ( Pomoxis nigromaculatus ), and white perch ( Morone americana ). These four species were positively associated with factors that reflect increasing eutrophic conditions in the 11 reservoirs and could, therefore, serve as indicators of reservoir productivity, anthropogenic influence, and fish assemblage structure, in addition to their key role in reservoir fisheries management. Whereas ­fisheries research has historically focused on assessing fish ­populations, our results illustrate the ecological and management insights derived from simultaneously collecting assemblage- and population-level data. Research on reservoir fish assemblages in relation to biotic and abiotic conditions may help advance fish ecology and management alike.

North Carolina↗

Bridging theory and practice to inform seed selection for restoration

Introduction Land managers often face the critical decision of what plant materials to select for ecological restoration. Selection depends on factors that span ecological conditions and human interventions in the restoration process, which can strongly influence the recovery of a degraded ecosystem. Objectives To improve the seed selection process, we compared scientific literature and guidance from five federal agencies to bridge seed selection “theory” and “practice” in the interior western and central United States. Methods We extracted recurring themes and keywords associated with abiotic, biotic, land management, and producer practices that influence seed selection and analyzed their proportional use between agency guidance and scientific literature. Results We identified significant overlap between key concepts in guidance and literature, highlighting the interconnectedness between science and management. However, nuanced patterns emerged across seed selection themes, including more focus in the literature on local adaptation and genetic structure, ramifications of introducing gene flow and artificial selection during plant production, and provenancing strategies to address changing climatic conditions. In contrast, agency guidance focused on genetically appropriate and environmentally suitable seed selection and practical concerns, including seed cost, availability, and diversity. Seed selection studies in the literature were concentrated in the Great Basin and Colorado Plateau, scattered in the Great Plains, and were largely experimental. Conclusions Our review suggests new opportunities for co-production of science and decision-making frameworks among researchers, land managers, and seed producers to inform seed selection guidance for restoration.

Restoration Ecology↗

Monitoring Inland Storm Surge and Flooding from Hurricane Rita

Pressure transducers (sensors) and high-water marks were used to document the inland water levels related to storm surge generated by Hurricane Rita in southwestern Louisiana and southeastern Texas. On September 22-23, 2005, an experimental monitoring network of sensors was deployed at 33 sites over an area of about 4,000 square miles to record the timing, extent, and magnitude of inland hurricane storm surge and coastal flooding. Sensors were programmed to record date and time, temperature, and barometric or water pressure. Water pressure was corrected for changes in barometric pressure and salinity. Elevation surveys using global-positioning systems and differential levels were used to relate all storm-surge water-level data, reference marks, benchmarks, sensor measuring points, and high-water marks to the North American Vertical Datum of 1988 (NAVD 88). The resulting data indicated that storm-surge water levels over 14 feet above NAVD 88 occurred at three locations, and rates of water-level rise greater than 5 feet per hour occurred at three locations near the Louisiana coast.

Fact Sheet↗

Water conditioning and whooping crane survival after release in Florida

About 50% of the whooping cranes (Grus americana) released in Florida die within the first year of release. Most of these deaths and those in subsequent years result from bobcat (Lynx rufus) predation. Choosing release sites in open marshes away from bobcat habitat has improved survival. We hypothesized that exposure to ponds (water conditioning) at the rearing site would encourage birds to roost in deeper water marshes after release and such exposure would thereby reduce bobcat predation. In this study, we moved young birds (ca 50 days of age) to netted pens with large (15-m diameter), deep 30-60 cm) naturally vegetated ponds. We randomly assigned the costume-reared whooping cranes into 2 equal-sized groups at fledging. Some groups were placed in pens with a pond (experimental or ponded groups) and the others we reared without additional water exposure (control groups). All birds in the pens with ponds used the water. At night, they roosted at a depth of 36-46 cm. During the day, the birds used the ponds as well as other areas of the pen. We released 3 pairs of water-conditioned and control cohorts, 1 set in 1995 and 2 in 1996. No obvious behavioral differences were noted between the cohorts released in those years. Controls survived as expected (about 60% first year survival). The water-conditioned birds had much higher survival the first year (85%) and continued to survive better for the next 3 years.

Book chapter↗

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2022 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance, 2015; Breed et al., 2018; Winkler et al., 2018; NASEM, 2023). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where low and highly variable precipitation is standard. Providing this information requires synergistic research efforts in which results from earlier investigations inform the design of subsequent investigations. The U.S. Geological Survey (USGS) Southwest Biological Science Center’s (SBSC’s) research activities to support CPNPP in FY22 followed the FY22 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Biden-Harris Administration Executive Order 14008 (Tackling the Climate Crisis at Home and Abroad), and Department of Interior Priority #4 (Working to conserve at least 30% each of our lands and waters by the year 2030). Research activities in FY22 centered on landscape genomics, monitoring common garden and seeding experiments near Vernal and Moab, UT, conducting experimental treatments using the GRID (Germination for Restoration Information and Decision-making) framework, and continuing newer genetics projects to investigate the impact of productions techniques on plant materials and restoration treatments on native plant communities. These activities were supported by two biological science technicians. The effects of the SARS-CoV-2 pandemic were less visible in FY22, allowing SBSC to catch up on backlogged laboratory work. The overall progress of SBSC’s research remains on track with respect to the 5-year plan. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY22, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, and Daniel Winkler, spent a considerable amount of time providing expertise and support for individual projects. Work activities performed in support of each 5-year plan goal are discussed in turn.

Colorado Plateau↗

Rheology of the lithosphere

During the quadrennial term 1979–1982, major advances have been made in our knowledge of the rheology of the oceanic lithosphere by the skillful combination of experimental and theoretical rock mechanics, seismology and marine geophysics in increasingly sophisticated models for the flexure of the oceanic lithosphere at seamounts and island chains, along transform faults, and at subduction zones. The relative simplicity of plate bending geometry, thermal history, and mineralogical and chemical compositions of the oceanic plates in these settings make the geophysical observations very powerful constraints on the in situ rheology of the oceanic lithosphere. In the first part of this paper, I review the laboratory work on materials appropriate to the oceanic lithosphere with emphasis on contributions during the quadrennial period and the need for future work. The important results of flexure models incorporating realistic material properties are then summarized.

Reviews of Geophysics and Space Physics↗

Combined use of the ASK and SHK-1 cell lines to enhance the detection of infectious salmon anemia virus

Infectious salmon anemia (ISA) is a severe disease primarily affecting commercially farmed Atlantic salmon (Salmo salar) in seawater. The disease has been reported in portions of Canada, the United Kingdom, the Faroe Islands, and the United States. Infectious salmon anemia virus (ISAV), the causative agent of ISA, has also been isolated from several asymptomatic marine and salmonid fish species. Diagnostic assays for the detection of ISAV include virus isolation in cell culture, a reverse transcriptase-PCR, an enzyme-linked immunosorbent assay, and an indirect fluorescent antibody test. Virus isolation is considered the gold standard, and 5 salmonid cell lines are known to support growth of ISAV. In this study, the relative performance of the salmon head kidney 1 (SHK-1), Atlantic salmon kidney (ASK), and CHSE-214 cell lines in detecting ISAV was evaluated using samples from both experimentally and naturally infected Atlantic salmon. Interlaboratory comparisons were conducted using a quality control-quality assurance ring test. Both the ASK and SHK-1 cell lines performed well in detecting ISAV, although the SHK-1 line was more variable in its sensitivity to infection and somewhat slower in the appearance of cytopathic effect. Relative to the SHK-1 and ASK lines, the CHSE-214 cell line performed poorly. Although the ASK line appeared to represent a good alternative to the more commonly used SHK-1 line, use of a single cell line for diagnostic assays may increase the potential for false-negative results. Thus, the SHK-1 and ASK cell lines can be used in combination to provide enhanced ability to detect ISAV.

Journal of Veterinary Diagnostic Investigation↗

Low rate of population establishment of a freshwater invertebrate (Gammarus lacustris) in experimental conservation translocations

Conservation translocations may be a useful tool for the restoration of declining freshwater invertebrates, but they are poorly represented in the literature. We conducted a before-after/control-impact (BACI) experiment to test the efficacy of conservation translocation for re-establishing abundant populations of the amphipod Gammarus lacustris , a declining species and wildlife food resource in depressional wetlands in the upper Midwest of the United States of America. Each study site ( n = 19) contained at least one treatment wetland receiving translocated G. lacustris from a local donor and one control wetland. We selected study wetlands based on a suite of wetland characteristics and randomly assigned recipient versus control treatment. Gammarus lacustris was detected post-translocation at only 2 of 22 recipient wetlands (1 of 19 sites). Overall, there was a statistical increase in G. lacustris density in recipient wetlands compared to controls; however, the results were of minimal biological significance due to being driven by a single site with low G. lacustris densities. Accordingly, our results suggest that future conservation translocations of amphipods might be successful if limited to recently restored wetlands or informed by a more complex habitat suitability model to differentiate dispersal limitations from habitat limitations. To develop such a model would involve identifying the fewest, most influential physical and biological factors (e.g. wetland size/structure, fish, aquatic vegetation, and water chemistry) from the numerous inter-related factors that correlate with the abundance of naturally occurring G. lacustris ; candidate wetlands to receive amphipods would be those for which the model predicts abundant G. lacustris but in which they do not presently occur.

Minnesota↗

Susceptibility of Arctic char to experimental challenge with Infectious Hematopoietic Necrosis Virus (IHNV) and Infectious Pancreatic Necrosis Virus (IPNV)

Arctic char Salvelinus alpinus were exposed to the fish pathogens infectious hematopoietic necrosis virus (IHNV) and infectious pancreatic necrosis virus (IPNV) to estimate susceptibility of the species to infection. Fish were immersion challenged at 46, 74, and 95 d posthatch for 5 h in viral concentration of 10 3 or 10 5 PFU(plaque-forming units)/mL and were monitored for 21 d postchallenge. Fish that died were assayed individually for virus-associated mortality, and survivors were assayed individually to estimate prevalence of virus carrier status. Arctic char succumbed to IHNV infection with population losses as high as 41%, and prevalence of IHNV carriers in surviving fish was 24% or less with virus titers in carrier fish ranging from 2.5 × 10 2 PFU/g to greater than 1.3 × 10 6 PFU/g. Infections with IPNV resulted in losses of 20% or less, and prevalence of IPNV carriers in surviving fish was as high as 82% with virus titers in carrier fish ranging from 2.5 × 10 2 PFU/g to greater than 5.0 × 10 6 PFU/g. Logistic regression models were developed for the mortality and infection data for each virus. For IHNV, the odds of dying or becoming infected were significantly greater for the fish from the 74-d age-group than for the fish from the 46-d or 95-d age-groups. Fish exposed to 10 5 PFU of IHNV/mL had significantly greater odds of dying or becoming infected than fish exposed to 10 3 PFU/mL. For IPNV, the odds of dying were significantly greater for the 74-d age-group compared with the other two age-groups. The 74-d fish were also significantly more likely to become infected than the 95-d-old fish. Fish exposed to 10 5 PFU of IPNV/mL had significantly greater odds of dying or becoming infected than fish exposed to 10 3 PFU of IPNV /mL.

Journal of Aquatic Animal Health↗

Burrowing, byssus, and biomarkers: behavioral and physiological indicators of sublethal thermal stress in freshwater mussels (Unionidae)

Recent research has elucidated the acute lethal effects of elevated water temperatures to glochidia (larvae), juvenile, and adult life stages of freshwater mussels (Order Unionida), but few studies have focused on sublethal effects of thermal stress. We evaluated the sublethal effects of elevated temperature on burrowing behavior and byssus production in juveniles, and on enzymatic biomarkers of stress in adults in acute (96 h) laboratory experiments in sediment, with two acclimation temperatures (22 and 27 °C) and two experimental water levels (watered and dewatered) as proxies for flow regime. Increasing temperature significantly reduced burrowing in all five species tested, and the dewatered treatment (a proxy for drought conditions) reduced burrowing in all but Amblema plicata . Production of byssal threads was affected most drastically by flow regime, with the probability of byssus presence reduced by 93–99% in the dewatered treatment, compared to the watered treatment (a proxy for low flow conditions); increasing temperature alone reduced byssus by 18–35%. Alanine aminotransferase and aspartate aminotransferase were significantly affected by treatment temperature in the 27 °C acclimation, watered test ( p =  0.04 and 0.02, respectively). Our results are important in the context of climate change, because stream temperature and flow are expected to change with increasing air temperature and altered precipitation patterns.

Marine and Freshwater Behaviour and Physiology↗

Delayed incubation leads to hatching failure of a Burrowing Owl ( Athene cunicularia ) nest

Birds face strong selective pressures to complete individual nesting attempts as quickly as possible to minimize exposure of nests to predators and weather, maximize renesting potential, and maximize hatching success. As a result, the duration of developmental periods and of overall nest periods are often relatively constant within species. However, birds may sometimes be subject to acute energetic constraints that may preclude them from initiating incubation at the optimal time. We report an extraordinary case of delayed incubation by a female Burrowing Owl ( Athene cunicularia ) in Oregon, USA, which contrasted sharply with a large sample of nests monitored by motion-activated video cameras in western North America from 2015 to 2018. The focal female delayed incubation by 11 d following clutch completion and subsequently experienced near total hatching failure of her clutch. This observation corroborates previous experimental studies regarding the limits to egg viability and trade-offs between the timing of incubation onset and hatching success. These findings illustrate the acute trade-offs faced by nesting birds, and the cost of delayed incubation that we observed in this owl could help explain the cause of asynchronous hatching.

Oregon↗

Approaches for the direct estimation of rate of increase in population size using capture-recapture data

Recent developments in the modeling of capture-recapture data permit the direct estimation and modeling of population growth rate Pradel (1996). Resulting estimates reflect changes in numbers of birds on study areas, and such changes result from movement as well as survival and reproductive recruitment. One measure of the 'importance' of a demographic vital rate to population growth is based on temporal covariation (i.e., do changes in population growth follow changes in vital rates). If data are available to estimate vital rates or their components, then such data can be combined with capture-recapture data in order to estimate parameters of the relationship between population growth and the vital rate. These methods are illustrated using capture-recapture and nest observation data for Black-throated Blue Warblers, Dendroica caerulescens, from a long-term study at Hubbard Brook Experimental Forest, New Hampshire, USA. Population growth rate was found to be positively associated with the proportion of birds that double-brood. We encourage use of these methods and believe they will prove to be very useful in research on, and management of, migratory bird populations.

Book chapter↗

Hybrid modeling of spatial continuity for application to numerical inverse problems

A novel two-step modeling approach is presented to obtain optimal starting values and geostatistical constraints for numerical inverse problems otherwise characterized by spatially-limited field data. First, a type of unsupervised neural network, called the self-organizing map (SOM), is trained to recognize nonlinear relations among environmental variables (covariates) occurring at various scales. The values of these variables are then estimated at random locations across the model domain by iterative minimization of SOM topographic error vectors. Cross-validation is used to ensure unbiasedness and compute prediction uncertainty for select subsets of the data. Second, analytical functions are fit to experimental variograms derived from original plus resampled SOM estimates producing model variograms. Sequential Gaussian simulation is used to evaluate spatial uncertainty associated with the analytical functions and probable range for constraining variables. The hybrid modeling of spatial continuity is demonstrated using spatially-limited hydrologic measurements at different scales in Brazil: (1) physical soil properties (sand, silt, clay, hydraulic conductivity) in the 42 km 2 Vargem de Caldas basin; (2) well yield and electrical conductivity of groundwater in the 132 km 2 fractured crystalline aquifer; and (3) specific capacity, hydraulic head, and major ions in a 100,000 km 2 transboundary fractured-basalt aquifer. These results illustrate the benefits of exploiting nonlinear relations among sparse and disparate data sets for modeling spatial continuity, but the actual application of these spatial data to improve numerical inverse modeling requires testing.

Environmental Modelling and Software↗

Stand density, drought, and herbivory constrain ponderosa pine regeneration pulse

Trees in dry forests often regenerate in episodic pulses when wet periods coincide with ample seed production. Factors leading to success or failure of regeneration pulses are poorly understood. We investigated the impacts of stand thinning on survival and growth of the 2013 cohort of ponderosa pine ( Pinus ponderosa Douglas ex P. Lawson & C. Lawson) seedlings in northern Arizona, United States. We measured seedling survival and growth over the first five growing seasons after germination in six stand basal areas (BAs; 0, 7, 14, 23, 34, and 66 (unthinned) m 2 ·ha −1 ) produced by long-term experimental thinnings. Five-year survival averaged 2.5% and varied among BAs. Mean survival duration was longer in intermediate BAs (11 to 16 months) than in clearings and high BAs (5 months). The BAs of 7, 14, and 23 m 2 ·ha −1 had >2600 5-year-old seedlings·ha −1 . In contrast, regeneration was lower in the clearing (666 seedlings·ha −1 ) and failed completely in the 34 m 2 ·ha −1 and unthinned treatments. Seedling survival was highest during wet years and lowest during drought years. Many surviving seedlings had no net height growth between years 4 and 5 because of stem browsing. Results indicate that natural regeneration of ponderosa pine is influenced by stand BA, drought, herbivory, and interactions between extreme climatic events.

Arizona↗

Reestablishing a stepping-stone population of the threatened elkhorn coral Acropora palmata to aid regional recovery

Recovery of the elkhorn coral Acropora palmata is critical to reversing coral reef ecosystem collapse in the western Atlantic, but the species is severely threatened. To gauge potential for the species’ restoration in Florida, USA, we conducted an assisted migration experiment where 50 coral fragments of 5 nursery-raised genetic strains (genets) from the upper Florida Keys were moved to 5 sites across 350 km of the offshore reef. Additionally, 4 fragments from the 1 remaining colony of A. palmata in Dry Tortugas National Park (DRTO) were added to the 2 DRTO experimental sites to test for local adaptation. To measure coral performance, we tracked coral survival, calcification, growth, and condition from May 2018 to October 2019. All 24 corals relocated to the DRTO sites survived and calcified ~85% faster than the fewer surviving corals transplanted to the 2 upper Keys sites. While coral survival across the entire experiment did not depend on genet, there was a weak but statistically significant genetic effect on calcification rate among the corals relocated to DRTO. The DRTO native genet was among the fastest growing genets, but it was not the fastest, suggesting a lack of local adaptation at this scale. Our results indicate that DRTO, a remote reef system inhabited by the species during the Holocene and located at the nexus of major ocean currents, may be a prime location for reestablishing A. palmata . Assisted migration of A. palmata to DRTO could restore a sexually reproducing population in <10 yr, thereby promoting the species’ regional recovery.

Florida↗

Production of hybrids between western gray wolves and western coyotes

Using artificial insemination we attempted to produce hybrids between captive, male, western, gray wolves (Canis lupus) and female, western coyotes (Canis latrans) to determine whether their gametes would be compatible and the coyotes could produce and nurture offspring. The results contribute new information to an ongoing controversy over whether the eastern wolf (Canis lycaon) is a valid unique species that could be subject to the U. S. Endangered Species Act. Attempts with transcervically deposited wolf semen into nine coyotes over two breeding seasons yielded three coyote pregnancies. One coyote ate her pups, another produced a resorbed fetus and a dead fetus by C-section, and the third produced seven hybrids, six of which survived. These results show that, although it might be unlikely for male western wolves to successfully produce offspring with female western coyotes under natural conditions, western-gray-wolf sperm are compatible with western-coyote ova and that at least one coyote could produce and nurture hybrid offspring. This finding in turn demonstrates that gamete incompatibility would not have prevented western, gray wolves from inseminating western coyotes and thus producing hybrids with coyote mtDNA, a claim that counters the view that the eastern wolf is a separate species. However, some of the difficulties experienced by the other inseminated coyotes tend to temper that finding and suggest that more experimentation is needed, including determining the behavioral and physical compatibility of western gray wolves copulating with western coyotes. Thus although our study adds new information to the controversy, it does not settle it. Further study is needed to determine whether the putative Canis lycaon is indeed a unique species.

PLoS ONE↗