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USGS2004

LIDAR optical rugosity of coral reefs in Biscayne National Park, Florida

The NASA Experimental Advanced Airborne Research Lidar (EAARL), a temporal waveform-resolving, airborne, green wavelength LIDAR (light detection and ranging), is designed to measure the submeter-scale topography of shallow reef substrates. Topographic variability is a prime component of habitat complexity, an ecological factor that both expresses and controls the abundance and distribution of many reef organisms. Following the acquisition of EAARL coverage over both mid-platform patch reefs and shelf-margin bank reefs within Biscayne National Park in August 2002, EAARL-based optical indices of topographic variability were evaluated at 15 patch reef and bank reef sites. Several sites were selected to match reefs previously evaluated in situ along underwater video and belt transects. The analysis used large populations of submarine topographic transects derived from the examination of closely spaced laser spot reflections along LIDAR raster scans. At all 15 sites, each LIDAR transect was evaluated separately to determine optical rugosity (Rotran), and the average elevation difference between adjacent points (Av(??E ap)). Further, the whole-site mean and maximum values of Ro tran and Av(??Eap) for the entire population of transects at each analysis site, along with their standard deviations, were calculated. This study revealed that the greater habitat complexity of inshore patch reefs versus outer bank reefs results in relative differences in topographic complexity that can be discerned in the laser returns. Accordingly, LIDAR sensing of optical rugosity is proposed as a complementary new technique for the rapid assessment of shallow coral reefs. ?? Springer-Verlag 2004.

Coral Reefs↗

USGS2010

Soil and periphyton indicators of anthropogenic water-quality changes in a rainfall-driven wetland

Surface soils and periphyton communities were sampled across an oligotrophic, soft-water wetland to document changes associated with pulsed inputs of nutrient- and mineral-rich canal drainage waters. A gradient of canal-water influence was indicated by the surface-water specific conductance, which ranged between 743 and 963 μS cm −1 in the canals to as low as 60 μS cm −1 in the rainfall-driven wetland interior. Changes in soil chemistry and periphyton taxonomic composition across this gradient were described using piecewise regressions models. The greatest increase in soil phosphorus (P) concentration occurred at sites closest to the canal while soil mineral (sulfur, calcium) concentrations increased most rapidly at the lower end of the gradient. Multiple periphyton shifts occurred at the lower end of the gradient and included; (1) a decline in desmids and non-desmid filamentous chlorophytes, and their replacement by a diatom-dominated community; (2) the loss of soft-water diatom indicator species and their replacement by hard-water species. Increased dominance by cyanobacteria and eutrophic diatom indicators occurred closer to the canals. Soil and periphyton changes indicated four zones of increasing canal influence across the wetland: (1) a zone of increasing mineral concentrations where soft-water taxa remained dominant; (2) a transition towards hard-water, oligotrophic diatoms as mineral concentrations increased further; (3) a zone of dominance by these hard-water species; (4) a zone of rapidly increasing P concentrations and dominance by eutrophic taxa. In contrast to conclusions drawn from routine water-chemistry monitoring, measures of chemical and biological change presented here indicate that most of this rainfall-driven peatland receives some influence from canal discharges. These changes are multifaceted and induced by shifts in multiple chemical constituents.

Florida↗

USGS2001

The effects of timber harvesting on the structure and composition of adjacent old-growth coast redwood forest, California, USA

Data collected across timber harvest boundaries on nine sites within the Redwood National and State Park management area in California, USA, were used to estimate the effective size of old-growth coast redwood preserves. Fourteen variables related to stand structure and composition, wildlife habitat, and physical environment were significantly correlated to distance from the timber harvest boundary using multiple regression analysis. A maximum depth of edge influence of 200 m was determined for variables exhibiting a significant correlation to the distance from the harvest edge. A spatial analysis using ArcView indicated that 53% of the old growth preserved within the study area was influenced by edge conditions, leaving 47% as effective old-growth.

Landscape Ecology↗

USGS2014

Desert shrub responses to experimental modification of precipitation seasonality and soil depth: relationship to the two-layer model and ecohydrological niche

1. Ecohydrological niches are important for understanding plant community responses to climate shifts, particularly in dry lands. According to the two-layer hypothesis, selective use of deep-soil water increases growth or persistence of woody species during warm and dry summer periods and thereby contributes to their coexistence with shallow-rooted herbs in dry ecosystems. The resource-pool hypothesis further suggests that shallow-soil water benefits growth of all plants while deep-soil water primarily enhances physiological maintenance and survival of woody species. Few studies have directly tested these by manipulating deep-soil water availability and observing the long-term outcomes. 2. We predicted that factors promoting infiltration and storage of water in deep soils, specifically greater winter precipitation and soil depth, would enhance Artemisia tridentata (big sagebrush) in cold, winter-wet/summer-dry desert. Sagebrush responses to 20 years of winter irrigation were compared to summer- or no irrigation, on plots having relatively deep or shallow soils (2 m vs. 1 m depths). 3. Winter irrigation increased sagebrush cover, and crown and canopy volumes, but not density (individuals/plot) compared to summer or no irrigation, on deep-soil plots. On shallow-soil plots, winter irrigation surprisingly decreased shrub cover and size, and summer irrigation had no effect. Furthermore, multiple regression suggested that the variations in growth were related (i) firstly to water in shallow soils (0-0.2 m) and secondly to deeper soils (> 1 m deep) and (ii) more by springtime than by midsummer soil water. Water-use efficiency increased considerably on shallow soils without irrigation and was lowest with winter irrigation. 4. Synthesis . Sagebrush was more responsive to the seasonal timing of precipitation than to total annual precipitation. Factors that enhanced deep-water storage (deeper soils plus more winter precipitation) led to increases in Artemisia tridentata that were consistent with the two-layer hypothesis, and the contribution of shallow water to growth on these plots was consistent with the resource-pool hypothesis. However, shallow-soil water also had negative effects on sagebrush, suggesting an ecohydrological trade-off not considered in these or related theories. The interaction between precipitation timing and soil depth indicates that increased winter precipitation could lead to a mosaic of increases and decreases in A. tridentata across landscapes having variable soil depth.

Idaho↗

USGS2025

Integrating theory and empirical patterns: Fish body size distributions, life history traits, and environmental flows in streams

Individual size distributions (ISDs) are prominent in ecological research and may support resource managers with ecosystem-scale objectives. We use a database of individual size measurements for US stream fishes to test for direct and indirect effects of traits, flow regimes, and land use on the interspecific ISD exponent. Path analysis indicates that traits have strong, direct effects on ISD. Flow and land use effects on the exponent are largely indirectly mediated by their influences on species traits. ISD exponents increase (abundances of larger-bodied individuals increase, relative to smaller-bodied) when environments favor higher trophic levels, warmer thermal tolerances, and periodic life histories. Alternatively, ISD exponents decrease in systems that favor opportunistic life histories. Our flexible modeling framework that includes direct and indirect effects of traits, flow regimes, and land use on ISD could be expanded to incorporate additional variables that interact with flow (e.g., temperature and physical habitat) to assess of effects of multiple stressors on aquatic ecosystem functioning.

Science Advances↗

USGS2009

Fire treatment effects on vegetation structure, fuels, and potential fire severity in western U.S. forests

Abstract. Forest structure and species composition in many western U.S. coniferous forests have been altered through fire exclusion, past and ongoing harvesting practices, and livestock grazing over the 20th century. The effects of these activities have been most pronounced in seasonally dry, low and mid-elevation coniferous forests that once experienced frequent, low to moderate intensity, fire regimes. In this paper, we report the effects of Fire and Fire Surrogate (FFS) forest stand treatments on fuel load profiles, potential fire behavior, and fire severity under three weather scenarios from six western U.S. FFS sites. This replicated, multisite experiment provides a framework for drawing broad generalizations about the effectiveness of prescribed fire and mechanical treatments on surface fuel loads, forest structure, and potential fire severity. Mechanical treatments without fire resulted in combined 1-, 10-, and 100-hour surface fuel loads that were significantly greater than controls at three of five FFS sites. Canopy cover was significantly lower than controls at three of five FFS sites with mechanical-only treatments and at all five FFS sites with the mechanical plus burning treatment; fire-only treatments reduced canopy cover at only one site. For the combined treatment of mechanical plus fire, all five FFS sites with this treatment had a substantially lower likelihood of passive crown fire as indicated by the very high torching indices. FFS sites that experienced significant increases in 1-, 10-, and 100-hour combined surface fuel loads utilized harvest systems that left all activity fuels within experimental units. When mechanical treatments were followed by prescribed burning or pile burning, they were the most effective treatment for reducing crown fire potential and predicted tree mortality because of low surface fuel loads and increased vertical and horizontal canopy separation. Results indicate that mechanical plus fire, fire-only, and mechanical-only treatments using whole-tree harvest systems were all effective at reducing potential fire severity under severe fire weather conditions. Retaining the largest trees within stands also increased fire resistance. ?? 2009 by the Ecological Society of America.

Ecological Applications↗

USGS2013

Seasonal flux and assemblage composition of planktic foraminifers from a sediment-trap study in the northern Gulf of Mexico

Sediment-trap samples from the northern Gulf of Mexico reveal that Globorotalia truncatulinoides, Neogloboquadrina dutertrei, Pulleniatina spp. (includes P. obliquiloculata and P. finalis), and the Globorotalia menardii group (includes Gt. menardii, Gt. tumida, and Gt. ungulata) generally occur in cold months. Globigerinoides ruber (white and pink varieties) and Globigennoides sacculifer occur throughout the year. The seasonal occurrence of individual taxa of planktic foraminifers in the Gulf of Mexico have important differences with the seasonal occurrence of the same taxa observed in a 6-year sediment-trap dataset from the western Sargasso Sea. Thus information on the ecologic preferences of individual taxa determined in one region cannot necessarily be applied directly to another area. In the northern Gulf of Mexico 90% of the total flux of Globorotalia truncatulinoides tests to sediments occurs in January and February. Mg/Ca and d 18 Ο measurements indicate that nonencrusted forms of Gt. truncatulinoides calcify in the upper-surface-mixed zone. Thus, analyses of nonencrusted Gt. truncatulinoides in sediments of the northern Gulf of Mexico have potential for monitoring past conditions in the winter-surface-mixed layer. The relatively low overall abundance of Globigerinoides ruber (white) in sediment-trap samples is anomalous because Gs. ruber (white) is one of the most abundant foraminifers in>150 µm census data from northern Gulf of Mexico Holocene sediment core samples. Globigerinoides ruber (pink) is a relatively persistent and common component of the sediment-trap samples. Thus Gs. ruber (pink) has potential as a proxy for mean annual sea-surface temperature in the Gulf of Mexico

Journal of Coastal Research↗

USGS2025

Designs for cyanobacterial harmful algal bloom monitoring in the Sacramento–San Joaquin Delta, California

Cyanobacterial harmful algal blooms (CHABs) are a growing concern in freshwater environments. These blooms can lead to degraded water quality, ecosystem disruptions, and public health threats due to the production of potent cyanotoxins. The Sacramento–San Joaquin Delta (California, USA; the Delta) has experienced CHABs since 1999, including CHABs that produce cyanotoxins at concentrations exceeding recreational advisory threshold levels. In response to the CHAB monitoring needs in the Delta, in 2024 a CHAB monitoring strategy for the Sacramento–San Joaquin Delta was released. The CHAB monitoring strategy recommended implementing a comprehensive monitoring program aligned with regional priorities, and this report responds directly to that recommendation. Building on the CHAB monitoring strategy, it describes three example monitoring designs that draw from past studies to address present needs. To develop designs, the report outlines key components and considerations for implementing a CHAB monitoring program in the Delta. It provides: background on monitoring and modeling approaches, an overview of current monitoring programs in the region, guidance for selecting monitoring locations, indicators, and sampling frequencies, and example designs to guide program planning and budgeting. The overarching goal of the report is to help agencies and stakeholders move from high-level recommendations to practical, actionable designs that are tailored to the Delta’s physical, anthropogenic, and ecological landscape.

ESS Open Archive↗

USGS2021

Near-field receiving-water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California—2019

Trace-metal concentrations in sediment and in the clam Limecola petalum (formerly reported as Macoma balthica and M. petalum ), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in south San Francisco Bay, Calif. This report includes the data collected by the U.S. Geological Survey (USGS) for the period January 2019 to December 2019. These data append to long-term datasets extending back to 1974. A major focus of the report is an integrated description of the 2019 data within the context of the longer, multidecadal dataset. This dataset supports the City of Palo Alto’s Near-Field Receiving-Water Monitoring Program, initiated in 1994. Significant reductions in silver and copper contamination occurred at the site in the 1980s following the implementation by PARWQCP of advanced wastewater treatment and source control measures. Since the 1990s, concentrations of these elements in surface sediments have continued to decrease, although more slowly. Silver appears to have stabilized at concentrations about twice the regional background concentration. Presently, sediment copper concentrations appear to be near the regional background level. Over the same period (1994–2019), sedimentary iron and zinc also exhibited modest declines. Sedimentary aluminum, chromium, mercury, nickel, and selenium have not exhibited any trend. Since 1994, concentrations of silver and copper in L. petalum have varied seasonally, apparently in response to a combination of site-specific metal exposures and cyclic growth and reproduction, as reported previously. Seasonal patterns for other elements, including chromium, mercury, nickel, selenium, and zinc, were generally similar in timing and magnitude as those for silver and copper. The annual growth and reproductive cycle explained a small amount of the variance in annual silver and zinc tissue metal concentrations. However, interannual trends are not apparent for any element. Biological effects of elevated silver and copper contamination at the Palo Alto site have been interpreted from data collected during and after the recession of these contaminants. Concentrations of both elements in the soft tissues of L. petalum declined with sedimentary copper and silver. This pattern was associated with changes in the reproductive activity of L. petalum , as well as the structure of the benthic invertebrate community. Reproductive activity of L. petalum increased as metal concentrations in L. petalum declined and presently is stable with almost all animals initiating reproduction in the fall and spawning the following spring. Analyses of the benthic community structure indicate that the infaunal invertebrate community has shifted from one dominated by several opportunistic species when silver and copper exposures were highest to one in which the species abundance is more evenly distributed, a pattern that indicates a more stable community that is subjected to fewer stressors. Importantly, this long-term change is unrelated to other metals and other measured environmental factors, including salinity and sediment composition. In addition, two of the opportunistic species ( Ampelisca abdita and Streblospio benedicti ) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals. Both species had short-lived rebounds in abundance in 2008, 2009, and 2010 and showed signs of increasing abundance in 2019. Heteromastus filiformis (a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying its eggs on or in the sediment) showed a concurrent increase in dominance and, in the last several years before 2008, showed a stable population. H. filiformis abundance increased slightly in 2011–2012 and returned to pre-2011 numbers in 2019. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for deep-dwelling animals like L. petalum . However, within two months of this event, animals returned to the mudflat. The resilience of the community suggested that the disturbance was not caused by a persistent toxin or anoxia. The reproductive mode of most species that were present in 2019 was indicative of species that were available either as pelagic larvae or as mobile adults. Although oviparous species were lower in number in this group, the authors hypothesize that these species will return slowly as more species move back into the area. The use of functional ecology was highlighted in the 2019 benthic community data, which showed that the animals that have now returned to the mudflat are those that can respond successfully to a physical, nontoxic disturbance. Today, community data show a mix of species that consume the sediment, or filter feed, those that have pelagic larvae that must survive landing on the sediment, and those that brood their young. USGS scientists view the 2008 disturbance event as a response by the infaunal community to an episodic natural stressor (possibly sediment accretion or a pulse of freshwater), in contrast to the long-term recovery from metal contamination. We will compare this recovery to the long-term recovery observed after the 1970s when the decline in sediment pollutants was the dominating factor.

California↗

USGS2006

Tests of landscape influence: Nest predation and brood parasitism in fragmented ecosystems

The effects of landscape fragmentation on nest predation and brood parasitism, the two primary causes of avian reproductive failure, have been difficult to generalize across landscapes, yet few studies have clearly considered the context and spatial scale of fragmentation. Working in two river systems fragmented by agricultural and rural-housing development, we tracked nesting success and brood parasitism in >2500 bird nests in 38 patches of deciduous riparian woodland. Patches on both river systems were embedded in one of two local contexts (buffered from agriculture by coniferous forest, or adjacent to agriculture), but the abundance of agriculture and human habitation within 1 km of each patch was highly variable. We examined evidence for three models of landscape effects on nest predation based on (1) the relative importance of generalist agricultural nest predators, (2) predators associated with the natural habitats typically removed by agricultural development, or (3) an additive combination of these two predator communities. We found strong support for an additive predation model in which landscape features affect nest predation differently at different spatial scales. Riparian habitat with forest buffers had higher nest predation rates than sites adjacent to agriculture, but nest predation also increased with increasing agriculture in the larger landscape surrounding each site. These results suggest that predators living in remnant woodland buffers, as well as generalist nest predators associated with agriculture, affect nest predation rates, but they appear to respond at different spatial scales. Brood parasitism, in contrast, was unrelated to agricultural abundance on the landscape, but showed a strong nonlinear relationship with farm and house density, indicating a critical point at which increased human habitat causes increased brood parasitism. Accurate predictions regarding landscape effects on nest predation and brood parasitism will require an increased appreciation of the multiple scales at which landscape components influence predator and parasite behavior. ?? 2006 by the Ecological Society of America.

Ecology↗

USGS2014

Reflections on a vision for integrated research and monitoring after 15 years

In May of 1998, Owen Bricker and his co-author Michael Ruggiero introduced a conceptual design for integrating the Nation’s environmental research and monitoring programs. The Framework for Integrated Monitoring and Related Research was an organizing strategy for relating data collected by various programs, at multiple spatial and temporal scales, and by multiple science disciplines to solve complex ecological issues that individual research or monitoring programs were not designed to address. The concept nested existing intensive monitoring and research stations within national and regional surveys, remotely sensed data, and inventories to produce a collaborative program for multi-scale, multi-network integrated environmental monitoring and research. Analyses of gaps in data needed for specific issues would drive decisions on network improvements or enhancements. Data contributions to the Framework from existing networks would help indicate critical research and monitoring programs to protect during budget reductions. Significant progress has been made since 1998 on refining the Framework strategy. Methods and models for projecting scientific information across spatial and temporal scales have been improved, and a few regional pilots of multi-scale data-integration concepts have been attempted. The links between science and decision-making are also slowly improving and being incorporated into science practice. Experiments with the Framework strategy since 1998 have revealed the foundational elements essential to its successful implementation, such as defining core measurements, establishing standards of data collection and management, integrating research and long-term monitoring, and describing baseline ecological conditions. They have also shown us the remaining challenges to establishing the Framework concept: protecting and enhancing critical long-term monitoring, filling gaps in measurement methods, improving science for decision support, and integrating the disparate integrated science efforts now underway. In the 15 years since the Bricker and Ruggiero (Ecol Appl 8(2):326–329, 1998) paper challenged us with a new paradigm for bringing sound and comprehensive science to environmental decisions, the scientific community can take pride in the progress that has been made, while also taking stock of the challenges ahead for completing the Framework vision.

Aquatic Geochemistry↗

USGS2009

Ecology of stream fish: Insights gained from an individual-based approach to juvenile Atlantic salmon

Using data from an ongoing study of juvenile Atlantic salmon growth and survival in tributaries of the Connecticut River, USA, we compare standard population-level approaches to those focusing on individuals. We highlight the potential benefits of resampling individually tagged stream fish as compared to standard approaches. Specifically we focus on growth, survival, movements and population estimation. The advantages of estimating sizes and growth rates from individual size trajectories include obtaining growth histories and the ability to perform retrospective analysis of the consequences of different life-history strategies. An example might be the patterns of growth leading to either early maturity or migration. Resampling known individuals is the only way we know to chart both short-term and long-term movements and to assign growth and mortality consequences to such movements. Finally, individual-level data permit robust estimation of survival and density/abundance using methods such as Cormack/Jolly-Seber. The results indicate that population estimates were about 10% lower using individual data than using population data, that survival from sample to sample was typically >90%, that the majority of recaptured fish did not move during the summer, that growth was rapid during spring and most fish lost mass during the summer and that growth trajectories for maturing and non-maturing fish showed substantially different patterns. An individual-based approach to stream fish ecology provides the opportunity to explore the mechanisms responsible for population-level patterns but comes at the cost of significant field effort. Tradeoffs between increased data resolution and the effort required to obtain the data must be considered before undertaking individual-based field studies of stream fishes.

Massachusetts↗

USGS2018

Social–ecological landscape patterns predict woody encroachment from native tree plantings in a temperate grassland

Afforestation is often viewed as the purposeful planting of trees in historically nonforested grasslands, but an unintended consequence is woody encroachment, which should be considered part of the afforestation process. In North America's temperate grassland biome, Eastern redcedar ( Juniperus virginiana L.) is a native species used in tree plantings that aggressively invades in the absence of controlling processes. Cedar is a well-studied woody encroacher, but little is known about the degree to which cedar windbreaks, which are advocated for in agroforestry programs, are contributing to woody encroachment, what factors are associated with cedar spread from windbreaks, nor where encroachment from windbreaks is occurring in contemporary social–ecological landscapes. We used remotely sensed imagery to identify the presence and pattern of woody encroachment from windbreaks in the Nebraska Sandhills. We used multimodel inference to compare three classes of models representing three hypotheses about factors that could influence cedar spread: (a) windbreak models based on windbreak structure and design elements; (b) abiotic models focused on local environmental conditions; and (c) landscape models characterizing coupled human-natural features within the broader matrix. Woody encroachment was evident for 23% of sampled windbreaks in the Nebraska Sandhills. Of our candidate models, our inclusive landscape model carried 92% of the model weight. This model indicated that encroachment from windbreaks was more likely near roadways and less likely near farmsteads, other cedar plantings, and waterbodies, highlighting strong social ties to the distribution of woody encroachment from tree plantings across contemporary landscapes. Our model findings indicate where additional investments into cedar control can be prioritized to prevent cedar spread from windbreaks. This approach can serve as a model in other temperate regions to identify where woody encroachment resulting from temperate agroforestry programs is emerging.

Nebraska↗

USGS2021

Diets and stable isotope signatures of native and nonnative Leucisid fishes advances our understanding of the Yellowstone Lake food web

(1) Many forage fishes, such as Leucisids (minnows) have depauperate studies on diet composition or stable isotope signatures, as these fishes are often only viewed as food for higher trophic levels. The need exists to understand and document the diet and stable isotope signatures of Leucisids (redside shiner, longnose dace, lake chub) in relation to the community ecology and food-web dynamics in Yellowstone Lake, especially given an invasive piscivore introduction and potential future effects of climate change on the Yellowstone Lake ecosystem. (2) Diet data collected during summer of 2020 were analyzed by species using proportion by number, frequency of occurrence, and mean proportion by weight, and diet overlap was compared using Schoener’s index (D). Stable isotope (δ 15 N and δ 13 C) values were estimated by collecting tissue during the summer of 2020 by species, and isotopic overlap was compared using 40% Bayesian ellipses. (3) Nonnative redside shiners and lake chub had similar diets, and native longnose dace diet differed from the nonnative Leucisids. Diet overlap was also higher between the nonnative Leucisids, and insignificant when comparing native and nonnative Leucisids. No evidence existed to suggest a difference in δ 15 N signatures among the species. Longnose dace had a mean δ 13 C signature of −15.65, indicating an decreased reliance on pelagic prey compared to nonnative Leucisids. Nonnative redside shiners and lake chub shared 95% of isotopic niche space, but stable isotope overlap was <25% for comparisons between native longnose dace and the nonnative Leucisids. (4) This study established the diet composition and stable isotope signatures of Leusicids residing in Yellowstone Lake, thus expanding our knowledge of Leucisid feeding patterns and ecology in relation to the native and nonnative species in the ecosystem. We also expand upon our knowledge of Leucisids in North America. Additionally, quantifying minnow diets can provide a baseline for understanding food web response to invasive suppression management actions.

Wyoming↗

USGS2023

Etiology of a fish kill, Including the endangered Tidewater Goby (Eucyclogobius newberryi), in a northeastern pacific coastal lagoon

Ecological disturbances such as fish kills can negatively impact ecosystem processes in coastal lagoons. To gain an understanding of factors causing fish kills, we examined conditions associated with a summertime fish kill in a northeastern Pacific coastal lagoon (Rodeo Lagoon, CA, USA). Examination of available data indicated the fish kill was likely caused by hypoxia involving the following etiology: (1) strong onshore winds (up to 12 m/s) mixed a stratified water column, (2) water column mixing transported nutrients from near the bed into the photic zone, (3) increased nutrient concentrations in the photic zone (> 200%) together with high solar irradiance fueled a phytoplankton bloom, (4) death and decomposition of phytoplankton (72% decrease in abundance) contributed to biological oxygen demand that led to (5) hypoxic conditions (as low as 0.6 mg/L) that caused the fish kill. The event resulted in the death of an estimated 3677 Tidewater Goby ( Eucyclogobius newberryi ), a species listed as endangered under the US Endangered Species Act, and numerous (but not enumerated) Threespine Stickleback ( Gasterosteus aculeatus ), unidentified sculpins (Cottidae), and macroinvertebrates (primarily Amphipoda). The processes contributing to the event are likely re-occurring phenomena responsible for observed periodic fish kills. Coastal lagoons with limited freshwater inflows and connection to the Pacific Ocean may retain nutrients and be susceptible to similar events.

California↗

USGS2015

Comment on "Donders, T.H. 2014. Middle Holocene humidity increase in Florida: climate or sea-level? Quaternary Science Reviews 103:170-174."

Donders (2014) has recently proposed that the climate of Florida became progressively wetter over the past 5000 years in response to a marked strengthening of the El Niño regime. This reconstruction is largely based on a re-analysis of pollen records from regions north of Lake Okeechobee ( Fig. 1 ) using a new set of pollen transfer functions. Donders concluded that a latitudinal gradient in precipitation prevailed across Florida since the mid Holocene, but the overall trend was toward progressively wetter conditions from 5000 cal BP to the present. Donders (2014) also proposed that this climatic trend extended across South Florida despite contrary paleo-records from the Everglades. In particular he singled out the Northeast Shark River Slough (NESRS) record of Glaser et al. (2013) as an atypical local signal of paleo-environmental change that was biased by a misinterpretation of the ecology of pine and Amaranthaceae (Amaranth family). In response to this direct critique of our paleo-environmental interpretation, we wish to point out that: Our interpretation of the NESRS sedimentary sequence (site 4, Fig. 1 A) was based on multiple lines of evidence that all indicate a shift from wetter to drier (i.e. less wet) conditions that occurred after 2800 cal BP. A similar climatic shift from wetter to less wet conditions was reported for this time interval from other sites in the Everglades ( Willard et al., 2006 and Willard and Bernhardt, 2011 ) and also from the Caribbean region to the east ( Hodell et al., 1991 , Hodell et al., 1995 and Higuera-Gundy et al., 1999 ). The NESRS site is located in an area where runoff collected from a 10,000 km 2 wetland prior to 1900 AD when most of the drainage from the Everglades was channeled to the sea through the narrow Shark River Slough. The sedimentary sequence at the NESRS site should therefore contain an integrated record of hydrological change across the pre-historical Everglades ( Glaser et al., 2012 ). In addition this essentially non-forested wetland is well suited to accumulate a representative sample of the regional pollen rain in its sediments (e.g. Jaccobson and Bradshaw, 1981 and Prentice, 1985 ).

Florida↗

USGS2021

Hydrology of annual winter water level drawdown regimes in recreational lakes of Massachusetts, United States

Annual winter water level drawdown (WD) is a common lake management strategy to maintain recreational value by controlling nuisance macrophytes and preventing ice damage to shoreline infrastructure in lakes of the northeastern United States. The state of Massachusetts provides general guidelines for lake managers to implement and practice WDs. However, WD management reporting is not required and as such empirical water level records are scarce, making it difficult to assess guideline adherence and link these management actions to littoral habitat conditions. We monitored water levels bihourly in 18 lakes with ongoing WD regimes and 3 non-drawdown lakes over 3–4 yr. Our results show an interlake drawdown magnitude gradient of 0.07–2.66 m with intralake consistency across years. Corresponding WD magnitudes generated exposure of 1.3–37.6% for entire lakebeds and 9.2–71.1% for littoral zones. WD durations averaged 171 d and ranged widely from 5 to 246 d. Longer recession and refill phase durations and faster recession rates were moderately to strongly correlated with drawdown magnitudes. WDs were predominantly initiated prior to the state of Massachusetts 1 November starting guideline (83.1%) and refilled to summer reference levels after the recommended date of 1 April (70.6%). To minimize ecological impacts while still meeting recreational goals, WD performance guidelines may require a more fine-scale approach that integrates local hydrogeomorphic features and the presence of WD-sensitive littoral biotic assemblages. However, climate change model projections of warmer and wetter winters in the Northeast indicate increasing uncertainty for WD as an effective and worthwhile macrophyte control tool.

Massachusetts↗

USGS2017

Biological relevance of streamflow metrics: Regional and national perspectives

Protecting the health of streams and rivers requires identifying ecologically significant attributes of the natural flow regime. Streamflow regimes are routinely quantified using a plethora of hydrologic metrics (HMs), most of which have unknown relevance to biological communities. At regional and national scales, we evaluated which of 509 commonly used HMs were associated with biological indicators of fish and invertebrate community integrity. We quantified alteration of each HM by using statistical models to predict site-specific natural baseline values for each of 728 sites across the USA where streamflow monitoring data were available concurrent with assessments of invertebrate or fish community integrity. We then ranked HMs according to their individual association with biological integrity based on random forest models that included HMs and other relevant covariates, such as land cover and stream chemistry. HMs were generally the most important predictors of biological integrity relative to the covariates. At a national scale, the most influential HMs were measures of depleted high flows, homogenization of flows, and erratic flows. Unique combinations of biologically relevant HMs were apparent among regions. We discuss the implications of our findings to the challenge of selecting HMs for streamflow research and management.

Freshwater Science↗