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USGS2008

Biological and societal dimensions of lead poisoning in birds in the USA

The ingestion of spent lead shot was known to cause mortality in wild waterfowl in the US a century before the implementation of nontoxic shot regulations began in 1972. The biological foundation for this transition was strongly supported by both field observations and structured scientific investigations. Despite the overwhelming evidence, various societal factors forestalled the full transition to nontoxic shot for waterfowl hunting until 1991. Now, nearly 20 years later, these same factors weigh heavily in current debates about nontoxic shot requirements for hunting other game birds, requiring nontoxic bullets for big game hunting in California Condor range and for restricting the use of small lead sinkers and jig heads for sport-fishing. As with waterfowl, a strong science-based foundation is requisite for further transitions to nontoxic ammunition and fishing weights. Our experiences have taught us that the societal aspects of this transition are as important as the biological components and must be adequately addressed before alternatives to toxic lead ammunition, fishing weights, and other materials will be accepted as an investment in wildlife conservation.

Book chapter↗

USGS2001

Some considerations on the use of ecological models to predict species' geographic distributions

Peterson (2001) used Genetic Algorithm for Rule-set Prediction (GARP) models to predict distribution patterns from Breeding Bird Survey (BBS) data. Evaluations of these models should consider inherent limitations of BBS data: (1) BBS methods may not sample species and habitats equally; (2) using BBS data for both model development and testing may overlook poor fit of some models; and (3) BBS data may not provide the desired spatial resolution or capture temporal changes in species distributions. The predictive value of GARP models requires additional study, especially comparisons with distribution patterns from independent data sets. When employed at appropriate temporal and geographic scales, GARP models show considerable promise for conservation biology applications but provide limited inferences concerning processes responsible for the observed patterns.

Condor↗

USGS2018

Energetic fitness: Field metabolic rates assessed via 3D accelerometry complement conventional fitness metrics

Evaluating the fitness of organisms is an essential step towards understanding their responses to environmental change. Connections between energy expenditure and fitness have been postulated for nearly a century. However, testing this premise among wild animals is constrained by difficulties in measuring energy expenditure while simultaneously monitoring conventional fitness metrics such as survival and reproductive output. We addressed this issue by exploring the functional links between field metabolic rate (FMR), body condition, sex, age and reproductive performance in a wild population. We deployed 3D accelerometers on 115 Adélie penguins Pygoscelis adeliae during four breeding seasons at one of the largest colonies of this species, Cape Crozier, on Ross Island, Antarctica. The demography of this population has been studied for the past 18 years. From accelerometry recordings, collected for birds of known age and breeding history, we determined the vector of the dynamic body acceleration (VeDBA) and used it as a proxy for FMR. This allowed us to demonstrate relationships among FMR, a breeding quality index (BQI) and body condition. Notably, we found a significant quadratic relationship between mean VeDBA during foraging and BQI for experienced breeders, and individuals in better body condition showed lower rates of energy expenditure. We conclude that using FMR as a fitness component complementary to more conventional fitness metrics will yield greater understanding of evolutionary and conservation physiology.

Functional Ecology↗

USGS2008

Anatomy of a bottleneck: diagnosing factors limiting population growth in the Puerto Rican parrot

The relative importance of genetic, demographic, environmental, and catastrophic processes that maintain population bottlenecks has received little consideration. We evaluate the role of these factors in maintaining the Puerto Rican Parrot (Amazona vittata) in a prolonged bottleneck from 1973 through 2000 despite intensive conservation efforts. We first conduct a risk analysis, then examine evidence for the importance of specific processes maintaining the bottleneck using the multiple competing hypotheses approach, and finally integrate these results through a sensitivity analysis of a demographic model using life-stage simulation analysis (LSA) to determine the relative importance of genetic, demographic, environmental, and catastrophic processes on population growth. Annual population growth has been slow and variable (1.0 6 5.2 parrots per year, or an average k?1.05 6 0.19) from 16 parrots (1973) to a high of 40-42 birds (1997-1998). A risk analysis based on population prediction intervals (PPI) indicates great risk and large uncertainty, with a range of 22?83 birds in the 90% PPI only five years into the future. Four primary factors (reduced hatching success due to inbreeding, failure of adults to nest, nest failure due to nongenetic causes, and reduced survival of adults and juveniles) were responsible for maintaining the bottleneck. Egghatchability rates were low (70.6% per egg and 76.8% per pair), and hatchability increased after mate changes, suggesting inbreeding effects. Only an average of 34% of the population nested annually, which was well below the percentage of adults that should have reached an age of first breeding (41-56%). This chronic failure to nest appears to have been caused primarily by environmental and/or behavioral factors, and not by nest-site scarcity or a skewed sex ratio. Nest failure rates from nongenetic causes (i.e., predation, parasitism, and wet cavities) were low (29%) due to active management (protecting nests and fostering captive young into wild nests), diminishing the importance of nest failure as a limiting factor. Annual survival has been periodically reduced by catastrophes (hurricanes), which have greatly constrained population growth, but survival rates were high under non-catastrophic conditions. Although the importance of factors maintaining the Puerto Rican Parrot bottleneck varied throughout the 30-year period of study, we determined their long-term influence using LSA simulations to correlate variation in demographic rates with variation in population growth (k). The bottleneck appears to have been maintained primarily by periodic catastrophes (hurricanes) that reduced adult survival, and secondarily by environmental and/or behavioral factors that resulted in a failure of many adults to nest. The influence of inbreeding through reduced hatching success played a much less significant role, even when additional effects of inbreeding on the production and mortality of young were incorporated into the LSA. Management actions needed to speed recovery include (1) continued nest guarding to minimize the effects of nest failure due to nongenetic causes; (2) creating a second population at another location on the island --a process that was recently initiated--to reduce the chance that hurricane strikes will cause extinction; and (3) determining the causes of the low percentage of breeders in the population and ameliorating them, which would have a large impact on population growth.

Ecological Monographs↗

USGS2013

Identification of metrics to monitor salt marsh integrity on National Wildlife Refuges in relation to conservation and management objectives

Executive Summary Most salt marshes in the US have been degraded by human activities, and threats from physical alterations, surrounding land-use, species invasions, and global climate change persist. Salt marshes are unique and highly productive ecosystems with high intrinsic value to wildlife, and many National Wildlife Refuges (NWRs) have been established in coastal areas to protect large tracts of salt marsh and wetland-dependent species. Various management practices are employed routinely on coastal NWRs to restore and enhance marsh integrity and ensure ecosystem sustainability. Prioritizing NWR salt marshes for application of management actions and choosing among multiple management options requires scientifically-based methods for assessing marsh condition. Monitoring is integral to structured decision-making (SDM), a formal process for decomposing a decision into its essential elements. Within a natural resource context, SDM involves identifying management objectives, alternative management actions, and expected management outcomes. The core of SDM is a set of criteria for measuring system performance and evaluating management responses. Therefore, use of SDM to frame natural resource decisions leads to logical selection of monitoring attributes that are linked explicitly to management needs. We used SDM to guide selection of variables for monitoring the ecological integrity of salt marshes within the National Wildlife Refuge System (NWRS). Our objectives were to identify indicators of salt marsh integrity that are effective across large geographic regions, responsive to a wide range of threats, and feasible to implement within funding and staffing constraints of the NWRS. In April, 2008, we engaged interdisciplinary experts in a week-long rapid prototyping SDM workshop to define the essential elements of salt marsh management decisions on refuges throughout the northeastern, southwestern, and northwestern US, corresponding to respective Regions 5, 2, and 1 of the US Fish and Wildlife Service (FWS). Through this process we identified measurable attributes for monitoring salt marsh ecosystems that are integrated into conservation practice and target management objectives. The following salt marsh attributes were identified through the SDM process either for describing state condition to determine management needs or for evaluating the achievement of management objectives: historical condition and geomorphic setting; ditch density; surrounding land use; ratio of open water area to vegetation area; rate of pesticide application; environmental contaminant concentration; change in marsh surface elevation relative to sea level rise; tidal range and groundwater level; surface topography; salinity; and species composition and abundance of vegetation, invasive species, invertebrates, nekton, and breeding and wintering birds. The identified attributes were too broadly defined to serve as operational monitoring variables. Therefore, we tested specific metrics for quantifying most of these attributes in summers of 2008 and 2009. The first four attributes in the above list can be characterized by office-based analysis of existing GIS data layers. The remaining attributes require field-based methods for assessment. We were forced to exclude a small number of attributes from field tests due to inconsistent data (pesticide application rate, environmental contaminant concentrations) or requirements that exceeded the scope of this project (change in marsh surface elevation; surface topography; benthic invertebrates; wintering birds). We evaluated potential metrics for evaluating all remaining field attributes. In partnership with NWRS biologists, we tested rapid versus intensive metrics for monitoring field attributes (tidal range and groundwater level; marsh surface elevation; salinity; and species composition and abundance of vegetation, invasive species, nekton, and breeding birds) at coastal refuges throughout FWS Region 5. Seven refuges participated in metric testing in 2008: Rachel Carson (ME), Parker River (MA), Wertheim (NY), E. B. Forsythe (NJ), Bombay Hook (DE), Prime Hook (DE), and Eastern Shore of Virginia Complex (VA). These seven and two additional refuges participated in metric testing in 2009: Rhode Island Complex (RI) and Stewart B. McKinney (CT). We based all field metrics on existing protocols for salt marsh assessment. Sampling locations were determined randomly within delineated marsh study units (MSUs) at each refuge. Detailed field methods are provided in appendices to this report. Measurements for individual metrics were averaged across samples within MSUs during each year of sampling. Each year, correlation or regression analysis was conducted on average measurements across MSUs within each attribute set to identify redundant metrics. Statistical redundancy between a pair of metrics within an attribute set (i.e., correlation or regression slopes with p-values < 0.05) was considered justification for eliminating one of the pair from the regional set of monitoring metrics. Decisions regarding metric elimination versus retention were based on feasibility of monitoring, considering such factors as sampling time, resources required, and potential for regional standardization in implementation. The result of these tests is a reduced suite of monitoring metrics that targets NWRS management decisions and is practicable for implementing on a regional scale. Based on these tests, we recommend the following list of metrics for monitoring integrity of NWRS salt marshes (marsh attribute category is in parentheses): (historical condition and geomorphic setting) position of marsh in the landscape, marsh shape, degree of fill and/or fragmentation, degree of tidal flushing, amount of aquatic edge; (ditch density) ranking of ditch density from none to severe; (surrounding land use) relative proportion of agricultural land in a 150-m buffer around the marsh, relative proportion of natural land in a 150-m buffer around the marsh, relative proportion of natural land in a 1-km buffer around the marsh; (ratio of open water area to vegetation area) ratio of open water to emergent herbaceous wetlands within the marsh; (marsh surface elevation) elevation referenced to NAVD88 in a representative area of the marsh; (tidal range and groundwater level) percent of time the marsh surface is flooded during deployment of a continuous water-level monitor at a representative marsh location, mean depth of surface flooding as measured by a continuous water-level monitor at a representative location; (salinity) salinity measured in surface water; (vegetation community) vegetation species richness using the point-intercept method in 100-m diameter survey plots, percent cover of various marsh community types within 100-m diameter survey plots; (invasive species abundance) percent cover of invasive plant species measured using the point-intercept method in 100-m diameter survey plots; (nekton community) nekton density, nekton species richness, length of Fundulus heteroclitus ; (breeding bird community) abundance of Willets counted per point during standard call-broadcast surveys, summed abundance of tidal marsh obligate species (Clapper Rail, Willet, Saltmarsh Sparrow, Seaside Sparrow) counted per point during standard call-broadcast surveys. Metrics describing the historical condition, geomorphic setting, and broad landscape features can be assessed using existing GIS databases. Our results support use of rapid methods to assess the majority of field metrics; only those used to describe the nekton community must be measured using intensive methods (throw traps or ditch nets, dependant on habitat configuration). Implementation of these metrics for quantitative assessment of NWRS salt marsh integrity in FWS Region 5 requires developing sampling designs for each refuge. Additionally, it is important to determine how the monitoring information will be used within a management context. SDM should be used to complete the analysis of salt marsh management decisions. The next steps would involve 1) prioritizing and weighting the management objectives; 2) predicting responses to individual management actions in terms of objectives and metrics; 3) using multiattribute utility theory to convert all measurable attributes to a common utility scale; 4) determining the total management benefit of each action by summing utilities across objectives; and 5) maximizing the total management benefits within cost constraints for each refuge. This process would allow the optimum management decisions for NWRS salt marshes to be selected and implemented based directly on monitoring data and current understanding of marsh responses to management actions. Monitoring the outcome of management actions would then allow new monitoring data to be incorporated into subsequent decisions.

Connecticut, Delaware, Maine, Massachusetts, New J↗

USGS2023

Structure of breeding calls in three closely related bird species (Calidris Merrem, 1804; Scolopacidae)

We studied calls of three sandpiper species to document species’ similarities and differences. We hypothesized that functionally different calls would differ in degree of divergence. We studied two nuptial calls (complex “Song” and rhythmically repeated aerial call, RRC) of males, and a general-purpose call (“alarm” trill, AT) given by parents of both sexes in the presence of humans and other potential predators, in great knot, Calidris tenuirostris (Horsfeld, 1821); surfbird, Calidris virgata (Gmelin, 1789); and red knot, Calidris canutus (Linnaeus, 1758). Calls diverged unevenly across species—RRCs and Song diverged the most and ATs the least. Vocalizations of great knot and surfbird were most similar to one another, in agreement with a recently proposed phylogeny. Despite species differences in single acoustic traits, calls were evolutionarily conservative at higher structural levels, such as rhythmic temporal delivery of RRCs and harmonic structure (e.g., the fundamental frequency was suppressed in some call types). Some acoustic qualities that differed across species were similar across call types within species (e.g., tonality in red knot calls). Trait similarity across different calls suggests that a species’ calls cannot evolve independently of one another: common mechanisms of vocal production across different calls may impede differentiation within a species’ repertoire.

Canadian Journal of Zoology↗

USGS1981

Waterfowl and their wintering grounds in Mexico, 1937-64

The U.S. Fish and Wildlife Service has been interested in migratory birds, especially waterfowl, in Mexico for many years, An early period of cooperation in waterfowl administration was culminated in 1937 with the final ratification of the Convention Between the United States and the United Mexican States for the Protection of Migratory Birds and Game Mammals, usually referred to as the Migratory Bird Treat. Management of waterfowl on this continent is primarily carried out by hunting regulations. Current information on the status of each species must be obtained each year to serve as a basis for any needed modifications in the regulations. In the United States and Canada, wildlife biologists of the U.S. Fish and Wildlife Service and the Canadian Wildlife Service annually make the surveys to obtain this basic information. But the Government of Mexico has made no comparable surveys. Mexicans are not interested in hunting waterfowl to the extent that citizens of the United States and Canada are. As a consequence, Mexico's Department of Game emphasizes activities other than waterfowl management. Waterfowl, especially ducks, winter in or migrate through Mexico in large numbers, so it is obvious that and continental surveys of the winter population should include Mexico. Some general investigations of waterfowl distribution there were made in 1926 and earlier by E. A. Goldman. He was familiar with much of Mexico because he and E. W. Nelson studied mammals and biota there for many years. In the 1930's, because of the greater emphasis on waterfowl conservation and management, more detailed surveys were made of the continental breeding and wintering populations. One of these activities was designated as the midwinter, or January, inventory. In the early 1940's the senior author, who had been the Central Flyaway Biologist since 1937, recommended that the waterfowl wintering grounds in Mexico be included in the coverage of the midwinter waterfowl inventory. This was arranged in 1947, and the first aerial coverage, which only included coastal localities, was made in January-February of that year. The information obtained confirmed the value and advisability of including the Mexican wintering grounds in the annual survey; beginning in 1951 the wintering grounds in the Mexican highlands also were included. The surveys of Mexico were continued, except in 1957, through 1965; after 1965 they were greatly reduced. Ground reconnaissance and surveys had begun in Mexico with the preliminary work of Goldman in 1926, but quantitative studies were not started until 1937. The ground surveys continued at intervals in various parts of the Republic until 1960. Ground surveys are invaluable for such purposes as securing ecological information, specimens of birds and plants, and historical data about the areas from local residents, but the only satisfactory method of obtaining accurate quantitative information on waterfowl populations and their distribution is by airplane. Consequently, the major emphasis since 1947 has been on the annual aerial surveys. Ground studies were made much less frequently and were carried out mainly to obtain correlative information on the waterfowl foods available, the ecology of habitats, and for liaison with wildlife officials and biologists in Mexico. An important reason for the surveys of the waterfowl wintering grounds in Mexico was to determine their adequacy for the population of birds using them, and their potential to accommodate additional waterfowl if the wintering grounds in the United States became inadequate and larger flights entered Mexico. Other advantages included providing accurate information to hunters and other interested persons in the United States regarding the waterfowl shooting in Mexico, and determining the current status of these birds and their habitats in that country. Some of these findings were previously summarized by us (Saunders and Saunders 1949; Saunders 1964).

Resource Publication↗

USGS2012

A matter of tradeoffs: reintroduction as a multiple objective decision

Decision making in guidance of reintroduction efforts is made challenging by the substantial scientific uncertainty typically involved. However, a less recognized challenge is that the management objectives are often numerous and complex. Decision makers managing reintroduction efforts are often concerned with more than just how to maximize the probability of reintroduction success from a population perspective. Decision makers are also weighing other concerns such as budget limitations, public support and/or opposition, impacts on the ecosystem, and the need to consider not just a single reintroduction effort, but conservation of the entire species. Multiple objective decision analysis is a powerful tool for formal analysis of such complex decisions. We demonstrate the use of multiple objective decision analysis in the case of the Florida non-migratory whooping crane reintroduction effort. In this case, the State of Florida was considering whether to resume releases of captive-reared crane chicks into the non-migratory whooping crane population in that state. Management objectives under consideration included maximizing the probability of successful population establishment, minimizing costs, maximizing public relations benefits, maximizing the number of birds available for alternative reintroduction efforts, and maximizing learning about the demographic patterns of reintroduced whooping cranes. The State of Florida engaged in a collaborative process with their management partners, first, to evaluate and characterize important uncertainties about system behavior, and next, to formally evaluate the tradeoffs between objectives using the Simple Multi-Attribute Rating Technique (SMART). The recommendation resulting from this process, to continue releases of cranes at a moderate intensity, was adopted by the State of Florida in late 2008. Although continued releases did not receive support from the International Whooping Crane Recovery Team, this approach does provide a template for the formal, transparent consideration of multiple, potentially competing, objectives in reintroduction decision making.

Journal of Wildlife Management↗

USGS2019

Factors promoting the recolonization of Oahu, Hawaii, by Bristle-thighed Curlews

Suitable habitat for Arctic-breeding migratory shorebirds is decreasing at their traditional wintering islands and atolls in the Central Pacific Flyway (i.e., Oceania) due to habitat degradation, reclamation, and sea-level rise. To maintain the size and resiliency of their populations, migratory shorebirds will need to expand their winter ranges by either colonizing new sites or recolonizing old sites from which they were extirpated. Bristle-thighed Curlews (Numenius tahitiensis) are long-distance migratory shorebirds that breed only in Alaska and winter across a vast region of the Central Pacific, typically on remote, unpopulated islands and atolls. Historically, Bristle-thighed Curlews were considered uncommon transients on the main Hawaiian Islands, but in the mid-1990s, curlews became regular visitors to Oahu and subsequently began wintering at the James Campbell National Wildlife Refuge on Oahu Island in Hawaii. Curlew numbers at this site grew steadily from <5 birds in the mid-1990s to an estimated 126 winter residents (95%CI 108–147) in 2013–2014. Timing of the recolonization event coincided with the establishment of a fenced pond complex that was managed for endangered waterbirds by maintaining areas of shallow water and low vegetation. High rates of apparent annual survival exhibited by adults and subadults (0.86–0.95) confirmed the suitability of the Refuge to curlews. Our results suggest that curlews in Oceania can naturally recolonize wintering islands, a trait that may be key to the survival of this species of conservation concern in an era of rising sea levels.

Hawaii↗

USGS2006

2005 annual progress report: Elk and bison grazing ecology in the Great Sand Dunes complex of lands

In 2000 the U.S. Congress authorized the expansion of the former Great Sand Dunes National Monument by establishing a new Great Sand Dunes National Park and Preserve in its place, and establishing the Baca National Wildlife Refuge. The establishment of Great Sand Dunes National Park and Preserve and the new Baca National Wildlife Refuge in the San Luis Valley (SLV), Colorado was one of the most significant land conservation actions in the western U.S. in recent years. The action was a result of cooperation between the National Park Service (NPS), U.S. Fish and Wildlife Service (USFWS), Bureau of Land Management (BLM), U.S. Forest Service (USDA-FS), and The Nature Conservancy (TNC). The new national park, when fully implemented, will consist of 107,265 acres, the new national preserve 41,872 acres, and the new national wildlife refuge (USFWS lands) 92,180 acres (fig. 1). The area encompassed by this designation protects a number of natural wonders and features including a unique ecosystem of natural sand dunes, the entire watershed of surface and groundwaters that are necessary to preserve and recharge the dunes and adjacent wetlands, a unique stunted forest, and other valuable riparian vegetation communities that support a host of associated wildlife and bird species. When the National Park was initially established, there were concerns about overconcentrations and impacts on native plant communities of the unhunted segments of a large and possibly growing elk (Cervus elaphus) population. This led to the designation of the Preserve as a compromise solution, where the elk could be harvested. The Preserve Unit, however, will not address all the ungulate management challenges. In order to reduce the current elk population, harvests of elk may need to be aggressive. But aggressive special hunts of elk to achieve population reductions can result in elk avoidance of certain areas or elk seeking refuge in areas where they cannot be hunted, while removals of whole herd segments and abandonment or alterations of migration routes can occur (Smith and Robbins, 1994; Boyce and others, 1991). Elk may seek refuge from hunting in the newly expanded Park Unit and TNC lands where they might overconcentrate and impact unique vegetation communities. In these sites of refugia, or preferred loafing sites, elk and bison could accelerate a decline in woody riparian shrubs and trees. This decline may also be due to changes in hydrology, climatic, or dunal processes, but ungulate herbivory might exacerbate the effects of those processes. To address the questions and needs of local resource managers, a multi-agency research project was initiated in 2005 to study the ecology, forage relations, and habitat relations of elk and bison in the Great Sand Dunes–Sangre de Cristo–Baca complex of lands. Meetings and discussions of what this research should include were started in 2001 with representatives from NPS, USFWS, TNC, the Colorado Division of Wildlife (CDOW), and USDA-FS/BLM. The final study plan was successfully funded in 2004 with research scheduled to start in 2005. The research was designed to encompass three major study elements: (1) animal movements and population dynamics, (2) vegetation and nutrient effects from ungulate herbivory, and (3) development of ecological models, using empirical data collected from the first two components, that will include estimates of elk carrying capacity and management scenarios for resource managers.

Colorado↗

USGS2011

Chapter 4: A sampling and analytical approach to develop spatial distribution models for sagebrush-associated species

Understanding multi-scale floral and faunal responses to human land use is crucial for informing natural resource management and conservation planning. However, our knowledge on how land use influences sagebrush (Artemisia spp.) ecosystems is limited primarily to site-specific studies. To fill this void, studies across large regions are needed that address how species are distributed relative to type, extent, and intensity of land use. We present a study design for the Wyoming Basin Ecoregional Assessment (WBEA) to sample sagebrush-associated flora and fauna along a land cover-human land use gradient. To minimize field costs, we sampled various taxonomic groups simultaneously on transects (ungulates and lagomorphs), point counts (song birds), and area-searches of 7.29-ha survey blocks (pellet counts, burrow counts, reptile surveys, medium-sized mammals, ant mounds, rodent trapping, and vegetation sampling of native and exotic plants). We then present an exploratory approach to develop species occurrence and abundance models when a priori model building is not an option. Our study design has broad applications for large-scale evaluations of arid ecosystems.

Wyoming↗

USGS2002

Managing agricultural wetlands for waterbirds in the coastal regions of Louisiana, U.S.A.

Rice and/or crawfish are cultivated in over 225,000 ha of shallow earthen impoundments within 160 km of the Gulf of Mexico along the coast of Louisiana. The region includes both the Gulf Coastal Plain and Prairie and the Lower Mississippi River Valley. Annual loss of 4,475 ha of coastal wetlands in Louisiana due to subsidence, erosion, and rising sea level has significantly reduced desirable freshwater habitat in the region. The suite of resident, migrant, breeding, and wintering waterbirds depending on this region includes grebes, pelicans, cormorants, anhingas, wading birds, waterfowl, coots, rails, gallinules, shorebirds, gulls, terns, and kingfishers. These taxa utilize the artificial freshwater wetland habitat provided by the agricultural wetlands. Numerous other birds utilize riparian areas associated with these artificial wetlands. Crawfish ponds are especially valuable cool season habitat for predaceous waterbirds because they provide shallow water systems rich in invertebrate and small vertebrate prey during the period from mid-autumn through mid-spring when most rice fields are drained. Because most crawfish ponds are not drained until late spring or early summer, predictable, food-rich, shallow water waterbird habitat is available throughout the region when rice fields are being cultivated for rice production. Incorporation of crawfish management into government-sponsored land conservation programs should encourage land owners to sustain standing water habitat outside of program mandated fill/drain requirements. Farmers could adjust the times when their impoundments are filled or drained to maximize benefits to many species, especially migrating shorebirds.

Louisiana↗

USGS2024

Correcting for measurement errors in a long-term aerial survey with auxiliary photographic data

Long-term, large-scale monitoring of wildlife populations is an integral part of conservation research and management. However, some traditional monitoring protocols lack the information needed to account for sources of measurement error in data analyses. Ignoring measurement error, such as partial availability, imperfect detection, and species misidentification, can lead to mischaracterizations of population states and processes. Accounting for measurement error is key to robust monitoring of populations, which can inform a wide variety of decisions, including harvest, habitat restoration, and determination of the legal status of species. We undertook an effort to retroactively minimize bias in a large-scale, long-term monitoring program for marine birds in the Salish Sea, Washington, USA, by conducting an auxiliary study to jointly estimate components of measurement error. We built a novel model in a Bayesian framework that simultaneously harnessed human observer and photographic data types to produce estimates necessary to correct for the effects of partial availability, imperfect detection, and species misidentification. Across all 31 species identified in photographs, both observers had instances of undercounting and overcounting birds but tended to undercount (observers undercounted totals across all species on 69.3%–78.9% of transects). We estimated species-specific correction factors that can be used to correct both historical and future counts from the Salish Sea survey, which has been running since 1992. Our novel modeling framework can be applied in other multispecies monitoring contexts where minimal photographic data can be collected for the purposes of correcting for measurement error in large-scale, long-term datasets.

Washington↗

USGS2020

Migratory status determines resource selection by American Woodcock at an important fall stopover, Cape May, New Jersey

Migration is a period of high activity and exposure during which risks and energetic demand on individuals may be greater than during nonmigratory periods. Stopover locations can help mitigate these threats by providing supplemental energy en route to the animal’s end destination. Effective conservation of migratory species therefore requires an understanding of use of space that provides resources to migratory animals at stopover sites. We conducted a radio-telemetry study of a short-distance migrant, the American Woodcock ( Scolopax minor ), at an important stopover site, the Cape May Peninsula, New Jersey. Our objectives were to describe land-cover types used by American Woodcock and evaluate home range habitat selection for individuals that stopover during fall migration and those that choose to overwinter. We radio-marked 271 individuals and collected 1,949 locations from these birds (0–21 points individual –1 ) over 4 yr (2010 to 2013) to inform resource selection functions of land-cover types and other landscape characteristics by this species. We evaluated these relationships at multiple spatial extents for (1) birds known to have ultimately left the peninsula (presumed migrants), and (2) birds known to have remained on the peninsula into the winter (presumed winter residents). We found that migrants selected deciduous wetland forest, agriculture, mixed shrub, coniferous wetland forest, and coniferous shrub, while wintering residents selected deciduous wetland forest, coniferous shrub, and deciduous shrub. We used these results to develop predictive models of potential habitat: 7.80% of the peninsula was predicted to be potential stopover habitat for American Woodcock (95% classification accuracy) and 4.96% of the peninsula was predicted to be potential wintering habitat (85% classification accuracy). Our study is the first to report habitat relationships for migratory American Woodcock in the coastal U.S. and provides important spatial tools for local and regional managers to support migratory and winter resident woodcock populations into the future.

New Jersey↗

USGS2016

Nuclear and mitochondrial DNA analyses of golden eagles (Aquila chrysaetos canadensis) from three areas in western North America; initial results and conservation implications

Understanding the genetics of a population is a critical component of developing conservation strategies. We used archived tissue samples from golden eagles ( Aquila chrysaetos canadensis ) in three geographic regions of western North America to conduct a preliminary study of the genetics of the North American subspecies, and to provide data for United States Fish and Wildlife Service (USFWS) decision-making for golden eagle management. We used a combination of mitochondrial DNA (mtDNA) D-loop sequences and 16 nuclear DNA (nDNA) microsatellite loci to investigate the extent of gene flow among our sampling areas in Idaho, California and Alaska and to determine if we could distinguish birds from the different geographic regions based on their genetic profiles. Our results indicate high genetic diversity, low genetic structure and high connectivity. Nuclear DNA Fst values between Idaho and California were low but significantly different from zero (0.026). Bayesian clustering methods indicated a single population, and we were unable to distinguish summer breeding residents from different regions. Results of the mtDNA AMOVA showed that most of the haplotype variation (97%) was within the geographic populations while 3% variation was partitioned among them. One haplotype was common to all three areas. One region-specific haplotype was detected in California and one in Idaho, but additional sampling is required to determine if these haplotypes are unique to those geographic areas or a sampling artifact. We discuss potential sources of the high gene flow for this species including natal and breeding dispersal, floaters, and changes in migratory behavior as a result of environmental factors such as climate change and habitat alteration. Our preliminary findings can help inform the USFWS in development of golden eagle management strategies and provide a basis for additional research into the complex dynamics of the North American subspecies.

Alaska, California, Idaho, Oregon↗

USGS2012

Potential effects of climate change on the distribution of waterbirds in the Prairie Pothole Region, U.S.A.

Wetland-dependent birds are considered to be at particularly high risk for negative climate change effects. Current and future distributions of American Bittern ( Botaurus lentiginosus ), American Coot ( Fulica americana ), Black Tern ( Chlidonias niger ), Pied-billed Grebe ( Podilymbus podiceps ) and Sora ( Porzana carolina ), five waterbird species common in the Prairie Pothole Region (PPR), were predicted using species distribution models (SDMs) in combination with climate data that projected a drier future for the PPR. Regional-scale SDMs were created for the U.S. PPR using breeding bird survey occurrence records for 1971-2000 and wetland and climate parameters. For each waterbird species, current distribution and four potential future distributions were predicted: all combinations of two Global Circulation Models and two emissions scenarios. Averaged for all five species, the ensemble range reduction was 64%. However, projected range losses for individual species varied widely with Sora and Black Tern projected to lose close to 100% and American Bittern 29% of their current range. Future distributions were also projected to a hypothetical landscape where wetlands were numerous and constant to highlight areas suitable as conservation reserves under a drier future climate. The ensemble model indicated that northeastern North Dakota and northern Minnesota would be the best areas for conservation reserves within the U.S. PPR under the modeled conditions.

North Dakota;South Dakota;Minnesota;Iowa↗

USGS2012

Flow-adjusted trends in dissolved selenium load and concentration in the Gunnison and Colorado Rivers near Grand Junction, Colorado, water years 1986--2008

As a result of elevated selenium concentrations, many western Colorado rivers and streams are on the U.S. Environmental Protection Agency 2010 Colorado 303(d) list, including the main stem of the Colorado River from the Gunnison River confluence to the Utah border. Selenium is a trace metal that bioaccumulates in aquatic food chains and can cause reproductive failure, deformities, and other adverse impacts in birds and fish, including several threatened and endangered fish species. Salinity in the upper Colorado River has been the focus of source-control efforts for many years. Although salinity loads and concentrations have been previously characterized at the U.S. Geological Survey (USGS) streamflow-gaging stations at the Gunnison River near Grand Junction, Colo., and at the Colorado River near the Colorado-Utah State line, trends in selenium load and concentration at these two stations have not been studied. The USGS, in cooperation with the Bureau of Reclamation and the Colorado River Water Conservation District, evaluated dissolved selenium (herein referred to as "selenium") load and concentration trends at these two sites to inform decision makers on the status and trends of selenium. This report presents results of the evaluation of trends in selenium load and concentration for two USGS streamflow-gaging stations: the Gunnison River near Grand Junction, Colo. ("Gunnison River site"), USGS site 09152500, and the Colorado River near Colorado-Utah State line ("Colorado River site"), USGS site 09163500. Flow-adjusted selenium loads were estimated for the beginning water year (WY) of the study, 1986, and the ending WY of the study, 2008. The difference between flow-adjusted selenium loads for WY 1986 and WY 2008 was selected as the method of analysis because flow adjustment removes the natural variations in load caused by changes in mean-daily streamflow, emphasizing human-caused changes in selenium load and concentration. Overall changes in human-caused effects in selenium loads and concentrations during the period of study are of primary interest to the cooperators. Selenium loads for each of the 2 water years were calculated by using normalized mean-daily streamflow, measured selenium concentration, standard linear regression techniques, and data previously collected at the two study sites. Mean-daily streamflow was normalized for each site by averaging the daily streamflow for each day of the year over the 23-year period of record. Thus, for the beginning and ending water years, estimations could be made of loads that would have occurred without the effect of year-to-year streamflow variation. The loads thus calculated are illustrative of the change in loads between water years 1986 and 2008, and are not the actual loads that occurred in those 2 water years. The estimated 50th and 85th percentile selenium concentrations associated with the selenium loads were also calculated for WY 1986 and WY 2008 at each site. Time-trends in selenium concentration at the two sites were charted by using regression techniques for partial residuals for the entire study period (WY 1986 through WY 2008). Annual selenium load for the Gunnison River site was estimated to be 23,196 pounds for WY 1986 and 16,560 pounds for WY 2008, a 28.6 percent decrease. Lower and upper 95-percent confidence levels for WY 1986 annual load were 22,360 and 24,032 pounds. Lower and upper 95-percent confidence levels for WY 2008 annual load were 15,724 and 17,396 pounds. Estimated 50th percentile daily selenium concentrations decreased from 6.41 to 4.57 micrograms/liter from WY 1986 to WY 2008, whereas estimated 85th percentile daily selenium concentrations decreased from 7.21 to 5.13 micrograms/liter from WY 1986 to WY 2008. Annual selenium load for the Colorado River site was estimated to be 56,587 pounds for WY 1986 and 34,344 pounds for WY 2008, a 39.3 percent decrease. Lower and upper 95-percent confidence levels for WY 1986 annual load were 53,785 and 59,390 pounds. Lower and upper 95-percent confidence levels for WY 2008 annual load were 31,542 and 37,147 pounds. Estimated 50th percentile daily selenium concentrations decreased from 6.44 to 3.86 micrograms/liter from WY 1986 to WY 2008, whereas estimated 85th percentile daily selenium concentrations decreased from 7.94 to 4.72 micrograms/liter from WY 1986 to WY 2008.

Colorado↗

USGS2008

Releases of whooping cranes to the Florida nonmigratory flock: a structured decision-making approach: report to the International Whooping Crane Recovery Team, September 22, 2008

We used a structured decision-making approach to inform the decision of whether the Florida Fish and Wildlife Conservation Commission should request of the International Whooping Crane Recovery Team that additional whooping crane chicks be released into the Florida Non-Migratory Population (FNMP). Structured decision-making is an application of decision science that strives to produce transparent, replicable, and defensible decisions that recognize the appropriate roles of management policy and science in decision-making. We present a multi-objective decision framework, where management objectives include successful establishment of a whooping crane population in Florida, minimization of costs, positive public relations, information gain, and providing a supply of captive-reared birds to alternative crane release projects, such as the Eastern Migratory Population. We developed models to predict the outcome relative to each of these objectives under 29 different scenarios of the release methodology used from 1993 to 2004, including options of no further releases and variable numbers of releases per year over the next 5-30 years. In particular, we developed a detailed set of population projection models, which make substantially different predictions about the probability of successful establishment of the FNMP. We used expert elicitation to develop prior model weights (measures of confidence in population model predictions); the results of the population model weighting and modelaveraging exercise indicated that the probability of successful establishment of the FNMP ranged from 9% if no additional releases are made, to as high as 41% with additional releases. We also used expert elicitation to develop weights (relative values) on the set of identified objectives, and we then used a formal optimization technique for identifying the optimal decision, which considers the tradeoffs between objectives. The optimal decision was identified as release of 3 cohorts (24 birds) per year over the next 10 years. However, any decision that involved release of 1-3 cohorts (8-24 birds) per year over the next 5 to 20 years, as well as decisions that involve skipping releases in every other year, performed better in our analysis than the alternative of no further releases. These results were driven by the relatively high objective weights that experts placed on the population objective (i.e., successful establishment of the FNMP) and the information gain objective (where releases are expected to accelerate learning on what was identified as a primary uncertainty: the demographic performance of wild-hatched birds). Additional considerations that were not formally integrated into the analysis are also discussed.

Florida↗