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Sources of phosphorus to the Carson River upstream from Lahontan Reservoir, Nevada and California, Water Years 2001-02

Discharge of treated municipal-sewage effluent to the Carson River in western Nevada and eastern California ceased by 1987 and resulted in a substantial decrease in phosphorus concentrations in the Carson River. Nonetheless, concentrations of total phosphorus and suspended sediment still commonly exceed beneficial-use criteria established for the Carson River by the Nevada Division of Environmental Protection. Potential sources of phosphorus in the study area include natural inputs from undisturbed soils, erosion of soils and streambanks, construction of low-head dams and their destruction during floods, manure production and grazing by cattle along streambanks, drainage from fields irrigated with streamwater and treated municipal-sewage effluent, ground-water seepage, and urban runoff including inputs from golf courses. In 2000, the U.S. Geological Survey (USGS), in cooperation with Carson Water Subconservancy District, began an investigation with the overall purpose of providing managers and regulators with information necessary to develop and implement total maximum daily loads for the Carson River. Two specific goals of the investigation were (1) to identify those reaches of the Carson River upstream from Lahontan Reservoir where the greatest increases in phosphorus and suspended-sediment concentrations and loading occur, and (2) to identify the most important sources of phosphorus within the reaches of the Carson River where the greatest increases in concentration and loading occur. Total-phosphorus concentrations in surface-water samples collected by USGS in the study area during water years 2001-02 ranged from <0.01 to 1.78 mg/L and dissolved-orthophosphate concentrations ranged from <0.01 to 1.81 mg/L as phosphorus. In streamflow entering Carson Valley from headwater areas in the East Fork Carson River, the majority of samples exceeding the total phosphorus water-quality standard of 0.1 mg/L occur during spring runoff (March, April, and May) when suspended-sediment concentrations are high. Downstream from Carson Valley, almost all samples exceed the water-quality standard, with the greatest concentrations observed during spring and summer months. Estimated annual total-phosphorus loads ranged from 1.33 tons at the West Fork Carson River at Woodfords to 43.41 tons at the Carson River near Carson City during water years 2001-02. Loads are greatest during spring runoff, followed by fall and winter, and least during the summer, which corresponds to the amount of streamflow in the Carson River. The estimated average annual phosphorus load entering Carson Valley was 21.9 tons; whereas, the estimated average annual phosphorus load leaving Carson Valley was 37.8 tons, for an annual gain in load across Carson Valley of 15.9 tons. Thus, about 58 percent of the total-phosphorus load leaving Carson Valley on an annual basis could be attributed to headwater reaches upstream from Carson Valley. During spring and summer (April 1-September 30) an average of 85 percent of the total-phosphorus load leaving Carson Valley could be attributed to headwater reaches. During fall and winter (October 1-March 31) only 17 percent of the phosphorus load leaving Carson Valley could be attributed to headwater reaches. The composition of the phosphorus changes during summer from particulate phosphorus entering Carson Valley to dissolved orthophosphate leaving Carson Valley. Particulate phosphorus entering Carson Valley could be settling out when water is applied to fields and be replaced by dissolved orthophosphate from other sources. Alternatively, the particulate phosphorus could be converted to dissolved orthophosphate as it travels across Carson Valley. Data collected during the study are not sufficient to distinguish between the two possibilities. Eagle Valley and Dayton-Churchill Valleys may act as sinks for phosphorus. On an annual basis, during water years 2001-02, about 90 percent of the phosphorus entering Eagle Valley left the

Scientific Investigations Report↗

Status and understanding of groundwater quality in the San Francisco Bay groundwater basins, 2007—California GAMA Priority Basin Project

Groundwater quality in the approximately 620-square-mile (1,600-square-kilometer) San Francisco Bay study unit was investigated as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The study unit is located in the Southern Coast Ranges of California, in San Francisco, San Mateo, Santa Clara, Alameda, and Contra Costa Counties. The GAMA Priority Basin Project is being conducted by the California State Water Resources Control Board in collaboration with the U.S. Geological Survey (USGS) and the Lawrence Livermore National Laboratory. The GAMA San Francisco Bay study was designed to provide a spatially unbiased assessment of the quality of untreated groundwater within the primary aquifer system, as well as a statistically consistent basis for comparing water quality throughout the State. The assessment is based on water-quality and ancillary data collected by the USGS from 79 wells in 2007 and is supplemented with water-quality data from the California Department of Public Health (CDPH) database. The primary aquifer system is defined by the depth interval of the wells listed in the CDPH database for the San Francisco Bay study unit. The quality of groundwater in shallower or deeper water-bearing zones may differ from that in the primary aquifer system; shallower groundwater may be more vulnerable to surficial contamination. The first component of this study, the status of the current quality of the groundwater resource, was assessed by using data from samples analyzed for volatile organic compounds (VOCs), pesticides, and naturally occurring inorganic constituents, such as major ions and trace elements. Water- quality data from the CDPH database also were incorporated for this assessment. This status assessment is intended to characterize the quality of groundwater resources within the primary aquifer system of the San Francisco Bay study unit, not the treated drinking water delivered to consumers by water purveyors. Relative-concentrations (sample concentration divided by the benchmark concentration) were used for evaluating groundwater quality for those constituents that have Federal and (or) California benchmarks. A relative-concentration greater than (>) 1.0 indicates a concentration greater than a benchmark, and a relative-concentration less than or equal to (≤) 1.0 indicates a concentration equal to or less than a benchmark. Relative-concentrations of organic and special-interest constituents were classified as low (relative- concentration ≤ 0.1), moderate (0.1 < relative- concentration ≤ 1.0), or high (relative-concentration > 1.0). Inorganic constituent relative- concentrations were classified as low (relative-concentration ≤ 0.5), moderate (0.5 < relative-concentration ≤ 1.0), or high (relative- concentration > 1.0). A lower threshold value of relative-concentration was used to distinguish between low and moderate values of organic constituents because organic constituents are generally less prevalent and have smaller relative-concentrations than naturally occurring inorganic constituents. Aquifer-scale proportion was used as the metric for evaluating regional-scale groundwater quality. High aquifer-scale proportion is defined as the percentage of the primary aquifer system that has relative-concentration greater than 1.0 for a particular constituent or class of constituents; proportion is based on an areal rather than a volumetric basis. Moderate and low aquifer-scale proportions were defined as the percentages of the primary aquifer system that have moderate and low relative-concentrations, respectively. Two statistical approaches—grid-based and spatially weighted—were used to evaluate aquifer-scale proportion for individual constituents and classes of constituents. Grid-based and spatially weighted estimates were comparable in the San Francisco Bay study unit (90-percent confidence intervals). Inorganic constituents with health-based benchmarks were present at high relative-concentrations in 5.1 percent of the primary aquifer system, and at moderate relative-concentrations in 25 percent. The high aquifer-scale proportion of inorganic constituents primarily reflected high aquifer-scale proportions of barium (3.0 percent) and nitrate (2.1 percent). Inorganic constituents with secondary maximum contaminant levels were present at high relative-concentrations in 14 percent of the primary aquifer system and at moderate relative-concentrations in 33 percent. The constituents present at high relative-concentrations included total dissolved solids (7.0 percent), chloride (6.1 percent), manganese (12 percent), and iron (3.0 percent). Organic constituents with health-based benchmarks were present at high relative-concentrations in 0.6 percent and at moderate relative-concentrations in 12 percent of the primary aquifer system. Of the 202 organic constituents analyzed for, 32 were detected. Three organic constituents were frequently detected (in 10 percent or more of samples): the trihalomethane chloroform, the solvent 1,1,1-trichloroethane and the refrigerant 1,1,2-trichlorotrifluoroethane. One special-interest constituent, perchlorate, was detected at moderate relative-concentrations in 42 percent of the primary aquifer system. The second component of this work, the understanding assessment, identified some of the primary natural and human factors that may affect groundwater quality by evaluating land use, physical characteristics of the wells, and geochemical conditions of the aquifer. Results from these evaluations were used to explain the occurrence and distribution of constituents in the study unit.

California↗

Plankton communities and summertime declines in algal abundance associated with low dissolved oxygen in the Tualatin River, Oregon

Phytoplankton populations in the Tualatin River in northwestern Oregon are an important component of the dissolved oxygen (DO) budget of the river and are critical for maintaining DO levels in summer. During the low-flow summer period, sufficient nutrients and a long residence time typically combine with ample sunshine and warm water to fuel blooms of cryptophyte algae, diatoms, green and blue-green algae in the low-gradient, slow-moving reservoir reach of the lower river. Algae in the Tualatin River generally drift with the water rather than attach to the river bottom as a result of moderate water depths, slightly elevated turbidity caused by suspended colloidal material, and dominance of silty substrates. Growth of algae occurs as if on a “conveyor belt” of streamflow, a dynamic system that is continually refreshed with inflowing water. Transit through the system can take as long as 2 weeks during the summer low-flow period. Photosynthetic production of DO during algal blooms is important in offsetting oxygen consumption at the sediment-water interface caused by the decomposition of organic matter from primarily terrestrial sources, and the absence of photosynthesis can lead to low DO concentrations that can harm aquatic life. The periods with the lowest DO concentrations in recent years (since 2003) typically occur in August following a decline in algal abundance and activity, when DO concentrations often decrease to less than State standards for extended periods (nearly 80 days). Since 2003, algal populations have tended to be smaller and algal blooms have terminated earlier compared to conditions in the 1990s, leading to more frequent declines in DO to levels that do not meet State standards. This study was developed to document the current abundance and species composition of phytoplankton in the Tualatin River, identify the possible causes of the general decline in algae, and evaluate hypotheses to explain why algal blooms diminish in midsummer. Plankton and water-quality sample data from 2006 to 2008 were combined with parts of a larger discrete-sample and continuous water-quality monitoring dataset and examined to identify patterns in water-quality and algal conditions since 1991, with a particular emphasis on 2003–08. Longitudinal plankton surveys were conducted in 2006–08 at six sites between river miles (RM) 24.5 and 3.4 at 2- to 3-week intervals, or 5–6 per season, and in-situ bioassay experiments were conducted in 2008 to examine the potential effects of wastewater treatment facility (WWTF) effluent and phosphorus additions on phytoplankton biomass and algal photosynthesis. Phytoplankton and zooplankton community composition, streamflow, and water-quality data were analyzed using multivariate statistical techniques to gain insights into plankton dynamics to determine what factors might be most tied to the abundance and characteristics of the phytoplankton assemblages, and identify possible causes of their declines. The connection between low-DO events and algal declines was clearly evident, as bloom crashes were nearly always followed by periods of low DO. Algal blooms occurred each year during 2006–08, producing maximum chlorophyll-a (Chl-a) values in June or July generally in the range of 50–80 micrograms per liter (µg/L). Bloom crashes and absence of sufficient algal photosynthesis in mid- to late-summer contributed to minimum DO concentrations that were less than the State standard of 6.5 milligrams per liter (mg/L) based on the 30-day mean daily concentration, for 62–74 days each year. At times, the absolute minimum State standard (4 mg/L DO) also was not met. To learn more about why low-DO events occurred, specific algal declines during 2003–08 were scrutinized to determine their likely causal factors. From this information, a series of hypotheses were formulated and evaluated in terms of their ability to explain recent declines in algal populations in the river in late summer. Meteorological, streamflow, turbidity, water temperature, and conductance conditions in the Tualatin River during the 2006–08 summer seasons were not atypical. Natural flow comprised the majority (70–80 percent) of flow each year during spring, but then reduced to 38–40 percent during midsummer when WWTF effluent—which contributed as much as 36 percent—and flow augmentation releases comprised a greater fraction of the flow. Summer 2008 was unusual, however, in the prolonged influence from the Wapato Lake agricultural area near Gaston in the upper part of the basin. The previous winter flooding and levee breach at Wapato Lake caused a much greater area of inundation. As a result, drainage from this area continued into July, much later than normal. A subsequent algal bloom in Wapato Lake then seeded the upper Tualatin River, and this drainage had a profound effect on the downstream plankton community. A large blue-green algae bloom developed—the largest in recent memory—prompting a public health advisory for recreational contact for about two weeks. Algal growths and surface blooms are a common feature of the Tualatin River. Most of the dominant algae have growth forms and morphologies that are well suited for planktonic life, employing spines and gas vacuoles to resist settling, forming colonies, and producing mucilage (or toxins) to resist zooplankton grazing. In 2006–08, 143 algal taxa were identified in 117 main-stem samples; diatoms and green algae were more diverse than blue-green, golden, and cryptophyte algae, although these later groups sometimes dominated the overall volumetric abundance (biovolume). The most frequently occurring taxa, occurring in 97–99 percent of samples, were flagellated cryptophytes Cryptomonas erosa and Rhodomonas minuta. Other important algal taxa included centric diatoms Stephanodiscus, Cyclotella, and Melosira species and colonial green algae Scenedesmus and Actinastrum. These taxa comprised the majority of the algal biovolume during much of the growing season. A general seasonal trend in the phytoplankton assemblages was observed, with dominance by filamentous centric diatoms Stephanodiscus and Melosira in spring and early summer, and flagellated cryptophytes and green algae, particularly Chlamydomonas sp., in late-summer; or, in 2008, dominance by blue-green algae Anabaena flos-aquae and Aphanizomenon flos-aquae during the Wapato Lake bloom event. There were 99 zooplankton taxa identified from the Tualatin River in 2006–08, composed primarily of cladocerans, copepods, and rotifers. A seasonal increase in zooplankton abundance was observed in early summer just as or shortly after the phytoplankton population began to increase, with populations growing to 15,000−120,000 organisms per cubic meter in the lower river. Zooplankton abundance showed a predictable and distinct longitudinal downstream increase, particularly downstream of Highway 99W (RM 11.6). Although grazing rates were not measured, the data suggest that, at times, zooplankton grazing may affect algal abundance and species composition in the Tualatin River, with diatoms becoming relatively less abundant and flagellated cryptophytes and green algae relatively more abundant during periods when zooplankton densities were highest. Multivariate statistical analyses identified soluble reactive phosphorus (SRP), natural flow, flow augmentation, and WWTF effluent as important factors influencing Tualatin River phytoplankton populations, with zooplankton density (particularly rotifers and copepods), specific conductance, chloride, and water temperature also having an important influence. Although SRP was highly correlated with the plankton communities, that correlation was likely the result of high or low algal activity (uptake) as SRP concentrations were often reduced to low levels during blooms. While previous studies have already established that phosphorus, among other factors such as flow, places a theoretical cap on the size of the phytoplankton population in the river, sometimes algal declines occur when SRP concentrations are apparently sufficient. To identify alternative causal factors, additional analyses were performed without SRP to focus on other water-quality parameters, zooplankton density, and flow factors. Considering data for all 3 years and including just those samples from the lower Tualatin River not affected by the 2008 Wapato Lake drainage event, three factors (percentage of reservoir flow augmentation, total natural flow, and rotifer density) best explained variations in the phytoplankton assemblages. Analyses focusing on the possible causes of algal declines included the above multivariate analyses, scrutiny of 10 specific instances of declines in algal populations during 2003–08 including several bloom–crash sequences, and analyses of historic routine watershed monitoring data from Clean Water Services. Six factors were hypothesized to be important in causing bloom crashes or impeding blooms from rebounding in August: (1) light limitation from cloudy weather, (2) a reduction in the plankton inocula or “seed” entering the lower river from upstream sources, (3) increased summer streamflows, (4) changes in the dominant sources of flow as the percentage of flow augmentation and WWTF discharges have increased, (5) zooplankton grazing, and (6) low concentrations of bioavailable phosphorus (<0.015 milligram per liter). All of these hypotheses are supported in some fashion by the available data and statistical analyses. Zooplankton grazing, short-term declines in photosynthesis from cloudy weather, total flow as it affects residence time, and the dominant source of flow are primary factors responsible for the low-DO events caused by declines in algae in the lower Tualatin River during late summer. Cloudy weather and increased turbidity are known to inhibit algal growth in the Tualatin River, and slight increases in turbidity in recent years may be a problem. Upstream sources of algae are critical in determining the characteristics and size of downstream populations, as illustrated by the Wapato Lake bloom in 2008, but more data are needed from upstream to fully define the importance of this connection. The sources of flow, through their differential contribution of plankton inocula (quality and amount), were, at times, important factors affecting phytoplankton populations. While SRP concentrations were often most highly correlated with phytoplankton species community, the bioavailability of phosphorus is still somewhat unknown and there are several sources to consider. Preliminary bioassay tests suggested that while treated wastewater effluent may stimulate algae at 30 percent concentrations, negative effects (or decreased stimulation) on Chl-a and DO production may occur at concentrations of 50 percent. Targeted data collection and future research will be needed to further understand the importance of these factors on Tualatin River phytoplankton. While the data and analysis completed for this report provide insights into future research and monitoring that would be useful to continue, additional monitoring of turbidity, Chl-a, and plankton abundance and species composition in the upper part of the basin would enhance our understanding of plankton dynamics and factors affecting phytoplankton abundance in the lower river. Assessment of the key upstream sources of algal inocula via surveys of the major flow sources as well as tributaries and wetlands would provide useful information for the management of river water quality. Other studies that could prove useful for developing management strategies include targeted experiments to evaluate the bioavailability of phosphorus from a variety of sources. New research on phytoplankton–zooplankton interactions, and studies of planktivorous fish, might also provide insight about food web dynamics and potential “top-down” effects of fish predation on the plankton communities. In addition, further development of neural-network or other water-quality models would help to evaluate management strategies and provide forecasts of water-quality conditions. Finally, periodic future reassessments of the available data with the multivariate statistical tools used in this study would be helpful to assess whether and how plankton communities are changing, and to continue to shed light on the importance of factors shaping the plankton. Although certain types and sizes of algal blooms are undesirable, minimum phytoplankton populations are an important part of aquatic food webs and are needed to maintain healthy levels of DO in the river. By understanding the sources, characteristics, causal factors, and responses of the plankton communities, management strategies can be developed to improve DO conditions in the lower Tualatin River during the important summer low-flow period.

Oregon↗

Assessment of aquifer properties, evapotranspiration, and the effects of ditching in the Stoney Brook watershed, Fond du Lac Reservation, Minnesota, 2006-9

The U.S. Geological Survey, in cooperation with the Fond du Lac Band of Lake Superior Chippewa, assessed hydraulic properties of geologic material, recharge, and evapotranspiration, and the effects of ditching on the groundwater resources in the Stoney Brook watershed in the Fond du Lac Reservation. Geologic, groundwater, and surface-water data were collected during 2006&ndash;9 to estimate hydrologic properties in the watershed. Streamflow and groundwater levels in the shallow glacial deposits in the Stoney Brook watershed were analyzed to estimate groundwater-flow directions, groundwater recharge, and evapotranspiration within the watershed and to assess the effect of ditches on surrounding groundwater resources. Groundwater, streamflow, and precipitation data collected during the study (2006&ndash;9) can be used to update the U.S. Department of Agriculture&rsquo;s Natural Resource Conservation Service and Fond du Lac Resource Management Division surface-water models, which are used to evaluate the effect of proposed adjustments to the ditching system on streamflow on wild rice production and aquatic habitats. Specific yields calculated from the well water levels ranged from 0.11 to 0.40, and hydraulic conductivities determined from water levels measured during well slug tests ranged from 1 to 7 feet per day. The values for specific yields were similar to values obtained in other studies done in glacial materials of similar composition in Minnesota. The higher hydraulic conductivity estimate (7 feet per day) was similar to lower hydraulic conductivities estimated in another hydrologic study conducted in Carlton County, Minnesota. The installation of drainage ditches in the Stoney Brook watershed has reduced water levels in lakes connected to the ditch system, and has locally reduced groundwater levels in shallow groundwater adjacent to the ditches and lakes. Differences in near-ditch groundwater hydrographs relative to far-ditch groundwater hydrographs indicate that the effect of the ditches on groundwater is only localized to near-ditch areas. These hydrograph differences resulted in large differences between recharge estimated at wells near and far from ditches. In this study, recharge estimated at wells within 50 feet of a ditch was influenced by ditch-water levels. Annual groundwater recharge estimates from water levels and streamflows during 2006&ndash;9 ranged from 0.36 to 34.8 inches, and varied with climate, geology, and well location relative to ditches. The higher recharge estimates were determined from analysis of groundwater levels in wells near the ditches because the shallow groundwater in these wells received both infiltration from ditches and areal groundwater recharge from precipitation. The water-table fluctuation method using a manual groundwater recession approach for wells far from ditches provided the best estimates of areal groundwater recharge to the shallow glacial aquifer because water levels in these wells were not affected by water infiltrating from ditches (bank storage). For wells more than 400 feet from ditches, mean annual areal groundwater recharge estimates using the manual groundwater recession approach for wells screened mostly in outwash sands during 2007, 2008, and 2009 ranged from 4.47 to 18.6 inches (wells 5, 7, 13, 14 and 15), and ranged from 0.43 to 2.85 inches for wells screened mostly in clayey sand or sandy clay (wells 9 and 16). Recharge estimates at wells far from ditches were similar to basinwide recharge estimates from streamflow. Daily fluctuations in water levels in two wells indicated that the evapotranspiration extinction depth in the Stoney Brook watershed is approximately 4.6 to 6 feet below the land surface. A polynomial regression fit of the daily evapotranspiration rates during 2006&ndash;9 for well 1 produced a total evapotranspiration estimate of 16.1 inches from June 26 to October 6 for every year. Evapotranspiration estimated from daily water-level fluctuations in wells near ditches is relatively high. The ditch-water surface allowed for relatively high evaporation compared to the land surface, which, with a good hydraulic connection to surrounding groundwater, resulted in relatively high fluctuations in daily groundwater levels near ditches, resulting in high evapotranspiration estimates.

Minnesota↗

Status of water quality in groundwater resources used for drinking-water supply in the southeastern San Joaquin Valley, 2013–15—California GAMA Priority Basin Project

The California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project (GAMA-PBP) investigated water quality of groundwater resources used for drinking-water supplies in the Madera-Chowchilla, Kings, Kaweah, Tule, and Tulare Lake groundwater subbasins of the southeastern San Joaquin Valley during 2013–15. The study focused primarily on groundwater resources used for domestic-supply wells in the southeastern San Joaquin Valley (SESJV-D), which correspond mostly to shallower parts of aquifer systems, compared to the groundwater resources used for public-supply wells in the southeastern San Joaquin Valley (SESJV-P). The investigation had three components: (1) characterization of the status of water quality in the SESJV-D, (2) comparison between water quality in the SESJV-D and SESJV-P, and (3) identification of natural and anthropogenic factors that potentially could affect water quality in these resources. The characterization of water quality in the SESJV-D was based on data collected from 198 domestic wells sampled during 2013–15 by the U.S. Geological Survey (USGS); characterization of water quality in the SESJV-P was based on data collected from 124 wells sampled by the USGS during 2005–18 and an additional 1,577 wells with publicly available data reported to the California State Water Resources Control Board Division of Drinking Water (SWRCB-DDW). Measured concentrations were compared to regulatory and non-regulatory drinking-water quality benchmarks. A grid-based method was used to estimate the areal proportions of each study area and the whole southeastern San Joaquin Valley with high (greater than benchmark concentration), moderate (greater than half of the benchmark for inorganic and one-tenth of the benchmark for organic), and low concentrations relative to those benchmarks. Natural and anthropogenic factors that could affect groundwater quality for the SESJV-D were identified in the context of the hydrogeologic setting of the southeastern San Joaquin Valley. The considered factors represented hydrologic conditions and position in the groundwater flow system (well depth, lateral position, presence of hydric soils, percentage of coarse-grained sediment, and aridity index), land-use characteristics (percentages of agricultural, urban, and natural land use, percentage of orchard or vineyard land use, and densities of septic tanks and underground storage tanks near the wells), and geochemical conditions (groundwater age class, oxidation-reduction class, pH, and dissolved oxygen and bicarbonate concentrations). Factors are compared between SESJV-D and SESJV-P at the scale of the five study areas. One or more inorganic constituents with U.S. Environmental Protection Agency (EPA) or California maximum contaminant levels (MCLs) were detected at high concentrations in 47 percent of the SESJV-D and in 32 percent of the SESJV-P. The inorganic constituents most commonly present at high concentrations in the SESJV-D were nitrate, uranium, and arsenic. Within the SESJV-D, the proportion of the study area with high concentrations of inorganic constituents ranged from 19 percent in Madera-Chowchilla to 60 percent in Kings and Tulare Lake. One or more inorganic constituents with California State Water Resources Control Board Division of Drinking Water secondary maximum contaminant levels (SMCL-CAs) were detected at high concentrations in 14 percent of the SESJV-D and in 19 percent of the SESJV-P. The constituents most commonly present at high concentrations were manganese, iron, and total dissolved solids (TDS). Although the proportion of SESJV-D and SESJV-P with high concentrations of TDS greater than the upper SMCL were similar at 4 percent, the proportion of the SESJV-D with moderate concentrations (between the recommended and upper SMCL-CA), 30 percent, was greater than the proportion of the SESJV-P with moderate concentrations, 12 percent. One or more organic constituents with MCLs were present at high concentrations in 19 percent of the SESJV-D and in 12 percent of the SESJV-P. All the constituents detected at high concentrations in the SESJV-D were fumigants, primarily 1,2,3-trichloropropane (1,2,3-TCP) and 1,2-dibromo-3-chloropropane (DBCP). Fumigants also were the constituents most commonly detected at high concentrations in the SESJV-P, although high concentrations of solvents also were detected. The SESJV-D dataset included analysis of many organic constituents without MCL benchmarks and with detection levels far below drinking water benchmark concentrations; detections at these low concentrations can be used as tracers of anthropogenic influence on groundwater. Pesticides and degradates of pesticides were detected in 60 percent of the SESJV-D; the most frequently detected pesticides were the herbicides simazine, didealkylatrazine (CAAT, a degradate of simazine and atrazine), diuron, and bromacil.

California↗

Comparison of water consumption in two riparian vegetation communities along the central Platte River, Nebraska, 2008–09 and 2011

The Platte River is a vital natural resource for the people, plants, and animals of Nebraska. A recent study quantified water use by riparian woodlands along central reaches of the Platte River, Nebraska, finding that water use was mainly regulated below maximum predicted levels. A comparative study was launched through a cooperative partnership between the U.S. Geological Survey, the Central Platte Natural Resources District, the Nebraska Department of Natural Resources, and the Nebraska Environmental Trust to compare water use of a riparian woodland with that of a grazed riparian grassland along the central Platte River. This report describes the results of the 3-year study by the U.S. Geological Survey to measure the evapotranspiration (ET) rates in the two riparian vegetation communities. Evapotranspiration was measured during 2008–09 and 2011 using the eddy-covariance method at a riparian woodland near Odessa, hereinafter referred to as the “woodland site,” and a riparian grassland pasture near Elm Creek, hereinafter referred to as the “grassland site.” Overall, annual ET totals at the grassland site were 90 percent of the annual ET measured at the woodland site, with averages of 653 millimeters (mm) and 726 mm, respectively. Evapotranspiration rates were similar at the grassland site and the woodland site during the spring and fall seasons, but at the woodland site ET rates were higher than those of the grassland site during the peak-growth summer months of June through August. These seasonal differences and the slightly lower ET rates at the grassland site were likely the result of differing plant communities, disturbance effects related to grazing and flooding, and climatic differences between the sites. The annual water balance was calculated for each site and indicated that the predominant factors in the water balance at both sites were ET and precipitation. Annual precipitation for the study period ranged from near to above the normal precipitation of 640 mm. Substantial precipitation fell in May and October 2008 that caused flooding along the Platte River in May of this especially wet year. There was a deficit in precipitation compared to ET at both sites in 2009 and 2011, leading to a net groundwater use of greater than 140 mm per year at the woodland site and greater than 55 mm per year at the grassland site. This indicates that the net annual groundwater use or recharge depends predominately upon the relation between ET and precipitation in these riparian areas with shallow soil layers above the groundwater table. Prior research at the woodland site provided four additional annual water balances dating back to 2002 for comparison with the study period at the woodland site. Perhaps most striking in this comparison was the 25-percent increase in annual ET for 2008–09 and 2011 despite precipitation totals and potential ET rates that were within the range of those measured in 2002–05. As a result, the water balance indicates that groundwater was discharged 2 of the 3 years of the study. This likely was caused by higher groundwater levels and a healthier plant community in 2008–09 and 2011 relative to the drought-affected years of 2002–05. As a result of these changes, the crop coefficients developed for riparian woodlands during the prior research underestimated 2008–09 and 2011 annual ET rates by an average of 35 percent. Though new crop coefficients were developed by this study, the importance of soil-moisture stress and plant community successional dynamics need to be considered when applying these coefficients at other riparian sites or into the future. Nonetheless, their development and the data on which they are based may provide improved understanding of water consumption by riparian grasslands and riparian woodlands along the central Platte River.

Nebraska↗

Influence of septic systems on stream base flow in the Apalachicola-Chattahoochee-Flint River Basin near Metropolitan Atlanta, Georgia, 2012

Septic systems were identified at 241,733 locations in a 2,539-square-mile (mi 2 ) study area that includes all or parts of 12 counties in the Metropolitan Atlanta, Georgia, area. Septic system percolation may locally be an important component of streamflow in small drainage basins where it augments natural groundwater recharge, especially during extreme low-flow conditions. The amount of groundwater reaching streams depends on how much is intercepted by plants or infiltrates to deeper parts of the groundwater system that flows beyond a basin divide and does not discharge into streams within a basin. The potential maximum percolation from septic systems in the study area is 62 cubic feet per second (ft 3 /s), of which 52 ft 3 /s is in the Chattahoochee River Basin and 10 ft 3 /s is in the Flint River Basin. These maximum percolation rates represent 0.4 to 5.7 percent of daily mean streamflow during the 2011–12 period at the farthest downstream gaging site (station 02338000) on the Chattahoochee River, and 0.5 to 179 percent of daily mean streamflow at the farthest downstream gaging site on the Flint River (02344350). To determine the difference in base flow between basins having different septic system densities, hydrograph separation analysis was completed using daily mean streamflow data at streamgaging stations at Level Creek (site 02334578), with a drainage basin having relatively high septic system density of 101 systems per square mile, and Woodall Creek (site 02336313), with a drainage basin having relatively low septic system density of 18 systems per square mile. Results indicated that base-flow yield during 2011–12 was higher at the Level Creek site, with a median of 0.47 cubic feet per second per square mile ([ft 3 /s]/mi 2 ), compared to a median of 0.16 (ft 3 /s)/mi 2 , at the Woodall Creek site. At the less urbanized Level Creek site, there are 515 septic systems with a daily maximum percolation rate of 0.14 ft 3 /s, accounting for 11 percent of the base flow in September 2012. At the more urban Woodall Creek site, there are 50 septic systems with an average daily maximum percolation rate of 0.0097 ft 3 /s, accounting for 5 percent of base flow in September 2012. Streamflow measurements at 133 small drainage basins (less than 5 mi2 in area) during September 2012 indicated no statistically significant difference in streamflow or specific conductance between basins having high and low density of septic systems (HDS and LDS, respectively). The median base-flow yield was 0.04 (f 3 /s)/mi 2 for HDS sites, ranging from 0 to 0.52 (ft 3 /s)/mi 2 , and 0.10 (ft 3 /s)/mi 2 for LDS sites, ranging from 0 to 0.49 (ft 3 /s)/mi 2 . A Wilcoxon rank-sum test indicated the median base-flow yields for HDS and LDS sites were not statistically different, with a p-value of 0.345. Because of the large size of the study area and associated variations in basin characteristics, data collected in September 2012 were also evaluated on the basis of the basins physical characteristics in an attempt to reduce or eliminate other basin characteristics that might affect base flow. Basins were evaluated based on geologic area, four geographic subareas, and 45-meter (147.6 ft) buffer zone; there were no statistically significant differences between median base-flow yield for HDS and LDS basins. It is probable that detection of the contribution from septic system percolation in base flow at many of the sites visited in September 2012 was obscured by a combination of the limitations of measurement accuracy and evapotranspiration. Detection of septic system percolation may also have been complicated by leaky water and sewer mains, which may have resulted in higher streamflows in LDS basins relative to HDS basins.

Georgia↗

Simulation of groundwater flow in the Long Island, New York regional aquifer system for pumping and recharge conditions from 1900 to 2019

The U.S. Geological Survey has developed a transient, groundwater-flow model that simulates hydrologic conditions in the Long Island aquifer system as part of an ongoing (since 2016) multiyear, cooperative investigation with the New York State Department of Environmental Conservation. The goals of this investigation are to assist stakeholders and resource managers to evaluate the response of the hydrologic system to changes in future hydraulic stresses. Responses in the hydrologic system include changes in water levels in the hydrogeologic units; discharge to streams, coastal waters, and subsurface infrastructure; and the extent of saline groundwater in the aquifers. Hydraulic stresses include future water-supply management and changes in land use and infrastructure. The numerical model synthesizes a diverse set of physiographic, geologic, climatic, land-use, and historical population, water use, and infrastructure data to physically represent the Long Island aquifer system from land surface to bedrock and to simulate annual hydrologic conditions between 1900 and 2019. A three-dimensional hydrogeologic framework was developed from existing and recently collected borehole geologic and geophysical data collected as part of a companion drilling program. Water-transmitting properties of the principal aquifer sediments were defined in three dimensions from new and existing lithologic logs. The distribution of recharge from precipitation was estimated from landscape characteristics and climate data. Anthropogenic recharge from wastewater, leaky infrastructure, and storm runoff were estimated from population, infrastructure, and pumping data. Water-use data, including well locations, depths, and pumping rates, were obtained from historical sources and records and used to estimate pumping stresses continuously in time and space, at an annual average time scale. The data were incorporated into a three-dimensional numerical model using the U.S. Geological Survey finite difference modeling code MODFLOW 6; the model encompassed all of Long Island and surrounding surface waters and simulated historical hydrologic conditions from 1900 to 2019. The calibration process involved trial and error adjustments using prior knowledge to improve general fit to observations followed by an inverse calibration to update and optimize input parameters, using an iterative ensemble smoother algorithm implemented in PEST++ version 5.0. This resulted in a model that generally was in good agreement with observed, dynamically varying hydrologic conditions from 1900 to 2019. The calibrated model was used to develop two base-case models for scenario testing of future, hypothetical conditions where one represented average-annual conditions, and one represented average-seasonal conditions from 2010 to 2019. The model representing average-annual conditions was modified further to represent an alternate sea-level position of 6 feet above the North American Vertical Datum of 1988, and the model representing average-seasonal conditions was modified to represent the average seasonal effects of a 5-year drought imposed upon current hydrologic conditions. Recharge is the sole source of water to the aquifer system; groundwater discharges to coastal water and streams and is withdrawn by pumped wells. Model-estimated annual recharge ranged from about 11 inches in 1965 to 41 inches in 1983. On average, from 2010 to 2019, about 23 percent of water was pumped from wells, and about 47 and 27 percent discharged to coastal waters and streams, respectively; the remaining 4 percent was water that moved into storage in the aquifer matrix. Water levels on Long Island vary naturally during time in response to changes in recharge; the amount of variation is largest in the interior of the island, in areas with highest water table altitudes near groundwater divides and lowest near streams and the coastal waters. The total range of water table altitudes on Long Island between 1900 and 2019 ranged from near 0 to more than 70 feet in western parts of Long Island. The largest range in altitudes is in New York City and is associated with areas of large historical withdrawals between the 1920s and the late 1980s. Water table altitudes generally varied by less than 10 feet in eastern Suffolk County, where the aquifer is under more natural conditions. Saltwater intrusion is of great concern on Long Island, particularly in western Long Island where both the unconfined and confined parts of the aquifer system have been intruded in response to large-scale groundwater withdrawals; however, the volume of freshwater in the islandwide aquifer system only has changed by about 5 percent between 1900 and 2019. The decadal change in the freshwater volume was largest during the early and mid-20th century, corresponding to the largest historical pumping, but that volume change did not exceed 1 percent. The negligible change in freshwater volume suggests that saltwater intrusion as of 2019 was limited at an islandwide scale but continues to occur in local areas of Queens and Nassau Counties, adversely affecting current water supplies and limiting future water supplies for affected communities. The regional groundwater model developed for this investigation is a tool that can be used to help determine the viability of current and future water supplies at a regional scale and can be used to support development of additional models at finer scale to support more focused assessments of groundwater sustainability.

New York↗

Investigation of Ground-Water Contamination at Solid Waste Management Unit 12, Naval Weapons Station Charleston, North Charleston, South Carolina

The U.S. Geological Survey and the Naval Facilities Engineering Command Southeast investigated natural and engineered remediation of chlorinated volatile organic compound ground-water contamination at Solid Waste Management Unit 12 at the Naval Weapons Station Charleston, North Charleston, South Carolina. The primary contaminants of interest are tetrachloroethene, 1,1,1-trichloroethane, trichloroethene, cis-1,2-dichloroethene, vinyl chloride, 1,1-dichloroethane, and 1,1-dichloroethene. In general, the hydrogeology of Solid Waste Management Unit 12 consists of a surficial aquifer, composed of sand to clayey sand, overlain by dense clay that extends from about land surface to a depth of about 8 to 10 feet and substantially limits local recharge. During some months in the summer, evapotranspiration and limited local recharge result in ground-water level depressions in the forested area near wells 12MW-12S and 12MW-17S, seasonally reflecting the effects of evapotranspiration. Changes in surface-water levels following Hurricane Gaston in 2004 resulted in a substantial change in the ground-water levels at the site that, in turn, may have caused lateral shifting of the contaminant plume. Hydraulic conductivity, determined by slug tests, is higher along the axis of the plume in the downgradient part of the forests than adjacent to the plume, implying that there is some degree of lithologic control on the plume location. Hydraulic conductivity, hydraulic gradient, sulfur-hexafluoride measurements, and historical data indicate that ground-water flow rates are substantially slower in the forested area relative to upgradient areas. The ground-water contamination, consisting of chlorinated volatile organic compounds, extends eastward in the surficial aquifer from the probable source area near a former underground storage tank. Engineered remediation approaches include a permeable reactive barrier and phytoremediation. The central part of the permeable reactive barrier along the main axis of the contaminant plume appears to be actively removing contamination; however, ground-water contamination is moving around the southern end of the permeable reactive barrier. Changes in the contaminant concentrations along the path of ground-water transport reflect a complex variety of influences. Potential influences include dechlorination, sorption and desorption, transpirative removal by trees, lateral shifting of the plume, and the presence of zones of differing concentrations possibly reflecting one or more pulse releases of contamination from the source area. Near the source area at well 12MW-10S, volatile organic compound concentrations of cis-1,2-dichlorothene, vinyl chloride, 1,1-dichloroethane, and 1,1,1-trichloroethane continued an irregular decline, while tetrachloroethene and 1,1-dichloroethene showed marked fluctuations in concentration during 2005 and 2006. Volatile organic compound concentrations at well 12MW-03S continued to show decreasing concentrations with the June 2006 concentrations being the lowest yet recorded at that well for several volatile organic compounds. Concentration and delta carbon 13 data indicate that in the upgradient part of the plume, tetrachloroethene is being degraded to trichloroethene, which is being degraded to cis-1,2-dichloroethene, and cis-1,2-dichloroethene is accumulating faster than it is being depleted. Ground-water volatile organic compound concentrations also changed in some wells in the forested area in the midpart of the plume. Increasing tetrachloroethene and decreasing trichloroethene and 1,1-dichloroethene concentrations were observed at wells 12MW-05S and 12MW-29S, possibly reflecting a lateral shift in the axis of the contamination plume or an advancing contamination pulse. Substantial decreases in contamination occur in the forested area downgradient from well 12MW-05S. Probable major loss mechanisms in this area include evapotranspiration and sorption.

North Carolina, South Carolina↗

Groundwater quality and age of secondary bedrock aquifers in the glaciated portion of eastern Nebraska, 2016–18

The Eastern Nebraska Water Resources Assessment (ENWRA) project was initiated in 2006 to assist water managers by developing a hydrogeologic framework and water budget for the glaciated portion of eastern Nebraska. Within the ENWRA area, the primary groundwater sources for municipal, domestic, and irrigation water needs are provided by withdrawals from alluvial, buried paleovalley, and the High Plains aquifer (where present). Generally, other bedrock aquifers are considered a secondary water source. However, in some areas, such as parts of Sarpy and Nemaha Counties, these secondary bedrock aquifers are the only source of water within glaciated upland areas. To improve the understanding of the quality, geochemistry, and age of groundwater from bedrock aquifers, the U.S. Geological Survey (USGS), in cooperation with the ENWRA group, which includes the Lewis and Clark, Lower Elkhorn, Lower Platte North, Lower Platte South, Nemaha, and Papio-Missouri River Natural Resources Districts, designed a study to sample 31 wells completed in the secondary bedrock aquifers and analyze samples for major ions, physical properties, nutrients, stable isotopes, and selected age tracers. Of the 31 samples collected for this report, 22 samples were collected from the Dakota aquifer contained in the Dakota Sandstone, 3 from the Niobrara aquifer contained in the Niobrara Formation of Colorado Group, and 6 from Paleozoic aquifers contained in undifferentiated Paleozoic-age units. The results of this study indicate that major ion data collected from the Dakota aquifer can be used for assessing the quality, recharge source, and age of groundwater. Calcium bicarbonate dominant samples were characterized as modern or mixed, indicating that, in these areas, groundwater is unconfined and is recharged by precipitation and (or) surface water. If groundwater extraction rates exceed recharge rates, total dissolved solid concentrations may increase as a result of upwelling of groundwater from deeper units or formations, which can adversely affect groundwater quality. Sampling results presented in this report indicate water quality is good, but that groundwater in the Dakota aquifer with calcium bicarbonate water type may be vulnerable to surface contamination. In contrast, groundwater sampled from the Dakota aquifer, having a dominant water type other than calcium bicarbonate, generally has low dissolved oxygen and nitrate concentrations, and higher concentrations of total dissolved solids and trace elements, including iron and strontium. The geochemical characteristics of noncalcium bicarbonate samples from the Dakota aquifer indicated confining conditions and limited groundwater recharge from local precipitation. Apparent groundwater ages estimated from radiocarbon (carbon-14) sampling of noncalcium bicarbonate samples from the Dakota aquifer indicated that the time of groundwater recharge to the Dakota aquifer occurred during Pleistocene time. Depleted stable isotopes results indicate recharge during a colder climate. Groundwater under confined conditions is not easily recharged from precipitation or surface water. Future groundwater-level monitoring in locations where the Dakota aquifer appears to be confined could provide information to evaluate whether groundwater supplies remain sufficient to meet future municipal, domestic, and irrigation needs. For the Niobrara aquifer and Paleozoic aquifers, the dominant water type was not a diagnostic indicator of recharge source, age, and groundwater quality as with the Dakota aquifer. Most likely this is because the host formation was dominated by calcium-carbonate-rich rocks; however, few samples were collected from these aquifers to be able to confirm this interpretation. Samples collected from wells completed in the Niobrara aquifer and Paleozoic aquifers and characterized as calcium sulfate water type have statistically significantly higher concentrations of total dissolved solids compared to other samples from the Niobrara aquifer and Paleozoic aquifers characterized as calcium bicarbonate. Given that six of the nine of samples collected from the Niobrara and Paleozoic aquifers indicated modern recharge, these secondary bedrock aquifers are reliant on precipitation to sustain groundwater levels and may be vulnerable to a multiyear drought. Well yields of the Niobrara and Paleozoic aquifers are dependent on the presence of secondary porosity and these units offer little storage. Samples collected from wells completed in Paleozoic aquifers were the most isotopically enriched and similar to modern precipitation and had the highest concentrations of nitrate, indicating that groundwater is affected by agricultural activities. Future groundwater sampling would be beneficial to characterize groundwater-quality changes within the Niobrara and Paleozoic aquifers over time.

Nebraska↗

Geohydrology of Big Bear Valley, California: phase 1--geologic framework, recharge, and preliminary assessment of the source and age of groundwater

The Big Bear Valley, located in the San Bernardino Mountains of southern California, has increased in population in recent years. Most of the water supply for the area is pumped from the alluvial deposits that form the Big Bear Valley groundwater basin. This study was conducted to better understand the thickness and structure of the groundwater basin in order to estimate the quantity and distribution of natural recharge to Big Bear Valley. A gravity survey was used to estimate the thickness of the alluvial deposits that form the Big Bear Valley groundwater basin. This determined that the alluvial deposits reach a maximum thickness of 1,500 to 2,000 feet beneath the center of Big Bear Lake and the area between Big Bear and Baldwin Lakes, and decrease to less than 500 feet thick beneath the eastern end of Big Bear Lake. Interferometric Synthetic Aperture Radar (InSAR) was used to measure pumping-induced land subsidence and to locate structures, such as faults, that could affect groundwater movement. The measurements indicated small amounts of land deformation (uplift and subsidence) in the area between Big Bear Lake and Baldwin Lake, the area near the city of Big Bear Lake, and the area near Sugarloaf, California. Both the gravity and InSAR measurements indicated the possible presence of subsurface faults in subbasins between Big Bear and Baldwin Lakes, but additional data are required for confirmation. The distribution and quantity of groundwater recharge in the area were evaluated by using a regional water-balance model (Basin Characterization Model, or BCM) and a daily rainfall-runoff model (INFILv3). The BCM calculated spatially distributed potential recharge in the study area of approximately 12,700 acre-feet per year (acre-ft/yr) of potential in-place recharge and 30,800 acre-ft/yr of potential runoff. Using the assumption that only 10 percent of the runoff becomes recharge, this approach indicated there is approximately 15,800 acre-ft/yr of total recharge in Big Bear Valley. The INFILv3 model was modified for this study to include a perched zone beneath the root zone to better simulate lateral seepage and recharge in the shallow subsurface in mountainous terrain. The climate input used in the INFILv3 model was developed by using daily climate data from 84 National Climatic Data Center stations and published Parameter Regression on Independent Slopes Model (PRISM) average monthly precipitation maps to match the drier average monthly precipitation measured in the Baldwin Lake drainage basin. This model resulted in a good representation of localized rain-shadow effects and calibrated well to measured lake volumes at Big Bear and Baldwin Lakes. The simulated average annual recharge was about 5,480 acre-ft/yr in the Big Bear study area, with about 2,800 acre-ft/yr in the Big Bear Lake surface-water drainage basin and about 2,680 acre-ft/yr in the Baldwin Lake surface-water drainage basin. One spring and eight wells were sampled and analyzed for chemical and isotopic data in 2005 and 2006 to determine if isotopic techniques could be used to assess the sources and ages of groundwater in the Big Bear Valley. This approach showed that the predominant source of recharge to the Big Bear Valley is winter precipitation falling on the surrounding mountains. The tritium and uncorrected carbon-14 ages of samples collected from wells for this study indicated that the groundwater basin contains water of different ages, ranging from modern to about 17,200-years old.The results of these investigations provide an understanding of the lateral and vertical extent of the groundwater basin, the spatial distribution of groundwater recharge, the processes responsible for the recharge, and the source and age of groundwater in the groundwater basin. Although the studies do not provide an understanding of the detailed water-bearing properties necessary to determine the groundwater availability of the basin, they do provide a framework for the future development of a groundwater model that would help to improve the understanding of the potential hydrologic effects of water-management alternatives in Big Bear Valley.

California↗

Quantifying canal leakage rates using a mass-balance approach and heat-based hydraulic conductivity estimates in selected irrigation canals, western Nebraska, 2007 through 2009

The water supply in areas of the North Platte River Basin in the Nebraska Panhandle has been designated as fully appropriated or overappropriated by the Nebraska Department of Natural Resources (NDNR). Enacted legislation (Legislative Bill 962) requires the North Platte Natural Resources District (NPNRD) and the NDNR to develop an Integrated Management Plan (IMP) to balance groundwater and surface-water supply and demand in the NPNRD. A clear understanding of the groundwater and surface-water systems is critical for the development of a successful IMP. The primary source of groundwater recharge in parts of the NPNRD is from irrigation canal leakage. Because canal leakage constitutes a large part of the hydrologic budget, spatially distributing canal leakage to the groundwater system is important to any management strategy. Surface geophysical data collected along selected reaches of irrigation canals has allowed for the spatial distribution of leakage on a relative basis; however, the actual magnitude of leakage remains poorly defined. To address this need, the U.S. Geological Survey, in cooperation with the NPNRD, established streamflow-gaging stations at upstream and downstream ends from two selected canal reaches to allow a mass-balance approach to be used to calculate daily leakage rates. Water-level and sediment temperature data were collected and simulated at three temperature monitoring sites to allow the use of heat as a tracer to estimate the hydraulic conductivity of canal bed sediment. Canal-leakage rates were estimated by applying Darcy's Law to modeled vertical hydraulic conductivity and either the estimated or measured hydraulic gradient. This approach will improve the understanding of the spatial and temporal variability of canal leakage in varying geologic settings identified in capacitively coupled resistivity surveys. The high-leakage potential study reach of the Tri-State Canal had two streamflow-gaging stations and two temperature monitoring sites along its length. Calculated leakage rates from the mass-balance approach varied from year to year and were generally dependent on local climatic conditions, and the timing and magnitude of the initial seasonal diversion into the Tri-State Canal. Leakage rates ranged from 0.98 meter per day (m/d) on June 22, 2007, to about to 0 m/d during July 2009. Drier conditions generally resulted in higher leakage rates because of reduced flow from Spottedtail Creek, lower groundwater levels near Spottedtail Creek, and no unmeasured flow entering the reach. Of the three years studied (2007-09), 2007 was the driest, and therefore had the highest canal leakage rates. The moderately low leakage potential study reach of Interstate Canal had two streamflow-gaging stations and one temperature monitoring site along its length. Excluding the leakage calculations from early May 2007, leakage rates ranged from 0.08 to 0.7 m/d. Less variability in leakage from year to year indicates that climatic conditions may have less of an effect for Interstate Canal compared to Tri-State Canal. This may be because Interstate Canal was cut into the northern edge of the North Platte alluvial valley and consequently the canal bed is well above the local groundwater table resulting in a constant (1 meter per meter [m/m]) hydraulic gradient. Interstate Canal also does not receive any captured flow that can vary substantially year to year. Two temperature monitoring sites were installed within the high-leakage potential reach of Tri-State Canal. Site TCTEMP1 was established in 2007 where the water table was well below the canal bed surface. The vertical hydraulic conductivity of the poorly sorted sand and gravel beneath site TCTEMP1 was estimated using a calibrated one-dimensional VS2DH model. Using a trial-and-error approach, the best-fit vertical hydraulic conductivity for the site TCTEMP1 model domain was 1.1 m/d. Site TCTEMP2 was established at the mouth of Spottedtail Creek where a shallow

Scientific Investigations Report↗

A comparison of runoff quantity and quality from two small basins undergoing implementation of conventional- and low-impact-development (LID) strategies: Cross Plains, Wisconsin, water years 1999–2005

Environmental managers are often faced with the task of designing strategies to accommodate development while minimizing adverse environmental impacts. Low-impact development (LID) is one such strategy that attempts to mitigate environmental degradation commonly associated with impervious surfaces. The U.S. Geological Survey, in cooperation with the Wisconsin Department of Natural Resources, studied two residential basins in Cross Plains, Wis., during water years 1999–2005. A paired-basin study design was used to compare runoff quantity and quality from the two basins, one of which was developed in a conventional way and the other was developed with LID. The conventional-developed basin (herein called “conventional basin”) consisted of curb and gutter, 40-foot street widths, and a fully connected stormwater-conveyance system. The LID basin consisted of grassed swales, reduced impervious area (32-foot street widths), street inlets draining to grass swales, a detention pond, and an infiltration basin. Data collected in the LID basin represented predevelopment through near-complete build-out conditions. Smaller, more frequent precipitation events that produced stormwater discharge from the conventional basin were retained in the LID basin. Only six events with precipitation depths less than or equal to 0.4 inch produced measurable discharge from the LID basin. Of these six events, five occurred during winter months when underlying soils are commonly frozen, and one was likely a result of saturated soil from a preceding storm. In the conventional basin, the number of discharge events, using the same threshold of precipitation depth, was 180, with nearly one-half of those resulting from precipitation depths less than 0.2 inch. Precipitation events capable of producing appreciable discharge in the LID basin were typically those of high intensity or precipitation depth or those that occurred after soils were already saturated. Total annual discharge volume measured from the conventional basin ranged from 1.3 to 9.2 times that from the LID basin. Development of the LID basin did not appreciably alter the hydrologic response to precipitation characterized during predevelopment conditions. Ninety-five percent or more of precipitation in the LID basin was retained during each year of construction from predevelopment through near-complete build-out, surpassing the 90-percent benchmark established for new development by the Wisconsin Department of Natural Resources. The amount of precipitation retained in the conventional basin did not exceed 94 percent and fell below the 90-percent standard 2 of the 6 years monitored. Much of the runoff in the LID basin was retained by an infiltration basin, the largest control structure used to mitigate storm-runoff quantity and quality. The infiltration basin also was the last best-management practice (BMP) used to treat runoff before it left the LID basin as discharge. From May 25, 2002, to September 30, 2005, only 24 of 155 precipitation events exceeded the retention/ infiltrative capacity of the infiltration basin. The overall reduction in runoff volume from these few events was 51 percent. The effectiveness of the infiltration basin decreased as precipitation intensities exceeded 0.5 inch per hour. Annual loads were estimated to characterize the overall effectiveness of low-impact design practices for mitigating delivery of total solids, total suspended solids, and total phosphorus. Annual loads of these three constituents were greater in the LID basin than in the conventional basin in 2000 and 2004. Seventy percent or more of all constituent annual loads were associated with two discharge events in 2000, and a single discharge event produced 50 percent or more of constituent annual loads in 2004. Each of these discharge events was associated with considerable precipitation depths and (or) intensities, ranging from 4.89 to 6.21 inches and from 1.13 to 1.2 inches per hour, respectively. These same storms did not contribute as much of the annual load in the conventional basin. With large storms and saturated soils, the ability of low-impact design techniques to reduce runoff, and thus constituent loads, can be greatly diminished. For both the LID and conventional basins, the temperature of runoff was largely affected by ambient air temperatures. However, the temperature of discharge from the LID basin increased upon runoff cessation. This increase is likely due to solar heating of water that is temporarily stored in the detention pond and infiltration basin.

Wisconsin↗

Groundwater quality and the relation between pH values and occurrence of trace elements and radionuclides in water samples collected from private wells in part of the Kickapoo Tribe of Oklahoma Jurisdictional Area, central Oklahoma, 2011

From 1999 to 2007, the Indian Health Service reported that gross alpha-particle activities and concentrations of uranium exceeded the Maximum Contaminant Levels for public drinking-water supplies in water samples from six private wells and two test wells in a rural residential neighborhood in the Kickapoo Tribe of Oklahoma Jurisdictional Area, in central Oklahoma. Residents in this rural area use groundwater from Quaternary-aged terrace deposits and the Permian-aged Garber-Wellington aquifer for domestic purposes. Uranium and other trace elements, specifically arsenic, chromium, and selenium, occur naturally in rocks composing the Garber-Wellington aquifer and in low concentrations in groundwater throughout its extent. Previous studies have shown that pH values above 8.0 from cation-exchange processes in the aquifer cause selected metals such as arsenic, chromium, selenium, and uranium to desorb (if present) from mineral surfaces and become mobile in water. On the basis of this information, the U.S. Geological Survey, in cooperation with the Kickapoo Tribe of Oklahoma, conducted a study in 2011 to describe the occurrence of selected trace elements and radionuclides in groundwater and to determine if pH could be used as a surrogate for laboratory analysis to quickly and inexpensively identify wells that might contain high concentrations of uranium and other trace elements. The pH and specific conductance of groundwater from 59 private wells were measured in the field in an area of about 18 square miles in Lincoln and Pottawatomie Counties. Twenty of the 59 wells also were sampled for dissolved concentrations of major ions, trace elements, gross alpha-particle and gross beta-particle activities, uranium, radium-226, radium-228, and radon-222 gas. Arsenic concentrations exceeded the Maximum Contaminant Level of 10 micrograms per liter in one sample having a concentration of 24.7 micrograms per liter. Selenium concentrations exceeded the Maximum Contaminant Level of 50 micrograms per liter in one sample having a concentration of 147 micrograms per liter. Both samples had alkaline pH values, 8.0 and 8.4, respectively. Uranium concentrations ranged from 0.02 to 383 micrograms per liter with 5 of 20 samples exceeding the Maximum Contaminant Level of 30 micrograms per liter; the five wells with uranium concentrations exceeding 30 micrograms per liter had pH values ranging from 8.0 to 8.5. Concentrations of uranium and radon-222 and gross alpha-particle activity showed a positive relation to pH, with the highest concentrations and activity in samples having pH values of 8.0 or above. The groundwater samples contained dissolved oxygen and high concentrations of bicarbonate; these characteristics are also factors in increasing uranium solubility. Concentrations of radium-226 and radium-228 (combined) ranged from 0.03 to 1.7 picocuries per liter, with a median concentration of 0.45 picocuries per liter for all samples. Radon-222 concentrations ranged from 95 to 3,600 picocuries per liter with a median concentration of 261 picocuries per liter. Eight samples having pH values ranging from 8.0 to 8.7 exceeded the proposed Maximum Contaminant Level of 300 picocuries per liter for radon-222. Eight samples exceeded the 15 picocuries per liter Maximum Contaminant Level for gross alpha-particle activity at 72 hours (after sample collection) and at 30 days (after the initial count); those samples had pH values ranging from 8.0 to 8.5. Gross beta-particle activity increased in 15 of 21 samples during the interval from 72 hours to 30 days. The increase in gross beta-particle activity over time probably was caused by the ingrowth and decay of uranium daughter products that emit beta particles. Water-quality data collected for this study indicate that pH values above 8.0 are associated with potentially high concentrations of uranium and radon-222 and high gross alpha-particle activity in the study area. High pH values also are associated with potentially high concentrations of arsenic, chromium, and selenium in groundwater when these elements occur in the aquifer matrix along groundwater-flow paths.

Oklahoma↗

Occurrence, Distribution, Sources, and Trends of Elevated Chloride Concentrations in the Mississippi River Valley Alluvial Aquifer in Southeastern Arkansas

Water-quality data from approximately 2,500 sites were used to investigate the distribution of chloride concentrations in the Mississippi River Valley alluvial aquifer in southeastern Arkansas. The large volume and areal distribution of the data used for the investigation proved useful in delineating areas of elevated (greater than 100 milligrams per liter) chloride concentrations, assessing potential sources of saline water, and evaluating trends in chloride distribution and concentration over time. Irrigation water containing elevated chloride concentrations is associated with negative effects to rice and soybeans, two of the major crops in Arkansas, and a groundwater chloride concentration of 100 milligrams per liter is recommended as the upper limit for use on rice. As such, accurately delineating areas with high salinity ground water, defining potential sources of chloride, and documenting trends over time is important in assisting the agricultural community in water management. The distribution and range of chloride concentrations in the study area revealed distinct areas of elevated chloride concentrations. Area I includes an elongated, generally northwest-southeast trending band of moderately elevated chloride concentrations in the northern part of the study area. This band of elevated chloride concentrations is approximately 40 miles in length and varies from approximately 2 to 9 miles in width, with a maximum chloride concentration of 360 milligrams per liter. Area II is a narrow, north-south trending band of elevated chloride concentrations in the southern part of the study area, with a maximum chloride concentration of 1,639 milligrams per liter. A zone of chloride concentrations exceeding 200 milligrams per liter is approximately 25 miles in length and 5 to 6 miles in width. In Area I, low chloride concentrations in samples from wells completed in the alluvial aquifer next to the Arkansas River and in samples from the upper Claiborne aquifer, which underlies the alluvial aquifer, indicate that leakage from the river and upward flow of saline water in underlying aquifers are not likely sources for the saline water in the alluvial aquifer in Area I. A good comparison was noted for chloride concentrations in Area I and surface geomorphology. In the majority of cases, elevated chloride concentrations occurred in backswamp deposits, with low concentrations (less than 50 milligrams per liter) in areas of active or abandoned channel deposits. The fine-grained, clay-rich deposits associated with backswamp areas likely restrict recharge, induce increased ratios between evapotranspiration and recharge, and experience minimal flushing of salts concentrated during evapotranspiration. In Area II, chloride isoconcentration maps of the underlying upper Claiborne aquifer, in addition to samples from wells completed in the middle and lower Claiborne aquifers, showed a similar chloride distribution to that of the alluvial aquifer with decreasing chloride concentrations to the east of the zone of elevated chloride concentrations, which suggests a deeper source of saline water that affects Tertiary and Quaternary aquifer systems. Mixing curves developed from bromide/chloride ratios in water samples from the alluvial aquifer, Tertiary aquifers, and samples of brine water from the Jurrasic Smackover Formation additionally discounted upward flow of saline water from underlying Tertiary formations as a potential mechanism for salinity in the alluvial aquifer in Area II. A review of information on oil exploration wells in Chicot County revealed that most of these wells were drilled from 1960 to 1980, after the elevated chloride concentrations were detected in the early 1950s. The elongated nature of the zone of elevated chloride concentrations in Area II suggests a line source or linear conduit connection with the source. Maps of a fractured limestone in the Smackover Formation in Arkansas, Mississippi, and Louisiana for purpose

Scientific Investigations Report↗

Groundwater-flow and land-subsidence model of Antelope Valley, California

Antelope Valley, California, is a topographically closed basin in the western part of the Mojave Desert, about 50 miles northeast of Los Angeles. The Antelope Valley groundwater basin is about 940 square miles and is separated from the northern part of Antelope Valley by faults and low-lying hills. Prior to 1972, groundwater provided more than 90 percent of the total water supply in the valley; since 1972, it has provided between 50 and 90 percent. Most groundwater pumping in the valley occurs in the Antelope Valley groundwater basin, which includes the rapidly growing cities of Lancaster and Palmdale. Groundwater-level declines of more than 270 feet in some parts of the groundwater basin have resulted in an increase in pumping lifts, reduced well efficiency, and land subsidence of more than 6 feet in some areas. Future urban growth and limits on the supply of imported water may increase reliance on groundwater. In 2011, the Los Angeles County Superior Court of California ruled that the Antelope Valley groundwater basin is in overdraft&mdash;groundwater extractions are in excess of the Court-defined safe yield of the groundwater basin. The Court determined that the safe yield of the adjudicated area of the basin was 110,000 acre-feet per year (acre-ft/yr). Natural recharge is an important component of total groundwater recharge in Antelope Valley; however, the exact quantity and distribution of natural recharge, primarily in the form of mountain-front recharge, is uncertain, with total estimates ranging from 30,000 to 160,000 acre-ft/yr. Technical experts, retained by parties to the adjudication, used 60,000 acre-ft/yr to estimate the sustainable yield of the basin, and this value was used in this study. In order to better understand the uncertainty associated with natural recharge and to provide a tool to aid in groundwater management, a numerical model of groundwater flow and land subsidence in the Antelope Valley groundwater basin was developed using old and new geohydrologic information. The groundwater-flow system consists of three aquifers: the upper, middle, and lower aquifers. The three aquifers, which were identified on the basis of the hydrologic properties, age, and depth of the unconsolidated deposits, consist of gravel, sand, silt, and clay alluvial deposits and clay and silty clay lacustrine deposits. Prior to groundwater development in the valley, recharge was primarily the infiltration of runoff from the surrounding mountains. Groundwater flowed from the recharge areas to discharge areas around the playas where it discharged from the aquifer system as either evapotranspiration or from springs. Partial barriers to horizontal groundwater flow, such as faults, have been identified in the groundwater basin. Water-level declines owing to groundwater development have eliminated the natural sources of discharge, and pumping for agricultural and urban uses have become the primary source of discharge from the groundwater system. Infiltration of return flow from agricultural irrigation has become an important source of recharge to the aquifer system. The groundwater-flow model of the basin was discretized horizontally into a grid of 130 rows and 118 columns of square cells 1 kilometer (0.621 mile) on a side, and vertically into four layers representing the upper (two layers), middle (one layer), and lower (one layer) aquifers. Faults that were thought to act as horizontal-flow barriers were simulated in the model. The model was calibrated to simulate steady-state conditions, represented by 1915 water levels and transient-state conditions during 1915&ndash;95, by using water-level and subsidence data. Initial estimates of the aquifer-system properties and stresses were obtained from a previously published numerical model of the Antelope Valley groundwater basin; estimates also were obtained from recently collected hydrologic data and from results of simulations of groundwater-flow and land-subsidence models of the Edwards Air Force Base area. Some of these initial estimates were modified during model calibration. Groundwater pumpage for agriculture was estimated on the basis of irrigated crop acreage and crop consumptive-use data. Pumpage for public supply, which is metered, was compiled and entered into a database used for this study. Estimated annual agricultural pumpage peaked at 395,000 acre-feet (acre-ft) in 1951 and then declined because of declining agricultural production. Recharge from irrigation return flows was assumed to be 30 percent of agricultural pumpage; delays associated with return flow moving through the unsaturated zone were also simulated. The annual quantity of mountain-front recharge initially was based on estimates from previous studies. The model was calibrated using the PEST software suite; prior information from the area was incorporated through the use of Tikhonov regularization. During model calibration, the estimated mountain-front recharge was reduced from the previous estimate of 30,300 acre-ft/yr to 29,150 acre-ft/yr. Results of the simulations using the calibrated model indicate that simulated groundwater pumpage exceeded recharge in most years, resulting in an estimated cumulative depletion in groundwater storage of 8,700,000 acre-ft during the transient-simulation period (1915&ndash;2005). About 15,000,000 acre-ft of cumulative groundwater pumpage was simulated during the transient-simulation period (1915&ndash;2005), reaching a maximum rate of about 400,000 acre-ft/yr in 1951. Groundwater pumpage resulted in simulated hydraulic heads declining by more than 150 feet (ft) compared to 1915 conditions in agricultural areas. The decline in hydraulic head in the groundwater basin is the result of this depletion of groundwater storage. In turn, the simulated decline in hydraulic head in the groundwater basin has resulted in the decrease in natural discharge from the basin and has caused compaction of aquitards, resulting in land subsidence. The areal distribution of total simulated land subsidence for 2005, after about 90 years of groundwater development, indicates that land subsidence occurred throughout almost the entire Lancaster subbasin, with a maximum of about 9.4 ft in the central and eastern parts of the subbasin. An important objective of this study was to systematically address the uncertainty in estimates of natural recharge and related aquifer parameters by using the groundwater-flow and land-subsidence model with observational data and expert knowledge. After the model was calibrated to the observations and a reasonable parameter set obtained, the parameter null space&mdash;parameter values that do not appreciably affect the model calibration but may have importance for prediction&mdash;was identified. The effect of parameter uncertainty on the estimation of mountain-front recharge was addressed using the Null-Space Monte Carlo method. The Pareto trade-off method of visualizing uncertainty was also used to portray the reasonableness of larger natural-recharge rates. Results indicate that the total mountain-front recharge likely ranges between 28,000 and 44,000 acre-ft/yr, which is appreciably less than published estimates of 60,000 acre-ft/yr. Additionally, expected errors associated with agricultural pumpage estimates used in this study were found to have relatively little effect on the estimates of mountain-front recharge, reflecting the difficulty in increasing recharge through manipulation of other components of the water budget. The calibrated model was used to simulate the response of the aquifer to potential future pumping scenarios: (1) no change in the distribution of pumpage, or status quo; (2) redistribution of pumpage; and (3) artificial recharge. All three of these scenarios specify a total pumpage throughout the Antelope Valley of 110,000 acre-ft/yr according to the safe yield value ruled by the Los Angeles County Superior Court of California. This reduction in groundwater pumpage is assumed uniform throughout the basin, based on a 10-percent reduction of the total pumpage in 2005 to achieve the 110,000 acre-ft/yr level. The calibrated Antelope Valley groundwater-flow and land-subsidence model was used to simulate the hydrologic effects of the three groundwater-management scenarios during a 50-year period by using the reduced, temporally constant, pumpage distribution. Results from the first scenario indicated that the total drawdown observed since predevelopment would continue, with values exceeding 325 ft near Palmdale; consequently, land subsidence would also continue, with additional subsidence (since 2005) exceeding 3 ft in the central part of the Lancaster subbasin. The second scenario evaluated redistributing pumpage from areas in the Lancaster subbasin where simulated hydraulic-head declines were the greatest to areas where declines were smallest. Neither a formal optimization algorithm nor water-rights allocations were considered when redistributing the pumpage. Results indicated that hydraulic heads near Palmdale, where the pumpage was reduced, would recover by about 200 ft compared to 2005 conditions, with only 30 ft of additional drawdown in the northwestern part of the Lancaster subbasin, where the pumpage was increased. The magnitude of the simulated additional land subsidence decreased slightly compared to the first, status quo, scenario but land subsidence continued to be simulated throughout most of the northern part of the Lancaster subbasin. The third scenario consisted of two artificial-recharge simulations along the Upper Amargosa Creek channel and at a site located north of Antelope Buttes. Results indicate that applying artificial recharge at these sites would yield continued drawdowns and associated land subsidence. However, the magnitudes of drawdown and subsidence would be smaller than those simulated in the status quo scenario, indicating that artificial-recharge operations in the Antelope Valley could be expected to reduce the magnitude and extent of continued water-level declines and associated land subsidence.

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Travel Times, Streamflow Velocities, and Dispersion Rates in the Yellowstone River, Montana

The Yellowstone River is a vital natural resource to the residents of southeastern Montana and is a primary source of water for irrigation and recreation and the primary source of municipal water for several cities. The Yellowstone River valley is the primary east-west transportation corridor through southern Montana. This complex of infrastructure makes the Yellowstone River especially vulnerable to accidental spills from various sources such as tanker cars and trucks. In 2008, the U.S. Geological Survey (USGS), in cooperation with the Montana Department of Environmental Quality, initiated a dye-tracer study to determine instream travel times, streamflow velocities, and dispersion rates for the Yellowstone River from Lockwood to Glendive, Montana. The purpose of this report is to describe the results of this study and summarize data collected at each of the measurement sites between Lockwood and Glendive. This report also compares the results of this study to estimated travel times from a transport model developed by the USGS for a previous study. For this study, Rhodamine WT dye was injected at four locations in late September and early October 2008 during reasonably steady streamflow conditions. Streamflows ranged from 3,490 to 3,770 cubic feet per second upstream from the confluence of the Bighorn River and ranged from 6,520 to 7,570 cubic feet per second downstream from the confluence of the Bighorn River. Mean velocities were calculated for each subreach between measurement sites for the leading edge, peak concentration, centroid, and trailing edge at 10 percent of the peak concentration. Calculated velocities for the centroid of the dye plume for subreaches that were completely laterally mixed ranged from 1.83 to 3.18 ft/s within the study reach from Lockwood Bridge to Glendive Bridge. The mean of the completely mixed centroid velocity for the entire study reach, excluding the subreach between Forsyth Bridge and Cartersville Dam, was 2.80 ft/s. Longitudinal dispersion rates of the dye plume for this study ranged from 0.06 ft/s for the subreach upstream from Forsyth Bridge to 2.25 ft/s for the subreach upstream from Calyspo Bridge for subreaches where the dye was completely laterally mixed. A relation was determined between travel time of the peak concentration and time for the dye plume to pass a site (duration). This relation can be used to estimate when the receding concentration of a potential contaminant reaches 10 percent of its peak concentration for accidental spills into the Yellowstone River. Data from this dye-tracer study were used to evaluate velocity and concentration estimates from a transport model developed as part of an earlier USGS study. Comparison of the estimated and calculated velocities for the study reach indicate that the transport model estimates the velocities of the Yellowstone River between Huntley Bridge and Glendive Bridge with reasonable accuracy. Velocities of the peak concentration of the dye plume calculated for this study averaged 10 percent faster than the most probable velocities and averaged 12 percent slower than the maximum probable velocities estimated from the transport model. Peak Rhodamine WT dye concentrations were consistently lower than the transport model estimates except for the most upstream subreach of each dye injection. The most upstream subreach of each dye injection is expected to have a higher concentration because of incomplete lateral mixing. Lower measured peak concentrations for all other sites were expected because Rhodamine WT dye deteriorates when exposed to sunlight and will sorb onto the streambanks and stream bottom. Velocity-streamflow relations developed by using routine streamflow measurements at USGS gaging stations and the transport model can be used to estimate mean streamflow velocities throughout a range of streamflows. The variation in these velocity-streamflow relations emphasizes the uncertainty in estimating the mean streamflow veloc

Scientific Investigations Report↗

Status and understanding of groundwater quality in the North San Francisco Bay Shallow Aquifer study unit, 2012; California GAMA Priority Basin Project (ver. 1.1, February 2018)

Groundwater quality in the North San Francisco Bay Shallow Aquifer study unit (NSF-SA) was investigated as part of the Priority Basin Project of the California Groundwater Ambient Monitoring and Assessment (GAMA) Program. The study unit is in Marin, Mendocino, Napa, Solano, and Sonoma Counties and included two physiographic study areas: the Valleys and Plains area and the surrounding Highlands area. The NSF-SA focused on groundwater resources used for domestic drinking water supply, which generally correspond to shallower parts of aquifer systems than that of groundwater resources used for public drinking water supply in the same area. The assessments characterized the quality of untreated groundwater, not the quality of drinking water. This study included three components: (1) a status assessment , which characterized the status of the quality of the groundwater resources used for domestic supply for 2012; (2) an understanding assessment , which evaluated the natural and human factors potentially affecting water quality in those resources; and (3) a comparison between the groundwater resources used for domestic supply and those used for public supply. The status assessment was based on data collected from 71 sites sampled by the U.S. Geological Survey for the GAMA Priority Basin Project in 2012. To provide context, concentrations of constituents measured in groundwater were compared to U.S. Environmental Protection Agency (EPA) and California State Water Resources Control Board Division of Drinking Water regulatory and non-regulatory benchmarks for drinking-water quality. The status assessment used a grid-based method to estimate the proportion of the groundwater resources that has concentrations of water-quality constituents approaching or above benchmark concentrations. This method provides statistically unbiased results at the study-area scale and permits comparisons to other GAMA Priority Basin Project study areas. In the NSF-SA study unit as a whole, inorganic constituents with human-health benchmarks were detected at high relative concentrations (RCs) in 27 percent of the shallow aquifer system, and inorganic constituents with secondary maximum contaminant levels (SMCL) were detected at high RCs in 24 percent of the system. The inorganic constituents detected at high RCs were arsenic, boron, fluoride, manganese, nitrate, iron, sulfate, and total dissolved solids (TDS). Organic constituents with human-health benchmarks were detected at high RCs in 1 percent of the shallow aquifer system. Of the 148 organic constituents analyzed, 30 constituents were detected, although only 1, chloroform, had a detection frequency greater than 10 percent. Natural and anthropogenic factors that could affect the groundwater quality were evaluated by using results from statistical testing of associations between constituent concentrations and values of potential explanatory factors. Groundwater age class (modern, mixed, or pre-modern), redox class (oxic or anoxic), aquifer lithology class (metamorphic, sedimentary, or volcanic), and dissolved oxygen concentrations were the explanatory factors that explained distribution patterns of most of the inorganic constituents best. Groundwater classified primarily as pre-modern or mixed in age was associated with higher concentrations of arsenic and fluoride than waters classified as modern. Anoxic or mixed redox conditions were associated with higher concentrations of boron, fluoride, and manganese. Similar patterns of association with explanatory variables were seen for inorganic constituents with aesthetic-based benchmarks detected at high concentrations. Nitrate and perchlorate had higher concentrations in oxic than in the anoxic redox class and were positively correlated with urban land use. The NSF-SA water-quality results were compared to those of the GAMA North San Francisco Bay Public-Supply Aquifer study unit (NSF-PA). The NSF-PA was sampled in 2004 and covers much of the same area as the NSF-SA, but focused on the deeper public-supply aquifer system. The comparison of the NSF-PA to the NSF-SA showed that there were more differences between the Valleys and Plains study areas of the two study units than between the Highlands study areas of the two study units. As expected from the shallower depth of wells, the NSF-SA Valleys and Plains study area had a lesser proportion of pre-modern age groundwater and greater proportion of modern age groundwater than the NSF-PA Valleys and Plains study area. In contrast, well depths and groundwater ages were not significantly different between the two Highlands study areas. Arsenic, manganese, and nitrate were present at high RCs, and perchlorate was detected in greater proportions of the NSF-SA Valleys and Plains study area than the NSF-PA Valleys and Plains study area.

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