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At least 1,099 records · Page 61Linked to original sources
USGS2009

Effect of grain-coating mineralogy on nitrate and sulfate storage in the unsaturated zone

Unsaturated-zone sediments and the chemistry of shallow groundwater underlying a small (∼8-km 2 ) watershed were studied to identify the mechanisms responsible for anion storage within the Miocene Bridgeton Formation and weathered Coastal Plain deposits in southern New Jersey. Lower unsaturated-zone sediments and shallow groundwater samples were collected and concentrations of selected ions (including NO 3 − and SO 4 2− ) from 11 locations were determined. Grain size, sorting, and color of the lower unsaturated-zone sediments were determined and the mineralogy of these grains and the composition of coatings were analyzed by petrographic examination, scanning electron microscopy and energy dispersive analysis of x-rays, and quantitative whole-rock x-ray diffraction. The sediment grains, largely quartz and chert (80–94% w/w), are coated with a very fine-grained (<20 μm), complex mixture of kaolinite, halloysite, goethite, and possibly gibbsite and lepidocrocite. The mineral coatings are present as an open fabric, resulting in a large surface area in contact with pore water. Significant correlations between the amount of goethite in the grain coatings and the concentration of sediment-bound SO 4 2− were observed, indicative of anion sorption. Other mineral–chemical relations indicate that negatively charged surfaces and competition with SO 4 2− results in exclusion of NO 3 − from inner sphere exchange sites. The observed NO 3 − storage may be a result of matrix forces within the grain coatings and outer sphere complexation. The results of this study indicate that the mineralogy of grain coatings can have demonstrable effects on the storage of NO 3 − and SO 4 2− in the unsaturated zone.

Vadose Zone Journal↗
USGS2016

Structured heterogeneity in a marine terrace chronosequence: Upland mottling

Soil mottles generally are interpreted as a product of reducing conditions during periods of water saturation. The upland soils of the Santa Cruz, CA, marine terrace chronosequence display an evolving sequence of reticulate mottling from the youngest soil (65 ka) without mottles to the oldest soil (225 ka) with well-developed mottles. The mottles consist of an interconnected network of clay and C-enriched regions (gray, 2.5Y 6/1) bordered by leached parent material (white, 2.5Y 8/1) within a diminishing matrix of oxidized parent material (orange, 7.5YR 5/8). The mottles develop in soils that formed from relatively uniform nearshore sediments and occur below the depth of soil bioturbation. To explore how a presumably wetland feature occurs in an unsaturated upland soil, physical and chemical characteristics of mottle separates (orange, gray, and white) were compared through the deep time represented by the soil chronosequence. Mineralogical, isotopic, and surface-area differences among mottle separates indicate that rhizogenic centimeter-scale mass transfer acting across millennia is an integral part of weathering, pedogenesis, and C and nutrient transfer. Elemental analysis, electron microscopy, and Fe-isotope systematics indicate that mottle development is driven by deep roots together with their fungal and microbial symbionts. Taken together, these data suggest that deep soil horizons on old stable landforms can develop reticulate mottling as the long-term imprint of rhizospheric processes. The processes of rhizogenic mottle formation appear to regulate pedogenesis, nutrients, and C sequestration at depth in unsaturated zones.

California↗
USGS2023

Finchite, Sr(UO2)2(V2O8)·5H2O, a new uranyl sorovanadate with the francevillite anion topology

Finchite (IMA2017-052), Sr(UO 2 ) 2 (V 2 O 8 )·5H 2 O, is the first uranium mineral known to contain essential Sr. The new mineral occurs as yellow-green blades up to ~10 µm in length in surface outcrops of the calcrete-type uranium deposit at Sulfur Springs Draw, Martin County, Texas, U.S.A. Crystals of finchite were subsequently discovered underground in the Pandora mine, La Sal, San Juan County, Utah, U.S.A., as diamond-shaped golden-yellow crystals reaching up to 1 mm. The crystal structure of finchite from both localities was determined using single-crystal X-ray diffraction and is orthorhombic, Pcan, with a = 10.363(6) Å, b = 8.498(5) Å, c = 16.250(9) Å, V = 1431.0(13) Å 3 , Z = 4 (R 1 = 0.0555) from Sulfur Springs Draw; and a = 10.3898(16), b = 8.5326(14), c = 16.3765(3) Å, V = 1451.8(4) Å 3 , Z = 4 (R 1 = 0.0600) from the Pandora mine. Electron-probe microanalysis provided the empirical formula (Sr 0.88 K 0.17 Ca 0.10 Mg 0.07 Al 0.03 Fe 0.02 ) Σ1.20 (UO 2 ) 2 (V 2.08 O 8 )·5H 2 O for crystals from Sulfur Springs Draw, and (Sr 0.50 Ca 0.28 Ba 0.22 K 0.05 ) Σ0.94 (U 0.99 O 2 ) 2 (V 2.01 O 8 )·5H 2 O for crystals from the Pandora mine, based on 17 O atoms per formula unit. The structure of finchite contains uranyl vanadate sheets based upon the francevillite topology. Finchite is a possible immobilization species for both uranium and the dangerous radionuclide 90 Sr because of the relative insolubility of uranyl vanadate minerals in water.

American Mineralogist↗
USGS2023

Fluorine-rich mafic lower crust in the southern Rocky Mountains: The role of pre-enrichment in generating fluorine-rich silicic magmas and porphyry Mo deposits

Fluorine-rich granites and rhyolites occur throughout the southern Rocky Mountains, but the origin of F-enrichment has remained unclear. We test if F-enrichment could be inherited from ancient mafic lower crust by: (1) measuring amphibole compositions, including F and Cl contents, of lower crustal mafic granulite xenoliths from northern Colorado to determine if they are unusually enriched in halogens; (2) analyzing whole-rock elemental and Sr, Nd, and Pb isotopic compositions for upper crustal Cretaceous to Oligocene igneous rocks in Colorado to evaluate their sources; and (3) comparing batch melting models of mafic lower crustal source rocks to melt F and Cl abundances derived from biotite data from the F-rich silicic Never Summer batholith. This approach allows us to better determine if the mafic lower crust was pre-enriched in F, if it is concentrated enough to generate F-rich anatectic melts, and if geochemical data support an ancient lower crustal origin for the F-rich rocks in the southern Rocky Mountains. Electron microprobe analyses of amphibole in lower crustal mafic granulite xenoliths show they contain 0.56–1.38 wt% F and 0.45–0.73 wt% Cl. Titanium in calcium amphibole thermometry indicates that the amphiboles equilibrated at high to ultrahigh temperature conditions (805 to 940 °C), and semiquantitative amphibole thermobarometry indicates the amphiboles equilibrated at 0.5 to 1.0 GPa prior to entrainment in magmas during the Devonian. Mass balance calculations, based on these new measurements, indicate parts of the mafic lower crust in Colorado are at least 3.5 times more enriched in F than average mafic lower crust. Intrusions coeval with the Laramide Orogeny (75 to 38 Ma) pre-date F-rich magmatism in Colorado and have Sr and Nd isotopic compositions consistent with mafic lower crust ± mantle sources, but many of these intrusions contain elevated Sr/Y ratios (>40) that suggest amphibole was a stable phase during magma generation. The F-rich igneous rocks from the Never Summer igneous complex and Colorado Mineral Belt also have Sr and Nd isotopic compositions that overlap with the lower crustal mafic granulite xenoliths, but they have lower Sr/Y, higher Nb and Y abundances, and distinctly less radiogenic 206 Pb/ 204 Pb i compositions than preceding Laramide magmatism. Batch melt modeling indicates low-degree partial melts derived from rocks similar to the mafic lower crustal xenoliths we analyzed can yield silicic melts with >2000 ppm F, similar to estimated F melt concentrations for silicic melts that are interpreted to be parental to evolved leucogranites. We suggest that F-rich silicic melts in the southern Rocky Mountains were sourced from garnet-free mafic lower crust, and that fluid-absent breakdown of amphibole in ultrahigh temperature metamorphic rocks was a key process in their generation. Based on the composition of high-F amphibole measured from lower crustal xenoliths, the temperature of amphibole breakdown and melt generation for these F-enriched source rocks is likely >100 °C higher than similar lower crust with low or average F abundances. As such, these source rocks only melted during periods of unusually high heat flow into the lower crust, such as during an influx of mantle-derived magmas related to rifting or the post-Laramide ignimbrite flare-up in the region. These data have direct implications for the genesis of porphyry Mo mineralization, because they indicate that pre-enrichment of F in the deep crust could be a necessary condition for later anatexis and generation of F-rich magmas.

Colorado, New Mexico↗
USGS2025

Wangyanite, PdNi8S8, a new Pd end-member mineral of the pentlandite group from the J-M reef, Stillwater Complex, Montana, USA

Wangyanite (IMA2024-008a), ideally PdNi 8 S 8 , is a Pd end-member mineral of the pentlandite group that was discovered in the J-M reef of the Stillwater Complex, Montana, USA. Wangyanite occurs as anhedral-subhedral granular crystals 200–400 µm in size, associated with isoferroplatinum, braggite, pentlandite, and chalcopyrite interstitial to plagioclase grains within anorthosite. Wangyanite exhibits a yellowish brown color with a black streak and a metallic luster. It is brittle with uneven fractures, and has a calculated density of 5.14 g/cm 3 . The mineral does not show discernible pleochroism, bireflectance, or anisotropy. It has an average composition of 9.95 wt.% Pd, 31.95 wt.% Ni, 25.02 wt.% Fe, 0.57 wt.% Co, 31.74 wt.% S, totaling 99.23 wt.%. The empirical formula, based on eight sulfur atoms per formula unit, is (Pd 0.76 Co 0.08 ) Σ0.84 (Ni 4.39 Fe 3.60 ) Σ7.99 S 8 . Wangyanite has a cubic cell with a space group of Fm -3 m (#225), having lattice parameters of a = 10.1167(12) Å, V = 1035.4(4) Å 3 , and Z = 4. Its crystal structure has been solved by single-crystal three-dimensional electron diffraction study. The strongest X-ray diffraction lines of wangyanite are claculated at [ d in Å ( I %)( hkl )]: 5.841(14.03)(111), 3.050(100)(311), 1.947(29.16)(115,333), 1.264(11.66)(800), 3.577(8.79)(220), 2.920(20.82)(222), and 2.321(9.34)(331). Wangyanite shares the same crystal structure as pentlandite, but the octahedrally coordinated site is mainly occupied by Pd in wangyanite. Based on the textural features and previous experimental Pd-Fe-Ni-S phase system, wangyanite could form by peritectic reaction between braggite, pentlandite and sulfide liquid. These mineral associations are stable in a Ni-Pd-rich sulfide melt system at about 550 °C or even lower temperature. Therefore, wangyanite can potentially serve as an indicator of the presence of Pd-rich residual melts. The mineral is named in honor of Prof. Christina Yan Wang, a well-known researcher on platinum-group element (PGE) occurrences and enrichment mechanisms in mafic-ultramafic intrusions, notably those deposits related to the Emeishan large igneous province in China.

Montana↗
USGS2006

A shock-induced polymorph of anatase and rutile from the Chesapeake Bay impact structure, Virginia, U.S.A

A shock-induced polymorph (TiO2II) of anatase and rutile has been identified in breccias from the late Eocene Chesapeake Bay impact structure. The breccia samples are from a recent, partially cored test hole in the central uplift at Cape Charles, Virginia. The drill cores from 744 to 823 m depth consist of suevitic crystalline-clast breccia and brecciated cataclastic gneiss in which the TiO2 phases anatase and rutile are common accessory minerals. Electron-microprobe imaging and laser Raman spectroscopy of TiO2 crystals, and powder X-ray diffraction (XRD) of mineral concentrates, confirm that a high-pressure, ??-PbO2 structured polymorph of TiO2 (TiO2II) coexists with anatase and rutile in matrix-hosted crystals and in inclusions within chlorite. Raman spectra of this polymorph include strong bands at wavenumbers (cm-1) 175, 281, 315, 342, 356, 425, 531, 571, and 604; they appear with anatase bands at 397, 515, and 634 cm-1, and rutile bands at 441 and 608 cm-1. XRD patterns reveal 12 lines from the polymorph that do not significantly interfere with those of anatase or rutile, and are consistent with the TiO2II that was first reported to occur naturally as a shock-induced phase in rutile from the Ries crater in Germany. The recognition here of a second natural shock-induced occurrence of TiO2II suggests that its presence in rocks that have not been subjected to ultrahigh-pressure regional metamorphism can be a diagnostic indicator for confirmation of suspected impact structures.

American Mineralogist↗
USGS2007

Solidification and microstructures of binary ice-I/hydrate eutectic aggregates

The microstructures of two-phase binary aggregates of ice-I + salt-hydrate, prepared by eutectic solidification, have been characterized by cryogenic scanning electron microscopy (CSEM). The specific binary systems studied were H 2 O-Na 2 SO 4 , H 2 O-MgSO 4 , H 2 O-NaCl, and H 2 O-H 2 SO 4 ; these were selected based on their potential application to the study of tectonics on the Jovian moon Europa. Homogeneous liquid solutions of eutectic compositions were undercooled modestly (ΔT ~ 1.5 °C); similarly cooled crystalline seeds of the same composition were added to circumvent the thermodynamic barrier to nucleation and to control eutectic growth under (approximately) isothermal conditions. CSEM revealed classic eutectic solidification microstructures with the hydrate phase forming continuous lamellae, discontinuous lamellae, or forming the matrix around rods of ice-I, depending on the volume fractions of the phases and their entropy of dissolving and forming a homogeneous aqueous solution. We quantify aspects of the solidification behavior and microstructures for each system and, with these data, articulate anticipated effects of the microstructure on the mechanical responses of the materials.

American Mineralogist↗
USGS2010

Monoclinic tridymite in clast-rich impact melt rock from the Chesapeake Bay impact structure

X-ray diffraction and Raman spectroscopy confirm a rare terrestrial occurrence of monoclinic tridymite in clast-rich impact melt rock from the Eyreville B drill core in the Chesapeake Bay impact structure. The monoclinic tridymite occurs with quartz paramorphs after tridymite and K-feldspar in a microcrystalline groundmass of devitrified glass and Fe-rich smectite. Electron-microprobe analyses revealed that the tridymite and quartz paramorphs after tridymite contain different amounts of chemical impurities. Inspection by SEM showed that the tridymite crystal surfaces are smooth, whereas the quartz paramorphs contain irregular tabular voids. These voids may represent microporosity formed by volume decrease in the presence of fluid during transformation from tridymite to quartz, or skeletal growth in the original tridymite. Cristobalite locally rims spherulites within the same drill core interval. The occurrences of tridymite and cristobalite appear to be restricted to the thickest clast-rich impact melt body in the core at 1402.02–1407.49 m depth. Their formation and preservation in an alkali-rich, high-silica melt rock suggest initially high temperatures followed by rapid cooling.

American Mineralogist↗
USGS2004

Hydrogeologic controls on the transport and fate of nitrate in ground water beneath riparian buffer zones: Results from thirteen studies across the United States

During the last two decades there has been growing interest in the capacity of riparian buffer zones to remove nitrate from ground waters moving through them. Riparian zone sediments often contain organic carbon, which favors formation of reducing conditions that can lead to removal of nitrate through denitrification. Over the past decade the National Water Quality Assessment (NAWQA) Program has investigated the transport and fate of nitrate in ground and surface waters in study areas across the United States. In these studies riparian zone efficiency in removing nitrate varied widely as a result of variations in hydrogeologic factors. These factors include (1) denitrification in the up-gradient aquifer due to the presence of organic carbon or other electron donors, (2) long residence times (>50 years) along ground-water flow paths allowing even slow reactions to completely remove nitrate, (3) dilution of nitrate enriched waters with older water having little nitrate, (4) bypassing of riparian zones due to extensive use of drains and ditches, and (5) movement of ground water along deep flow paths below reducing zones. By developing a better understanding of the hydrogeologic settings in which riparian buffer zones are likely to be inefficient we can develop improved nutrient management plans.

Water Science and Technology↗
USGS2017

Application of organic petrology in high maturity shale gas systems

Application of incident light microscopy techniques for organic petrology in high temperature thermogenic shale gas systems demonstrates that solid bitumen is the dominant organic matter. Solid bitumen is retained as a residual conversion product as oil-prone kerogen cracks to hydrocarbons or occurs from the cracking of once liquid oil. Oil-prone Type I/II kerogens are not present in shale gas reservoirs, already having converted to hydrocarbons. Type III/IV kerogens (vitrinite and inertinite) are refractory and persist in shale gas reservoirs to high maturity with little morphological change apart from condensation and aromatization causing higher reflectance. Organic petrology applications are most useful for thermal maturity determination and delineation of hydrocarbon windows through measurement of vitrinite reflectance and vitrinite reflectance equivalents from other organic matter (zooclasts and/or solid bitumen). Depositional organo-facies determination generally is not possible in the gas window of thermal maturity; fluorescence microscopy is not useful as organic matter is no longer autofluorescent. Application of scanning electron microscopy (SEM) allows observation of an interconnected nano-scale organic porosity in shale gas systems but suffers from inability to identify organic matter types. SEM approaches to shale gas reservoir characterization therefore should not attempt differentiation of kerogen types or kerogen vs. solid bitumen identification unless correlative organic microscopy is performed. Herein are reviewed organic petrology results as used in the shale gas systems of North America, Europe and China, including SEM applications, citing recent examples from the literature.

Book chapter↗
USGS2019

New and interesting species of the genus Muelleria (Bacillariophyta) from the Antarctic region and South Africa

During a survey of the terrestrial diatom flora of some sub-Antarctic islands in the southern Indian and Atlantic Oceans and of the Antarctic continent, more than 15 taxa belonging to the genus Muelleria were observed. Nine of these taxa are described as new species using light and scanning electron microscopy. Comments are made on their systematic position and how they are distinguished from other species in the genus. Additionally, two previously unrecognized taxa within the genus were discovered in samples from South Africa. One of these, Muelleria taylorii Van de Vijver & Cocquyt sp. nov., is new to science; the other, Muelleria vandermerwei (Cholnoky) Van de Vijver & Cocquyt nov. comb., had been included in the genus Diploneis. The large number of new Muelleria taxa on the (sub)-Antarctic locations is not surprising. Species in Muelleria occur rarely in collections; in many habitats, it is unusual to find more than 1-2 valves in any slide preparation. As a result, records are scarce. The practice of "force-fitting" (shoehorning) specimens into descriptions from common taxonomic keys (and species drift) results in European species, such as M. gibbula and M. linearis, being applied to Antarctic forms in ecological studies. Finally, the typical terrestrial habitats of soils, mosses and ephemeral water bodies of most of these taxa have been poorly studied in the past.

Phycologia↗
USGS1991

Isolation of poxvirus from debilitating cutaneous lesions on four immature grackles (Quiscalus sp.)

Poxvirus was isolated from nodules on four immature grackles ( Quiscalus sp.) collected in two residential areas of Victoria, Texas. All of the birds were emaciated and had nodules on the eyelids, bill, legs, toes, and areas of the skin on the wings, neck, and ventral abdomen. These pox nodules were extensive and probably interfered with both sight and flight. The preliminary diagnosis was confirmed by virus isolation, histopathology, and electron microscopy. Poxvirus was isolated on the chorioallantoic membrane of embryonated hen's eggs and in Muscovy duck embryo fibroblast cell culture. Phaenicia calliphoridae (blowfly) larvae were found in one of the pox nodules, raising the possibility of mechanical transmission of the virus by contaminated adult blowfiles.

Texas↗
USGS1992

Case report: Epithelial intracytoplasmic herpes viral inclusions associated with an outbreak of duck virus enteritis

Several muscovy ducks from a free-roaming flock of 65 muscovy and mallard ducks died over a 3-week period. Three muscovy ducks were necropsied. Gross and microscopic changes were compatible with duck virus enteritis, and the virus was isolated. In addition to intranuclear viral inclusion bodies in several tissues, intracytoplasmic inclusion bodies were present in esophageal and cloacal epithelium, By electron microscopy, the membrane-bound intracytoplasmic inclusions were found to contain enveloped herpesvirus, and nuclei contained herpes viral nucleocapsids.

California↗
USGS2009

A selection and archiving strategy for science records

The U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center archives electronic science collections that total over two petabytes in size and over 100,000 rolls of aerial and satellite film. Limited resources, the evolution of missions, and recommendations from advisory committees have led to the development of a scientific records appraisal process as a means for determining long-term archiving priorities. The process was formed through extensive literature searches describing approaches used to appraise administrative, physical artifacts, and science records. Less information was available that specifically addressed science records; therefore, relevant portions from each records appraisal process was assembled. In addition, involvement with the appropriate stakeholders was deemed critical and led to the active participation of scientists, records managers, and senior managers in the process. As part of the documentation portion of the process, an extensive online tool was developed to capture information describing each collection and detail preservation or access challenges that may be part of a collection. The U.S. National Archives and Records Administration recommends the tool as a best practice for U.S. federal agencies. To date, over 30 science collections have been appraised. This paper will detail the process used to appraise science collections for long-term archiving, the composition and rationale for the tool elements, and the results the USGS has attained.

Conference Paper↗
USGS2015

Surgical insertions of transmitters and telemetry methods in fisheries research

Use of electronic transmitter and monitoring systems to track movements of aquatic animals has increased continuously since the inception of these systems in the mid-1950s. The purpose of the present report is to provide information about veterinary principles and their incorporation into surgical implantation procedures for fish. We also intend to provide insight into the unique challenges of field-based aquatic surgical studies. Within this context, 4 aspects of the process for surgical implantation of transmitters in fish (ie, handling, aseptic technique, anesthesia, and implantation) will be described. Effects of surgical insertion of transmitters (ie, tagging) and aspects of the surgical implantation process where collaboration and professional exchanges among nonveterinarian researchers and veterinarians may be most fruitful will be discussed. Although this report focuses on surgical implantation, the principles and protocols described here (other than incision and suture placement) are also applicable to studies that involve injection of transmitters into fish.

American Journal of Veterinary Research↗
USGS2024

Deformation by pressure solution and grain boundary sliding in a retrograde shear zone in southern New England, USA

Alleghanian phyllonites in a shear zone in southern New England were formed by the retrogression and hydration of a high-grade Acadian pelitic schist. The retrogression was locally incomplete, resulting in both heterogeneous mineralogy and mineral compositions, and in many arrested reaction textures. These features, documented by backscattered electron and element map imaging, and by 40 Ar/ 39 Ar dating, provide a record of the processes active as the schist was converted to a phyllonite. On the margins of the shear zone relic biotite and garnet grains survive but are partially replaced by chlorite. Relic high-grade muscovite flakes containing up to 35 % paragonite (pg) also persist but are entrained in swarms of pg-poor muscovite flakes producing folia with an anastomosing network of muscovite grains of variable composition. Single crystals of pg-rich muscovite are truncated by muscovite in successively younger cross-cutting folia that contain decreasing pg contents, falling to <5% pg in the youngest folia. In the core of the shear zone all high-grade minerals are destroyed, but recrystallization continues with earlier greenschist facies folia replaced by lower grade and pg-poorer muscovite in younger folia. Muscovite grains in truncated folia are commonly kinked and selective recrystallization of muscovite in kink bands to pg-poor-compositions demonstrates that strain energy helped drive recrystallization. The boundaries of these new pg-poor muscovite folia are sharp, and truncations indicate that grain boundary sliding (GBS) involved dissolution. GBS also enabled folding by flexural slip along muscovite grain boundaries. Fold amplitudes increased as chlorite dissolved from fold limbs precipitated in fold hinges producing crescent-shaped saddle-reef-like structures. Together these observations of truncation and replacement by dissolution and precipitation demonstrate that pressure solution and GBS facilitated both the formation of the phyllonitic shear zone and slip along it.

Connecticut↗
USGS2015

The rise of fire: Fossil charcoal in late Devonian marine shales as an indicator of expanding terrestrial ecosystems, fire, and atmospheric change

Fossil charcoal provides direct evidence for fire events that, in turn, have implications for the evolution of both terrestrial ecosystems and the atmosphere. Most of the ancient charcoal record is known from terrestrial or nearshore environments and indicates the earliest occurrences of fire in the Late Silurian. However, despite the rise in available fuel through the Devonian as vascular land plants became larger and trees and forests evolved, charcoal occurrences are very sparse until the Early Mississippian where extensive charcoal suggests well-established fire systems. We present data from the latest Devonian and Early Mississippian of North America from terrestrial and marine rocks indicating that fire became more widespread and significant at this time. This increase may be a function of rising O 2 levels and the occurrence of fire itself may have contributed to this rise through positive feedback. Recent atmospheric modeling suggests an O 2 low during the Middle Devonian (around 17.5%), with O 2 rising steadily through the Late Devonian and Early Mississippian (to 21–22%) that allowed for widespread burning for the first time. In Devonian-Mississippian marine black shales, fossil charcoal (inertinite) steadily increases up-section suggesting the rise of widespread fire systems. There is a concomitant increase in the amount of vitrinite (preserved woody and other plant tissues) that also suggests increased sources of terrestrial organic matter. Even as end Devonian glaciation was experienced, fossil charcoal continued to be a source of organic matter being introduced into the Devonian oceans. Scanning electron and reflectance microscopy of charcoal from Late Devonian terrestrial sites indicate that the fires were moderately hot (typically 500–600 °C) and burnt mainly surface vegetation dominated by herbaceous zygopterid ferns and lycopsids, rather than being produced by forest crown fires. The occurrence and relative abundance of fossil charcoal in marine black shales are significant in that these shales may provide a more continuous record of fire than is preserved in terrestrial environments. Our data support the idea that major fires are not seen in the fossil record until there is both sufficient and connected fuel and a high enough atmospheric O 2 content for it to burn.

American Journal of Science↗
USGS2025

Case study of deep learning image segmentation for the purposes of rapid 2D petrographic analysis in volcanic rocks

Automation using deep learning methods is a useful alternative to manual methods of petrographic segmentation, but often requires user familiarity with coding and/or algorithms. We examine the Dragonfly TM program's deep learning tools for application by users with a variety of skill levels as a method for petrographic image segmentation. An image processing methodology, bimodal image stacking, was created for low-input-data, high-efficacy training of models which can then be applied to varied samples. Using backscatter electron images we show that the resulting model segmentations agree with manual segmentation total and modal crystallinity values within 5%, and calculated plagioclase crystal size distribution (CSD) values within 2σ, despite limitations in discriminating mafic phases. Model creation and training takes <24 hours, 1–3 hours of which are supervised, and the resultant model can then be applied to new uncharacterized samples in <15 minutes per image. This allows for non-experts to create and utilize deep learning models to segment images of variable brightness and texture, at low user-time cost and resulting in size and shape data which are within uncertainty of manual segmentation. While some limitations are noted (for example, sieve-textured phases may need manual correction, and different minerals with similar BSE intensity may not be resolved as separate phases), this methodology can be utilized for general application of models to wide ranges of volcanic crystalline and bubble textures, and to create a library of models for rapid petrological analysis during volcanic eruptions.

Alaska↗