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At least 109 records · Page 6Linked to original sources

Foods, trophic relationships, and migration of Sooty and Short-tailed Shearwaters associated with squid and large-mesh driftnet fisheries in the North Pacific Ocean

We salvaged dead birds from high seas driftnets in the Central North Pacific Ocean during a study of the impact of high seas driftnet fishing on marine ecosystems. Digestive tract contents and stable isotopes of nitrogen and carbon in breast muscles of these birds were analyzed to assess the effect of driftnets on the trophic relationships of marine birds. The diets of Sooty ( Puffinus griseus ) and Short-tailed ( P. tenuirostris ) Shearwaters associated with high seas driftnets in the transitional region of the North Pacific Ocean overlap broadly. The principal differences between them include 1) Sooties prey more heavily on immature stages of invertebrates, especially the barnacle Lepas fascicularis than do Short-tails, 2) Pacific saury ( Cololabis saira ) are the primary fish taken by Sooties while lanternfish ( Myctophidae ) are the primary fish taken by Short-tails, and 3) Sooties take a wider variety of prey than do Short-tails. During the last years of extensive high seas driftnet fishing (early 1990's), both shearwaters augmented their diets with about 15% offal and discards from fishing vessels. Values for stable isotopes of nitrogen and carbon in breast muscle tissues (δ 15 N and δ 15 C) indicate the extent and timing of movements of Sooty Shearwaters: including arrival of migrants from the south Pacific (April-May), east to west movement from the eastern Pacific (May-June), and west to east movement from Japan (August-September). Fall migrant Sooties were not detected. The only movements of Short-tails that we detected were a few south-bound migrants in September-November.

Waterbirds

A baseline analysis of the distribution, host-range, and severity of the rust Puccinia Psidii in the Hawaiian islands, 2005-2010

Puccinia psidii was first described by Winter (1884) on guava ( Psidium guajava L.) in Brazil. The rust is still a major pest of native guava in Brazil and is often referred to as “guava rust” internationally. It is unusual among rust fungi because of its broad and ever-expanding host-range within the Myrtaceae plant family (Simpson et al . 2006). The pathogen is regarded as a major threat to Eucalyptus plantations and other Myrtaceae worldwide (Coutinho et al . 1998, Grgurinovic et al . 2006, Glen et al . 2007). Infections of leaves and meristems are particularly severe on susceptible seedlings, cuttings, young trees, and coppice, causing plants to be stunted and multi-branched, inhibiting normal growth and development, and sometimes causing death to young seedlings (Booth et al . 2000, Rayachhetry et al . 2001). The fungus has expanded its host-range in Brazil, affecting both native and introduced Myrtaceae (Coutinho et al . 1998). Since its discovery in 1884, P. psidii has continually been discovered to have an expanding host-range within the Myrtaceae, affecting hosts throughout much of South and Central America and the Caribbean. Spreading out originally from Brazil in 1884, the fungus has been reported on hosts in the following countries (first record in parentheses): Paraguay (1884), Uruguay (1889), Ecuador (1891), Colombia (1913), Puerto Rico (1913), Cuba (1926), Dominican Republic (1933), Venezuela (1934), Jamaica (1936), Argentina (1946), Dominica (1948), Trinidad and Tobago (1951), Guatemala (1968), United States (Florida; 1977), Mexico (1981), El Salvador (1987), and Costa Rica (1998) (Simpson et al . 2006). It is possible that P. psidii was present in El Salvador and Costa Rica prior to 1980, but was not reported until 1987 and 1998, respectively. Until recently, Puccinia psidii was restricted to the Neotropics, Mexico, and the state of Florida in the United States. While the rust has been present in Florida for over 30 years, only recently has it spread westward. Although possibly present earlier, P. psidii was found in California in November 2005 in a nursery in San Diego County on Myrtus communis and documented by a report in a nursery newsletter (Mellano 2006). Puccinia psidii was first found in Hawai`i on a young plant of `ōhi`a ( Metrosideros polymorpha ) in April 2005, in a nursery on the island of O`ahu (Killgore and Heu 2005; Uchida et al . 2006). The fungus subsequently spread to most islands of the Hawaiian chain, infecting `ōhi`a and other myrtaceous hosts (Hauff 2006, Anderson et al . 2007). P. psidii was first found in Japan in May 2007 on cultivated `ōhi`a (Kawanishi et al . 2009). Most recently, a rust identified as Uredo rangelii was discovered in April 2010 in New South Wales, Australia (Carnegie et al . 2010). This rust is closely related to Puccinia psidii and is part of the guava rust complex described by Simpson et al . (2006). Although treated as a separate species by Simpson et al. (2006), many authors now consider U. rangelii a synonym for U. psidii , which is the anamorph (asexual stage) of P. psidii , and therefore, the same species (Glen et al . 2007, Carnegie et al . 2010). Because of the large diversity of native Myrtaceae present in Australia, the number of Myrtaceae hosts attacked by species of the guava rust complex will likely grow now that U. rangelii has arrived and is spreading in the country. As of this writing (June 2011), 94 species of Myrtaceae have been identified as hosts of U. rangelii in the states of New South Wales and Queensland. Damage is severe on nearly one-third of the species affected, and 16 of these species are threatened or endangered native species (Secretary of Australia, May 2011). The presence of Puccinia psidii in Hawai`i is particularly alarming for at least two reasons: (1) M. polymorpha is the dominant overstory tree of the native forest, and (2) P. psidii is now established in the Pacific region, where numerous Myrtaceae species are native. Native ecosystems in Hawai`i and the Pacific could be seriously affected by the spread of P. psidii , as both native and introduced Myrtaceae are significant components of many different plant communities throughout the region (Glen et al. 2007). Because the guava rust complex (i.e., P. psidii and U. rangelii ) now attacks well over 100 species of Myrtaceae worldwide, it is currently a priority for international quarantine and import restrictions in an effort to prevent further spread among Australasian and Pacific Myrtaceae. Several different studies have been done to determine what degree of genetic variation exists between isolates of Puccinia psidii from many different host plants and many different locations (Langrell et al . 2008, Kawanishi et al . 2009, Kadooka 2010, Graça et al . 2011). So far, all of these studies have shown that all of the Hawaiian samples tested so far have had the same genetic composition. Given that the P. psidii strain in Hawai`i has continually been shown for over five years to lack genetic variation at microsatellite marker sites (which are believed to undergo relatively rapid genetic change), a baseline evaluation of incidence and severity should be especially valuable to provide comparisons with future conditions. Worldwide, 23 Neotropical species in 11 genera and 59 Australasian and Pacific species in 13 genera had been recorded as hosts of Puccinia psidii before 2010 (Simpson et al . 2006, Anderson et al . 2007). Of those 82 species known to be hosts elsewhere, 42 are cultivated or naturalized in Hawai`i. Because of its wide host-range and aggressive pathogenicity, rust disease caused by P. psidii poses a considerable disease threat to many native and cultivated Myrtaceae throughout the world (Coutinho et al . 1998, Booth et al . 2000, Simpson et al . 2006). However, there are few reports comparing the severity of rust infection on native, introduced, and cultivated Myrtaceae (Rayachhetry et al . 2001, Perez et al . 2010). Since government agencies and the public are concerned about the extent of the rust movement within and to Hawai`i (Loope and La Rosa 2008, Loope 2010), there is a need to better understand the incidence, severity, and distribution of P. psidii in Hawai`i. To address that need, this research project was initiated to survey forests, surrounding plant communities, botanical gardens, and commercial nurseries to detect the presence and severity of P. psidii rust infections throughout Hawai`i on plants in the Myrtaceae family. This study provides a baseline on the host distribution and severity to compare current and future impacts of rust infections caused by P. psidii on native, naturalized, and cultivated Myrtaceae in Hawai`i.

Hawai'i

A 50-year Sr/Ca time series from an enclosed, shallow-water Guam coral: In situ monitoring and extraction of a temperature trend, annual cycle, and ENSO and PDO signals

Located on the northern edge of the West Pacific Warm Pool and having a developed economy and modern infrastructure, Guam is well positioned and equipped for obtaining natural records of the west Pacific maritime paleoclimate. This study was a proof of concept to explore whether useful climate proxy records might be obtained from coral at readily accessible, even if geochemically nonoptimal, coastal sites. A 50-year Sr/Ca record (1960–2010) was thus obtained from a shallow-water, near-shore Porites lutea colony at a recreational facility inside Guam's Apra Harbor and compared with local and regional meteorological records, including the El Niño–Southern Oscillation (ENSO) and Pacific Decadal Oscillation (PDO) indices. The accessibility of the site enabled documentation of relevant environmental variables for 16 months (September 2009–December 2010): seawater δ 18 O, pH, seawater cations, and nitrate. Time series of seawater δ 18 O, pH, and cations show evidence of freshwater input from direct rainfall and stream discharge into the harbor. An anomalously higher mean and variable concentrations of Ba suggest the presence of river-borne, fine-grained terrigenous sediment. Nevertheless, the Sr/Ca time series reproduces a long-term warming trend seen in historical records of local air temperature and regional sea-surface temperature (SST) and closely tracks the ENSO and PDO indices over the entire 50-year record. The consistency of the results with Guam's historical instrumental records, previous coral δ 18 O results from Guam obtained by others, and previous Sr/Ca proxy results for SST in similar environments elsewhere demonstrate that accessible near-shore sites—where environmental conditions can be monitored—can produce useful Sr/Ca records of local and regional climate phenomena.

Journal of Coastal Research

Calcite U-Pb dating unravels the age and hydrothermal history of the giant Shuiyindong Carlin-type gold deposit in the Golden Triangle, south China

The ages of Carlin-type gold deposits in the Golden Triangle of South China have long been questioned due to the general lack of minerals unequivocally linked to gold deposition that can be precisely dated using conventional radiogenic isotope techniques. Recent advances in U-Pb methods show that calcite can be used to constrain the ages of hydrothermal processes, but few studies have been applied to ore deposits. Herein, we show that this approach can be used to constrain the timing of hydrothermal activity that generated and overprinted the giant Shuiyindong Carlin-type gold deposit in the Golden Triangle. Three stages of calcite (Cal-1, Cal-2, and Cal-3) have been recognized in this deposit based on crosscutting relationships, cathodoluminescence colors, and chemical (U, Pb, and rare earth element [REE]) and isotope (C, O, Sr) compositions. Cal-1 is texturally associated with ore-stage jasperoid and disseminated Au-bearing arsenian pyrite in hydrothermally altered carbonate rocks, which suggests it is synmineralization. Cal-2 fills open spaces and has a distinct orange cathodoluminescence, suggesting that it precipitated during a second fluid pulse. Cal-1 and Cal-2 have similar carbonate rock-buffered chemical and isotopic compositions. Cal-3 occurs in veins that often contain realgar and/or orpiment and are chemically (low U, Pb, and REE) and isotopically (higher δ 13 C, lower δ 18 O and Sr i values) distinct from Cal-1 and Cal-2, suggesting that it formed from a third fluid. U-Pb isotope analyses, by laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) for U-rich Cal-1 and Cal-2 and by LA-multicollector (MC)-ICP-MS for U-poor Cal-3, yield well-defined age constraints of 204.3 to 202.6, 191.9, and 139.3 to 137.1 Ma for Cal-1, Cal-2, and Cal-3, respectively. These new ages suggest that the Shuiyindong gold deposit formed in the late Triassic and was overprinted by hydrothermal events in the early Jurassic and early Cretaceous. Given the association of Cal-3 with orpiment and realgar, and previous geochronologic studies of several other major gold deposits in the Golden Triangle, we infer that the latest stage of calcite may be associated with an early Cretaceous regional gold metallogenic event. Combined with existing isotopic ages in the region, these new ages lead us to propose that Carlin-type gold deposits in the Golden Triangle formed during two metallogenic episodes in extensional settings, associated with the late Triassic Indochina orogeny and early Cretaceous paleo-Pacific plate subduction. This study shows that the calcite U-Pb method can be used to constrain the timing of Carlin-type gold deposits and successive hydrothermal events.

Golden Triangle, south China

Exploring the correlation between Southern Africa NDVI and Pacific sea surface temperatures: Results for the 1998 maize growing season

Several studies have identified statistically significant correlations between Pacific sea surface temperature anomalies and NDVI anomalies in Southern Africa. The potential predictive value of the relationship was explored for the 1998 maize growing season. Cross-validation techniques suggested a more useful relationship for regions of wet anomaly than for regions of dry anomaly. Observed 1998 NDVI anomaly patterns were consistent with this result. Wet anomalies were observed as expected, but wide areas of expected dry anomalies exhibited average or above-average greeness.

International Journal of Remote Sensing

A preliminary study of effects of feral pig density on native Hawaiian montane rainforest vegetation

This study aimed to examine the effects of different levels of pig density on native Hawaiian forest vegetation. Pig sign was measured across four pig management units in the 'Öla'a Forest from 1998 through 2004 and pig density estimated based upon pig activity. Six paired vegetation monitoring plots were established in the units, each pair straddling a pig fence. Percent cover and species richness of understory vegetation, ground cover, alien species, and preferred pig forage plants were measured in 1997 and 2003 and compared with pig density estimates. Rainfall and hunting effort and success by management personnel were also tracked over the study period. Vegetation monitoring found a higher percentage of native plants in pig-free or low-pig areas compared to those with medium or high pig densities, with no significant change in the percent native plant species between the first and second monitoring periods. Differences between plots were strongly affected by location, with a higher percentage of native plants in western plots, where pig damage has historically been lower. Expansion of this survey with more plots would help improve the statistical power to detect differences in vegetation caused by pigs. Because of the limited vegetation sampling in this study, the results must be viewed as descriptive. We compare the vegetation within 30 x 30 m plots across three thresholds of historical pig density and show how pig densities can change in unanticipated directions within management units. While these results cannot be extrapolated to area-wide effects of pig activity, these data do contribute to a growing body of information on the impacts of feral pigs on Hawaiian plant communities.

Hawai'i

The effects of habitat, climate, and Barred Owls on long-term demography of Northern Spotted Owls

Estimates of species' vital rates and an understanding of the factors affecting those parameters over time and space can provide crucial information for management and conservation. We used mark–recapture, reproductive output, and territory occupancy data collected during 1985–2013 to evaluate population processes of Northern Spotted Owls ( Strix occidentalis caurina ) in 11 study areas in Washington, Oregon, and northern California, USA. We estimated apparent survival, fecundity, recruitment, rate of population change, and local extinction and colonization rates, and investigated relationships between these parameters and the amount of suitable habitat, local and regional variation in meteorological conditions, and competition with Barred Owls ( Strix varia ). Data were analyzed for each area separately and in a meta-analysis of all areas combined, following a strict protocol for data collection, preparation, and analysis. We used mixed effects linear models for analyses of fecundity, Cormack-Jolly-Seber open population models for analyses of apparent annual survival (ϕ), and a reparameterization of the Jolly-Seber capture–recapture model (i.e. reverse Jolly-Seber; RJS) to estimate annual rates of population change (λ RJS ) and recruitment. We also modeled territory occupancy dynamics of Northern Spotted Owls and Barred Owls in each study area using 2-species occupancy models. Estimated mean annual rates of population change (λ) suggested that Spotted Owl populations declined from 1.2% to 8.4% per year depending on the study area. The weighted mean estimate of λ for all study areas was 0.962 (± 0.019 SE; 95% CI: 0.925–0.999), indicating an estimated range-wide decline of 3.8% per year from 1985 to 2013. Variation in recruitment rates across the range of the Spotted Owl was best explained by an interaction between total winter precipitation and mean minimum winter temperature. Thus, recruitment rates were highest when both total precipitation (29 cm) and minimum winter temperature (−9.5°C) were lowest. Barred Owl presence was associated with increased local extinction rates of Spotted Owl pairs for all 11 study areas. Habitat covariates were related to extinction rates for Spotted Owl pairs in 8 of 11 study areas, and a greater amount of suitable owl habitat was generally associated with decreased extinction rates. We observed negative effects of Barred Owl presence on colonization rates of Spotted Owl pairs in 5 of 11 study areas. The total amount of suitable Spotted Owl habitat was positively associated with colonization rates in 5 areas, and more habitat disturbance was associated with lower colonization rates in 2 areas. We observed strong declines in derived estimates of occupancy in all study areas. Mean fecundity of females was highest for adults (0.309 ± 0.027 SE), intermediate for 2-yr-olds (0.179 ± 0.040 SE), and lowest for 1-yr-olds (0.065 ± 0.022 SE). The presence of Barred Owls and habitat covariates explained little of the temporal variation in fecundity in most study areas. Climate covariates occurred in competitive fecundity models in 8 of 11 study areas, but support for these relationships was generally weak. The fecundity meta-analysis resulted in 6 competitive models, all of which included the additive effects of geographic region and annual time variation. The 2 top-ranked models also weakly supported the additive negative effects of the amount of suitable core area habitat, Barred Owl presence, and the amount of edge habitat on fecundity. We found strong support for a negative effect of Barred Owl presence on apparent survival of Spotted Owls in 10 of 11 study areas, but found few strong effects of habitat on survival at the study area scale. Climate covariates occurred in top or competitive survival models for 10 of 11 study areas, and in most cases the relationships were as predicted; however, there was little consistency among areas regarding the relative importance of specific climate covariates. In contrast, meta-analysis results suggested that Spotted Owl survival was higher across all study areas when the Pacific Decadal Oscillation (PDO) was in a warming phase and the Southern Oscillation Index (SOI) was negative, with a strongly negative SOI indicative of El Niño events. The best model that included the Barred Owl covariate (BO) was ranked 4 th and also included the PDO covariate, but the BO effect was strongly negative. Our results indicated that Northern Spotted Owl populations were declining throughout the range of the subspecies and that annual rates of decline were accelerating in many areas. We observed strong evidence that Barred Owls negatively affected Spotted Owl populations, primarily by decreasing apparent survival and increasing local territory extinction rates. However, the amount of suitable owl habitat, local weather, and regional climatic patterns also were related to survival, occupancy (via colonization rate), recruitment, and, to a lesser extent, fecundity, although there was inconsistency in regard to which covariates were important for particular demographic parameters or across study areas. In the study areas where habitat was an important source of variation for Spotted Owl demographics, vital rates were generally positively associated with a greater amount of suitable owl habitat. However, Barred Owl densities may now be high enough across the range of the Northern Spotted Owl that, despite the continued management and conservation of suitable owl habitat on federal lands, the long-term prognosis for the persistence of Northern Spotted Owls may be in question without additional management intervention. Based on our study, the removal of Barred Owls from the Green Diamond Resources (GDR) study area had rapid, positive effects on Northern Spotted Owl survival and the rate of population change, supporting the hypothesis that, along with habitat conservation and management, Barred Owl removal may be able to slow or reverse Northern Spotted Owl population declines on at least a localized scale.

California, Oregon, Washington

Benefits of prescribed flows for salmon smolt survival enhancement vary longitudinally in a highly managed river system

The influence of streamflow on survival of emigrating juvenile Pacific salmonids Oncorhynchus spp. (smolts) is a major concern for water managers throughout the northeast Pacific Rim. However, few studies have quantified flow effects on smolt survival, and available information does not indicate a consistent flow–survival relationship within the typical range of flows under management control. In the Yakima Basin, Washington, the potential effects of streamflow alterations on smolt survival have been debated for over 20 years. Using a series of controlled flow releases from upper basin reservoirs and radiotelemetry, we quantified the relationship between flow and yearling Chinook salmon smolt survival in the 208 km reach between Roza Dam and the Yakima River mouth. A multistate mark–recapture model accounted for weekly variation in flow conditions experienced by tagged fish in four discrete river segments. Smolt survival was significantly associated with streamflow in the Roza Reach [river kilometre (rkm) 208–189] and marginally associated with streamflow in the Sunnyside Reach (rkm 169–77). However, smolt survival was not significantly associated with flow in the Naches and Prosser Reaches (rkm 189–169 and rkm 77–3). This discrepancy indicates potential differences in underlying flow-related survival mechanisms, such as predation or passage impediments. Our results clarify trade-offs between flow augmentation for fisheries enhancement and other beneficial uses, and our study design provides a framework for resolving uncertainties about streamflow effects on migratory fish survival in other river systems.

Washington

Oxidation state of marine manganese nodules

Analyses of the bulk oxidation state of marine manganese nodules indicates that more than 98% of the Mn in deep ocean nodules is present as Mn(IV). The samples were collected from three quite different areas: the hemipelagic environment of the Guatemala Basin, the pelagic area of the North Pacific, and seamounts in the central Pacific. Results of the study suggest that todorokite in marine nodules is fully oxidized and has the following stoichiometry: (K, Na, Ca, Ba) .33 (Mg, Cu, Ni) .76 Mn 5 O 22 (H 2 O) 3.2 .

Geochimica et Cosmochimica Acta

Characterizing mauka-to-makai connections for aquatic ecosystem conservation on Maui, Hawaiʻi

Mauka-to-makai (mountain to sea in the Hawaiian language) hydrologic connectivity – commonly referred to as ridge-to-reef – directly affects biogeochemical processes and socioecological functions across terrestrial, freshwater, and marine systems. The supply of freshwater to estuarine and nearshore environments in a ridge-to-reef system supports the food, water, and habitats utilized by marine fauna . In addition, the ecosystem services derived from this land-to-sea connectivity support social and cultural practices (hereafter referred to as socio-cultural) including fishing, aquaculture, wetland agriculture, religious ceremonies, and recreational activities. To effectively guide island resource management, a better understanding of the linkages from ridge-to-reef across natural and social usages is critical, particularly in the context of climate change, with anticipated increasing temperature and shifting precipitation patterns. The objective of this study was to identify spatial linkages that promote multiple and diverse uses, following the ridge-to-reef concept, at an island-wide scale to identify regions of high conservation importance for aquatic resources. We selected the Island of Maui as a study representative of many Pacific islands. Diverse datasets, including agricultural lands within watersheds, wetland locations, presence of stream species, indicators of freshwater input from streams, coral cover, nearshore fish biomass, socio-cultural data such as fishpond locations, wetland taro cultivation, beach recreation use, and lastly the dynamically downscaled Coupled Model Intercomparison Project Phase (CMIP5) future climate projections scenarios (Representative Concentration Pathway (RCP) 4.5 & 8.5) were used to examine the spatial linkages through hydrological connectivity from land to the sea. Zonation spatial planning software was used to prioritize areas of high management and conservation value and to help inform aquatic resources management. The resulting prioritized areas included many minimally disturbed watersheds in east Maui and western nearshore and coastal zones that are adjacent to diverse coral reefs. These results are driven by the importance of fish biomass and coral reef distribution as well as traditional wetland taro cultivation and coastal access points for recreation. These results underline the importance of examining ridge-to-reef systems for aquatic resource management and including important social and cultural values in resource management upon planning adaptation strategies for climate change. Improving our understanding of diverse natural and socio-cultural influences on habitat conditions and their values in these areas provides an opportunity to strategically plan future management and conservation actions.

Hawaii

Interannual to multidecadal climate forcings on groundwater resources of the U.S. West Coast

Study region The U.S. West Coast, including the Pacific Northwest and California Coastal Basins aquifer systems. Study focus Groundwater response to interannual to multidecadal climate variability has important implications for security within the water–energy–food nexus. Here we use Singular Spectrum Analysis to quantify the teleconnections between AMO, PDO, ENSO, and PNA and precipitation and groundwater level fluctuations. The computer program DAMP was used to provide insight on the influence of soil texture, depth to water, and mean and period of a surface infiltration flux on the damping of climate signals in the vadose zone. New hydrological insights for the region We find that PDO, ENSO, and PNA have significant influence on precipitation and groundwater fluctuations across a north-south gradient of the West Coast, but the lower frequency climate modes (PDO) have a greater influence on hydrologic patterns than higher frequency climate modes (ENSO and PNA). Low frequency signals tend to be preserved better in groundwater fluctuations than high frequency signals, which is a function of the degree of damping of surface variable fluxes related to soil texture, depth to water, mean and period of the infiltration flux. The teleconnection patterns that exist in surface hydrologic processes are not necessarily the same as those preserved in subsurface processes, which are affected by damping of some climate variability signals within infiltrating water.

California, Oregon, Washington

Paleomagnetism and 40Ar/39Ar geochronology of the Plio-Pleistocene Boring Volcanic Field: Implications for the geomagnetic polarity time scale and paleosecular variation

Paleomagnetic directions and 40 Ar/ 39 Ar ages have been determined for samples of lava flows from the same outcrops, where possible, for 84 eruptive units ranging in age from 3200 ka to 60 ka within the Boring Volcanic Field (BVF) of the Pacific Northwest, USA. This study expands upon our previous results for the BVF, and compares the combined results with the current geomagnetic polarity time scale (GPTS). Lava flows with transitional directions were found within the BVF at the Matuyama-Brunhes and Jaramillo-Matuyama polarity boundaries, and replicate ages corresponding to these and other boundaries have been newly ascertained. Although the BVF data generally agree with GPTS chronozone boundaries, they indicate that onset of the Gauss-Matuyama transition and Olduvai subchron occurred significantly earlier than given in the current time scale calibration. Additional comparisons show that the BVF results are consistent with recent statistical models of geomagnetic paleosecular variation.

Physics of the Earth and Planetary Interiors

Statistical correction of lidar-derived digital elevation models with multispectral airborne imagery in tidal marshes

Airborne light detection and ranging (lidar) is a valuable tool for collecting large amounts of elevation data across large areas; however, the limited ability to penetrate dense vegetation with lidar hinders its usefulness for measuring tidal marsh platforms. Methods to correct lidar elevation data are available, but a reliable method that requires limited field work and maintains spatial resolution is lacking. We present a novel method, the Lidar Elevation Adjustment with NDVI (LEAN), to correct lidar digital elevation models (DEMs) with vegetation indices from readily available multispectral airborne imagery (NAIP) and RTK-GPS surveys. Using 17 study sites along the Pacific coast of the U.S., we achieved an average root mean squared error (RMSE) of 0.072 m, with a 40–75% improvement in accuracy from the lidar bare earth DEM. Results from our method compared favorably with results from three other methods (minimum-bin gridding, mean error correction, and vegetation correction factors), and a power analysis applying our extensive RTK-GPS dataset showed that on average 118 points were necessary to calibrate a site-specific correction model for tidal marshes along the Pacific coast. By using available imagery and with minimal field surveys, we showed that lidar-derived DEMs can be adjusted for greater accuracy while maintaining high (1 m) resolution.

Remote Sensing of Environment

Petrology and age of volcanic-arc rocks from the continental margin of the Bering Sea: Implications for Early Eocene relocation of plate boundaries

Eocene volcanic flow and dike rocks from the Beringian margin have arc characteristics, implying a convergent history for this region during the early Tertiary. The extrusive rocks are basalt, basaltic andesite, andesite, and minor dacite and rhyolite. The intrusive sample is from a quartz diorite dike intruding serpentinized peridotite. Major-element oxide contents, particularly FeO*/MgO versus SiO 2 , identify both tholeiitic and calc-alkalic basalt; more silicic lavas have calc-alkalic affinities. Consistent with volcanic-arc compositions, spidergrams show pronounced Nb–Ta depletion and alkali enrichment relative to light-rare-earth-element ( LREE ) abundance. Chondrite-normalized REE plots show relatively flat patterns, with only slight LREE enrichment for tholeiitic compositions and greater LREE enrichment and lower heavy-rare-earth-element ( HREE ) abundance for calc-alkalic compositions. The samples, particularly those with calc-alkalic compositions, are rich in plagioclase that is strongly zoned; the more silicic samples contain orthopyroxene, clinopyroxene, and primary amphibole. The quartz diorite dike contains iron-rich almandine phenocrysts that appear to be magmatic, suggesting emplacement at great depth near the base of the crust or upper mantle.Chemical and mineralogical compositions are similar to those of modern Aleutian-arc lavas. They also resemble volcanic-arc compositions from western mainland Alaska, although greater chemical diversity and a stronger continental influence are observed in the Alaskan mainland rocks.Early Eocene ages of 54.4–50.2 Ma for the Beringian samples are well constrained by conventional K–Ar ages of nine plagioclase separates and by concordant 40 Ar/ 39 Ar incremental heating and total-fusion experiments. A concordant U–Pb zircon age of 53 Ma for the quartz-diorite dike is in good agreement with the K–Ar data.Plate motion studies of the North Pacific Ocean indicate more northerly directed subduction prior to the Tertiary and a continuous belt of arc-type volcanism extending from Siberia, along the Beringian margin, into mainland Alaska. Around 56 Ma (chron 25–24), subduction changed to a more westerly direction and subduction-related volcanism ceased for most of mainland Alaska. The increasingly oblique angle of convergence should have ended subduction along the Beringian margin as well. However, consistent ages of 54–50 Ma indicate a final pulse in arc-type magmatism during this period of plate adjustment, which may be explained by three different models: (1) The northern and central part of the Beringian margin maintained a higher angle of convergence, allowing a final pulse of arc-type magmatism. (2) The rocks erupted in an early, or proto, Aleutian arc and were rafted against the continental margin along transform faults. (3) The rocks erupted along a leaky transform fault, analogous to calc-alkalic volcanism in the southern California borderland.

Alaska

California's Yolo Bypass: Evidence that flood control can be compatible with fisheries, wetlands, wildlife, and agriculture

Unlike conventional flood control systems that frequently isolate rivers from ecologically-essential floodplain habitat, California's Yolo Bypass has been engineered to allow Sacramento Valley floodwaters to inundate a broad floodplain. From a flood control standpoint, the 24,000 ha leveed floodplain has been exceptionally successful based on its ability to convey up to 80% of the flow of the Sacramento River basin during high water events. Agricultural lands and seasonal and permanent wetlands within the bypass provide key habitat for waterfowl migrating through the Pacific Flyway. Our field studies demonstrate that the bypass seasonally supports 42 fish species, 15 of which are native. The floodplain appears to be particularly valuable spawning and rearing habitat for the splittail (Pogonichthys macrolepidotus), a federally-listed cyprinid, and for young chinook salmon (Oncorhynchus tshawytscha), which use the Yolo Bypass as a nursery area. The system may also be an important source to the downstream food web of the San Francisco Estuary as a result of enhanced production of phytoplankton and detrital material. These results suggest that alternative flood control systems can be designed without eliminating floodplain function and processes, key goals of the 1996 Draft AFS Floodplain Management Position Statement.

California

Wall-rock control of cortain pitchblende deposits in Golden Gate Canyon, Jefferson County, Colorado

Carbonate veins cutting pre-Cambrian metamorphic rocks in Golden Gate Canyon contain pitchblende and base-metal sulfides. The veins occupy extensive faults of Laramide age but normally contain pitchblende only where the cut hornblende gneiss. At the Union Pacific prospect, which was studied in detail, pitchblende, hermatite, and some ankerite formed in advance of sulfides, except possibly for minor pyrite. Base-metal sulfides and the bulk of ankerite-calcite vein-filling were deposited after the pitchblende. Chemical analyses show a high ferrous iron content in the hornblende gneiss in contrast to low ferrous iron in the adjacent biotite gneiss. It is hypothesized that ferrous iron released by alteration of hornblende was partly oxidized to hematite by the ore-bearing solutions and, contemporaneously, uranium was reduced and deposited as pitchblende. In other veins, biotite or iron sulfides may have been similarly effective in precipitating pitchblende. Apparently both the ferrous ion and the sulfide ion can serve as reducing agents and control pitchblende deposition. It is suggested that conditions particularly favorable for uranium deposition are present where uranium-bearing solutions had access to rocks rich in ferrous iron or pre-existing sulfides.

Colorado

Histological progression and bacterial load dynamics of Renibacterium salmoninarum in Chinook salmon Oncorhynchus tshawytscha

Renibacterium salmoninarum , the cause of bacterial kidney disease (BKD), severely impacts salmonid populations. Much of our understanding of the BKD pathology in salmonids comes from evaluating fatal infections in wild populations or spawning Pacific Northwest salmonids. Our study investigated the histological progression and bacterial load dynamics of R. salmoninarum infection in Chinook salmon following intraperitoneal injection to enhance understanding of the disease’s dynamics. Seventy presmolt salmon were injected with the ATCC-33209 isolate of R. salmoninarum and monitored over 10 wk. Histological signs of disease were observed in spleen and liver tissues at 1 wk post-injection and in kidney tissues at 4 wk post-injection, with signs of disease increasing over time. Additionally, histopathological analysis revealed splenic and hepatic capsulitis (coelomitis), individual hepatocyte necrosis, progressive granulomatous hepatitis, splenitis, and nephritis with necrosis. Gram staining confirmed the presence of Gram-positive bacteria within macrophages and extracellularly in infected tissues. Quantitative PCR revealed significant increases in bacterial loads in both kidney and liver tissues over the study period, with higher bacterial loads observed in the kidney tissue. Bacterial load was strongly correlated with disease stage, with peak bacterial burdens coinciding with the most severe histological changes. Our study provides a comprehensive account of R. salmoninarum infection and disease progression in Chinook salmon after intraperitoneal injection.

Diseases of Aquatic Organisms