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A phylogeny based on cytochrome-c oxidase gene sequences identifies sympatric Ichthyophonus genotypes in the NE Pacific Ocean

ABSTRACT: In recent decades, evidence has accumulated to suggest that the widespread and highly variable parasite Ichthyophonus hoferi is actually a species complex. Highly plastic morphology and a general lack of defining structures has contributed to the likely underestimate of biodiversity within this group. Molecular methods are a logical next step in the description of these parasites, but markers used to date have been too conserved to resolve species boundaries. Here we use mitochondrial encoded cytochrome-c oxidase (MTCO1) gene sequences and phylogenic analysis to compare Ichthyophonus spp. isolates from several marine and anadromous fish hosts. The resulting phylogeny displays lineage separation among isolates and possible host/niche segregation not previously described. The parasite type that infects Pacific herring Clupea pallasii , Atlantic herring C. harengus , Atlantic salmon Salmo salar , and Pacific staghorn sculpin Oligocottus maculosus (Clade A) is different from that which infects Chinook salmon Oncorhynchus tshawytscha, walleye pollock Gadus chalcogrammus , Greenland halibut Reinhardtius hippoglossoides , and Pacific halibut Hippoglossus stenolepsis (Clade B). MTCO1 sequences confirmed the presence of a more divergent Ichthyophonus sp. isolated from American shad Alosa sapidissima in rivers of eastern North America (Clade C), while American shad introduced to the Pacific Ocean are infected with the same parasite that infects Pacific herring (Clade A). Currently there are no consensus criteria for delimiting species within Ichthyophonidae , but MTCO1 sequences hold promise as a potential species identifying marker and useful epizootiological tool.

Diseases of Aquatic Organisms

Characterization of deep coral and sponge communities in the Gulf of the Farallones National Marine Sanctuary: Rittenburg Bank, Cochrane Bank and the Farallon Escarpment.

Benthic surveys were conducted in the Gulf of Farallones National Marine Sanctuary (GFNMS) aboard R/V Fulmar, October 3-11, 2012 using the large observation-class remotely operated vehicle (ROV) Beagle. The purpose of the surveys was to groundtruth mapping data collected in 2011, and to characterize the seafloor biota, particularly corals and sponges, in order to support Essential Fish Habitat designations under Magnuson-Stevens Act (MSA) and other conservation and management goals under the National Marine Sanctuaries Act (NMSA). A total area of 25,416 sq. meters of sea floor was surveyed during 34 ROV transects. The overall research priorities were: (1) to locate and characterize DSC and sponge habitats in priority areas; (2) to collect information to help understand the value of DSCs and sponges as reservoirs of biodiversity, or habitat for associated species, including commercially important fishes and invertebrates; (3) to assess the condition of DSC/sponge assemblages in relation to potential anthropogenic or environmental disturbances; and (4) to make this information available to support fisheries and sanctuary management needs under MSA and NMSA requirements.

he Gulf of the Farallones National Marine Sanctuar

The shallow-water fish assemblage of Isla del Coco National Park, Costa Rica: Structure and patterns in an isolated, predator-dominated ecosystem

Fishes at Isla del Coco National Park, Costa Rica, were surveyed as part of a larger scientific expedition to the area in September 2009. The average total biomass of nearshore fishes was 7.8 tonnes per ha, among the largest observed in the tropics, with apex predators such as sharks, jacks, and groupers accounting for nearly 40% of the total biomass. The abundance of reef and pelagic sharks, particularly large aggregations of threatened species such as the scalloped hammerhead shark (up to 42 hammerheads ha-1) and large schools of jacks and snappers show the capacity for high biomass in unfished ecosystems in the Eastern Tropical Pacific. However, the abundance of hammerhead and reef whitetip sharks appears to have been declining since the late 1990s, and likely causes may include increasing fishing pressure on sharks in the region and illegal fishing inside the Park. One Galapagos shark tagged on September 20, 2009 in the Isla del Coco National Park moved 255km southeast towards Malpelo Island in Colombia, when it stopped transmitting. These results contribute to the evidence that sharks conduct large-scale movements between marine protected areas (Isla del Coco, Malpelo, Galápagos) in the Eastern tropical Pacific and emphasize the need for regional-scale management. More than half of the species and 90% of the individuals observed were endemic to the tropical eastern Pacific. These high biomass and endemicity values highlight the uniqueness of the fish assemblage at Isla del Coco and its importance as a global biodiversity hotspot.

Cocos Island, Isla Del Coco

Spatial social value distributions for multiple user groups in a coastal national park

Managing public lands to maximize societal benefits requires spatially explicit understanding of societal valuation, and public participation geographic information systems (PPGIS) are increasingly used in coastal settings to accomplish this task. Social Values for Ecosystem Services (SolVES), a PPGIS tool that systematizes the mapping and modeling of social values and cultural ecosystem services, is promising for use in coastal settings but has seen relatively limited applications relative to other PPGIS approaches; it has also, to our knowledge, not yet been applied in a barrier island setting. In this study, we surveyed two visitor groups and residents living near Cape Lookout National Seashore (North Carolina, USA) to understand their social values in the context of the park's management needs. We developed social-value models to evaluate differences between three user groups (fall visitors, summer visitors, and residents) and to evaluate how respondents' experiences, attitudes, and recreational activities influence the locations they value and their most strongly held value types, which included aesthetic, recreation, biodiversity, future, therapeutic, and historic values. We found that accessibility, user types and the seasonality of major recreational activities, and the linear configuration of the barrier island system at Cape Lookout are important influences on the social values held by visitors and residents. The modeling results provide information relevant to management at Cape Lookout and can inform the design of future PPGIS studies in coastal and marine settings.

North Carolina

BioTIME: A database of biodiversity time series for the Anthropocene

Motivation The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km 2 (158 cm 2 ) to 100 km 2 (1,000,000,000,000 cm 2 ). Time period and grain BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. Software format .csv and .SQL.

Global Ecology and Biogeography

First juvenile Chum Salmon confirms successful reproduction for Pacific salmon in the North American Arctic

The distributional extent of Pacific salmon Oncorhynchus spp. in the North American Arctic is unresolved. While adult Pacific salmon have a recurring presence across the Alaskan North Slope and into the Canadian Arctic, it is uncertain if these fish are part of established Arctic populations, vagrants from outside sources reproducing unsuccessfully, or both. Here we present the first confirmed record of a juvenile Chum Salmon O. keta captured in the nearshore marine ecosystem in the North American Arctic. This provides the first scientific evidence of successful spawning and early marine survival of Pacific salmon in the North American Arctic. It was caught near Kaktovik, Alaska in August 2017 with a group of similarly sized age-0 Mackenzie River Arctic Cisco Coregonus autumnalis . Stable isotope and otolith microchemistry analyses are consistent with use of the nearshore estuarine corridor from the Mackenzie River west along the northern coast. This contributes critical information needed to identify, manage, and conserve biodiversity at the northern range edge, and will help to clarify the status of Pacific salmon as potentially emerging fisheries develop in the North American Arctic due to climate warming.

Alaska

Predicting sea-level rise vulnerability of terrestrial habitat and wildlife of the Northwestern Hawaiian Islands

If current climate change trends continue, rising sea levels may inundate low-lying islands across the globe, placing island biodiversity at risk. Recent models predict a rise of approximately one meter (1 m) in global sea level by 2100, with larger increases possible in areas of the Pacific Ocean. Pacific Islands are unique ecosystems home to many endangered endemic plant and animal species. The Northwestern Hawaiian Islands (NWHI), which extend 1,930 kilometers (km) beyond the main Hawaiian Islands, are a World Heritage Site and part of the Papahanaumokuakea Marine National Monument. These NWHI support the largest tropical seabird rookery in the world, providing breeding habitat for 21 species of seabirds, 4 endemic land bird species and essential foraging, breeding, or haul-out habitat for other resident and migratory wildlife. In recent years, concern has grown about the increasing vulnerability of the NWHI and their wildlife populations to changing climatic patterns, particularly the uncertainty associated with potential impacts from global sea-level rise (SLR) and storms. In response to the need by managers to adapt future resource protection strategies to climate change variability and dynamic island ecosystems, we have synthesized and down scaled analyses for this important region. This report describes a 2-year study of a remote northwestern Pacific atoll ecosystem and identifies wildlife and habitat vulnerable to rising sea levels and changing climate conditions. A lack of high-resolution topographic data for low-lying islands of the NWHI had previously precluded an extensive quantitative model of the potential impacts of SLR on wildlife habitat. The first chapter (chapter 1) describes the vegetation and topography of 20 islands of Papahanaumokuakea Marine National Monument, the distribution and status of wildlife populations, and the predicted impacts for a range of SLR scenarios. Furthermore, this chapter explores the potential effects of SLR on wildlife breeding habitats for each island. The subsequent chapter (chapter 2) details a study of the Laysan Island ecosystem, describing a quantitative model that incorporates SLR, storm wave, and rising groundwater inundation. Wildlife, storm, and oceanographic data allowed for an assessment of the phenological and spatial vulnerability of Laysan Island's breeding bird species to SLR and storms. Using remote sensing and geospatial techniques, we estimated topography, classified vegetation, modeled SLR, and evaluated a range of climate change scenarios. On the basis of high-resolution airborne data collected during 2010-11 (root-mean-squared error = 0.05-0.18 m), we estimated the maximum elevation of 20 individual islands extending from Kure Atoll to French Frigate Shoals (range: 1.8-39.7 m) and computed the mean elevation (1.7 m, standard deviation 1.1 m) across all low-lying islands. We also analyzed general climate models to describe rainfall and temperature scenarios expected to influence adaptation of some plants and animals for this region. Outcomes for the NWHI predicted an increase in temperature of 1.8-2.6 degrees Celsius (°C) and an annual decrease in precipitation of 24.7-76.3 millimeters (mm) across the NWHI by 2100. Our models of passive SLR (excluding wave-driven effects, erosion, and accretion) showed that approximately 4 percent of the total land area in the NWHI will be lost with scenarios of +1.0 m of SLR and 26 percent will be lost with +2.0 m of SLR. Some atolls are especially vulnerable to SLR. For example, at Pearl and Hermes Atoll our analysis indicated substantial habitat losses with 43 percent of the land area inundated at +1.0 m SLR and 92 percent inundated at +2.0 m SLR. Across the NWHI, seven islands will be completely submerged with +2.0 m SLR. The limited global ranges of some tropical nesting birds make them particularly vulnerable to climate change impacts in the NWHI. Climate change scenarios and potential SLR impacts presented here emphasize the need for early climate change adaptation and mitigation planning, especially for species with limited breeding distributions and/or ranges restricted primarily to the low-lying NWHI: Cyperus pennatiformis var. bryanii , Black-footed Albatross ( Phoebastria nigripes ), Laysan Albatross ( P. immutabilis ), Bonin Petrel ( Pterodroma hypoleuca ), Gray-backed Tern ( Onychoprion lunatus ), Laysan Teal ( Anas laysanensis ), Laysan Finch ( Telespiza cantans ), and Hawaiian monk seal ( Monachus schauinslandi ). Furthermore, SLR scenarios that include the effects of wave dynamics and groundwater rise may indicate amplified vulnerability to climate change driven habitat loss on low-lying islands. In chapter 2, we incorporated the combined effects of SLR, dynamic wave-driven inundation, and rising groundwater in a quantitative study specifically for the Laysan Island ecosystem. This is the first hydrodynamic model to simulate the combined impacts of SLR and wave-driven inundation in the NWHI. We developed a high-resolution digital elevation model (mean vertical accuracy of 0.32 m) for the island. Then using recent satellite imagery, geospatial models, and historical oceanographic, storm, and biological data we estimated potential inundation extent, habitat loss, and wildlife population impacts for a range of potential SLR scenarios (0.00, +0.50, +1.00, +1.50, and +2.00 m) that may occur over the next century. Additionally, we estimated the carrying capacity of Laysan Island for five species based on the available population monitoring data and described how potential losses in nesting habitat could influence population dynamics for Black-footed Albatross, Laysan Albatross, Red-footed Booby (Sula sula), Laysan Teal, and Laysan Finch. For some other seabird populations (Masked Booby, S. dactylatra ; Brown Booby, S. leucogaster ; Great Frigatebird, Fregata minor ; and Sooty Tern, Onychoprion fuscata ), we used recent colony distribution data, land cover maps, and nesting behavior to estimate potential losses of nesting habitat from SLR and wave-driven inundation. We observed far greater potential impacts of SLR to wildlife with the dynamic wave-driven modeling approach than with the passive modeling approach. Depending on SLR scenario and coastal orientation, during storms under a +2.00 m SLR scenario, the wave-driven inundation model predicted three times more inundation than the passive model (17.2 percent of total terrestrial area versus 4.6 percent, respectively). Large-wave events generally added 1 m of water height to passive inundation surfaces, therefore our dynamic models (during storm events) forecasted comparable inundation extents earlier than passive models. Although wave-driven water levels were highest in the northwest quadrant of Laysan Island, the greatest extent of inundation occurred in the southeast where coastal dunes less than 3 m above mean sea level provide little protection from wave-driven inundation. When wave-driven inundation was included in the SLR model for Laysan Island greater nesting habitat loss and potential impacts on wildlife population dynamics were predicted. The consequences of habitat loss due to SLR may be worse for species with colonies in the wave-exposed coastal zones (for example, Black-footed Albatross) and for populations already near the island's carrying capacity (for example, Laysan Teal). Species whose peak incubation and chick-rearing periods coincide with seasonally high wave heights also will be increasingly vulnerable, especially those species nesting on the ground in areas vulnerable to inundation, such as Gray-backed Tern and Black-footed Albatross. Other species that have space for population growth, or are not restricted to a narrow range of habitat types on Laysan (for instance, Sooty Terns), may be less sensitive to habitat loss from SLR over the next century. Our assessments of inundation risk, habitat loss, and wildlife species vulnerability synthesize current knowledge about individual islands and contribute to a broader understanding of the impacts of inundation from SLR and storm-induced waves. Yet, most NWHI and their bird populations lack monitoring data to evaluate adaptations to and impacts of climate change. Exceptions include some data sets from long-term monitoring of wildlife populations, tides, or weather at French Frigate Shoals, Laysan Island, and Midway Atoll. These data sets are potentially valuable baselines, which could be informative for adaptive learning (integrating management and science) to predict, adapt, and mitigate the effects of climate change on NWHI wildlife in the future. This study provides the first quantitative vulnerability assessment for all of the low-lying NWHI, and results identify biological communities, locales, and resident endangered species of Papahanaumokuakea Marine National Monument expected to be at risk from SLR. This report is also intended as a reference for managers and conservation planners, a tool to identify and potentially reduce uncertainty, and a starting place for developing climate change monitoring priorities and future scientific studies.

Hawai'i

An assessment of the representation of ecosystems in global protected areas using new maps of World Climate Regions and World Ecosystems

Representation of ecosystems in protected area networks and conservation strategies is a core principle of global conservation priority setting approaches and a commitment in Aichi Target 11 of the Convention on Biological Diversity. The 2030 Sustainable Development Goals (SDGs) explicitly call for the conservation of terrestrial, freshwater, and marine ecosystems. Accurate ecosystem distribution maps are required to assess representation of ecosystems in protected areas, but standardized, high spatial resolution, and globally comprehensive ecosystem maps have heretofore been lacking. While macroscale global ecoregions maps have been used in global conservation priority setting exercises, they do not identify distinct localized ecosystems at the occurrence (patch) level, and instead describe large ecologically meaningful areas within which additional conservation planning and management are necessary. We describe a new set of maps of globally consistent climate regions and ecosystems at a much finer spatial resolution (250 m) than existing ecological regionalizations. We then describe a global gap analysis of the representation of these ecosystems in protected areas. The new map of terrestrial World Ecosystems was derived from the objective development and integration of 1) global temperature domains, 2) global moisture domains, 3) global landforms, and 4) 2015 global vegetation and land use. These new terrestrial World Ecosystems do not include either freshwater or marine ecosystems, but analog products for the freshwater and marine domains are in development. A total of 431 World Ecosystems were identified, and of these a total of 278 units were natural or semi-natural vegetation/environment combinations, including different kinds of forestlands, shrublands, grasslands, bare areas, and ice/snow regions. The remaining classes were different kinds of croplands and settlements. Of the 278 natural and semi-natural classes, 9 were not represented in global protected areas with a strict biodiversity conservation management objective (IUCN management categories I-IV), and an additional 206 were less than 8.5% protected (half way to the 17% Aichi Target 11 goal). Forty four classes were between 8.5% and 17% protected (more than half way towards the Aichi 17% target), and only 19 classes exceeded the 17% Aichi target. However, when all protected areas (IUCN management categories I-VI plus protected areas with no IUCN designation) were included in a separate global gap analysis, representation of ecosystems increases substantially, with a third of the ecosystems exceeding the 17% Aichi target, and another third between 8.5% and 17%. The overall protection (representation) of global ecosystems in protected areas is considerably less when assessed using only strictly conserved protected areas, and more if all protected areas are included in the analysis. Protected area effectiveness should be included in further evaluations of global ecosystem protection. The ecosystems with the highest representation in protected areas were often bare or sparsely vegetated and found in inhospitable environments (e.g. cold mountains, deserts), and the eight most protected ecosystems were all snow and ice ecosystems. In addition to the global gap analysis of World Ecosystems in protected areas, we report on the representation results for the ecosystems in each biogeographic realm (Neotropical, Nearctic, Afrotropical, Palearctic, Indomalayan, Australasian, and Oceania).

Global Ecology and Conservation

Ecological resilience indicators for salt marsh ecosystems

Salt marshes are coastal ecosystems within the intertidal zone, characterized by hypoxic, saline, soil conditions and low biodiversity. Low diversity arises from frequent disturbance and stressful conditions (i.e., high salinity and hypoxia), where vegetative reproduction and low competition result in mostly monotypic stands, with some differences in plant community influenced by flooding regime (described below). While there are several types of salt marshes in the Northern Gulf of Mexico (NGoM), ranging from low to high salt marshes and salt flats (Tiner, 2013), Spartina alterniflora–dominated salt marshes in the Coastal and Marine Ecological Classification Standard (CMECS) Low and Intermediate Salt Marsh Biotic Group (FGDC, 2012) are the most extensive and are the focus of this project. These salt marshes are classified as “Gulf Coast Cordgrass Salt Marsh” (CEGL004190; USNVC, 2016). Within the NGoM region, some salt marsh areas are dominated by other species such as Spartina patens and Juncus roemerianus, which both occupy higher elevations in high-precipitation zones (e.g., Louisiana, Alabama, Mississippi, and Florida). In lower precipitation regions (southern Texas), hypersaline conditions often develop yielding communities of succulent salt marsh plants (Batis and Salicornia spp.). In climatic zones with warmer winter temperatures, temperate salt marshes naturally transition to mangrove (generally in the southern Gulf of Mexico range) or, in areas with lower precipitation, to salt flats (generally in western part of the study area).

Gulf of Mexico

Fishing for conservation of freshwater tropical fish in the Anthropocene

1. Biodiversity and fisheries are two important assets of freshwater ecosystems that are currently at risk from external threats. Establishing an equitable resolution to these threats is a major challenge of the Anthropocene. 2. This is particularly pertinent in developing nations where hotspots for biodiversity converge with rapid, and often environmentally degrading, economic development, and high dependency on aquatic biota and fisheries by local communities. 3. Here, we present global case studies that demonstrate how building upon a shared need for healthy environments and ecological integrity can meet both biodiversity conservation and fishery objectives. 4. These case studies provide evidence that addressing biodiversity conservation needs is possible through partnerships (especially with fishers), shared knowledge, and innovation in fisheries management. 5. In the pursuit of sustainable use of fresh water in development, both conservation and fisheries agendas are better served if efforts focused on synergising fishing activities with local ecosystem functioning and yield long-term livelihood and food security perspectives. 6. A partnership between conservationists (e.g., practitioners, environmental NGOs) and fisheries communities provides a unified voice advocating for biodiversity and social interests in freshwater governance decisions, which has more socio-economic and political capital than when voices are independent or in competition.

Aquatic Conservation: Marine and Freshwater Ecosys

Fishing out marine parasites? Impacts of fishing on rates of parasitism in the ocean

Among anthropogenic effects on the ocean, fishing is one of the most pervasive and extends deepest into the past. Because fishing reduces the density of fish (reducing transmission efficiency of directly transmitted parasites), selectively removes large fish (which tend to carry more parasites than small fish), and reduces food web complexity (reducing transmission efficiency of trophically transmitted parasites), the removal of fish from the world’s oceans over the course of hundreds of years may be driving a long-term, global decline in fish parasites. There has been growing recognition in recent years that parasites are a critical part of biodiversity and that their loss could substantially alter ecosystem function. Such a loss may be among the last major ecological effects of industrial fishing to be recognized by scientists.

Ecology Letters

Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina)

Currents are unique drivers of oceanic phylogeography and thus determine the distribution of marine coastal species, along with past glaciations and sea-level changes. Here we reconstruct the worldwide colonization history of eelgrass ( Zostera marina L.), the most widely distributed marine flowering plant or seagrass from its origin in the Northwest Pacific, based on nuclear and chloroplast genomes. We identified two divergent Pacific clades with evidence for admixture along the East Pacific coast. Two west-to-east (trans-Pacific) colonization events support the key role of the North Pacific Current. Time-calibrated nuclear and chloroplast phylogenies yielded concordant estimates of the arrival of Z. marina in the Atlantic through the Canadian Arctic, suggesting that eelgrass-based ecosystems, hotspots of biodiversity and carbon sequestration, have only been present there for ~243 ky (thousand years). Mediterranean populations were founded ~44 kya, while extant distributions along western and eastern Atlantic shores were founded at the end of the Last Glacial Maximum (~19 kya), with at least one major refuge being the North Carolina region. The recent colonization and five- to sevenfold lower genomic diversity of the Atlantic compared to the Pacific populations raises concern and opportunity about how Atlantic eelgrass might respond to rapidly warming coastal oceans.

Nature Plants

Trip report: pilot study of factors linking watershed function and coastal ecosystem health in American Samoa

Coral reef resources in the territory of American Samoa face significant problems from overfishing, non-point source pollution, global warming, and continuing population growth and development. The islands are still relatively isolated relative to other parts of the Pacific and have managed to avoid some of the more devastating invasive species that have reached other archipelagoes. As a result, there are opportunities for collaborative and integrative research and monitoring programs to help restore and maintain biodiversity and functioning natural ecosystem in the archipelago. We found that the “Ridge to Reef” paradigm already exists in American Samoa, with a high degree of interagency cooperation and efficient use of limited resources already taking place in the Territory. USGS may be able to make contributions as a partner organization in the Coral Reef Advisory Group (CRAG) through deployment of sediment monitoring instrumentation to supplement stream monitoring by the American Samoa Environmental Protection Agency, by providing high resolution vegetation and land-use maps of main islands, by providing additional support to the American Samoa Department of Marine and Wildlife Resources and the National Park Service for monitoring of invasive species, by working with members of CRAG to initiate sediment transport studies on Samoan reefs, and by developing new projects on the effects of bacterial contamination and pollutants on coral reef physiology and demography.

Open-File Report

Speaking the same language: Can the Sustainable Development Goals translate the needs of inland fisheries into irrigation decisions?

Irrigated agriculture and inland fisheries both make important contributions to food security, nutrition, livelihoods, and well-being. Typically, in modern irrigation systems, these components operate independently. Some practices, commonly associated with water use and intensification of crop production, can be in direct conflict with and have adverse impacts on fisheries. Food security objectives may be compromised if fish are not considered in the design phases of irrigation systems. The 2030 Agenda for Sustainable Development provides a framework that can serve as a backdrop to help integrate both sectors in policy discussions and optimize their contributions to achieving the Sustainable Development Goals (SDGs). Inland fisheries systems do play an important role in supporting many SDG objectives, but these contributions can sometimes be at odds with irrigated agriculture. Using case studies of two globally important river catchments, the Lower Mekong and Murray-Darling Basins, we highlight the conflicts and opportunities for improved outcomes between irrigated agriculture and inland fisheries. We explore SDG 2 (Zero Hunger) as a path to advance our irrigation systems as a means to benefit both agriculture and inland fisheries, preserving biodiversity and enhancing the economic, environmental, and social benefits they both provide to people.

Marine and Freshwater Research

Breeding loggerhead marine turtles Caretta caretta in Dry Tortugas National Park, USA, show high fidelity to diverse habitats near nesting beaches

We used satellite telemetry to identify in-water habitat used by individuals in the smallest North-west Atlantic subpopulation of adult nesting loggerhead turtles Caretta caretta during the breeding season. During 2010, 2011 and 2012 breeding periods, a total of 20 adult females used habitats proximal to nesting beaches with various levels of protection within Dry Tortugas National Park. We then used a rapid, high-resolution, digital imaging system to map habitat adjacent to nesting beaches, revealing the diversity and distribution of available benthic cover. Turtle behaviour showing measurable site-fidelity to these diverse habitats has implications for managing protected areas and human activities within them. Protecting diverse benthic areas adjacent to loggerhead turtle nesting beaches here and elsewhere could provide benefits for overall biodiversity conservation.

Florida

The social, economic, and environmental importance of inland fish and fisheries

Though reported capture fisheries are dominated by marine production, inland fish and fisheries make substantial contributions to meeting the challenges faced by individuals, society, and the environment in a changing global landscape. Inland capture fisheries and aquaculture contribute over 40% to the world’s reported finfish production from less than 0.01% of the total volume of water on earth. These fisheries provide food for billions and livelihoods for millions of people worldwide. Herein, using supporting evidence from the literature, we review 10 reasons why inland fish and fisheries are important to the individual (food security, economic security, empowerment), to society (cultural services, recreational services, human health and well-being, knowledge transfer and capacity building), and to the environment (ecosystem function and biodiversity, as aquatic “canaries”, the “green food” movement). However, the current limitations to valuing the services provided by inland fish and fisheries make comparison with other water resource users extremely difficult. This list can serve to demonstrate the importance of inland fish and fisheries, a necessary first step to better incorporating them into agriculture, land-use, and water resource planning, where they are currently often underappreciated or ignored.

Environmental Reviews

Twenty-five essential research questions to inform the protection and restoration of freshwater biodiversity

Freshwater biodiversity is declining at an unprecedented rate. Freshwater conservationists and environmental managers have enough evidence to demonstrate that action must not be delayed but have insufficient evidence to identify those actions that will be most effective in reversing the current trend. Here, the focus is on identifying essential research topics that, if addressed, will contribute directly to restoring freshwater biodiversity through supporting ‘bending the curve’ actions (i.e. those actions leading to the recovery of freshwater biodiversity, not simply deceleration of the current downward trend). The global freshwater research and management community was asked to identify unanswered research questions that could address knowledge gaps and barriers associated with ‘bending the curve’ actions. The resulting list was refined into six themes and 25 questions. Although context-dependent and potentially limited in global reach, six overarching themes were identified: (i) learning from successes and failures; (ii) improving current practices; (iii) balancing resource needs; (iv) rethinking built environments; (v) reforming policy and investments; and (vi) enabling transformative change. Bold, efficient, science-based actions are necessary to reverse biodiversity loss. We believe that conservation actions will be most effective when supported by sound evidence, and that research and action must complement one another. These questions are intended to guide global freshwater researchers and conservation practitioners, identify key projects and signal research needs to funders and governments. Our questions can act as springboards for multidisciplinary and multisectoral collaborations that will improve the management and restoration of freshwater biodiversity.

Aquatic Conservation: Marine and Freshwater Ecosys

Comparative biogeochemistry-ecosystem-human interactions on dynamic continental margins

The ocean’s continental margins face strong and rapid change, forced by a combination of direct human activity, anthropogenic CO 2 -induced climate change, and natural variability. Stimulated by discussions in Goa, India at the IMBER IMBIZO III, we (1) provide an overview of the drivers of biogeochemical variation and change on margins, (2) compare temporal trends in hydrographic and biogeochemical data across different margins (3) review ecosystem responses to these changes, (4) highlight the importance of margin time series for detecting and attributing change and (5) examine societal responses to changing margin biogeochemistry and ecosystems. We synthesize information over a wide range of margin settings in order to identify the commonalities and distinctions among continental margin ecosystems. Key drivers of biogeochemical variation include long-term climate cycles, CO 2 -induced warming, acidification, and deoxygenation, as well as sea level rise, eutrophication, hydrologic and water cycle alteration, changing land use, fishing, and species invasion. Ecosystem responses are complex and impact major margin services including primary production, fisheries production, nutrient cycling, shoreline protection, chemical buffering, and biodiversity. Despite regional differences, the societal consequences of these changes are unarguably large and mandate coherent actions to reduce, mitigate and adapt to multiple stressors on continental margins.

Journal of Marine Systems