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At least 109 records · Page 6Linked to original sources
USGS2003

Exopolymer microenvironments of microbial flora: Multiple and interactive effects on trophic relationships

Microbial cells in natural environments are often encased in different types of exopolymer secretions (EPS), ranging from tight capsules surrounding individual cells to the looser slime matrices of biofilms. The different physical and chemical properties of exopolymers could have secondary effects on trophic interactions between microbial cells and consumer animals. Laboratory studies showed that capsule EPS is significantly less digestible to consumers than slime EPS, even when extracted from the same bacterial strain. Bacterial cells with EPS capsules are less efficiently digested than noncapsuled cells, suggesting that capsules protect against digestion. Follow-up experiments determined that polysaccharide-rich fractions of slime EPS are absorbed with very high efficiencies while protein portions, which are more abundant in capsular polymers, are absorbed relatively poorly. Another series of experiments showed that dissolved organic matter (DOM), when adsorbed directly to the mineralogical portions of sediment particles, is available to deposit feeders. However, the further presence of an exopolymer coating on sediments more than doubled the bioavailability of adsorbed DOM to the consumer. Observations using cold-stage scanning electron microscopy indicated that exopolymer microenvironments are a common feature of natural marine sediments. Microbial exopolymers range from easily digestible carbon sources to relatively refractory ones that effectively protect some microbial cells from consumer digestion. Exopolymer microenvironments may also make recently adsorbed DOM highly accessible to particle-ingesting animals.

Limnology and Oceanography↗
USGS1986

Quantitative and qualitative studies of gut flora in striped bass from estuarine and coastal marine environments

Examination of the intestinal contents of 130 striped bass ( Morone saxatilis ) collected from the Hudson River and Long Island Sound during May to October 1981 showed that opportunistic fish pathogens—especially Aeromonas hydrophila —predominated in samples from both locations. Other isolates from both groups of striped bass included Vibrio , pseudomonads, flavobacteria, Alcaligenes , and enterics. Small numbers of Micrococcus , Bacillus , Corynebacterium , and Acinetobacter were also isolated. Total numbers of bacteria in the intestines were 100 to 1,000 times higher in striped bass from the Hudson River than in those from Long Island Sound.

Journal of Wildlife Diseases↗
USGS2007

Design and implementation of estimation-based monitoring programs for flora and fauna: A case study on the Cherokee National Forest

Science-based monitoring of biological resources is important for a greater understanding of ecological systems and for assessment of the target population using theoretic-based management approaches. When selecting variables to monitor, managers first need to carefully consider their objectives, the geographic and temporal scale at which they will operate, and the effort needed to implement the program. Generally, monitoring can be divided into two categories: index and inferential. Although index monitoring is usually easier to implement, analysis of index data requires strong assumptions about consistency in detection rates over time and space, and parameters are often biasednot accounting for detectability and spatial variation. In most cases, individuals are not always available for detection during sampling periods, and the entire area of interest cannot be sampled. Conversely, inferential monitoring is more rigorous because it is based on nearly unbiased estimators of spatial distribution. Thus, we recommend that detectability and spatial variation be considered for all monitoring programs that intend to make inferences about the target population or the area of interest. Application of these techniques is especially important for the monitoring of Threatened and Endangered (T&E) species because it is critical to determine if population size is increasing or decreasing with some level of certainty. Use of estimation-based methods and probability sampling will reduce many of the biases inherently associated with index data and provide meaningful information with respect to changes that occur in target populations. We incorporated inferential monitoring into protocols for T&E species spanning a wide range of taxa on the Cherokee National Forest in the Southern Appalachian Mountains. We review the various approaches employed for different taxa and discuss design issues, sampling strategies, data analysis, and the details of estimating detectability using site occupancy. These techniques provide a science-based approach for monitoring and can be of value to all resource managers responsible for management of T&E species.

Proceedings of the Annual Conference of the Southe↗
USGS2013

Changes to oak woodland stand structure and ground flora composition caused by thinning and burning

Our objective was to quantify the cumulative effects of prescribed burning and thinning on forest stocking and species composition at a woodland restoration experiment site in the Ozark Highlands of Missouri. Our study used four treatments (burn, harvest, harvest and burn, control) on three slope position and aspect combinations (south, north, ridge) replicated in three complete blocks. Harvested stands were thinned from below to 40 percent residual stocking. Two prescribed fires were applied to both burn and harvest-burn treatment units in a 5-year period. Results reflect changes that have taken place over a 6-year period, from pretreatment conditions to 1 year after the last fire. In this period, there was a 10-percent reduction in the stocking in burned stands compared to control and a 6-percent reduction in harvested and burned stands compared to harvested stands. Compared to the control, percentage ground cover of woodland indicators was seven times greater in burned stands, six times greater in harvested stands, and 22 percent greater in harvested and burned stands. Th ere was no significant (P > 0.05) interaction between aspect and treatment on stocking or ground flora cover. Th is study indicated that silvicultural treatments do achieve various goals that are common to managers who aim to restore woodland communities.

Missouri↗
USGS2012

Holocene diatom flora and climate history of Medicine Lake, Northern California, USA

A 226-cm-long sediment core spanning the past ~ 11,400 years was recovered from Medicine Lake, on the Modoc Plateau in northeastern California. Diatom assemblages provide a record of lake level that is driven by local and regional climate changes and changes in basin morphology due to the activity of Medicine Lake volcano. The diatom record indicates that throughout its history, Medicine Lake was an oligotrophic lake, dominated by Cyclotella stelligera and C. pseudostelligera . Variations in lake level are suggested by changes in the structure of the diatom assemblages. The lowest part of the core (11,400 to 10,300 cal yr B.P.) contains the transition from glacial to interglacial conditions. From about 11,000 to 5500 cal yr B.P., the lake filled two small, steep-sided basins or one basin with two steep-sided sub-basins connected by a shallow shelf. During this time, the diatom evidence (Cyclotella/Navicula ratio) indicates that effective moisture increased, leading to a deeper lake. Over the past 5500 years the diatom record indicates fluctuations in lake level. The change in lake level pattern from one of increasing depth prior to about 5500 cal yr B.P. to one of variable depths may be related to changes in the morphology of the Medicine Lake basin in addition to shifts in local and regional climate. During this latter period the Cyclotella/Navicula ratio varies, suggesting that the level of the lake fluctuated, resulting in changes in colonizable shelf area.

California↗
USGS2010

Cyclic changes in Pennsylvanian paleoclimate and effects on floristic dynamics in tropical Pangaea

Wetland floras narrowly define perceptions of Pennsylvanian tropical ecosystems, the so-called Coal Age. Such wetlands reflect humid to perhumid climate, leading to characterizations of Pennsylvanian tropics as everwet, swampy. These views are biased by the high preservation potential of wetlands. Sedimentation patterns, paleosols, and fossil floras indicate the presence of vegetation tolerant of subhumid to dry-subhumid, perhaps semi-arid climate in basins between peat formation times. Understanding the significance of this seasonally-dry vegetation has suffered from conceptual and terminological confusion. A clearer view has emerged as models for framing the data have improved. Basinal floras typical of seasonally-dry conditions, relatively low soil moisture regimes, are well documented but mainly from isolated deposits. Some of the earliest, dominated by primitive pteridosperms ("Fl??zfern" floras), occur in clastic rocks between European Early Pennsylvanian coal beds. Later Early Pennsylvanian, fern-cordaitalean vegetation, different from coal floras, is preserved in marine goniatite bullions. Conifers are first suggested by late Mississippian Potoniesporites pollen. About the same time, in North America, broadleaf foliage, Lesleya and Megalopteris occur in basin-margin settings, on drought-prone limestone substrates. The best known, xeromorphic floras found between coal beds appear in the Middle through Late Pennsylvanian, containing conifers, cordaitaleans, and pteridosperms. The Middle Pennsylvanian appearances of this flora are mainly allochthonous, though parautochthonous occurrences have been reported. Parautochthonous assemblages are mostly Late Pennsylvanian. The conifer flora became dominant in western and central Pangaean equatorial lowlands in earliest Permian. Location of the humid-perhumid wetland flora during periods of relative dryness, though rarely discussed, is as, or more, perplexing than the spatial location of seasonally-dry floras through time - wetland plants had few migratory options and possibly survived in small refugia, within and outside of basins. Coupled oscillations in climate, sea level, and vegetation were driven most likely by glacial-interglacial fluctuations, perhaps controlled by orbital cyclicity. ?? 2010.

International Journal of Coal Geology↗