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At least 1,063 records · Page 59Linked to original sources

USGS2021

Hydraulic modeling at selected dam-removal and culvert-retrofit sites in the northeastern United States

Aquatic connectivity projects, such as removing dams and modifying culverts, have substantial benefits. The restoration of natural flow conditions improves water quality, sediment transport, aquatic and riparian habitat, and fish passage. These projects can also decrease hazards faced by communities by lowering water-surface elevations of flood waters and by removing the risk of dam breaches associated with aging or inadequate infrastructure. This report documents and provides results of one- and two-dimensional hydraulic models developed for selected rivers and streams in the northeastern United States where a dam was removed or a culvert was retrofitted. The models were developed for conditions before and after the dam removal or culvert modification. The discharges applied in the models included monthly discharges and flood discharges for the annual exceedance probabilities of 50, 20, 10, 4, 2, 1, 0.5, and 0.2 percent. This study, by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service, demonstrates the benefits resulting from dam removal and retrofitting undersized culverts in terms of decreased water-surface elevations during flooding and improved fish passage. The U.S. Army Corps of Engineers Hydrologic Engineering Center’s River Analysis System was used to model the sites in one- and two-dimensional hydraulics, and decreases in the 1-percent annual exceedance probability discharge water-surface elevation were found at all sites studied. The decreases in water-surface elevation at sites in which the impoundment was removed ranged from 1.3 to 10.4 feet. One site, Bradford Dam in Westerly, Rhode Island, had only a 0.2-foot decrease, but at that site the dam was replaced by a series of weirs to retain the upstream impoundment and allow fish passage. Minimal differences were found between the water-surface elevations computed by the one- and two-dimensional models. The two-dimensional models, however, provide the additional benefit of detailed velocity and depth data throughout the channel at a resolution not possible with a one-dimensional model. These velocity and depth data allowed for assessment of the suitability for fish passage at the sites. Fish passage was improved at all the sites by removing the dams and retrofitting the culvert. Prolonged swim velocity criteria for selected fish species were maintained throughout three of the nine study sites, and burst swim velocity criteria were met at all study sites.

Connecticut, Massachusetts, New Jersey, Rhode Isla↗

USGS2008

The ShakeOut Earthquake Scenario— A story that southern Californians are writing

The question is not if but when southern California will be hit by a major earthquake - one so damaging that it will permanently change lives and livelihoods in the region. How severe the changes will be depends on the actions that individuals, schools, businesses, organizations, communities, and governments take to get ready. To help prepare for this event, scientists of the U.S. Geological Survey (USGS) have changed the way that earthquake scenarios are done, uniting a multidisciplinary team that spans an unprecedented number of specialties. The team includes the California Geological Survey, Southern California Earthquake Center, and nearly 200 other partners in government, academia, emergency response, and industry, working to understand the long-term impacts of an enormous earthquake on the complicated social and economic interactions that sustain southern California society. This project, the ShakeOut Scenario, has applied the best current scientific understanding to identify what can be done now to avoid an earthquake catastrophe. More information on the science behind this project will be available in The ShakeOut Scenario (USGS Open-File Report 2008-1150; http://pubs.usgs.gov/of/2008/1150/). The 'what if?' earthquake modeled in the ShakeOut Scenario is a magnitude 7.8 on the southern San Andreas Fault. Geologists selected the details of this hypothetical earthquake by considering the amount of stored strain on that part of the fault with the greatest risk of imminent rupture. From this, seismologists and computer scientists modeled the ground shaking that would occur in this earthquake. Engineers and other professionals used the shaking to produce a realistic picture of this earthquake's damage to buildings, roads, pipelines, and other infrastructure. From these damages, social scientists projected casualties, emergency response, and the impact of the scenario earthquake on southern California's economy and society. The earthquake, its damages, and resulting losses are one realistic outcome, deliberately not a worst-case scenario, rather one worth preparing for and mitigating against. Decades of improving the life-safety requirements in building codes have greatly reduced the risk of death in earthquakes, yet southern California's economic and social systems are still vulnerable to large-scale disruptions. Because of this, the ShakeOut Scenario earthquake would dramatically alter the nature of the southern California community. Fortunately, steps can be taken now that can change that outcome and repay any costs many times over. The ShakeOut Scenario is the first public product of the USGS Multi-Hazards Demonstration Project, created to show how hazards science can increase a community's resiliency to natural disasters through improved planning, mitigation, and response.

California↗

USGS2024

Carbon dioxide toxicity to zebra mussels (Dreissena polymorpha) is dependent on water chemistry

Carbon dioxide (CO 2 ) is gaining interest as a tool to combat aquatic invasive species, including zebra mussels ( Dreissena polymorpha ). However, the effects of water chemistry on CO 2 efficacy are not well described. We conducted five trials in which we exposed adult zebra mussels to a range of CO 2 in water with adjusted total hardness and specific conductance. We compared dose–responses and found differences in lethal concentration to 50% of organisms (LC50) estimates ranging from 108.3 to 179.3 mg/L CO 2 and lethal concentration to 90% of organisms (LC90) estimates ranging from 163.7 to 216.6 mg/L CO 2 . We modeled LC50 and LC90 estimates with measured water chemistry variables from the trials. We found sodium (Na + ) concentration to have the strongest correlation to changes in the LC50 and specific conductance to have the strongest correlation to changes in the LC90. Our results identify water chemistry as an important factor in considering efficacious CO 2 concentrations for zebra mussel control. Additional research into the physiological responses of zebra mussels exposed to CO 2 may be warranted to further explain mode of action and reported selectivity. Further study could likely develop a robust and relevant model to refine CO 2 applications for a wider range of water chemistries. Environ Toxicol Chem 2024;00:1–8. Published 2024. This article is a U.S. Government work and is in the public domain in the USA. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.

Environmental Toxicology and Chemistry↗

USGS2024

The interplay of future solar energy, land cover change, and their projected impacts on natural lands and croplands in the US

Projections for deep decarbonization require large amounts of solar energy, which may compete with other land uses such as agriculture, urbanization, and conservation of natural lands. Existing capacity expansion models do not integrate land use land cover change (LULC) dynamics into projections. We explored the interaction between projected LULC, solar photovoltaic (PV) deployment, and solar impacts on natural lands and croplands by integrating projections of LULC with a model that can project future deployment of solar PV with high spatial resolution for the conterminous United States. We used scenarios of LULC projections from the Intergovernmental Panel on Climate Change Special Report on Emission Scenarios from 2010 to 2050 and two electricity grid scenarios to model future PV deployment and compared those results against a baseline that held 2010 land cover constant through 2050. Though solar PV's overall technical potential was minimally impacted by LULC scenarios, deployed PV varied by −16.5 to 11.6 % in 2050 from the baseline scenario. Total land requirements for projected PV were similar to other studies, but measures of PV impacts on natural systems depended on the underlying land change dynamics occurring in a scenario. The solar PV deployed through 2050 resulted in 1.1 %–2.4 % of croplands and 0.3 %–0.7 % of natural lands being converted to PV. However, the deepest understanding of PV impacts and interactions with land cover emerged when the complete net gains and losses from all land cover change dynamics, including PV, were integrated. For example, one of the four LULC projections allows for high solar development and a net gain in natural lands, even though PV drives a larger percentage of natural land conversion. This paper shows that integrating land cover change dynamics with energy expansion models generates new insights into trade offs between decarbonization, impacts of renewables, and ongoing land cover change.

conterminous United States↗

USGS2015

An integrated approach to modeling changes in land use, land cover, and disturbance and their impact on ecosystem carbon dynamics: a case study in the Sierra Nevada Mountains of California

Increased land-use intensity (e.g. clearing of forests for cultivation, urbanization), often results in the loss of ecosystem carbon storage, while changes in productivity resulting from climate change may either help offset or exacerbate losses. However, there are large uncertainties in how land and climate systems will evolve and interact to shape future ecosystem carbon dynamics. To address this we developed the Land Use and Carbon Scenario Simulator (LUCAS) to track changes in land use, land cover, land management, and disturbance, and their impact on ecosystem carbon storage and flux within a scenario-based framework. We have combined a state-and-transition simulation model (STSM) of land change with a stock and flow model of carbon dynamics. Land-change projections downscaled from the Intergovernmental Panel on Climate Change’s (IPCC) Special Report on Emission Scenarios (SRES) were used to drive changes within the STSM, while the Integrated Biosphere Simulator (IBIS) ecosystem model was used to derive input parameters for the carbon stock and flow model. The model was applied to the Sierra Nevada Mountains ecoregion in California, USA, a region prone to large wildfires and a forestry sector projected to intensify over the next century. Three scenario simulations were conducted, including a calibration scenario, a climate-change scenario, and an integrated climate- and land-change scenario. Based on results from the calibration scenario, the LUCAS age-structured carbon accounting model was able to accurately reproduce results obtained from the process-based biogeochemical model. Under the climate-only scenario, the ecoregion was projected to be a reliable net sink of carbon, however, when land use and disturbance were introduced, the ecoregion switched to become a net source. This research demonstrates how an integrated approach to carbon accounting can be used to evaluate various drivers of ecosystem carbon change in a robust, yet transparent modeling environment.

California↗

USGS2015

Data Collection and Simulation of Ecological Habitat and Recreational Habitat in the Shenandoah River, Virginia

This report presents updates to methods, describes additional data collected, documents modeling results, and discusses implications from an updated habitat-flow model that can be used to predict ecological habitat for fish and recreational habitat for canoeing on the main stem Shenandoah River in Virginia. Given a 76-percent increase in population predictions for 2040 over 1995 records, increased water-withdrawal scenarios were evaluated to determine the effects on habitat and recreation in the Shenandoah River. Projected water demands for 2040 vary by watershed: the North Fork Shenandoah River shows a 55.9-percent increase, the South Fork Shenandoah River shows a 46.5-percent increase, and the main stem Shenandoah River shows a 52-percent increase; most localities are projected to approach the total permitted surface-water and groundwater withdrawals values by 2040, and a few localities are projected to exceed these values. The habitat model used for this study evaluates the suitability of ecological habitat, represented by fish, and recreational habitat, represented by canoeing, based on depth, velocity, and substrate conditions, which are weighted for the physical habitat types (riffles, runs, or pools) present within a stretch of river. Weighted usable-habitat area in the Lockes Mill reach was maximized for adult smallmouth bass and sub-adult smallmouth bass ( Micropterus dolomieu ) and river chub ( Nocomis micropogon ) when streamflows were equal to median flow (900 cubic feet per second) for summer months. Ecological maximum weighted usable-habitat areas for smaller fish, such as spotfin or satinfin shiner ( Cyprinella spp.), margined madtom ( Noturus insignis ), and juvenile redbreast sunfish ( Lepomis auritus ) occurred with 10 th percentile flows (482 cubic feet per second) and lower. Recreational weighted usable-habitat areas for canoeing were maximized when streamflows were above the 75 th percentile (1,410 cubic feet per second). During historic droughts, streamflows were less than the 10 th percentile, and adult smallmouth bass and sub-adult smallmouth bass habitat was below normal for the majority of days during at least 2 months of the summer. When streamflows were less than the lowest 7-day average in a 10-year period, or 7Q10 flow (357 cubic feet per second), margined madtom, river chub, and sub-adult redbreast sunfish habitat areas were below normal as well. Streamflows that limit most fish species habit availability range from 300 to 500 cubic feet per second. For the drought years simulated, flows that were equal to or less than the 10 th percentile for summer months did not provide adequate depth for canoe passage through riffle habitats. A modeling limitation for higher flows than those studied during development of the habitat-suitability criteria is that modeled habitat availability will decrease as flows increase. Time-series analyses were used to investigate changes in habitat availability with increased water withdrawals of 10, 20, and almost 50 percent (48.6 percent) up to the 2040 amounts projected by local water supply plans. Adult and sub-adult smallmouth bass frequently had habitat availability outside the normal range for habitat conditions during drought years, yet 10- or 20-percent increases in withdrawals did not contribute to a large reduction in habitat. When withdrawals were increased by 50 percent, there was an additional decrease in habitat. During 2002 drought scenarios, reduced habitat availability for sub-adult redbreast sunfish or river chub was only slightly evident with 50-percent increased withdrawal scenarios. Recreational habitat represented by canoeing decreased lower than normal during the 2002 drought. For a recent normal year, like 2012, increased water-withdrawal scenarios did not affect habitat availability for fish such as adult and sub-adult smallmouth bass, sub-adult redbreast sunfish, or river chub. Canoeing habitat availability was within the normal range most of 2012, and increased water-withdrawal scenarios showed almost no affect. For both ecological fish habitat and recreational canoeing habitat, the antecedent conditions (habitat within normal range of habitat or below normal) appear to govern whether additional water withdrawals will affect habitat availability. As human populations and water demands increase, many of the ecological or recreational stresses may be lessened by managing the timing of water withdrawals from the system.

Virginia↗

USGS2018

Geologic framework and hydrogeology of the Rio Rico and Nogales 7.5’ quadrangles, upper Santa Cruz Basin, Arizona, with three-dimensional hydrogeologic model

Rapid population growth and declining annual recharge to aquifers in the upper Santa Cruz Basin area of southern Arizona, have increased the demand for additional groundwater resources. This demand is predicted to escalate in the future because of higher temperatures, longer droughts, less aquifer recharge, and decreased river and stream base flow. We conducted geologic studies to help evaluate and better understand groundwater resources in the basin. Results of these studies are presented in this report, which summarizes the basin geologic framework and hydrogeology, and presents a threedimensional (3D) hydrogeologic model for the Rio Rico and Nogales 7.5′ quadrangles. Three major hydrogeologic units are displayed in the 3D model; a lower basement confining unit, consisting of Jurassic, Cretaceous, and Tertiary (Paleocene and Oligocene) rocks; a middle unit composed entirely of the Miocene Nogales Formation; and an upper unit consisting of late Miocene to Holocene surficial deposits. The Nogales Formation and the late Miocene to Holocene sediments are the main aquifers in the upper Santa Cruz Basin. The 3D model integrates the hydrogeologic units and faults to define the geometry, structure, and thickness of the aquifer system that provides water to Nogales and surrounding communities of southernmost Arizona. The report includes an EarthVision 3D Viewer, consisting of software enabling the user to view data interactively in 3D space to help explain the internal complexities of the basin geometry, structure, stratigraphy, and hydrology. The 3D model is a synthesis of geologic data from geologic maps, cross sections, and lithologic descriptions and interpretations; and geophysical data including gravity, magnetic data, and airborne electromagnetic data.

Arizona↗

USGS2003

Hydrogeology and Simulated Effects of Ground-Water Withdrawals in the Big River Area, Rhode Island

The Rhode Island Water Resources Board is considering expanded use of ground-water resources from the Big River area because increasing water demands in Rhode Island may exceed the capacity of current sources. This report describes the hydrology of the area and numerical simulation models that were used to examine effects of ground-water withdrawals during 1964?98 and to describe potential effects of different withdrawal scenarios in the area. The Big River study area covers 35.7 square miles (mi2) and includes three primary surface-water drainage basins?the Mishnock River Basin above Route 3, the Big River Basin, and the Carr River Basin, which is a tributary to the Big River. The principal aquifer (referred to as the surficial aquifer) in the study area, which is defined as the area of stratified deposits with a saturated thickness estimated to be 10 feet or greater, covers an area of 10.9 mi2. On average, an estimated 75 cubic feet per second (ft3/s) of water flows through the study area and about 70 ft3/s flows out of the area as streamflow in either the Big River (about 63 ft3/s) or the Mishnock River (about 7 ft3/s). Numerical simulation models are used to describe the hydrology of the area under simulated predevelopment conditions, conditions during 1964?98, and conditions that might occur in 14 hypothetical ground-water withdrawal scenarios with total ground-water withdrawal rates in the area that range from 2 to 11 million gallons per day. Streamflow depletion caused by these hypothetical ground-water withdrawals is calculated by comparison with simulated flows for the predevelopment conditions, which are identical to simulated conditions during the 1964?98 period but without withdrawals at public-supply wells and wastewater recharge. Interpretation of numerical simulation results indicates that the three basins in the study area are in fact a single ground-water resource. For example, the Carr River Basin above Capwell Mill Pond is naturally losing water to the Mishnock River Basin. Withdrawals in the Carr River Basin can deplete streamflows in the Mishnock River Basin. Withdrawals in the Mishnock River Basin deplete streamflows in the Big River Basin and can intercept water flowing to the Flat River Reservoir North of Hill Farm Road in Coventry, Rhode Island. Withdrawals in the Big River Basin can deplete streamflows in the western unnamed tributary to the Carr River, but do not deplete streamflows in the Mishnock River Basin or in the Carr River upstream of Capwell Mill Pond. Because withdrawals deplete streamflows in the study area, the total amount of ground water that may be withdrawn for public supply depends on the minimum allowable streamflow criterion that is applied for each basin.

Water-Resources Investigations Report↗

USGS1973

Water resources outlook for the Minneapolis-Saint Paul Metropolitan Area, Minnesota

The water resources were studied within an area whose natural ground-water flow is largely towards the center of the metropolitan area. This area coincides with the extent of the Hinckley Sandstone aquifer. Thus, the general geohydrology of the area bounded by the extent of the Hinckley Sandstone (about 6,000 square miles) as it relates to the hydrology of the Minneapolis-St. Paul metropolitan area is described. Greater emphasis is placed on the area underlain by the Prairie du Chien-Jordan aquifer (about 2,000 square miles), from which approximately 75 percent of the ground-water for the metropolitan area is pumped. The study indicates that the surface-water resources of the Twin Cities metropolitan area are used to such an extent that a supply adequate for domestic and industrial needs as well as power plant and sanitary effluent assimilation will not be available during severe drought. Ground-water is obtained primarily from two aquifer systems: The Prairie du Chien-Jordan and the Mount Simon-Hinckley. In 1970, these aquifers supplied about 90 percent (175 mgd) of the ground-water used in the metropolitan part of the study area. The probable level of development that can be sustained by these two aquifers in the metropolitan area is estimated to be 1,100 mgd; thus, substantial additional ground-water supplies could be developed. However, considerable management and planning would be needed to sustain this level of development. Maps in this report can be used to select general well-field locations based on consideration of 1) aquifer, 2) depth needed for completion, 3) head availability, 4) location of natural recharge and discharge boundaries, and 5) distance from areas where over-development of ground-water resources is imminent. Because of complexities in the ground-water system, yield estimates, boundary effects, and effects of aquifer interaction may best be determined in a study incorporating the use of a hydrologic model. Future detailed studies might include elaboration on some of the topics described in this report and the acquisition and interpretation of new data. Major items on which future work might focus are 1) data collection, 2) geohydrologic mapping, 3) hydraulic characteristics of subsurface geohydrologic units, 4) hydrology of lakes, and 5) hydrologic systems modeling

Minnesota↗

USGS1984

Compilation of data collected and derived for water years 1980 and 1981 for the purpose of water-quality modeling of the lower Ouachita River and selected tributaries, south-central Arkansas

This report represents water-quality, sediment oxygen demand, phytoplankton, periphyton, bacteria, instantaneous and mean-daily discharge, stream geometry, time of travel, reaeration data and other water quality collected on the lower Ouachita River (from just upstream of Little Missouri River to Lock and Dam 6), West Two Bayou, Smackover Creek, Haynes Creek and selected tributaries. The data were collected primarily between August 1980 and September 1981. Over 100 sites were sampled, but most were sampled only during two intensive sampling periods in mid-August of 1980 and mid-September of 1981. The water-quality data include measurements of pH, specific conductance, dissolved oxygen, water temperature, whole-water nitrogen species, total phosphorus, total orthophosphorus, dissolved chlorides, dissolved sulfate, ultimate biochemical oxygen demand and organic carbon. The phytoplankton and periphyton data include measurements of chlorophyll a and b, taxonomic identification cell counts and weights. Limited precipitation data are also included. Maps and schematic diagrams of the lower Ouachita River, West Two Bayou, Smackover Creek and Haynes Creek drainage systems show the location of the data-collection sites within the area. (USGS)

Open-File Report↗

USGS2025

Preliminary field report of landslide hazards following Hurricane Helene

Executive Summary This report reflects our knowledge regarding the widespread landslide activity associated with Hurricane Helene observed during the U.S. Geological Survey’s (USGS) mission assignment to North Carolina in October 2024. The material in this report was originally prepared for the Federal Emergency Management Agency under mission assignment DR-4827-NC. The data and commentary in this report are reflective of a report provided to the Federal Emergency Management Agency (FEMA) on October 18, 2024, as well as information provided in briefings at the Buncombe County Emergency Operations Center. The report has been modified for public dissemination. This assessment was based on systematic visual examination and mapping of landslide locations from aerial and satellite imagery, visual and photographic observations from low-level helicopter overflights and conversations with local landslide experts from the North Carolina Geological Survey and Appalachian Landslide Consultants PLLC, and more than 50 years of combined landslide hazard professional experience of the mission-assigned field team. No systematic field investigations were done by the USGS. While responding to the event, the USGS did not identify any landslides that posed an immediate major threat to recovery personnel in parts of nine counties in North Carolina (Avery, Buncombe, Henderson, McDowell, Mitchell, Polk, Rutherford, Watauga, and Yancey); however, threats from renewed landslide activity may remain heightened in localized areas for months or even years. Known areas of the most abundant landslide occurrence include Bat Cave, Lake Lure, Chimney Rock, Swannanoa, Black Mountain, Fairview, steep areas in Asheville, and the Blue Ridge Parkway. The USGS shared detailed locations of known landslides with the Emergency Operations Centers. The thousands of landslide scars on hillsides and landslide deposits on flatter ground may present some threat to recovery activities. Soil and rocks will continue to erode from newly exposed landslide scars and may pose a threat to people and infrastructure who are immediately nearby. In general, the steeper and taller the landslide scar, the greater the potential threat. This threat is heightened during periods of rainfall and increases with the duration and intensity of rainstorms. Very heavy rainfall, or repeated rainfall events during short periods, could also initiate new landslides on steep slopes. Excavation of landslide deposits, particularly excavation of those deposits directly adjacent to steep slopes, may also pose a threat to nearby people and equipment. An interagency collaborative mapping effort led by the USGS that informed this assessment identified 1,155 landslide locations by the October 2024 briefings, but that number increased to 2,217 in a final reviewed version of the locations published in January 2025. Locations were mapped from satellite imagery, fixed-wing and helicopter surveys, media and social media, and field reports in the 3 weeks following the passage of the remnants of Hurricane Helene. USGS products outlined in this report are publicly available and include geotagged photographs from aerial reconnaissance, hazard models, an interactive view of mapped landslide locations, and landslide safety and education resources.

North Carolina, South Carolina, Tennessee, Virgini↗

USGS2012

Streamflow depletion by wells--Understanding and managing the effects of groundwater pumping on streamflow

Groundwater is an important source of water for many human needs, including public supply, agriculture, and industry. With the development of any natural resource, however, adverse consequences may be associated with its use. One of the primary concerns related to the development of groundwater resources is the effect of groundwater pumping on streamflow. Groundwater and surface-water systems are connected, and groundwater discharge is often a substantial component of the total flow of a stream. Groundwater pumping reduces the amount of groundwater that flows to streams and, in some cases, can draw streamflow into the underlying groundwater system. Streamflow reductions (or depletions) caused by pumping have become an important water-resource management issue because of the negative impacts that reduced flows can have on aquatic ecosystems, the availability of surface water, and the quality and aesthetic value of streams and rivers. Scientific research over the past seven decades has made important contributions to the basic understanding of the processes and factors that affect streamflow depletion by wells. Moreover, advances in methods for simulating groundwater systems with computer models provide powerful tools for estimating the rates, locations, and timing of streamflow depletion in response to groundwater pumping and for evaluating alternative approaches for managing streamflow depletion. The primary objective of this report is to summarize these scientific insights and to describe the various field methods and modeling approaches that can be used to understand and manage streamflow depletion. A secondary objective is to highlight several misconceptions concerning streamflow depletion and to explain why these misconceptions are incorrect.

Circular↗

USGS2019

Reporting the limits of detection and quantification for environmental DNA assays

Background Environmental DNA (eDNA) analysis is increasingly being used to detect the presence and relative abundance of rare species, especially invasive or imperiled aquatic species. The rapid progress in the eDNA field has resulted in numerous studies impacting conservation and management actions. However, standardization of eDNA methods and reporting across the field is yet to be fully established, with one area being the calculation and interpretation of assay limit of detection (LOD) and limit of quantification (LOQ). Aims Here, we propose establishing consistent methods for determining and reporting of LOD and LOQ for single‐species quantitative PCR (qPCR) eDNA studies. Materials & Methods/ Results We utilize datasets from multiple cooperating laboratories to demonstrate both a discrete threshold approach and a curve‐fitting modeling approach for determining LODs and LOQs for eDNA qPCR assays. We also provide details of an R script developed and applied for the modeling method. Discussion/Conclusions Ultimately, standardization of how LOD and LOQ are determined, interpreted, and reported for eDNA assays will allow for more informed interpretation of assay results, more meaningful interlaboratory comparisons of experiments, and enhanced capacity for assessing the relative technical quality and performance of different eDNA qPCR assays.

Environmental DNA↗

USGS2009

Summary of Survival Data from Juvenile Coho Salmon in the Klamath River, Northern California, 2008

A study to estimate the effects of Iron Gate Dam discharge on ESA-listed juvenile coho salmon during their seaward migration to the ocean was begun in 2005. Estimates of survival through various reaches of river downstream from the dam were completed in 2006, 2007, and 2008 as part of this process. This report describes the estimates of survival during 2008, and is a complement to similar reports from 2006 and 2007. In each year, a series of models were evaluated to determine apparent survival and recapture probabilities of radio-tagged fish in several river reaches between Iron Gate Hatchery at river kilometer 309 and a site at river kilometer 33. These results indicate most trends in survival among reaches were similar to those from 2006 and 2007, but the magnitudes of the estimated survivals were lower in 2008. The differences in survivals from Iron Gate Hatchery to river kilometer 33 in 2006 (0.653 SE 0.039), 2007 (0.497 SE 0.044), and 2008 (0.406 SE 0.032) were caused primarily by differences in survival upstream from the Scott River. This report is intended as a brief description of the survivals estimated from the fish released in 2008 to be used by others interested in the data.

Open-File Report↗

USGS2007

MODFLOW-2005, The U.S. Geological Survey Modular Ground-Water Model - Documentation of the Multiple-Refined-Areas Capability of Local Grid Refinement (LGR) and the Boundary Flow and Head (BFH) Package

This report documents the addition of the multiple-refined-areas capability to shared node Local Grid Refinement (LGR) and Boundary Flow and Head (BFH) Package of MODFLOW-2005, the U.S. Geological Survey modular, three-dimensional, finite-difference ground-water flow model. LGR now provides the capability to simulate ground-water flow by using one or more block-shaped, higher resolution local grids (child model) within a coarser grid (parent model). LGR accomplishes this by iteratively coupling separate MODFLOW-2005 models such that heads and fluxes are balanced across the shared interfacing boundaries. The ability to have multiple, nonoverlapping areas of refinement is important in situations where there is more than one area of concern within a regional model. In this circumstance, LGR can be used to simulate these distinct areas with higher resolution grids. LGR can be used in two-and three-dimensional, steady-state and transient simulations and for simulations of confined and unconfined ground-water systems. The BFH Package can be used to simulate these situations by using either the parent or child models independently.

Techniques and Methods↗

USGS2009

Mineral Resource Assessment of Marine Sand Resources in Cape- and Ridge-Associated Marine Sand Deposits in Three Tracts, New York and New Jersey, United States Atlantic Continental Shelf

Demand is growing in the United States and worldwide for information about the geology of offshore continental shelf regions, the character of the seafloor, and sediments comprising the seafloor and subbottom. Interest in locating sand bodies or high quality deposits that have potential as sources for beach nourishment and ecosystem restoration is especially great in some regions of the country. The Atlantic coast, particularly New York and New Jersey, has been the focus of these studies for the past 40 years with widely varying results. This study is the first attempt at applying probability statistics to modeling Holocene-age cape-and ridge-associated sand deposits and thus focuses on distinct sand body morphology. This modeling technique may have application for other continental shelf regions that have similar geologic character and late Quaternary sea-level transgression history. An estimated volume of 3.9 billion m3 of marine sand resources is predicted in the cape-and ridge-associated marine sand deposits in three representative regions or tracts on the continental shelf offshore of New York and New Jersey. These estimates are taken from probabilistic distributions of sand resources and are produced using deposit models and Monte Carlo Simulation (MCS) techniques. The estimated sand resources presented here are for only three tracts as described below and for Holocene age sand resources contained in cape-and ridge-associated marine sand deposit types within this area. Other areas may qualify as tracts for this deposit type and other deposit types and geologic ages (for example, paleo-stream channels, blanket and outwash deposits, ebb-tide shoals, and lower sea level-stand deltas), which are present on the New Jersey and New York continental shelf area but are not delineated and modeled in this initial evaluation. Admittedly, only a portion of these probable sand resources will ultimately be available and suitable for production, dependent largely on geographic, economic, preemptive use, environmental, geologic and political factors. In addition, offshore sand resources should only be considered if the area is seaward of the active zone of significant nearshore sediment transport, about 10 to 12 m in depth, and in sufficiently shallow water so that sand can be extracted within U.S. dredging equipment limits, currently about 40 m in depth. If the material is to be used for beach nourishment, material must be of an appropriate sediment texture and character (grain size, sorting, shape, and color) to match the native beach and have mineralogical properties important to its use. Extraction of sand can disturb or alter the benthic habitat and seafloor ecology, so these factors and other site-specific effects will need to be evaluated for any intended use. These and other factors are not considered in this report but can be expected to reduce the total net volume of sand resources available for production. The purpose of this report is to describe and present results from a probabilistic mineral modeling technique previously applied to onshore mineral resources. This modeling and assessment procedure is being used for the first time to assess and estimate offshore aggregate resources; this study is part of the U.S. Geological Survey (USGS) Marine Aggregates Resources and Processes Project (http://woodshole.er.usgs.gov/project-pages/aggregates/).

Bulletin↗

USGS2015

Second Projet de Renforcement Institutionnel du Secteur Minier de la République Islamique de Mauritanie (PRISM-II) Phase V

In 1996, at the request of the Government of the Islamic Republic of Mauritania, a team of U.S. Geological Survey (USGS) scientists produced a strategic plan for the acquisition, improvement and modernization of multidisciplinary sets of data to support the growth of the Mauritanian minerals sector and to highlight the geological and mineral exploration potential of the country. In 1999, the Ministry of Petroleum, Energy, and Mines of the Islamic Republic of Mauritania implemented a program for the acquisition of the recommended basic geoscientific information, termed the first Projet de Renforcement Institutionnel du Secteur Minier (Project for Institutional Capacity Building in the Mining Sector, PRISM-I). As a result of the PRISM-I efforts, a great deal of new geological, geophysical, geochemical, remote sensing, and hydrological data became available for evaluation and synthesis. However, the Ministry of Petroleum, Energy, and Mines recognized that additional work was required to extract the full benefit of the data before it could be of greatest use to the international community and of benefit to the Mauritanian minerals and development sector. To achieve this benefit, the Ministry of Petroleum, Energy, and Mines implemented a second Projet de Renforcement Institutionnel du Secteur Minier (PRISM-II) in 2006 to consolidate, synthesize, and interpret all of the existing data, create a new 1:1,000,000 scale geologic map, and define the mineral resource potential of the country. A consortium in which the USGS was the lead scientific agency carried out the majority of the PRISM-II work. In 2008, the USGS Mauritania Minerals Project was interrupted due to political changes in Mauritania. PRISM-II work resumed in 2011, and was completed in 2013 with the delivery of over 40 separate written reports and plates, an access file containing the Mauritanian National Mineral Deposits Database, and an interactive GIS containing all of the multi-disciplinary data and interpretive areas of mineral resource potential in Mauritania. This report contains the USGS results of the PRISM-II Mauritania Minerals Project and is presented in cooperation with the Ministry of Petroleum, Energy, and Mines of the Islamic Republic of Mauritania. The Report is composed of separate chapters consisting of multidisciplinary interpretive reports with accompanying plates on the geology, structure, geochronology, geophysics, hydrogeology, geochemistry, remote sensing (Landsat TM and ASTER), and SRTM and ASTER digital elevation models of Mauritania. The syntheses of these multidisciplinary data formed the basis for additional chapters containing interpretive reports on 12 different commodities and deposit types known to occur in Mauritania, accompanied by countrywide mineral resource potential maps of each commodity/deposit type. The commodities and deposit types represented include: (1) Ni, Cu, PGE, and Cr deposits hosted in ultramafic rocks; (2) orogenic, Carlin-like, and epithermal gold deposits; (3) polymetallic Pb-Zn-Cu vein deposits; (4) sediment-hosted Pb-Zn-Ag deposits of the SEDEX and Mississippi Valley-type; (5) sediment-hosted copper deposits; ( 6) volcanogenic massive sulfide deposits; (7) iron oxide copper-gold deposits; (8) uranium deposits; (9) Algoma-, Superior-, and oolitic-type iron deposits; (10) shoreline Ti-Zr placer deposits; (11) incompatible element deposits hosted in pegmatites, alkaline rocks, and carbonatites, and; (12) industrial mineral deposits. Additional chapters include the Mauritanian National Mineral Deposits Database are accompanied by an explanatory text and the Mauritania Minerals Project GIS that contains all of the interpretive layers created by USGS scientists. Raw data not in the public domain may be obtained from the Ministry of Petroleum, Energy, and Mines in Nouakchott, Mauritania.

Open-File Report↗

USGS2015

Geologic map of Mauritania (phase V, deliverables 51a, 51b, and 51c)

Open-File Report↗