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At least 1,063 records · Page 59Linked to original sources
USGS2016

Survival and metamorphosis of larval sea lamprey (Petromyzon marinus) residing in Lakes Michigan and Huron near river mouths

Although population demographics of larval lampreys in streams have been studied extensively, demographics in lake environments have not. Here, we estimated survival and rates of metamorphosis for larval sea lamprey ( Petromyzon marinus ) populations residing in the Great Lakes near river mouths (hereafter termed lentic areas). Tagged larvae were stocked and a Bayesian multi-state tag-recovery model was used to investigate population parameters associated with tag recovery, including survival and metamorphosis probabilities. Compared to previous studies of larvae in streams, larval growth in lentic areas was substantially slower (Brody growth coefficient = 0.00132; estimate based on the recovery of six tagged larvae), survival was slightly greater (annual survival = 63%), and the length at which 50% of the larvae would be expected to metamorphose was substantially shorter (126 mm). Stochastic simulations were used to estimate the production of parasitic stage (juvenile) sea lamprey from a hypothetical population of larvae in a lentic environment. Production of juvenile sea lamprey was substantial because, even though larval growth in these environments was slow relative to stream environments, survival was high and length at metamorphosis was less. However, estimated production of juvenile sea lamprey was less for the lentic environment than for similar simulations for river environments where larvae grew faster. In circumstances where the cost to kill a larva with lampricide was equal and control funds are limited, sea lamprey control effort may be best directed toward larvae in streams with fast-growing larvae, because stream-produced larvae will most likely contribute to juvenile sea lamprey populations.

Lake Huron, Lake Michigan↗
USGS2012

A multi-disciplinary approach to the removal of emerging contaminants in municipal wastewater treatment plans in New York State, 2003-2004

Across the United States, there is a rapidly growing awareness of the occurrence and the toxicological impacts of natural and synthetic trace compounds in the environment. These trace compounds, referred to as emerging contaminants (ECs), are reported to cause a range of negative impacts in the environment, such as adverse effects on biota in receiving streams and interference with the normal functions of the endocrine system, which controls growth and development in living organisms. Wastewater treatment plants (WWTPs) have been identified as a key collection point for ECs in the water cycle and potentially an ideal location at which to treat to remove them, thereby mitigating their release into the environment ( Figure 1 ). This presents wastewater industry professionals with both a significant opportunity and a tremendous challenge: to identify cost effective treatment processes that can remove or reduce these contaminants before they are released into the environment. Although WWTPs have been identified as strategic focal points and potential treatment locations for the removal of ECs from the environment, little is known about the nature, variability, transport and fate of this class of compounds in typical wastewaters and treatment facilities in the United States. Furthermore few studies have been performed to monitor or understand the capability of conventional or innovative wastewater treatment processes to remove or reduce the concentrations of a wide variety of ECs at wastewater facilities. This study was designed to provide baseline information on this topic. While other studies have examined the occurrence of a limited number of representative contaminants in the environment (generally five to 10 compounds), this study is unique in that it provides information on a comprehensive list of ECs (63 ECs in total, Contaminant List in Appendix A, not included here) in the wastewater collection and treatment systems for four diverse communities over a two-year period. (It should be noted that the study is ongoing and additional data are pending but only 18 months of data are presented in this paper). The study was conducted in two phases. Phase 1 was designed to provide information concerning the general character and concentration of ECs commonly detected in wastewaters, the variability over a prolonged period of time, the transport and fate of ECs through typical wastewater treatment plants operating with a range of conventional technologies and the impact of WWTP discharges on receiving streams. It also provided guidance in understanding the capability of distinct wastewater treatment processes or technologies to reduce or remove ECs. The second phase of the study focused on one of the most common wastewater treatment processes operated in the United States, the Activated Sludge process. Using four controlled parallel activated sludge pilots, a more detailed assessment of the impact of Sludge Retention Time (SRT) on the reduction or removal of ECs was performed.

New York↗
USGS2015

Preserved filamentous microbial biosignatures in the Brick Flat gossan, Iron Mountain, California

A variety of actively precipitating mineral environments preserve morphological evidence of microbial biosignatures. One such environment with preserved microbial biosignatures is the oxidized portion of a massive sulfide deposit, or gossan, such as that at Iron Mountain, California. This gossan may serve as a mineralogical analogue to some ancient martian environments due to the presence of oxidized iron and sulfate species, and minerals that only form in acidic aqueous conditions, in both environments. Evaluating the potential biogenicity of cryptic textures in such martian gossans requires an understanding of how microbial textures form biosignatures on Earth. The iron-oxide-dominated composition and morphology of terrestrial, nonbranching filamentous microbial biosignatures may be distinctive of the underlying formation and preservation processes. The Iron Mountain gossan consists primarily of ferric oxide (hematite), hydrous ferric oxide (HFO, predominantly goethite), and jarosite group minerals, categorized into in situ gossan, and remobilized iron deposits. We interpret HFO filaments, found in both gossan types, as HFO-mineralized microbial filaments based in part on (1) the presence of preserved central filament lumina in smooth HFO mineral filaments that are likely molds of microbial filaments, (2) mineral filament formation in actively precipitating iron-oxide environments, (3) high degrees of mineral filament bending consistent with a flexible microbial filament template, and (4) the presence of bare microbial filaments on gossan rocks. Individual HFO filaments are below the resolution of the Mars Curiosity and Mars 2020 rover cameras, but sinuous filaments forming macroscopic matlike textures are resolvable. If present on Mars, available cameras may resolve these features identified as similar to terrestrial HFO filaments and allow subsequent evaluation for their biogenicity by synthesizing geochemical, mineralogical, and morphological analyses. Sinuous biogenic filaments could be preserved on Mars in an iron-rich environment analogous to Iron Mountain, with the Pahrump Hills region and Hematite Ridge in Gale Crater astentative possibilities.

California↗
USGS1985

Near-infrared spectra of West Shasta gossans compared with true and false gossans from Australia and Saudi Arabia

The near-infrared spectra of a suite of outcrop samples of massive sulfide gossans and false gossans representing three different weathering environments were measured and studied with X-ray, scanning electron microscope, and energy dispersive X-ray. Gossans that formed in a humid tropical environment are represented by samples from the Mt. Isa area, Queensland, Australia, and gossans that formed in an arid environment are represented by samples from several locations in Saudi Arabia. The gossans of the West Shasta massive sulfide district in California represent a weathering environment intermediate between these two extremes.On the basis of these spectral measurements, true gossans after massive sulfide deposits have spectra in the 800 to 2,500 nanometer (nm) region that are distinctly different from the spectra of false gossans. In the humid tropical environment, highly leached, newly formed kaolin minerals in the gossan cause spectral differences at about 1,400 to 2,200 nm. In the arid environment, true gossans preserve talc and minor mica from the massive sulfide deposit; these minerals are not observed in false gossans. These minerals result in spectral differences in the 2,200- to 2,300-nm region. In addition, true gossans generally have goethite spectral bands at about 900 nm as opposed to hematite spectral bands at about 850 nm for the false gossans.False gossans are not known in the West Shasta district; however, the gossan at the largest deposit, Iron Mountain, is a true gossan that has the distinctive spectral features of goethite at about 900 nm and diaspore in the 1,400- to 2,500-nm region. The other gossans also have the spectral features of goethite, but they contain a less leached mixture of kaolinite plus illite and have distinctive spectral features in the 1,400- to 2,500-nm region. These spectral differences define two groups of West Shasta gossans--inner gossans in large deposits and outer gossans at the margins of large deposits and in lesser massive sulfide deposits.

Economic Geology↗
USGS1998

The ichnologic record of the continental invertebrate invasion; evolutionary trends in environmental expansion, ecospace utilization, and behavioral complexity

The combined study of continental trace fossils and associated sedimentary facies provides valuable evidence of colonization trends and events throughout the Phanerozoic. Colonization of continental environments was linked to the exploitation of empty or under-utilized ecospace. Although the nonmarine trace fossil record probably begins during the Late Ordovician, significant invasion of nonmarine biotopes began close to the Silurian-Devonian transition with the establishment of a mobile arthropod epifauna (Diplichnites ichnoguild) in coastal marine to alluvial plain settings. Additionally, the presence of vertical burrows in Devonian high-energy fluvial deposits reflects the establishment of a stationary, deep suspension-feeding infauna of the Skolithos ichnoguild. The earliest evidence of plant-arthropod interaction occurred close to the Silurian-Devonian boundary, but widespread and varied feeding patterns are known from the Carboniferous. During the Carboniferous, permanent subaqueous lacustrine settings were colonized by a diverse, mobile detritus-feeding epifauna of the Mermia ichnoguild, which reflects a significant palaeoenvironmental expansion of trace fossils. Paleozoic ichnologic evidence supports direct routes to the land from marginal marine environments, and migration to lakes from land settings. All nonmarine sedimentary environments were colonized by the Carboniferous, and subsequent patterns indicate an increase in ecospace utilization within already colonized depositional settings. During the Permian, back-filled traces of the Scoyenia ichnoguild record the establishment of a mobile, intermediate-depth, deposit-feeding in-fauna in alluvial and transitional alluvial-lacustrine sediment. Diversification of land plants and the establishment of ecologically diverse plant communities through time provided new niches to be exploited by arthropods. Nevertheless, most ot the evolutionary feeding innovations took place relatively early, during the Late Palaeozoic or early Mesozoic. A stationary deep unfauna, the Camborygma ichnoguild, was developed in Triassic transitional alluvial-lacustrinbe deposits. Terrestrial environments hosted the rise of complex social behavioral patterns, as suggested by the probable presence of hymenopteran and isopteran nests in Triassic paleosols. An increase in diversity of trace fossils is detected in Triassic-Jurassic eolian deposits, where the ichnofauna displays more varied behavioral patterns than their Paleozoic counterparts. Also, a mobile, intermediate-depth, deposit-feeding infauna, the Vagorichnus ichnoguild, was established in deep lake environments during the Jurassic. In contrast to Paleozoic permanent subaqueous assemblages typified by surface trails, Jurassic ichnocoenoses are dominated by infaunal burrows. High density of infaunal deposit-feeding traces of the Planolites ichnoguild caused major disruption of lacustrine sedimentary fabrics during the Cretaceous. Most insect mouthpart classes, functional feeding groups, and dietary guilds were established by the end of the Cretaceous. Diversification of modern insects is recorded by the abundance and complexity of structures produced by wasps, bees, dung-beetles, and termites in Cretaceous-Tertiary paleosols. The increase in bioturbation migrated from fluvial and lake-margin settings to permanent subaqueous lacustrine environments through time.

Palaios↗
USGS2008

Geologic controls on the growth of petroleum reserves

The geologic characteristics of selected siliciclastic (largely sandstone) and carbonate (limestone and dolomite) reservoirs in North America (largely the continental United States) were investigated to improve our understanding of the role of geology in the growth of petroleum reserves. Reservoirs studied were deposited in (1) eolian environments (Jurassic Norphlet Formation of the Gulf Coast and Pennsylvanian-Permian Minnelusa Formation of the Powder River Basin), (2) interconnected fluvial, deltaic, and shallow marine environments (Oligocene Frio Formation of the Gulf Coast and the Pennsylvanian Morrow Formation of the Anadarko and Denver Basins), (3) deeper marine environments (Mississippian Barnett Shale of the Fort Worth Basin and Devonian-Mississippian Bakken Formation of the Williston Basin), (4) marine carbonate environments (Ordovician Ellenburger Group of the Permian Basin and Jurassic Smackover Formation of the Gulf of Mexico Basin), (5) a submarine fan environment (Permian Spraberry Formation of the Midland Basin), and (6) a fluvial environment (Paleocene-Eocene Wasatch Formation of the Uinta-Piceance Basin). The connection between an oil reservoir's production history and geology was also evaluated by studying production histories of wells in disparate reservoir categories and wells in a single formation containing two reservoir categories. This effort was undertaken to determine, in general, if different reservoir production heterogeneities could be quantified on the basis of gross geologic differences. It appears that reserve growth in existing fields is most predictable for those in which reservoir heterogeneity is low and thus production differs little between wells, probably owing to relatively homogeneous fluid flow. In fields in which reservoirs are highly heterogeneous, prediction of future growth from infill drilling is notably more difficult. In any case, success at linking heterogeneity to reserve growth depends on factors in addition to geology, such as engineering and technological advances and political or cultural or economic influences.

Bulletin↗
USGS2003

Chapter C: Hydrothermal Enrichment of Gallium in Zones of Advanced Argillic Alteration-Examples from the Paradise Peak and McDermitt Ore Deposits, Nevada

Gallium is produced as a byproduct from bauxite and zinc sulfide ores and rarely from primary Ga ores. High Ga contents (>60 ppm) can occur in zones of advanced argillic alteration consisting of alunite+kaolinite+quartz associated with quartz-alunite (high sulfidation Au-Ag) deposits. In a magmatic-hydrothermal environment, the zones of advanced argillic alteration associated with quartz-alunite (high sulfidation) Au-Ag deposits have the highest Ga contents (max 120 ppm). In these Au deposits, Ga is enriched in the zone of alunite+kaolinite alteration and depleted in the zone of quartz-rich alteration within acid-leached rocks. Peripheral zones of argillic alteration have Ga contents and Al/Ga ratios similar to those in unaltered volcanic rocks. The zones of advanced argillic alteration that formed in a steam-heated environment in association with hot-spring-type Hg-Au deposits are not Ga enriched, and residual silicified zones have very low Ga contents. The McDermitt Hg and Paradise Peak Au-Hg deposits, Nev., have zones of advanced argillic alteration that are Ga enriched. At the Paradise Peak Au-Hg deposits, Ga is enriched in the zone of alunite+jarosite alteration that formed in a magmatic-hydrothermal environment. Ga is depleted in the zone of opal+alunite alteration formed in a steam-heated environment, in residual silicified zones formed in a magmatic-hydrothermal environment, and in zones of supergene jarosite alteration. At the McDermitt Hg deposit, Ga is enriched in the zone of alunite+kaolinite alteration below the zone of adularia-quartz alteration that coincides with the Hg ore body. The spatial relation of Ga enrichment to alunite-kaolinite alteration suggests that formation in a magmatic-hydrothermal environment. X-ray-absorption spectra of Ga-enriched samples from the McDermitt Hg deposit are similar to that of gallium sulfate and support the association of Ga enrichment with alunite alteration.

Bulletin↗
USGS1960

Wetland and water supply

The Geological Survey has received numerous inquiries about the effects of proposed changes in the wetland environment. The nature of the inquiries suggests a general confusion in the public mind as to wetland values and an increasing concern by the public with the need for facts as a basis for sound decisions when public action is required. Perhaps the largest gap in our knowledge is in regard to the role played by the wetland in the natural water scheme. Specialists in such fields as agriculture and conservation have studied the wetland in relation to its special uses and values for farming and as a habitat for fish and wildlife. However, except as studied incidentally by these specialists, the role of the wetland with respect to water has been largely neglected. This facet of the wetland problem is of direct concern to the Geological Survey. We commonly speak of water in terms of its place in the hydrologic environment---as, for example, surface water or ground water. These terms imply that water can be neatly pigeonholed. With respect to the wetland environment nothing can be further from the truth. In fact, one objective of this discussion is to demonstrate that for the wetland environment surface water, ground water, and soil water cannot be separated realistically, but are closely interrelated and must be studied together. It should be noted that this statement holds true for the hydrologic environment in general, and that the wetland environment is by no means unique in this respect. Our second and principal objective is to identify some of the problems that must be studied in order to clarify the role of the wetland in relation to water supply. We have chosen to approach these objectives by briefly describing one area for which we have some information, and by using this example to point out some of the problems that need study. First, however, let us define what we, as geohydrologists, mean by wetland and briefly consider wetland classifications. For our purpose wetlands are land areas that are covered with shallow water or subjected to intermittent flooding and subsequent slow drainage, and which generally are characterized by an accumulation of organic matter hereafter termed swamp deposits.' These wetlands may be classified in a number of different ways depending on the purpose of the classifier. For example, the Fish and Wildlife Service classifies wetlands into 20 different types based on water quality (fresh or salty), drainage, and vegetation. At the risk of some oversimplification we might consider 4 types of wetland from the standpoint of hydrology: (1) fresh-water swamps in which the swamp deposits are underlain by glacial till or bedrock; (2)fresh-water swamps in which the swamp deposits are underlain by marine or lacustrine clay and silt; (3) fresh-water swamps in which the swamp deposits are underlain by glacial outwash or alluvium consisting mostly of sand or sand and gravel; and (4) salt .marshes and salt meadows. The three fresh-water types of wetland are of interest with respect to water supply, and of these, the type in which swamp deposits are underlain by glacial outwash is of particular interest in New England. In the Ipswich River basin above the Geological Survey gaging station at South Middleton, Mass., is an area of 44 square miles which forms the headwaters section of the basin. The relief of the area is low. About half the area consists of hills mostly underlain by bedrock but mantled by a thin layer of glacial till. The other half consists Of lowlands---including swamps, low terraces and plains---underlain by glacial outwash, Swampland, used hereafter as a synonym for wetland, forms about a fourth of the area. Some of the swamps occupy depressions in the till blanket and are situated at somewhat higher levels than the lowlands. The largest swamps, however, border the Ipswich River and its tributaries. Here the swamp deposits, which consist of muck and peat mixed with s

Circular↗
USGS2009

Analysis of vertical flow during ambient and pumped conditions in four monitoring wells at the Pantex Plant, Carson County, Texas, July-September 2008

The Pantex Plant is a U.S. Department of Energy/National Nuclear Security Administration (USDOE/NNSA)-owned, contractor-operated facility managed by Babcock & Wilcox Technical Services Pantex, LLC (B&W Pantex) in Carson County, Texas, approximately 17 miles northeast of Amarillo. The U.S. Geological Survey, in cooperation with B&W Pantex through the USDOE/NNSA, made a series of flowmeter measurements and collected other borehole geophysical logs during July–September 2008 to analyze vertical flow in screened intervals of four selected monitoring wells (PTX01–1012, PTX06–1044, PTX06–1056, and PTX06–1068) at the Pantex Plant. Hydraulic properties (transmissivity values) of the section of High Plains (Ogallala) aquifer penetrated by the wells also were computed. Geophysical data were collected under ambient and pumped flow conditions in the four monitoring wells. Unusually large drawdowns occurred at two monitoring wells (PTX06–1044 and PTX06–1056) while the wells were pumped at relatively low rates. A decision was made to redevelop those wells, and logs were run again after redevelopment in the two monitoring wells. Logs collected in monitoring well PTX01–1012 during ambient conditions indicate a dynamic environment that probably was affected by pumping of nearby irrigation or public-supply wells. During pumping, downward vertical flow of 0.2 to 2.1 gallons per minute that occurred during ambient conditions was either reversed or reduced. During pumping, a gradual trend of more positive flowmeter values (upward flow) with distance up the well was observed. Estimated total transmissivity for four production zones identified from Flow–B numerical model results taken together was calculated to be about 3,100 feet squared per day. Logs collected in monitoring well PTX06–1044 during ambient conditions before redevelopment indicate a static environment with no flow. During pumping there was upward vertical flow at rates ranging from 0.1 to about 1.5 gallons per minute. During pumping, a gradual trend of more positive flowmeter values (upward flow) with distance up the well was observed. Estimated total transmissivity before redevelopment for five production zones identified from Flow–B numerical model results, and transmissivity values for each zone, are considered to be in error because of the lack of communication between the well and the aquifer before redevelopment. After redevelopment, logs for well PTX06–1044 during ambient conditions indicate a near-static environment with minimal downward flow. During pumping there was upward vertical flow at rates ranging from 0.5 to about 4.8 gallons per minute. During pumping, a gradual trend of more positive flowmeter values with distance up the well was observed. Estimated total transmissivity after redevelopment for the same five identified production zones taken together was calculated to be about 520 feet squared per day. Logs collected in monitoring well PTX06–1056 during ambient conditions before redevelopment indicate a static environment with no flow. During pumping there was upward vertical flow at rates ranging from 0.3 to about 1.5 gallons per minute. During pumping, a gradual trend of more positive flowmeter values (upward flow) with distance up the well was observed. Estimated total transmissivity before redevelopment for four production zones identified from Flow–B numerical model results taken together was calculated to be about 450 feet squared per day. After redevelopment, logs collected in monitoring well PTX06–1056 during ambient conditions indicate a near-static environment with no flow except for a very small amount of downward flow near the bottom of the well. During pumping there was upward vertical flow at rates ranging from 0.7 to about 2.9 gallons per minute. Estimated total transmissivity after redevelopment for five production zones identified from Flow–B numerical model results taken together was calculated to be about 330 feet squared per day. Logs collected in monitoring well PTX06–1068 during ambient conditions indicate a static environment with no flow. During pumping there was upward vertical flow at rates ranging from 0.4 to 4.8 gallons per minute. During pumping, a gradual trend of more positive flowmeter values (upward flow) with distance up the well was observed. Estimated total transmissivity for four production zones identified from Flow–B numerical model results taken together was calculated to be about 200 feet squared per day.

Open-File Report↗
USGS1977

Factors controlling localization of uranium deposits in the Dakota Sandstone, Gallup and Ambrosia Lake mining districts, McKinley County, New Mexico

Geologic studies were made at all of the uranium mines and prospects in the Dakota Sandstone of Early(?) and Late Cretaceous age in the Gallup mining district, McKinley County, New Mexico. Dakota mines in the adjacent Ambrosia Lake mining district were visited briefly for comparative purposes. Mines in the eastern part of the Gallup district, and in the Ambrosia Lake district, are on the Chaco slope of the southern San Juan Basin in strata which dip gently northward toward the central part of the basin. Mines in the western part of the Gallup district are along the Gallup hogback (Nutria monocline) in strata which dip steeply westward into the Gallup sag. Geologic factors which controlled formation of the uranium deposits in the Dakota Sandstone are: (1) a source of uranium, believed to be uranium deposits of the underlying Morrison Formation of Late Jurassic age; (2) the accessibility to the Dakota of uranium-bearing solutions from the Morrison; (3) the presence in the Dakota of permeable sandstone beds overlain by impermeable carbonaceous shale beds; and (4) the occurrence within the permeable Dakota sandstone beds of carbonaceous reducing material as bedding-plane laminae, or as pockets of carbonaceous trash. Most of the Dakota uranium deposits are found in the lower part of the formation in marginal-marine distributary-channel sandstones which were deposited in the backshore environment. However, the Hogback no. 4 (Hyde) Mine (Gallup district) occurs in sandy paludal shale of the backshore environment, and another deposit, the Silver Spur (Ambrosia Lake district), is found in what is interpreted to be a massive beach or barrier-bar sandstone of the foreshore environment in the upper part of the Dakota. The sedimentary depositional environment most favorable for the accumulation of uranium is that of backshore areas lateral to main distributary channels, where levee, splay, and some distributary-channel sandstones intertongue with gray carbonaceous shales and siltstones of the well-drained swamp environment. Deposits of black carbonaceous shale which were formed in the poorly drained swamp deposits of the interfluve area are not favorable host rocks for uranium. The depositional energy levels of the various environments in which the sandstone and shale beds of the Dakota were deposited govern the relative favorability of the strata as uranium host rocks. In the report area, uranium usually occurs in carbonaceous sandstone deposited under low- to medium-energy fluvial conditions within distributary channels. A prerequisite, however, is that such sandstone be overlain by impermeable carbonaceous shale beds. Low- to medium-energy fluvial conditions result in the deposition of sandstone beds having detrital carbonaceous material distributed in laminae or in trash pockets on bedding planes. The carbonaceous laminae and trash pockets provide the necessary reductant to cause precipitation of uranium from solution. High-energy fluvial conditions result in the deposition of sandstones having little or no carbonaceous material included to provide a reductant. Very low energy swampy conditions result in carbonaceous shale deposits, which are generally barren of uranium because of their relative impermeability to migrating uranium-bearing solutions.

Open-File Report↗
USGS1998

Mercury concentrations in estuarine sediments, Lavaca and Matagorda bays, Texas, 1992

A preliminary assessment of the distribution and variability of total mercury concentrations in five sediment environments—open water, ship channel, dredged spoil, oyster reef, and salt marsh—of the Lavaca-Matagorda Bays estuarine system along the central Texas Gulf Coast shows that the largest total mercury concentrations in the bays are in the 10- to 20-centimeter sample-depth zone in 2 of the 3 sample areas (1 open water and 1 salt marsh) closest to Point Comfort. The concentrations range from 137 to 1,270 micrograms per kilogram in the open-water environment and 73.8 to 1,900 micrograms per kilogram in the saltmarsh environment. In the surface-sample-depth zones among all sediment environments, total mercury concentrations typically are largest in the open-water environment and smallest in the dredged-spoil and salt-marsh environments. Open-water sample areas 1–01, 1–02 (middle Lavaca Bay), and 1–06 (upper Matagorda Bay) have median total mercury concentrations in all three sample-depth zones (0 to 2, 10 to 20, and 20 to 50 centimeters) greater than detection limits. Median concentrations for the different depth zones in the three sample areas range from 30.5 to 705 micrograms per kilogram. Statistical tests indicate that in all three sample-depth zones in open-water sediments, median total mercury concentrations in some sample areas are significantly different from median total mercury concentrations in other sample areas. Another statistical test indicates that the variance in concentrations of open-water samples collected within 10 meters of each other is the same as the variance in concentrations of samples collected randomly within each 1 square kilometer. However, the degree to which a probable lack of independence among the closely spaced data affects the test result is not known. Rank correlation coefficients between total mercury concentration and grain-size fractions (percentages of sand, silt, clay, and silt plus clay) and between total mercury concentration and total organic carbon concentration for open-water sample areas indicate that total mercury concentration has a significant positive correlation with clay percentage in 4 of the 8 open-water sample areas. In 6 of the 8 open-water sample areas, total mercury concentration has a significant positive correlation with silt-plus-clay percentage and total organic carbon concentration. The use of a technique known as kriging to estimate total mercury concentrations at unmeasured sites on the basis of sampling sites where mercury concentrations are measured in openwater sediments in the 0- to 2-centimeter sampledepth zone was explored. Kriging to estimate concentrations in the areas between clusters of sample data points is not a practical solution for obtaining a distribution of concentrations in the bays. U.S. Environmental Protection Agency Method 7471 (Cold Vapor Atomic Absorption) was an acceptable analytical method for determining the total mercury concentrations in the Lavaca-Matagorda Bays estuarine sediment samples. Measurement of additional trace metals would aid in the characterization of total mercury concentrations and in the identification of concentrator/collector relations that are principally responsible for the adsorption of mercurous compounds to particulates in the bottom sediments.

Texas↗
USGS2013

Managing the effects of endocrine disrupting chemicals in wastewater-impacted streams

A revolution in analytical instrumentation circa 1920 greatly improved the ability to characterize chemical substances. This analytical foundation resulted in an unprecedented explosion in the design and production of synthetic chemicals during and post-World War II. What is now often referred to as the 2nd Chemical Revolution has provided substantial societal benefits; with modern chemical design and manufacturing supporting dramatic advances in medicine, increased food production, and expanding gross domestic products at the national and global scales as well as improved health, longevity, and lifestyle convenience at the individual scale. Presently, the chemical industry is the largest manufacturing sector in the United States (U.S.) and the second largest in Europe and Japan, representing approximately 5% of the Gross Domestic Product (GDP) in each of these countries. At the turn of the 21st century, the chemical industry was estimated to be worth more than $1.6 trillion and to employ over 10 million people, globally. During the first half of the 20th century, the chemical sector expanded rapidly, the chemical industry enjoyed a generally positive status in society, and chemicals were widely appreciated as fundamental to individual and societal quality of life. Starting in the 1960s, however, the environmental costs associated with the chemical industry increasingly became the focus, due in part to the impact of books like “Silent Spring” and “Our Stolen Future” and to a number of highly publicized environmental disasters. Galvanizing chemical industry disasters included the 1976 dioxin leak north of Milan, Italy, the Love Canal evacuations in Niagara, New York beginning in 1978, and the Union Carbide leak in Bhopal, India in 1984. Understanding the environmental impact of synthetic compounds is essential to any informed assessment of net societal benefit, for the simple reason that any chemical substance that is in commercial production or use will eventually find its way to the environment. Not surprisingly given the direct link to profits, manufacturers intensely investigate and routinely document the potential benefits of new chemicals and chemical products. In contrast, the environmental risks associated with chemical production and uses are often investigated less intensely and are poorly communicated. An imbalance in the risk-benefit analysis of any synthetic chemical substance or naturally occurring chemical, which presence and concentration in the environment largely reflects human activities and management, is a particular concern owing to the fundamental link between chemistry and biology. Biological organisms are intrinsically a homeostatic balance of innumerable internal and external chemical interactions and, thus, inherently sensitive to changes in the external chemical environment.

Book chapter↗
USGS2019

The importance of natural versus human factors for ecological conditions of streams and rivers

Streams are influenced by watershed-scale factors, such as climate, geology, topography, hydrology, and soils, which mostly vary naturally among sites, as well as human factors, agriculture and urban development. Thus, natural factors could complicate assessment of human disturbance. In the present study, we use structural equation modeling and data from the 2008-2009 United States National Rivers and Streams Assessment to quantify the relative importance of watershed-scale natural and human factors for in-stream conditions. We hypothesized that biological condition, represented using a diatom multimetric index (MMI), is directly affected by in-stream physicochemical environment, which in turn is regulated by natural and human factors. We evaluated this hypothesis at both national and ecoregion scales to understand how influences vary among regions. We found that direct influences of in-stream environment on diatom MMIs were greater than natural and human factors at the national scale and in all but one ecoregion. Meanwhile, in-stream environments were jointly explained by natural variations in precipitation, base flow index, hydrological stability, % volcanic rock, soil water table depth, and soil depth and by human factors measured as % crops, % other agriculture, and % urban land use. The explained variance of in-stream environment by natural and human factors ranged from 0.30 to 0.75, for which natural factors independently accounted for the largest proportion of explained variance at the national scale and in seven ecoregions. Covariation between natural and human factors accounted for a higher proportion of explained variance of in-stream environment than unique effects of human factors in most ecoregions. Ecoregions with relatively weak effects by human factors had relatively high levels of covariance, high levels of human disturbance, or small ranges in human disturbance. We conclude that accounting for effects of natural factors and their covariation with human factors will be important for accurate ecological assessments.

Science of the Total Environment↗
USGS2021

Germination potential of baldcypress (Taxodium distichum) swamp soil seed bank along geographical gradients

Changing environments of temperature, precipitation and moisture availability can affect vegetation in ecosystems, by affecting regeneration from the seed bank. Our objective was to explore the responses of soil seed bank germination to climate-related environments along geographic gradients. We collected seed banks in baldcypress ( Taxodium distichum ) swamps along the Mississippi River and the Gulf of Mexico Coast in the United States, which have distinct temperature and/or precipitation gradients, and germinated them in a greenhouse. The frequency, richness and seed density of species germinated from the seed bank were compared between various geographic locations, experimental water regimes (saturated, flooded) and wetland types (tidal, non-tidal and inland swamps). We also analyzed the relationship of seed density to the environment by using a Non-metric Multi-dimensional Scaling (NMDS) model. Sixty-one species germinated from the seed bank, differing in pattern by geographic location, experimental water regime and wetland type. The foundation species (i.e., T. distichum and Cephalanthus occidentalis ) germinated with a niche affinity for the northern part of the latitudinal gradient (Tennessee and Illinois) and these species may shift northward with climate change. Some species had higher seed density in the locations that were subject to more persistent drought conditions (e.g., Texas) including Cyperus rotundus and Gratiola virginiana , indicating that these species may be better adapted to sites with high temperature and low precipitation. In contrast, certain species including Saururus cernuus and Ludwigia palustris were present throughout the range of these gradients, and so may be more resilient to any future climate shifts. We found that the regeneration potential of baldcypress swamps might be altered by changes in local and climate environment because of nuances of responses of seed banks to climates along latitudinal and longitudinal gradients. Our study can help predict vegetation regeneration potential to climate change environments depending on the ability of these species to disperse and maintain seed banks.

Science of the Total Environment↗
USGS2024

Effects of harmful algal blooms on amphibians and reptiles are under-reported and under-represented

Harmful algal blooms (HABs) are a persistent and increasing problem globally, yet we still have limited knowledge about how they affect wildlife. Although semi-aquatic and aquatic amphibians and reptiles have experienced large declines and occupy environments where HABs are increasingly problematic, their vulnerability to HABs remains unclear. To inform monitoring, management, and future research, we conducted a literature review, synthesized the studies, and report on the mortality events describing effects of cyanotoxins from HABs on freshwater herpetofauna. Our review identified 37 unique studies and 71 endpoints (no-observed-effect and lowest-observed-effect concentrations) involving 11 amphibian and 3 reptile species worldwide. Responses varied widely among studies, species, and exposure concentrations used in experiments. Concentrations causing lethal and sublethal effects in laboratory experiments were generally 1 to 100 µg/L, which contains the mean value of reported HAB events but is 70 times less than the maximum cyanotoxin concentrations reported in the environment. However, one species of amphibian was tolerant to concentrations of 10,000 µg/L, demonstrating potentially immense differences in sensitivities. Most studies focused on microcystin-LR (MC-LR), which can increase systemic inflammation and harm the digestive system, reproductive organs, liver, kidneys, and development. The few studies on other cyanotoxins illustrated that effects resembled those of MC-LR at similar concentrations, but more research is needed to describe effects of other cyanotoxins and mixtures of cyanotoxins that commonly occur in the environment. All experimental studies were on larval and adult amphibians; there were no such studies on reptiles. Experimental work with reptiles and adult amphibians is needed to clarify thresholds of tolerance. Only nine mortality events were reported, mostly for reptiles. Given that amphibians likely decay faster than reptiles, which have tissues that resist decomposition, mass amphibian mortality events from HABs have likely been under-reported. We propose that future efforts should be focused on seven major areas, to enhance our understanding of effects and monitoring of HABs on herpetofauna that fill important roles in freshwater and terrestrial environments. Environ Toxicol Chem 2024;00:1–14. Published 2024. This article is a U.S. Government work and is in the public domain in the USA. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.

Environmental Toxicology and Chemistry↗
USGS2006

Response of microbial community composition and function to soil climate change

Soil microbial communities mediate critical ecosystem carbon and nutrient cycles. How microbial communities will respond to changes in vegetation and climate, however, are not well understood. We reciprocally transplanted soil cores from under oak canopies and adjacent open grasslands in a California oak-grassland ecosystem to determine how microbial communities respond to changes in the soil environment and the potential consequences for the cycling of carbon. Every 3 months for up to 2 years, we monitored microbial community composition using phospholipid fatty acid analysis (PLFA), microbial biomass, respiration rates, microbial enzyme activities, and the activity of microbial groups by quantifying 13C uptake from a universal substrate (pyruvate) into PLFA biomarkers. Soil in the open grassland experienced higher maximum temperatures and lower soil water content than soil under the oak canopies. Soil microbial communities in soil under oak canopies were more sensitive to environmental change than those in adjacent soil from the open grassland. Oak canopy soil communities changed rapidly when cores were transplanted into the open grassland soil environment, but grassland soil communities did not change when transplanted into the oak canopy environment. Similarly, microbial biomass, enzyme activities, and microbial respiration decreased when microbial communities were transplanted from the oak canopy soils to the grassland environment, but not when the grassland communities were transplanted to the oak canopy environment. These data support the hypothesis that microbial community composition and function is altered when microbes are exposed to new extremes in environmental conditions; that is, environmental conditions outside of their "life history" envelopes. ?? 2006 Springer Science+Business Media, Inc.

Microbial Ecology↗
USGS2026

Structural evolution of iron coordination in proteins across Earth’s oxygenation history

Protein metal-binding sites support essential biological functions shaped by protein fold, subunit interactions, and cofactor chemistry. Because these sites encode both biochemical function and environmental constraint, they offer a route to connect protein evolution with changes in Earth’s surface environment through time. Of particular interest is iron (Fe), the most widely used metal in biology and a cofactor central to both anaerobic and aerobic metabolism. Here, we systematically compare the immediate chemical environments of functionally essential Fe-binding sites in three-dimensional protein structures to test whether Fe coordination spheres differ across oxygen contexts. Using a curated dataset of experimentally determined structures, we identify a clear shift in the local chemistry of Fe-binding environments from anaerobic to aerobic proteins. Aerobic Fe sites are significantly more hydrophilic than anaerobic ones, and amino-acid composition analyses show reduced cysteine use in aerobic Fe-binding neighborhoods. These patterns suggest that as Earth’s surface environments became more oxygenated, proteins retained Fe as a core redox metal while reconfiguring local coordination chemistry in ways less vulnerable to oxidative damage. More broadly, this study introduces and applies the Coordination Sphere Analysis and Comparison (CSAC) workflow, an open and archived Python workflow for extracting local metal-binding environments from structure datasets, providing a framework for linking metalloprotein structure to evolutionary and geobiological transitions across Earth history.

Discover Life↗
USGS1994

Model for dolomite formation in northwest Florida

Petrographic methods are used to examine the nature of the Floridan post-Oligocene unconformity and diagenetic responses in the associated carbonate units. The study addresses the depositional environment and the character of sediments associated with the unconformity, types and timing of diagenetic changes, and mode of dolomitization for the Suwannee Limestone dolomites and basal Hawthorn Group dolosilts. The purpose of the study is to determine if the original texture of geologic materials is preserved more frequently in rocks deposited in a supratidal environment in the uppermost Floridan carbonates, to examine possible sources of magnesium for the dolomitization that has occurred in the Floridan aquifer, and to determine the chemical environment of dolomite formation. On the basis of lithology, the tri-county study area can be divided into two regions; one in which the uppermost Floridan carbonate is calcareous or locally silicified, and one in which the aquifer system is capped with dolomite. Lateral interfingering between the two regions is apparent, and it is inferred that the boundary between the limestone and dolomite represents a geochemical boundary between a mixed marine and freshwater environment and a subaerially exposed freshwater environment. Where dolomite has replaced the uppermost Suwannee Limestone, the dolomite is overlain by a thin unit of dolosilt. The predominant source of magnesium for the dolomitization that occurred in the study area is probably seawater.

Journal of Hydrology↗