USGS Science⌕ Search

SEARCH · USGS Science

Results for “Community Ecology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,063 records · Page 59Linked to original sources

Winter severity, fish community, and availability to traps explain most of the variability in estimates of adult sea lamprey in Lake Superior

Animal populations are assessed to estimate rates of artificial and natural mortality at ecologically relevant spatial and temporal scales to develop exploitation quotas. But how the population’s natural mortality rate and how the ability to observe the population changes through time are poorly understood in most invasive fishes, despite efforts to control their populations. By investigating a 30-year abundance index of invasive sea lamprey ( Petromyzon marinus ) in Lake Superior, we found that the index was highly correlated (R 2 = 0.75) with biotic and abiotic factors hypothesized to influence sea lamprey natural mortality and their availability to index traps. The index was lowest in years (1) following winters with below average ice cover on Lake Superior, (2) when stream discharge during sea lamprey migration was below average, (3) when adult sea lamprey were smaller than average, and (4) when adult sea lamprey were more likely to be distributed in tributaries on the east side of Lake Superior. These results highlight the need for policy makers to consider invasive species abundance indexes not just in the context of control effort, but also in the context of biotic and abiotic conditions because they could markedly influence natural mortality or the ability to observe highly suppressed populations.

Lake Superior↗

Greenup and evapotranspiration following the Minute 319 pulse flow to Mexico: An analysis using Landsat 8 Normalized Difference Vegetation Index (NDVI) data

In the southwestern U.S., many riparian ecosystems have been altered by dams, water diversions, and other anthropogenic activities. This is particularly true of the Colorado River, where numerous dams and agricultural diversions have affected this water course, especially south of the U.S.–Mexico border. In the spring of 2014, 130 million cubic meters of water was released to the lower Colorado River Delta in Mexico. To understand the impact of this pulse flow release on vegetation in the delta’s riparian corridor, we analyzed a modified form of Landsat 8 Operational Land Imager (OLI) Normalized Difference Vegetation Index (NDVI*) data. We assessed greenup during the growing period and estimated actual evapotranspiration (ET a ) for the period prior to (yr. 2013) and following (i.e., yr. 2014 and 2015) the pulse flow. We found a significant increase in NDVI* from 2013 to 2014 (P < 0.05) and a decrease from 2014 to 2015; however, 2015 levels were still significantly higher than in 2013. ET a was also higher in 2014 vs. 2013, with an estimated 74.5 million cubic meters in 2013 and 88.9 in 2014. The most intense greening occurred in the zone of inundation but also extended into the non-flooded part of the riparian zone, indicating replenishment of groundwater. These findings suggest the peak response by vegetation to the flow lasted about one year, followed by a decrease in NDVI*. As a long term solution to the declining condition of vegetation, additional pulse releases are likely needed for restoration and survival of riparian plant communities in the Colorado River Delta.

Ecological Engineering↗

Macroinvertebrate communities associated with three aquatic macrophytes (Ceratophyllum demersum, Myriophyllum spicatum, and Vallisneria americana) in Lake Onalaska, Wisconsin

The standing crop and species diversity of macroinvertebrates associated with wild celery (Vallisneria americana), Eurasian watermilfoil (Myriophyllum spicatum), and coontail (Ceratophyllum demersum) were examined in Lake Onalaska, Pool 7 of the upper Mississippi River, during summer 1983. Although Ceratophyllum generally supported the largest invertebrate standing crop (number per g plant dry weight), differences in invertebrate abundance among plant species were not consistent across time. However, the distribution of several taxa were significantly affected by plant species. Hyalella azteca (overall the most abundant species) and Enallagma spp. (the most abundant predator) were consistently most numerous in Ceratophyllum samples and least abundant in Vallisneria samples. Generally, invertebrate community composition differed significantly among plant species throughout the summer.

Wisconsin↗

Decomposition rates and termite assemblage composition in semiarid Africa

Outside of the humid tropics, abiotic factors are generally considered the dominant regulators of decomposition, and biotic influences are frequently not considered in predicting decomposition rates. In this study, I examined the effect of termite assemblage composition and abundance on decomposition of wood litter of an indigenous species (Croton megalobotrys) in five terrestrial habitats of the highly seasonal semiarid Okavango Delta region of northern Botswana, to determine whether natural variation in decomposer community composition and abundance influences decomposition rates. I conducted the study in two areas, Xudum and Santawani, with the Xudum study preceding the Santawani study. I assessed termite assemblage composition and abundance using a grid of survey baits (rolls of toilet paper) placed on the soil surface and checked 2–4 times/month. I placed a billet (a section of wood litter) next to each survey bait and measured decomposition in a plot by averaging the mass loss of its billets. Decomposition rates varied up to sixfold among plots within the same habitat and locality, despite the fact that these plots experienced the same climate. In addition, billets decomposed significantly faster during the cooler and drier Santawani study, contradicting climate-based predictions. Because termite incidence was generally higher in Santawani plots, termite abundance initially seemed a likely determinant of decomposition in this system. However, no significant effect of termite incidence on billet mass loss rates was observed among the Xudum plots, where decomposition rates remained low even though termite incidence varied considerably. Considering the incidences of fungus-growing termites and non-fungus-growing termites separately resolves this apparent contradiction: in both Santawani and Xudum, only fungus-growing termites play a significant role in decomposition. This result is mirrored in an analysis of the full data set of combined Xudum and Santawani data. The determination that natural variation in the abundance of a single taxonomic group of soil fauna, a termite subfamily, determines almost all observed variation in decomposition rates supports the emerging view that biotic influences may be important in many biomes and that consideration of decomposer community composition and abundance may be critical for accurate prediction of decomposition rates.

Okavango Delta↗

Resist-accept-direct (RAD)-A framework for the 21st-century natural resource manager

An assumption of stationarity—i.e. “the idea that natural systems fluctuate within an unchanging envelope of variability” (Milly et al. 2008)—underlies traditional conservation and natural resource management, as evidenced by widespread reliance on ecological baselines to guide protection, restoration, and other management. Although ecological change certainly occurred under the relatively stable conditions of the recent past, the nature of change under intensifying global change is different; it is unidirectional, and rapidly pushing beyond the bounds of historical variability. In the past, a manager could plausibly work to reverse or mitigate many stressors or their impacts to approximate pre-disturbance ecological conditions, but now accelerated warming, changing disturbance regimes, and extreme events associated with climate change reduce that potential. Indeed, even ‘holding the line’ in the face of inexorable human-caused change is ever more difficult and costly. Thus, the convention of using baseline conditions to define goals for today’s resource management is increasingly untenable, presenting practical and philosophical challenges for managers. As formerly familiar ecological conditions continue to change, bringing novelty, surprise, and uncertainty, natural resource managers require a new, shared approach to make conservation decisions. How, for example, should a manager respond to projections of loss of the Joshua tree from much of its current range, or to the emergence of new and different vegetation communities after a large fire event? The RAD (Resist-Accept-Direct) decision framework has emerged over the past decade as a simple tool that captures the entire decision space for responding to ecosystems facing the potential for rapid, irreversible ecological change. It assists managers in making informed, purposeful choices about how to respond to the trajectory of change, and moreover, provides a straightforward approach to support resource managers in collaborating at larger scales across jurisdictions, which today is more urgent than ever.

Natural Resource Report↗

Development of a macrophyte-based index of biotic integrity for Minnesota lakes

Traditional approaches for managing aquatic resources have often failed to account for effects of anthropogenic disturbances on biota that are not directly reflected by chemical and physical proxies of environmental condition. The index of biotic integrity (IBI) is a potentially effective assessment method to integrate ecological, functional, and structural aspects of aquatic systems. A macrophyte-based IBI was developed for Minnesota lakes to assess the ability of aquatic plant communities to indicate environmental condition. The index was developed using quantitative point intercept vegetation surveys for 97 lakes that represent a range of limnological and watershed characteristics. We followed an approach similar to that used in Wisconsin to develop the aquatic macrophyte community index (AMCI). Regional adaptation of the AMCI required the identification of species representative of macrophyte communities in Minnesota. Metrics and scaling methods were also substantially modified to produce a more empirically robust index. Regression analyses indicated that IBI scores reflected statewide differences in lake trophic state (R2 = 0.57, F = 130.3, df = 1, 95, p < 0.005), agricultural (R2 = 0.51, F = 83.0, df = 1, 79, p < 0.005), urban (R2 = 0.22, F = 23.0, df = 1, 79, p < 0.005), and forested land uses (R2 = 0.51, F = 84.7, df = 1, 79, p < 0.005), and county population density (R2 = 0.14, F = 16.6, df = 1, 95, p < 0.005). Variance partitioning analyses using multiple regression models indicated a unique response of the IBI to human-induced stress separate from a response to natural lake characteristics. The IBI was minimally affected by differences in sample point density as indicated by Monte Carlo analyses of reduced sampling effort. Our analysis indicates that a macrophyte IBI calibrated for Minnesota lakes could be useful for identifying differences in environmental condition attributed to human-induced stress gradients. ?? 2010 Elsevier Ltd.

Ecological Indicators↗

Nearshore subtidal community response during and after sediment disturbance associated with dam removal

Dam removal is used increasingly to restore aquatic ecosystems and remove unnecessary or high-risk infrastructure. As the number of removals increases, there is a growing understanding about the hydrologic, geomorphic, and ecological responses to these removals. Most dam removal studies, however, focus on river and watershed responses to dam removal. The removal of two dams on the Elwha River provided a unique opportunity to characterize the response of nearshore (coastal) ecosystems. We conducted SCUBA surveys between 2011 and 2022 to quantify trajectories of change in a nearshore ecosystem during and after dam removal. We focused on the degree to which the abundances of kelp, benthic invertebrates, and fish changed in response to patterns of sediment fluxes during and after dam removal. Our findings point to two pathways of response depending on the disturbance mechanism and species type. Sites with persistent sediment deposition were characterized by wholesale community changes that did not recover to a before dam removal condition. Instead, the sites were colonized by new species that were largely absent prior to dam removal. Sites that experienced high turbidity but lacked persistent seafloor deposition were primarily characterized by a reduction in the abundance of kelp and other algae during dam removal and a rapid recovery after sediment flux to the nearshore declined. Dam removal influences on invertebrates and fish at these sites were more variable, benefiting some species and disadvantaging others. In addition to dam removal, sea star wasting syndrome and a marine heatwave exerted distinct controls on subtidal communities during the same period. The loss of the predatory sea star Pycnopodia helianthoides was associated with gains in some of its prey species, and kelp community changes reflected regional trends in ocean temperature and kelp abundance. The results presented here have important implications for understanding the response of marine ecosystems to future dam removals and similar sediment perturbation events.

Washington↗

Distribution of invasive ants and methods for their control in Hawai'i Volcanoes National Park

The first invasive ants were detected in Hawai`i Volcanoes National Park (HAVO) more than 80 years ago. Ecological impacts of these ants are largely unknown, but studies in Hawai`i and elsewhere increasingly show that invasive ants can reduce abundance and diversity of native arthropod communities as well as disrupt pollination and food webs. Prior to the present study, knowledge of ant distributions in HAVO has primarily been restricted to road- and trail-side surveys of the Kīlauea and Mauna Loa Strip sections of the park. Due to the risks that ants pose to HAVO resources, understanding their distributions and identifying tools to eradicate or control populations of the most aggressive species is an important objective of park managers. We mapped ant distributions in two of the most intensively managed sections of the park, Mauna Loa Strip and Kahuku. We also tested the efficacy of baits to control the Argentine ant ( Linepithema humile ) and the big-headed ant ( Pheidole megacephala ), two of the most aggressive and ecologically destructive species in Hawai`i. Efficacy testing of formicidal bait was designed to provide park managers with options for eradicating small populations or controlling populations that occur at levels beyond which they can be eradicated. Within the Mauna Loa Strip and Kahuku sections of HAVO we conducted systematic surveys of ant distributions at 1625 stations covering nearly 200 km of roads, fences, and transects between August 2008 and April 2010. Overall, 15 ant species were collected in the two areas, with 12 being found on Mauna Loa Strip and 11 at Kahuku. Cardiocondyla kagutsuchi was most widespread at both sites, ranging in elevation from 920 to 2014 m, and was the only species found above 1530 m. Argentine ants and big-headed ants were also found in both areas, but their distributions did not overlap. Surveys of Argentine ants identified areas of infestation covering 560 ha at Mauna Loa Strip and 585 ha at Kahuku. At both sites, upper boundaries of big-headed ants coincided with lower boundaries of Argentine ants. Significantly, Wasmannia auropunctata (little fire ant) was not detected during our surveys. Formicidal baits tested for controlling Argentine ants included Xstinguish TM (containing fipronil at 0.01%), Maxforce &reg; (hydramethylnon 1.0%), and Australian Distance &reg; (pyriproxyfen 0.5%). Each bait was distributed evenly over four 2500 m 2 replicate plots. Applications were repeated approximately four weeks after the initial treatment. Plots were subdivided into 25 subplots and ants monitored within each subplot using paper cards containing tuna bait at approximately one week intervals for about 14 weeks. All treatments reduced ant numbers, but none eradicated ants on any of the plots. Xstinguish TM produced a strong and lasting effect, depressing ant abundance below 1% of control plot levels within the first week and for about eight weeks afterward. Maxforce &reg; was slower to attain maximum effectiveness, reducing ants to 8% of control levels after one week and 3% after six weeks. Australian Distance &reg; was least effective, decreasing ant abundance to 19% of control levels after one week with numbers subsequently rebounding to 40% of controls at four weeks and 72% at 10 weeks. In measurements of the proportion of bait cards at which ants were detected, Xstinguish TM clearly out-performed Maxforce &reg; , reaching a minimum detection rate of 3% of bait cards at one week compared to a low of 19% for Maxforce &reg; two weeks following the second treatment. Although ant abundances were dramatically reduced on Xstinguish TM plots, it is not currently registered for use in the USA. Our results suggest that ant abundance can be greatly reduced using registered baits, but further research is needed before even small-scale eradication of Argentine ants can be achieved. Formicidal baits tested to control big-headed ants included Amdro &reg; (hydramethylnon 0.75%), Xstinguish TM (fipronil 0.01%), Extinguish &reg; Plus (a blend of hydramethylnon 0.365% and S- methoprene 0.25%), and Australian Distance &reg; Plus (hydramethylnon 0.365% and pyriproxyfen 0.25%). Application methods were the same as used for Argentine ants, with baits being applied on two occasions (approximately four weeks apart) on four 2500 m 2 replicate plots. All four baits reduced populations to below 2% of control plot levels within one week of treatment. Amdro &reg; was particularly effective as no ants were detected on two of the four Amdro &reg; plots immediately following treatment. Suppression was long-lived in three of the treatments; Amdro &reg; , Australian Distance &reg; Plus, and Extinguish &reg; Plus all maintained ant abundances at levels less than 1% of control plots over 12 weeks of study. In contrast, ant abundances in Xstinguish TM plots rose to 7% of control plots after four weeks and 20% after 10 weeks. Our results corroborate other recent studies indicating that small populations of big-headed ants can be controlled in natural areas using products registered in the USA.

Hawaii↗

Biological communities and geomorphology of patch reefs in Biscayne National Park, Florida, U.S.A.

Coral reef ecosystem management benefits from continual, quantitative assessment of the resources being managed, plus assessment of factors that affect distribution patterns of organisms in the ecosystem. In this study, we investigated the relationships among physical, benthic, and fish variables in effort to help explain the distribution patterns of ecologically and economically important species on twelve patch reefs within Biscayne National Park (BNP), Florida, U.S.A. We visited 196 randomly-located sampling stations across twelve shallow (< 10m) patch reefs, using SCUBA to conduct our surveys. We measured physical variables (e.g., substratum type), estimated the percent cover of benthic community members (e.g., coral, algae), and counted and estimated mean size for each fish species observed. We also used high-density bathymetric data collected remotely via airborne laser surveying (Experimental Advanced Airborne Research Lidar (EAARL)) to calculate rugosity (bumpiness) of the reef habitat. Here we present our findings visually by graphing our quantitative community and physical structure data simultaneously in a GIS map format. You will see that biological organisms arrange themselves on each patch reef in a non-random manner. For example, many species of fish prefer to locate themselves in areas of the reef where the rugosity index is high. Rugose parts of the reef provide them with good hiding places from predators. These maps (and the data used to create them) are permanent records of the status of reef resources found on these twelve patch reefs in BNP as of September, 2003. The survey data found in the shapefile located on this CD product includes benthic percent cover data for algae, coral, encrusting invertebrates, and substratum type, in addition to gorgonian abundance and volume, total fish abundance and species richness, and specific counts for Acanthurids (surgeonfish), Scarids (parrotfish), Lutjanids (snappers), Haemulids (grunts), Serranids (groupers), and Pomacentrids (damselfish).

Florida↗

Integrating observations and models to determine the effect of seasonally frozen ground on hydrologic partitioning in alpine hillslopes in the Colorado Rocky Mountains, USA

This study integrated spatially distributed field observations and soil thermal models to constrain the impact of frozen ground on snowmelt partitioning and streamflow generation in an alpine catchment within the Niwot Ridge Long-Term Ecological Research site, Colorado, USA. The study area was comprised of two contrasting hillslopes with notable differences in topography, snow depth and plant community composition. Time-lapse electrical resistivity surveys and soil thermal models enabled extension of discrete soil moisture and temperature measurements to incorporate landscape variability at scales and depths not possible with point measurements alone. Specifically, heterogenous snowpack thickness (~0–4 m) and soil volumetric water content between hillslopes (~0.1–0.45) strongly influenced the depths of seasonal frost, and the antecedent soil moisture available to form pore ice prior to freezing. Variable frost depths and antecedent soil moisture conditions were expected to create a patchwork of differing snowmelt infiltration rates and flowpaths. However, spikes in soil temperature and volumetric water content, as well as decreases in subsurface electrical resistivity revealed snowmelt infiltration across both hillslopes that coincided with initial decreases in snow water equivalent and early increases in streamflow. Soil temperature, soil moisture and electrical resistivity data from both wet and dry hillslopes showed that initial increases in streamflow occurred prior to deep soil water flux. Temporal lags between snowmelt infiltration and deeper percolation suggested that the lateral movement of water through the unsaturated zone was an important driver of early streamflow generation. These findings provide the type of process-based information needed to bridge gaps in scale and populate physically based cryohydrologic models to investigate subsurface hydrology and biogeochemical transport in soils that freeze seasonally.

Colorado↗

Global review reveals how disparate study motivations, analytical designs, and focal ions limit understanding of salinization effects on freshwater animals

Global salinization of freshwaters is adversely affecting biotic communities and ecosystem processes. We reviewed six decades (1960–2020) of literature published on animal responses to increased salinities across different taxonomic and ecological contexts and identified knowledge gaps. From 585 journal articles, we characterized 5924 responses of mollusks, crustaceans, zooplankton, non-arthropod invertebrates (NAI), insects, fishes, and amphibians to salinization. Insects and fishes were the most studied taxa; Na + and Cl − were the most studied ions − . Collectively, concentrations of the ions examined typically spanned five orders of magnitude. Species' invasiveness was a key motivation for studying mollusks, crustaceans, and fishes; threats of urbanization and road salts were key motivations for studying NAI, zooplankton, and amphibians. Laboratory studies were more common than field studies for most taxa. Focal life stages in laboratory studies varied widely but juveniles and adults were represented similarly in field studies. Studies of mollusks, NAI, and crustacean focused on adults; studies of zooplankton, insects, fishes, and amphibians focused on juveniles. Organismal- and population-level responses measuring solute uptake, internal chemistry, body condition, or ion concentrations predominated laboratory studies; population- and assemblage-level responses measuring abundance, spatial distribution, or assemblage composition predominated field studies. Negative responses to salinization predominated but positive and unimodal responses were apparent across all taxa and organizational levels. Key topics for further research include a) salinity responses by more taxa, b) responses to especially toxic ions (i.e., potassium, bicarbonate, sulfate, magnesium), c) mechanisms causing positive and unimodal responses, d) traits underpinning responses, e) effects transcending organizational levels, f) ion-specific response thresholds, and g) interactions between salinity and other stressors. Our review suggests inter-taxa variation in sensitivity to salinization reflects occurrence of certain biological traits, including gill-breathing, semi-permeable skin, multiple life stages, and limited mobility. We propose a traits-based framework to predict salinization sensitivity from shared traits. This evolutionary approach could inform management aimed at preventing or reducing adverse impacts of freshwater salinization.

Science of the Total Environment↗

The impact of buffer strips and stream-side grazing on small mammals in southwestern Wisconsin

The practice of continuously grazing cattle along streams has caused extensive degradation of riparian habitats. Buffer strips and managed intensive rotational grazing (MIRG) have been proposed to protect and restore stream ecosystems in Wisconsin. However, the ecological implications of a switch from traditional livestock management to MIRG or buffer strip establishment have not been investigated. Differences in small mammal communities associated with riparian areas on continuously grazed and MIRG pastures, as well as vegetative buffer strips adjacent to row crops, were investigated in southwestern Wisconsin during May-September 1997 and 1998. More species (mean of 6-7) were found on the buffer sites than on the pasture sites (mean of 2-5). Total small mammal abundance on buffer sites was greater than on the pastures as well: there were 3-5 times as many animals on the buffer sites compared to the pasture sites, depending on year. There were no differences in species richness or total abundance between MIRG and continuously grazed pastures in either year. Total small mammal abundance was greater near the stream than away from the stream, regardless of farm management practice but there were no differences in species richness. Buffer strips appear to support a particularly rich and abundant small mammal community. Although results did not detect a difference in small mammal use between pasture types, farm-wide implications of a conversion from continuous to MIRG styles of grazing may benefit small mammals indirectly by causing an increase in the prevalence of pasture in the agricultural landscape.

Agriculture, Ecosystems and Environment↗

Understanding how microbiomes influence the systems they inhabit

Translating the ever-increasing wealth of information on microbiomes (environment, host, or built environment) to advance the understanding of system-level processes is proving to be an exceptional research challenge. One reason for this challenge is that relationships between characteristics of microbiomes and the system-level processes they influence are often evaluated in the absence of a robust conceptual framework and reported without elucidating the underlying causal mechanisms. The reliance on correlative approaches limits the potential to expand the inference of a single relationship to additional systems and advance the field. We propose that research focused on how microbiomes influence the systems they inhabit should work within a common framework and target known microbial processes that contribute to the system-level processes of interest. Here we identify three distinct categories of microbiome characteristics (microbial processes, microbial community properties, and microbial membership) and propose a framework to empirically link each of these categories to each other and the broader system level processes they affect. We posit that it is particularly important to distinguish microbial community properties that can be predicted from constituent taxa (community aggregated traits) from and those properties that are currently unable to be predicted from constituent taxa (emergent properties). Existing methods in microbial ecology can be applied to more explicitly elucidate properties within each of these categories and connect these three categories of microbial characteristics with each other. We view this proposed framework, gleaned from a breadth of research on environmental microbiomes and ecosystem processes, as a promising pathway with the potential to advance discovery and understanding across a broad range of microbiome science.

Nature Microbiology↗

A multistate dynamic site occupancy model for spatially aggregated sessile communities

Estimation of transition probabilities of sessile communities seems easy in principle but may still be difficult in practice because resampling error (i.e. a failure to resample exactly the same location at fixed points) may cause significant estimation bias. Previous studies have developed novel analytical methods to correct for this estimation bias. However, they did not consider the local structure of community composition induced by the aggregated distribution of organisms that is typically observed in sessile assemblages and is very likely to affect observations. We developed a multistate dynamic site occupancy model to estimate transition probabilities that accounts for resampling errors associated with local community structure. The model applies a nonparametric multivariate kernel smoothing methodology to the latent occupancy component to estimate the local state composition near each observation point, which is assumed to determine the probability distribution of data conditional on the occurrence of resampling error. By using computer simulations, we confirmed that an observation process that depends on local community structure may bias inferences about transition probabilities. By applying the proposed model to a real data set of intertidal sessile communities, we also showed that estimates of transition probabilities and of the properties of community dynamics may differ considerably when spatial dependence is taken into account. Results suggest the importance of accounting for resampling error and local community structure for developing management plans that are based on Markovian models. Our approach provides a solution to this problem that is applicable to broad sessile communities. It can even accommodate an anisotropic spatial correlation of species composition, and may also serve as a basis for inferring complex nonlinear ecological dynamics.

Methods in Ecology and Evolution↗

Patterns and controlling factors of species diversity in the Arctic Ocean

Aim The Arctic Ocean is one of the last near-pristine regions on Earth, and, although human activities are expected to impact on Arctic ecosystems, we know very little about baseline patterns of Arctic Ocean biodiversity. This paper aims to describe Arctic Ocean-wide patterns of benthic biodiversity and to explore factors related to the large-scale species diversity patterns. Location Arctic Ocean. Methods We used large ostracode and foraminiferal datasets to describe the biodiversity patterns and applied comprehensive ecological modelling to test the degree to which these patterns are potentially governed by environmental factors, such as temperature, productivity, seasonality, ice cover and others. To test environmental control of the observed diversity patterns, subsets of samples for which all environmental parameters were available were analysed with multiple regression and model averaging. Results Well-known negative latitudinal species diversity gradients (LSDGs) were found in metazoan Ostracoda, but the LSDGs were unimodal with an intermediate maximum with respect to latitude in protozoan foraminifera. Depth species diversity gradients were unimodal, with peaks in diversity shallower than those in other oceans. Our modelling results showed that several factors are significant predictors of diversity, but the significant predictors were different among shallow marine ostracodes, deep-sea ostracodes and deep-sea foraminifera. Main conclusions On the basis of these Arctic Ocean-wide comprehensive datasets, we document large-scale diversity patterns with respect to latitude and depth. Our modelling results suggest that the underlying mechanisms causing these species diversity patterns are unexpectedly complex. The environmental parameters of temperature, surface productivity, seasonality of productivity, salinity and ice cover can all play a role in shaping large-scale diversity patterns, but their relative importance may depend on the ecological preferences of taxa and the oceanographic context of regions. These results suggest that a multiplicity of variables appear to be related to community structure in this system.

Journal of Biogeography↗

Use of a wetland index to evaluate changes in riparian vegetation after livestock exclusion

A method was developed to characterize ecological integrity of riparian sites based on the abundance of hydric species. This wetland index can be calculated with species data, or with community type data as performed here. Classified riparian community types were used to describe vegetation at 14 livestock exclosures and adjacent grazed areas. Community type wetland index values were generated and used to calculate site wetland index values. It was hypothesized that removal of livestock would result in higher wetland index values because of release from herbivory and decreased physical disturbance of vegetation, streambanks, and soil. The wetland index for exclosures was about 12% higher than grazed sites; differences were statistically significant (p < 0.01) based on paired t-tests. The increase in hydric vegetation after livestock exclusion may have contributed to the greater bank stability (p = 0.002) and smaller width-to-depth ratio (p = 0.005) in exclosures. Challenges were encountered in using community types to describe and compare site vegetation, which could be avoided with species data collection. The wetland index can be a tool to monitor sites over time, compare sites with similar environments, or compare sites for which environmental differences can be accounted.

Journal of the American Water Resources Associatio↗

Kelp forest monitoring at Naval Base Ventura County, San Nicolas Island, California: Fall 2017 and Spring 2018, Fourth Annual Report

To assess and track changes to the rocky subtidal communities surrounding San Nicolas Island, the U.S. Navy entered into an agreement with the U.S. Geological Survey (USGS) in 2014 to conduct an ecological monitoring program at several sites around the island. Four permanent sites—Nav Fac 100, West End, Dutch Harbor, and Daytona 100—were established. The sites were based on ones that had been monitored since 1980 by USGS and were combined or expanded for better comparability with monitoring programs conducted at the other California Channel Islands. At the sites, scientists from USGS and our cooperator, the University of California, Santa Cruz, measured bottom cover of algae and sessile invertebrate species in quadrats, counted and sized fish on swimming transects, and counted a suite of kelps and invertebrates on benthic band transects. Holdfast diameter and number of stipes of giant kelp ( Macrocystis pyrifera ) were recorded on these transects, and size data were collected for urchins, sea stars, and shelled mollusks. Bottom temperatures were recorded at hourly intervals by archival data loggers that were deployed at the sites. This report focuses primarily on data collected in fall 2017 and spring 2018 and makes comparisons with data collected in previous years, beginning in fall 2014. Nav Fac 100 is a site with a relatively low benthic profile, situated on the north side of San Nicolas Island. It was previously urchin dominated but underwent a dramatic decline in purple sea urchins in 2015 and 2016. Since then, macroalgae has become more prevalent as both annual brown algae, such as Dictyota, and perennials (for example, Cystoseira ) have become established. The invasive brown alga Sargassum horneri has also become established. West End, on the southwest side of the island, also lacks much bottom relief but has more crevice habitat associated with boulders. It remains dominated by kelps and red algae, but red algae have decreased recently. Dutch Harbor, on the south side, has many high relief rocky reefs and had the greatest fish and non-motile invertebrate densities. It remains the most stable of the sites. Daytona 100, on the southeast side, has moderate relief and has remained a patchwork of kelp and urchin dominated areas with moderate fish density. The main change at the sites during the last 4 years was the decline in urchin numbers at Nav Fac 100. There was storm-related mortality and subsequent recruitment in the M. pyrifera population at several of the sites in both 2016 and 2017. The winter of 2018, however, was relatively mild, with less destructive storm-related disturbance. The invasive brown alga S. horneri , first seen at San Nicolas Island at Nav Fac 100 in fall 2015, has become firmly established there during the last 2 sampling years. Finally, moderate increases were observed in purple urchin densities at all sites this spring. Long-term data are presented to illustrate trends and changes over the past three decades. Results indicate continued monitoring to evaluate ecosystem effects from perturbations owing to natural processes and anthropomorphic factors, including recovery of the sea otter population, changes in fisheries, invasive species and changing environmental conditions, could be valuable to inform managers’ decision-making.

California↗

From bacteria to elephants: Effects of land-use legacies on biodiversity and ecosystem structure in the Serengeti-Mara ecosystem: Chapter 8

Generally, ecological research has considered the aboveground and belowground components of ecosystems separately. Consequently, frameworks for integrating the two components are not well developed. Integrating the microbial components into ecosystem ecology requires different approaches from those offered by plant ecology, partly because of the scales at which microbial processes operate and partly because of measurement constraints. Studies have begun to relate microbial community structure to ecosystem function. results suggest that excluding people and livestock from the MMNR, or preventing heavier livestock from grazing around settlements, may not change the general structure of the ecosystem (soils, plant structure), but can change the numbers and diversity of wildlife, nematodes and microbes in this ecosystem in subtle ways.

Book chapter↗