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Revised groundwater-flow model of the glacial aquifer system north of Aberdeen, South Dakota, through water year 2015

The city of Aberdeen, in northeastern South Dakota, requires an expanded and sustainable supply of water to meet current and future demands. Conceptual and numerical models of the glacial aquifer system in the area north of Aberdeen were developed by the U.S. Geological Survey in cooperation with the City of Aberdeen in 2012. The U.S. Geological Survey, in cooperation with the City of Aberdeen, completed a study to revise the original numerical groundwater-flow model using data through water year (WY) 2015 to aid the City of Aberdeen in their development of plans and strategies for a sustainable water supply and to increase understanding of the glacial aquifer system and groundwater-flow system near Aberdeen. The original model was revised to improve the fit between model-simulated values and observed (measured or estimated) data, provide greater insight into surface-water interactions, and improve the usefulness of the model for water-supply planning. The revised groundwater-flow model (hereafter referred to as the “revised model”) presented in this report supersedes the original model. The purpose of this report is to describe a revised groundwater-flow model including data collection, model calibration, and model results for the glacial aquifer system including the Elm, Middle James, and Deep James aquifers north of Aberdeen, South Dakota, using updated hydrologic data through WY 2015. The original numerical model was revised in several ways. The model was modified by adding four new layers, which included a surficial layer, two intervening confining layers, and a shale bedrock layer. The revised model provides an improved understanding of the groundwater-flow system in comparison to the original model. The principal aquifers of the model area include portions of the Elm, Middle James, and Deep James aquifers. The lithologic information used to define and describe the aquifers in the model area was unaltered; however, aquifer properties and boundary conditions were reviewed and updated using geological information reported by the South Dakota Department of Environmental and Natural Resources and information obtained from geophysical investigations for this study. The horizontal extent of the Elm, Middle James, and Deep James aquifers was unaltered from the original model. The thickness of the Deep James aquifer was modified based on interpretations from the geophysical investigations. In general, groundwater in the Elm aquifer flowed from northwest to southeast and locally towards rivers and streams. Similarly, in the Middle James and Deep James aquifers, groundwater also typically flowed southeast. The revisions made to the original model include use of the following MODFLOW stress packages: Recharge, Evapotranspiration, Time-Variant Specified Head, Wells, Drains, and Stream Flow Routing, all of which were updated from the original model except for the Stream Flow Routing Package, which replaced the River Package used in the original model. Model calibration is the process of estimating model parameters to minimize the differences, or residuals, between observed data and simulated values; therefore, Parameter ESTimation (PEST) software was used to optimize model input parameters by matching model-simulated values to observed data. Calibration parameters included horizontal hydraulic conductivity, vertical hydraulic conductivity, specific yield, specific storage, and vertical streambed conductance for stream and drain cells. Multipliers were used to calibrate the recharge and evapotranspiration stresses. Evapotranspiration extinction depth also was adjusted during model calibration. Comparisons to the original model are described to highlight the changes made in the revised model. In general, the revised model adequately simulates the natural system and compares favorably with observed hydrologic data. Simulated water levels were evaluated by comparing them to single water-level observations at selected well locations. The selected wells were the same wells used in the original model. The coefficient of determination value between simulated and observed water levels for the revised model was 0.89 and included simulated and observed values from October 1, 1974 (WY 1975), through September 30, 2015 (WY 2015). The coefficient of determination value for the original model was 0.94 and included simulated and observed values from October 1, 1974, through September 30, 2009. The difference may indicate that the original model could have been overfit to hydraulic head observations because base flow was not simulated. The additional data used in the revised model included some climatically wetter, more extreme periods, such as 2011, in which annual precipitation was 30.9 inches. Average annual precipitation for the original model timeframe, which included data from WYs 1975–2009, was 20.26 inches. Additional precipitation data for WYs 2010–15, included in the revised model timeframe, resulted in an average annual precipitation for WYs 1975–2015 in the model area of 20.6 inches. The larger variability in climate data coupled with the additional water-level data could explain the lower coefficient of determination for water levels in the revised model. The revised model was used to calculate various groundwater-budget components for steady-state and transient conditions for WYs 1975–2015. The time-variant specified-head cells in the revised model had the largest change when compared to the original steady-state model for inflows and outflows. Comparing the transient budget components between the original and the revised models indicated that inflow from recharge and time-variant specified-head cells had the greatest effect on groundwater inflows, and outflow from storage had the greatest effect on groundwater outflows. The simulated potentiometric contours from the revised model were compared with (1) the observed (interpreted) potentiometric surface (layer 2) and the hydraulic head values (layers 4 and 6) and (2) the simulated contours from the original model. The simulated hydraulic gradients and general direction of groundwater flow in the Elm aquifer in the revised model generally matched the observed potentiometric contours, the simulated potentiometric contours from the original model, and general flow directions interpreted to be perpendicular to the contours. Minor discrepancies between simulated potentiometric contours from the revised model and the observed potentiometric contours may be due to the lack of observed data in the model area. The revised model was designed to reduce the limitations of the original model. The revisions were validated by comparing the results of the original model with the revised model. A primary benefit of the revised model is the inclusion of the surficial deposits and the confining units as explicit layers in the model. The addition of the surficial layer was beneficial for three primary reasons: (1) more accurate representation of recharge from precipitation, (2) more accurate representation of groundwater evapotranspiration, and (3) more accurate representation of groundwater and surface-water interactions. The groundwater model is a numeric approximation of a complex physical hydrologic system, and the revised model data were interpolated in regions with sparse data. Additionally, model discretization included averaged and interpolated values for water use, withdrawal rates, and hydraulic conductivity. The revised model provides a useful estimate for hydraulic gradients, groundwater-flow directions, and aquifer response to groundwater withdrawals.

South Dakota↗

Estimation of base flow on ungaged, periodically measured streams in small watersheds in western Pennsylvania

A 2.5-year data collection program was undertaken by the U.S. Geological Survey, in cooperation with the Pennsylvania Department of Environmental Protection (PADEP), to quantify and estimate base flow in small watersheds in western Pennsylvania where only periodic streamflow measurements had been obtained. Twelve streamgages with watershed areas of less than 10 square miles were established in western Pennsylvania for this study, with most established within Greene and Washington Counties (an area where a type of underground coal mining known as longwall mining occurs). Data from five previously established streamgages with watershed areas ranging from 48.9 to 281 square miles were also used in the analyses for this study. The index-gage method was used to relate streamflow at one streamgage referred to as the “index streamgage” to streamflow at another site of interest (usually an ungaged site, but for this study another streamgage) using a regression technique. Streamflow regressions were developed for all newly established streamgages by using the Maintenance of Variance Extension, Type 1 (MOVE.1) method. Not all streamflow data from the newly established streamgages were used for MOVE.1 regression development; only data that have little to no influence from runoff were considered. Runoff-influenced streamflow for this study was defined as streamflow on a day that precipitation occurs plus streamflow on the following 2 days. One streamflow value per day selected from a specified schedule that captures numerous non-runoff periods was used to develop a MOVE.1 regression. Prediction limits were calculated from the regression to provide the upper and lower bounds for the regression-produced streamflow estimates. Using these data, base flow at a site can be estimated with the index-gage method. The log 10 -tranformed prediction interval width and other regression diagnostics were used as indicators of regression quality when comparing streamgage relations to determine the best index streamgage among the streamgages established for this study. It was determined that index streamgages within about 10 miles of the site of interest provided the best estimated base flow and could, in the future, be used by mine operators and the PADEP to quantify base flow and to evaluate the effects of mining on streamflow.

Pennsylvania↗

Regression models for estimating sediment and nutrient concentrations and loads at the Kankakee River, Shelby, Indiana, December 2015 through May 2018

The Kankakee River in northern Indiana flows through the area once known as the Grand Marsh. Beginning in the 1860s, anthropogenic changes to the river within Indiana resulted in downstream flooding and additional transport of sediment and nutrients. In 2015, the U.S. Geological Survey, in cooperation with the Indiana Department of Environmental Management, upgraded the gaging station Kankakee River at Shelby, Indiana, to include the collection of water-quality data. By relating continuously monitored water-quality data to discrete data collected from December 2015 through May 2018, linear regression was used to develop models for estimating concentrations of suspended sediment, total nitrogen, and total phosphorus. Developed regression models indicated a strong correlation between turbidity and specific conductance with suspended-sediment concentration (adjusted coefficient of determination equals 0.92, predicted residual error sum of squares equals 0.151), nitrate plus nitrite and specific conductance with total nitrogen (adjusted coefficient of determination equals 0.95, predicted residual error sum of squares equals 0.0248), and turbidity with total phosphorus (adjusted coefficient of determination equals 0.89, predicted residual error sum of squares equals 0.0103). Daily loads of suspended sediment, total nitrogen, and total phosphorus were computed as the product of daily mean regression model concentrations and daily mean streamflow. Rloadest models were used to compute daily loads of each constituent during gaps in regression model loads. For 2016 and 2017, the estimated annual suspended-sediment loads were 105,000 and 91,000 tons; estimated total nitrogen loads were 8,690 and 8,890 tons; and estimated total phosphorus loads were 265 and 236 tons, respectively.

Indiana↗

Quantification of trace element loading in the upper Tenmile Creek drainage basin near Rimini, Montana, September 2011

The principle sources of trace elements entering upper Tenmile Creek, Montana, during September 2011, four trace metals and the metalloid arsenic, were identified and quantified by combining and analyzing streamflow data determined from tracer injection with trace-element concentrations and related water-quality data determined from synoptic sampling. The study reach was along upper Tenmile Creek, beginning downstream from the city of Helena’s diversion and extending 5,020 feet downstream. Results from the 2011 study, completed by the U.S. Geological Survey in cooperation with the Montana Department of Environmental Quality, were compared to results from a similar study conducted in 1998 to assess the effectiveness of mine reclamation and remediation work to reduce trace-element loading to upper Tenmile Creek, which has been ongoing throughout the drainage basin. Main-stem concentrations of most trace elements analyzed were generally greater in 1998 than in 2011. However, the State of Montana human-health criteria for total-recoverable cadmium and arsenic were exceeded in parts of upper Tenmile Creek, and concentrations of cadmium and zinc exceeded the acute aquatic-life criteria at all main-stem sites during both studies. Total-recoverable copper concentrations observed in 2011 exceeded the chronic aquatic-life criterion upstream from the Lee Mountain adit, whereas, in 1998, all sites exceeded the acute aquatic-life criteria. Direct comparison of loads from the 1998 and 2011 tracer studies were complicated by the differences in hydrologic conditions. Streamflow in 1998 was about 10 percent of the 2011 streamflow. The Lee Mountain Mine and Susie Lode adit were identified as major contributors of trace elements to upper Tenmile Creek in both studies. However, trace-element loading from the Lee Mountain Mine area was substantially reduced between 1998 and 2011. Total-recoverable loads of all trace elements showed substantial loss in 1998 but increased in 2011 downstream from the Susie Lode adit to the end of the study reach. This reach was one of the primary sources of trace-element loading to upper Tenmile Creek in 2011. This difference indicated that the streambed may act as a sink or a source for trace elements, depending on hydrologic conditions.

Montana↗

Updating data inputs, assessing trends, and evaluating a method to estimate probable high groundwater levels in selected areas of Massachusetts

A method to estimate the probable high groundwater level in Massachusetts, excluding Cape Cod and the islands, was developed in 1981. The method uses a groundwater measurement from a test site, groundwater measurements from an index well, and a distribution of high groundwater levels from wells in similar geologic and topographic settings. The U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection, conducted an update to the Frimpter method for estimating the probable high groundwater levels in Massachusetts. The study evaluated the potential changes to the method resulting from four decades of additional groundwater-level data and the expansion of the network of wells for monitoring groundwater levels. The differences and potential benefits of daily, as opposed to monthly, measurements in the application of the method were examined because of the increased availability of high-frequency (subdaily) groundwater-level data. The study also considered long-term trends in groundwater levels that may alter the accuracy of the method. Finally, the accuracy of the estimated high groundwater levels was evaluated, and improved implementation guidance was prepared. For this study, groundwater levels in 153 wells in Massachusetts and surrounding States with records with lengths of 16 to 78 years were analyzed. The highest recorded groundwater levels ranged from 1.2 feet (ft) above land surface (flooded conditions) to 45.8 ft below land surface, with a median of 4.6 ft below land surface. The maximum annual groundwater-level range was 1.4 to 17.9 ft, with a median of 5.5 ft. The within-month variation, maximum annual groundwater-level range, and highest recorded groundwater level were computed using daily mean groundwater-level values from 28 wells with continuous records. The use of daily data resulted in larger maximum annual groundwater-level ranges (0.02 to 2.94 ft larger, with a median of 0.58 ft larger) and shallower highest-recorded groundwater levels (0.0 to 1.60 ft shallower, with a median of 0.18 ft shallower) than computations based on monthly measurements in the same wells. Statistical tests showed moderate to strong evidence of trends in measurements of both high and low groundwater levels within most of the periods during which water levels were analyzed. High groundwater levels rose beneath the land surface at most sites during four of the six periods used for analysis (1966–2015, 1986–2015, 1991–2010, and 1981–2010). Low groundwater levels also increased at many sites during most of the periods evaluated, but this trend was less widespread than the similar trends in high groundwater levels, and the trend was to deeper low groundwater levels at more sites than the trend to deeper high groundwater levels. There was no clear trend in annual groundwater-level ranges at most sites during the six periods analyzed. In general, the Frimpter method predicted shallower (higher) high groundwater levels than were observed but correctly classified sites according to their suitabilities for unmounded septic systems. The mean error of the predictions (difference between the estimated and observed groundwater levels) ranged from −3.23 ft to −1.40 ft for various approaches to estimating the groundwater-level range and selecting an index well. The method correctly classified 83 to 86 percent of monitoring-well sites according to their suitability for an unmounded septic system for many approaches to estimating the annual groundwater-level range and selecting an index well. The approach selected for estimating the annual groundwater-level range and selecting an index well will depend upon the importance of an accurate estimate of the high groundwater level as compared to the importance of an estimated high groundwater level that is less likely to be exceeded.

Connecticut, Massachusetts, New Hampshire, Rhode I↗

Hydrologic and ecological investigations in the School Branch watershed, Hendricks County, Indiana—Water years 2016–2018

School Branch in Hendricks County in central Indiana, is a small stream with a variety of agricultural and suburban land uses that drains into the Eagle Creek Reservoir, a major source of drinking water for Indianapolis, Indiana. The School Branch watershed has become the focus of a collaborative partnership of Federal, State, and local agencies; a university research center; and agricultural producers to understand the effects of land use and management practices on water quality and water quantity in the watershed. The U.S. Geological Survey, in cooperation with the Indiana Department of Environmental Management, contributed to the School Branch partnership with the operation of three streamgages (03353415 School Branch at Maloney Road near Brownsburg, Indiana; 03353420 School Branch at County Road 750 North at Brownsburg, Indiana; and 03353430 School Branch at Noble Drive at Brownsburg, Indiana) and the operation of a continuous water-quality gage (also known as a supergage) at County Road 750 North that measured dissolved oxygen, pH, temperature, specific conductance, turbidity, nitrate, and orthophosphate. Additional efforts included the use of passive samplers to identify wastewater indicators; assessment of fish and macroinvertebrate communities and stream habitat to identify ecological impairment; sampling for nutrients and sediment to estimate loads; and using major ions, stable isotopes and nested groundwater monitoring wells at County Road 750 North to determine hydrologic connectivity between the groundwater and surface water. The objectives of this study were to collect surface and groundwater data to analyze the hydrology and water quality within the watershed. Total nitrogen yields were highest at the upstream site, Maloney Road, and indicated a mixture of nitrogen sources in the watershed. Differences found in total nitrogen loading patterns throughout the watershed may be linked to differences in hydrology and land-use management from site to site. The groundwater and surface water were shown to be highly connected, and except for some low-flow periods, the water was flowing from groundwater to the stream for most of the study period. Fish and macroinvertebrate communities show improvement from upstream to downstream, with increases in diversity, richness, and species sensitive to poor water quality and habitat. These increases were most likely due to improved habitat quality at the downstream station.

Indiana↗

Hydrogeology of sand and gravel aquifers in the Owasco Inlet watershed, Cayuga and Tompkins Counties, New York

This study is a continuation of a series of hydrogeologic appraisals that have been conducted since 1980, as part of a cooperative, long-term, detailed aquifer mapping program by the U.S. Geological Survey and the New York State Department of Environmental Conservation. These appraisals provide a foundation for wellhead protection programs, water-resource management and planning decisions, and groundwater remediation in upstate New York. The Owasco Inlet watershed drains north directly to Owasco Lake, one of New York’s Finger Lakes. The watershed is similar in form to other watersheds of the Finger Lakes region of New York State and is characterized by broad, smooth uplands punctuated by the 18-mile-long Owasco Inlet valley and the secondary valleys of Decker, Dresserville, and Hemlock Creeks. All these streams occupy “through valleys”—the valleys are continuous into adjacent watersheds such that watershed divides are high points within the valley bottoms, rather than in uplands. Most glacial deposits in the watershed were deposited during the Valley Heads Readvance and subsequent retreat (with at least one minor readvance). Estimates are that the Valley Heads Readvance likely peaked in the Cayuga basin about 17,000 (calendar) years ago based on dates from western New York and the Mohawk Valley in east-central New York. It was the last major ice advance of the Pleistocene Epoch in this region. This readvance covered the entire Owasco watershed. Valley Heads ice in the Owasco watershed was part of the Cayuga ice lobe, which flowed parallel to the Owasco Inlet valley as far south as Moravia, but which became progressively more eastward south of Locke, effectively raking across the valley from the west. The Owasco Inlet watershed drains north, like other Finger Lakes watersheds, and during deglaciation, northward meltwater drainage was largely blocked by the ice, which resulted in development of a series of regional proglacial lakes in which fine lacustrine sediments predominated. Lacustrine sediments constitute much of the Owasco Inlet valley fill, but it has been pointed out that there are no obvious outlet channels exiting the Owasco Inlet watershed, and it has been proposed that there was northward drainage of meltwater into the ice within the larger, neighboring Cayuga Trough. The lacustrine deposits in the Owasco Inlet valley are commonly underlain by thinner coarse-grained stratified deposits (subaqueous fans and eskers) of variable sorting and permeability. An exception occurs at Groton, N.Y., where retreating ice paused long enough for coarse-grained sediments to fill much of the valley. Smaller, higher elevation valleys have a wider variety of glacial valley-fill deposits, ranging from fine lacustrine sediments to sand and gravel to till. Groundwater is the sole source of water supply in the area; glacial sand and gravel aquifers are the primary water source in the Owasco Inlet and Decker Creek valleys, and fractured bedrock aquifers typically supply domestic wells in the remaining valleys and upland areas. Municipal supplies tap a variety of aquifer types in the Owasco Inlet valley and nearby uplands. The hamlet of Locke taps the extensive confined aquifer beneath fine-grained lacustrine deposits in the valley. The Village of Moravia taps a semiconfined aquifer that overlies proglacial lake deposits and is partly confined by overlying recent lake deposits and alluvium. Withdrawals from this aquifer may also induce water from the Owasco Inlet into the aquifer. The Village of Groton draws from two aquifers: (1) a thin upland unconfined sand and gravel aquifer tapped by an infiltration gallery and (2) the local unconfined or semiconfined aquifer in the Owasco Inlet valley. Another aquifer with potential for municipal supply is the unconfined aquifer in the Decker Creek valley near Wilson Corners. The confined aquifer in the lower Dresserville Creek valley may have some water-resource potential, but it is largely untested. Unconfined aquifers are the most susceptible to contamination from activities at land surface directly above the aquifer because precipitation and subsequent recharge can transport contaminants directly to the water table. Adjacent upland areas can also contribute contaminants. Confined aquifers are less susceptible to contamination from overlying land surface areas because confining units largely prevent downward movement of water. Recharge occurs elsewhere at unconfined upvalley locations and along valley walls where alluvial fans, ice-contact deposits, or stream incision into the valley wall may provide pathways for downward movement of groundwater.

New York↗

Water-quality monitoring strategy for Mount Hope Bay and the Taunton River Estuary, southeastern Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection (MassDEP), began a study in 2018 to develop a water-quality monitoring strategy (WQMS) for Mount Hope Bay and the Taunton River Estuary in southeastern Massachusetts. MassDEP is interested in water-quality data in Mount Hope Bay and the Taunton River Estuary to characterize current water-quality conditions, assess nutrient-related effects, and capture conditions before and after planned upgrades to wastewater treatment facilities. The WQMS provides an overview of the environmental setting of Mount Hope Bay and the Taunton River Estuary and of dissolved oxygen and nutrient-related water-quality issues, reviews historical and existing monitoring data, and provides recommendations for future monitoring designed to meet five MassDEP management objectives: (1) support MassDEP’s review of coastal and marine dissolved oxygen criteria, (2) assess conditions within MassDEP waterbody assessment units in Mount Hope Bay and the Taunton River Estuary with respect to selected criteria in the Massachusetts Surface Water Quality Standards, (3) assess conditions along the freshwater/saltwater interface (salt wedge) of the Taunton River Estuary and delineate the boundary between the freshwater and saltwater waterbody assessment units, (4) estimate data requirements needed to determine nutrient loads flowing into Mount Hope Bay and the Taunton River Estuary, and (5) evaluate data requirements needed to support hydrodynamic and water-quality models for Mount Hope Bay and the Taunton River Estuary. This WQMS may be used by MassDEP to develop a statewide approach for monitoring estuaries in Massachusetts.

Massachusetts↗

Assessment of natural gas pipeline construction on stream temperature and turbidity in southwestern Virginia, 2017–25

Despite the extensive natural gas pipeline network in the United States that intersects streams and other sensitive habitats, few case studies use a comparative upstream-to-downstream approach to evaluate potential short- and long-term effects of pipeline stream crossings from pre-construction through post-restoration. In 2017, the U.S. Geological Survey, in cooperation with the Virginia Department of Environmental Quality, deployed real-time continuous stream monitoring stations upstream and downstream from six proposed Mountain Valley Pipeline stream crossings in southwestern Virginia. Water temperature and turbidity data collected at the upstream and downstream sites were compared across three periods—before stream crossing construction, during stream crossing construction, and after stream crossing construction—to determine potential influences from the pipeline stream crossing. Additionally, the monitoring network was used to notify regulators of potentially anomalous conditions throughout the entire monitoring period. The results of this study indicate that pipeline stream crossing did not affect long-term or short-term upstream-to-downstream water temperature conditions or long-term upstream-to-downstream turbidity conditions in any of the six monitored streams. Some short-term anomalously elevated turbidity conditions were observed and attributable to pipeline stream crossing; however, the magnitudes and durations were not sufficient to alter the long-term turbidity regimes of the streams in which they were observed. The application of the monitoring network as a real-time alert system successfully alerted regulators to potentially anomalous conditions.

Virginia↗

Phosphorus concentrations and loads in two Mississippi Alluvial Plain watersheds following nutrient reduction efforts during 2010–22

The Mississippi Alluvial Plain ecoregion in Mississippi was historically part of the largest continuous wetland in North America but was clearcut and converted to row crop agriculture beginning in the late 1800s. To reduce the effects of agriculture on surface waters in the Mississippi Alluvial Plain, nutrient reduction best management practices have been implemented throughout the region, particularly in two small watersheds: Harris Bayou watershed (174.04 square kilometers) and Porter Bayou watershed (267.15 square kilometers). Since 2009, the U.S. Geological Survey, in cooperation with the Mississippi Department of Environmental Quality, has collected water-quality samples monthly and during high-flow runoff events, at three locations within each watershed to monitor and assess nutrient trends following best management practice implementation. Here, we have analyzed long-term and seasonal trends in discharge, total nitrogen (TN), and total phosphorus (TP) concentrations and loads using a combination of quantile-Kendall analysis, quantile regression, generalized additive models, and weighted regression on time, discharge, and season. In Harris Bayou watershed, discharge values at a ~0.4–0.5 daily nonexceedance probability increased by 15 percent per year at the uppermost monitoring site. Additionally, TN concentrations decreased throughout the watershed over time, particularly in the spring and winter months. Reductions in TP were less apparent and only observed at one sampling location in Harris Bayou watershed. Nutrient concentrations in Porter Bayou watershed remained consistent over time and increased at one sampling location. However, despite discrepancies in concentration trends, flow-normalized TN and TP loads consistently decreased over time in both watersheds. At the mouth of both watersheds, peak TN and TP loads decreased between 37.7 and 56.9 percent. Collectively, these results provide evidence that best management practices may help reduce the effect of agricultural practices in the region, particularly in Harris Bayou watershed. Additionally, management efforts resulted in greater reductions in TN concentrations than in TP concentrations.

Scientific Investigations Report↗

Variability of discharge, nutrients, and Escherichia coli from tile drains in a small agricultural stream, a synoptic study in the School Branch watershed, Hendricks County, Indiana

The U.S. Geological Survey, in cooperation with the Indiana Department of Environmental Management, sampled a 1-mile stream reach of School Branch in Hendricks County, Indiana. Sampling consisted of 24 tile drain sites and surface-water sites both upstream and downstream from the tile drains. This study intended to (1) assess the variability of discharge, nutrients, and Escherichia coli ( E. coli ) among tiles within a stream reach in variable conditions; (2) define how the tiles affect the stream hydrology and water quality; and (3) determine potential management implications. Samples were collected on three dates—round 1 on June 12, 2018, after fertilizer was applied; round 2 on September 11, 2018, in fall harvest conditions; and round 3 on April 16, 2019, before fertilizer was applied—to encompass differing precipitation events, multiple seasons, and field conditions. Sites were sampled for water-quality parameters, dissolved and total nutrients (ammonia, nitrate plus nitrite, total nitrogen, orthophosphate, and total phosphorus), E. coli , and instantaneous discharge. Instantaneous nutrient loads were calculated from tiles and at the upstream and downstream surface-water sites. Nutrient concentrations and instantaneous loads varied depending on the tile and the sampling date. Tiles contributed between 26.5 and 66.0 percent of increased discharge between the surface-water sites. Tiles contributed between 34.7 and 87.4 percent and between 19.7 and 65.9 percent of the increased total nitrogen and phosphorus loads, respectively, for the downstream site relative to the upstream site. Most of the total nitrogen and total phosphorus from the tiles was in the dissolved forms (nitrate plus nitrite and orthophosphate). Surface-water samples had a nitrate plus nitrite to total nitrogen ratio of 71 to 93 percent, with an average of 82 percent; tile samples ranged from 44 to nearly 100 percent, with an average of 91 percent dissolved nitrogen. Surface-water samples had an orthophosphate to total phosphorus ratio of 30 to 65 percent, with an average of 53 percent; tile samples ranged from 32 to nearly 100 percent, with an average of 85 percent dissolved phosphorus. E. coli was detected in all but 5.79 percent of tile and surface-water samples. The E. coli results indicated the possibility of human or animal fecal contamination by way of septic systems leaking or directly linked to the tiles draining into the study area. Consequently, five microbial source tracking samples were collected from the upstream and downstream surface-water sites between August 3, 2021, and May 18, 2022. Human, canine, ruminant, and avian sources of fecal contamination were evaluated. The microbial source tracking samples indicated that human-specific sources are likely consistently contributing to elevated fecal contamination. Differences in discharge, nutrient concentrations, nutrient loads, and E. coli concentrations show that many factors affect how tiles alter the hydrology and water quality of receiving waters. The timing and severity of precipitation events, season, and the antecedent conditions of the field or watershed before sampling can affect the results. Tiles with the largest discharge rate had the most potential effect on the water quality and quantity of the stream. Targeting high-flowing tiles may affect efforts to improve overall water quality.

Indiana↗

Geohydrology and limnology of Walden Pond, Concord, Massachusetts

The trophic ecology and ground-water contributing area of Walden Pond, in Concord and Lincoln, Mass., were investigated by the U.S. Geological Survey in cooperation with the Massachusetts Department of Environmental Management from April 1997 to July 2000. Bathymetric investigation indicated that Walden Pond (24.88 hectares), a glacial kettle-hole lake with no surface inlet or outlet, has three deep areas. The maximum depth (30.5 meters) essentially was unchanged from measurements made by Henry David Thoreau in 1846. The groundwater contributing area (621,000 square meters) to Walden Pond was determined from water-table contours in areas of stratified glacial deposits and from land-surface contours in areas of bedrock highs. Walden Pond is a flow-through lake: Walden Pond gains water from the aquifer along its eastern perimeter and loses water to the aquifer along its western perimeter. Walden Pond contributing area also includes Goose Pond and its contributing area. A water budget calculated for Walden Pond, expressed as depth of water over the lake surface, indicated that 45 percent of the inflow to the lake was from precipitation (1.215 meters per year) and 55 percent from ground water (1.47 meters per year). The groundwater inflow estimate was based on the average of two different approaches including an isotope mass-balance approach. Evaporation accounted for 26 percent of the outflow from the lake (0.71 meters per year) whereas lake-water seepage to the groundwater system contributed 74 percent of the outflow (1.97 meters per year). The water-residence time of Walden Pond is approximately 5 years. Potential point sources of nutrients to ground water, the Concord municipal landfill and a trailer park, were determined to be outside the Walden Pond groundwater contributing area. A third source, the septic leach field for the Walden Pond State Reservation facilities, was within the groundwater contributing area. Nutrient budgets for the lake indicated that nitrogen inputs (858 kilograms per year) were dominated (30 percent) by plume water from the septic leach field and, possibly, by swimmers (34 percent). Phosphorus inputs (32 kilograms per year) were dominated by atmospheric dry deposition, background ground water, and estimated swimmer inputs. Swimmer inputs may represent more than 50 percent of the phosphorus load during the summer. The septic-system plume did not contribute phosphorus, but increased the nitrogen to phosphorus ratio for inputs from 41 to 59, on an atom-to-atom basis. The ratio of nitrogen to phosphorus in input loads and within the lake indicated algal growth would be strongly phosphorus limited. Nitrogen supply in excess of plant requirements may mitigate against nitrogen fixing organisms including undesirable blooms of cyanobacteria. Based on areal nutrient loading, Walden Pond is a mesotrophic lake. Hypolimnetic oxygen demand of Walden Pond has increased since a profile was measured in 1939. Currently (1999), the entire hypolimnion of Walden Pond becomes devoid of dissolved oxygen before fall turnover in late November; whereas historical data indicated dissolved oxygen likely remained in the hypolimnion during 1939. The complete depletion of dissolved oxygen likely causes release of phosphorus from the sediments. Walden Pond contains a large population of the deep-growing benthic macro alga Nitella, which has been hypothesized to promote water clarity in other clear-water lakes by sequestering nutrients and keeping large areas of the sediment surface oxygenated. Loss of Nitella populations in other lakes has correlated with a decline in water quality. Although the Nitella standing crop is large in Walden Pond, Nitella still appears to be controlled by nutrient availability. Decreasing phosphorus inputs to Walden Pond, by amounts under anthropogenic control would likely contribute to the stability of the Nitella population in the metalimnion, may reverse oxygen depletion in the hypolimnion, and decreas

Water-Resources Investigations Report↗

Relation between selected well-construction characteristics and occurrence of bacteria in private household-supply wells, south-central and southeastern Pennsylvania

Total coliform and Escherichia coli ( E. coli ) bacteria were analyzed in ground water sampled from 78 private household-supply wells as part of a study by the U.S. Geological Survey in cooperation with the Pennsylvania Department of Environmental Protection to evaluate the relation between well construction characteristics and the occurrence of bacteria in ground water. Sampling was done in eight counties in south-central and southeastern Pennsylvania from September 2000 to March 2001. All samples were collected from wells in close proximity to agricultural land-use areas. Total coliform bacteria were found in water from 62 percent (48 of 78) of the wells, and bacteria were just as likely to be found in sanitary wells (grouted/loose-fitting well cap or grouted/sanitary sealed well cap) as in nonsanitary wells (nongrouted/ loose-fitting well cap). The areas underlain by carbonate bedrock had the highest percentages of total coliform detected (about 75 percent). Nearly half of the samples collected in the areas underlain by noncarbonate bedrock also were found to have total coliform present. E. coli bacteria were found in water from 10 percent of the wells. Seventeen percent of the samples that were positive for total coliform also were positive for E. coli . The presence of E. coli bacteria was more likely in water from nonsanitary wells. Additionally, the presence of E. coli bacteria was more likely in ground water from wells underlain by carbonate bedrock. A further breakdown of the data into four groups on the basis of sanitary construction and bedrock type indicated the presence of E. coli was more likely in water from nonsanitary wells in areas underlain by carbonate bedrock. Statistical analysis of other well-construction characteristics that might relate to occurrence of bacteria showed that the presence of total coliform bacteria was related to the depth to water-bearing zone in both sanitary and nonsanitary wells in areas underlain by carbonate bedrock. Relations also are present between the presence of total coliform bacteria and casing length in nonsanitary wells in areas underlain by noncarbonate bedrock. Bacteria were found in wells both with and without insects observed on the underside of the well cap. Because of the small number of wells sampled that had sanitary sealed caps, it is uncertain whether installation of sanitary sealed well caps would reduce the incidence of bacteria in ground water from wells or if the presence of bacteria is because of a combination of well-construction characteristics or aquifer-wide contamination of limited or broad areal extent.

Pennsylvania↗

Microbiological quality of water from noncommunity supply wells in carbonate and crystalline aquifers of Pennsylvania

Samples were collected from 59 noncommunity water supplies in the Commonwealth of Pennsylvania from September 2000 to January 2001 and analyzed for pathogens and microbiological indicator organisms. The pathogens sampled were culturable viruses and Helicobacter pylori (H. pylori). The indicator organisms sampled were total coliform, Escherichia coli ( E. coli ), Clostridium perfringens ( C. perfringens ), somatic coliphage, male- specific coliphage, and enterococcus. The two primary areas sampled for the project completed by the U.S. Geological Survey, in cooperation with the Pennsylvania Department of Environmental Protection (PaDEP), were carbonate aquifers and crystalline aquifers. The results of all sampling showed culturable viruses were detected in 8 percent of the wells, H. pyloriin 7 percent of the wells, E. coli in 12 percent of the wells, total coliform in 46 percent of the wells, C. perfringens in 15 percent of the wells, somatic coliphage in 8 percent of the wells, male-specific coliphage in 5 percent of the wells, and enterococcus in 14 percent of the wells. Carbonate aquifers tended to have higher detection rates for the pathogens and indicators sampled than the crystalline aquifers. Detections of the pathogens and indicator organisms were not related statistically to the amounts of urban, agricultural, or forested area in a 1,500-foot radius around the sampled well. Somatic and male-specific coliphage showed the best relation to occurrence of culturable viruses. Culturable viruses and H. pylori were detected in wells in which no indicator organisms were present; therefore, none of the indicator organisms sampled provide complete assurance of pathogenfree water. The best predictive tool for virus screening was a combination of indicator organisms.

Water-Resources Investigations Report↗

Assessment of fish assemblages and minimum sampling effort required to determine botic integrity of large rivers in southern Idaho, 2002

A critical issue surrounding biomonitoring in large rivers (fifth- through seventh-order) is the minimum sampling-reach distance required to collect an adequate number of fish to represent the fish assemblage within a reach. Excessive sampling effort (excessive reach length) is costly in terms of work hours, reduces the number of sites that can be visited, can compromise field-crew safety, can be logistically unfeasible, and can cause unnecessary injury to captured fish. On the other hand, inadequate sampling effort can produce considerable variability in multiple samples collected at a site and may underrepresent the species or river condition present. During the summer of 2002, the U.S. Geological Survey, in cooperation with the Idaho Department of Environmental Quality, determined the minimum sampling effort required to characterize fish assemblages at 17 large-river sites in southern Idaho. The study was done as part of the U.S. Environmental Protection Agency's Environmental Monitoring and Assessment Program. Electrofishing methods and multiple gear types were used to collect sample populations of fish in river reach lengths representing 40 and 100 times the wetted channel width. Minimum sampling effort was assessed by comparing the relation between reach length and the number of species collected, total individuals collected, and final Index of Biotic Integrity (IBI) scores. Thirty-two species of fish in the families Catostomidae, Centrarchidae, Cottidae, Cyprinidae, Ictaluridae, Percidae, and Salmonidae were collected. Of these, 12 alien species were collected, representing about 38 percent of all species collected during the study. Wetted channel width was determined to be sufficient for collecting an adequate number of fish to estimate species richness and evaluate biotic integrity. At most sites, about 250 fish were needed to effectively represent 95 percent of the species present. Fifty-three percent of the sites assessed, using an IBI developed specifically for large Idaho rivers, received scores of less than 50, indicating poor biotic integrity.

Idaho↗

Organic carbon trends, loads, and yields to the Sacramento-San Joaquin Delta, California, water years 1980 to 2000

Organic carbon, nutrient, and suspended sediment concentration data were analyzed for the Sacramento and San Joaquin River Basins for the period 1980-2000. The data were retrieved from three sources: the U.S. Geological Survey's National Water Information System, the U.S. Environmental Protection Agency's Storage and Retrieval System, and the California Interagency Ecological Program's relational database. Twenty sites were selected, all of which had complete records of daily streamflow data. These data met the minimal requirements of the statistical programs used to estimate trends, loads, and yields. The seasonal Kendall program was used to estimate trends in organic carbon, nutrient, and suspended sediment. At all 20 sites, analyses showed that in the 145 analyses for the seven constituents, 95 percent of the analyses had no significant trend. Dissolved organic carbon (DOC) concentrations were significant only for four sites: the American River at Sacramento, the Sacramento River sites near Freeport, Orestimba Creek at River Roads near Crows Landing, and the San Joaquin River near Vernalis. Loads were calculated using two programs, ESTIMATOR and LOADEST2. The 1998 water year was selected to describe loads in the Sacramento River Basin. Organic carbon, nutrient, and suspended sediment loads at the Sacramento River sites near Freeport included transported loads from two main upstream sites: the Sacramento River at Verona and the American River at Sacramento. Loads in the Sacramento River Basin were affected by the amount of water diverted to the Yolo Bypass (the amount varies annually, depending on the precipitation and streamflow). Loads at the Sacramento River sites near Freeport were analyzed for two hydrologic seasons: the irrigation season (April to September) and the nonirrigation season (October to March). DOC loads are lower during the irrigation season then they are during the nonirrigation season. During the irrigation season, water with low concentrations of DOC is released from reservoirs and used for irrigation. On the other hand, during the nonirrigation season, streamflow results from surface water runoff and has higher concentrations of organic carbon, nutrients, and suspended sediment. The 1986 and 1987 water years were selected to describe loads in the San Joaquin River Basin. Organic carbon, nutrient, and suspended sediment loads in the San Joaquin River near Vernalis included transported loads from upstream sites, such as the Mud and Salt Sloughs, the Merced River at River Roads Bridge near Newman, the Tuolumne River at Modesto, and the Stanislaus River at Ripon. Loads at the San Joaquin River near Vernalis also were analyzed for the two seasons. The DOC load for the San Joaquin River at Vernalis is slightly higher during the irrigation season. Yields were calculated in an attempt to rank the subbasins in the Sacramento and San Joaquin River Basins. Five sites delivered streamflow from agricultural and urban sources that had relatively high yields of organic carbon: Sacramento Slough near Knights Landing, Arcade Creek near Del Paso Heights, Salt Slough, Mud Slough, and Colusa Basin Drain at Road 99E near Knights Landing.

California↗

An evaluation of water-quality data from Hydrologic Accounting Unit 051100, Green River Basin, Kentucky

Streamflow and water quality data collected by the U.S. Geological Survey (USGS) and the Kentucky Natural Resources and Environmental Protection Cabinet from 37 sites in the Green River basin were compared to data from the USGS National Stream Quality Accounting Network (NASQAN) Station, Green River near Beech Grove, Kentucky. This comparison was used to determine variability of water quality data throughout the basin, and to determine if water quality data from the NASQAN station were representative of water quality data upstream. Water quality concentrations, yields, and trends were studied. Water quality data from the NASQAN station were fairly representative conditions throughout the basin for specific conductance, pH, phosphorus and nitrogen, but were not representative for chloride, sulfate, iron, and water temperature. Water quality characteristics which were not representative can generally be attributed to impacts of specific land uses such as coal mining or oil production. Mean concentrations of suspended sediment were similar, but extreme concentrations varied throughout the basin. There were no temporal trends detected in instantaneous streamflow, sulfate, or total iron concentrations. Specific conductance was increasing at three stations and decreasing at one, chloride was increasing at two stations and decreasing at one, phosphorus was increasing at two stations, dissolved iron was increasing at one station and decreasing at one, pH was increasing at three stations and decreasing at two, suspended sediment was increasing at one station and decreasing at one, and water temperature was decreasing at two stations. The NASQAN station had increasing trends in chloride, phosphorus, pH, and suspended sediment, and a decreasing trend in water temperature with time. (Author 's abstract)

Water-Resources Investigations Report↗

Suspended-sediment yields from an unmined area and from mined areas before and after reclamation in Pennsylvania, June 1978-September 1983

The U.S. Geological Survey, in cooperation with the Pennsylvania Department of Environmental Resources, has collected hydrologic data from areas in Tioga, Clearfield, and Fayette Counties to determine the effects of surface coal mining on sediment yields. The data were collected from June 1978 through September 1983. Rainfall, streamflow and suspended-sediment data were collected with automatic recording and sampling equipment. Data were collected in Tioga County from an agricultural area that was unaffected by mining and from a forested area prior to surface mining. Data were collected from two areas affected by active surface mining in Tioga County and from an area in Clearfield County being mined by the contour-surface method. Data also were collected from three areas, Tioga, Clearfield, and Fayette Counties, during and after reclamation. The efficiencies of sediment-control pounds in Clearfield and Fayette Counties also were determined. The average annual sediment yield from the agricultural area in Tioga County, which was 35 percent forested, was 0.48 ton per acre per year, and the yield from the forested area prior to mining was 0.0036 ton per acre per year. The average annual sediment yields from the areas affected by active surface mining were 22 tons per acre from the improved haul road and 148 tons per acre from the unimproved haul road. The average annual sediment yield from the site in Clearfield County that had been prepared for mining was 6.3 tons per acre. The average annual sediment yield from the same site while it was being mined by the contour method was 5.5 tons per acre per year. The sediment-control pond reduced the average annual sediment yield to 0.50 ton per acre while the site was prepared for mining and to 0.14 ton per acre while the site was being mined. Because the active surface mining reduced the effective drainage area to the pond, the sediment yield decreased from 0.50 to 0.14 ton per acre. Average annual suspended-sediment yields from the reclaimed site in Tioga County were 1.0 ton per acre during the first year, when vegetation was becoming established, and 0.037 ton per acre during the second year, when vegetation was well established. The average annual sediment yield below a 21.2-acre, reclaimed, surface mine in Clearfield County that had been mined by the contour method was 15 tons per acre during the first year when vegetation was becoming established. However, the average annual sediment yield below a sediment-control pond at this reclaimed site in Clearfield County was 0.30 ton per acre. Data collected from a 4.2-acre reclaimed area that had been surface mined by the block-cut method in Fayette County showed that annual sediment yields from the area were 77 tons per acre in 1981 (no vegetation), 32 tons per acre in 1982 (sparse vegetation), and 1.0 ton per acre in 1983 (well-esatablished vegetation). The average annual yield below a sediment-control pond at the mine site in Fayette County was 0.19 ton per acre during the 27 months of data collection.

Water-Resources Investigations Report↗