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At least 1,027 records · Page 57Linked to original sources
USGS2026

Society’s struggle with unwanted species: What centuries of history reveal about species bounty programs

Species bounty programs, much like bounty hunters charged to bring fugitives to justice, enlist the public to locate and remove unwanted species through financial incentives. With the goal of reducing population sizes, these programs address perceived ecological and economic damage caused by target species. In this study, we provide the first global assessment of species bounty programs, drawing on evidence from both historical and contemporary efforts across diverse regions and cultural contexts over the past eight centuries. We uncovered a long history of bounty programs involving at least 283 species—mammals, birds, fish, plants, reptiles, mollusks, insects, amphibians, and crustaceans—across 449 programs in 60 countries. Using this collective knowledge, we offer five perspectives on species bounty programs. First, bounty programs are launched for a variety of reasons, including economic (livestock, crops, fisheries, infrastructure), ecological (species, ecosystems), and social (human health) considerations related to unwanted species. Second, bounty programs vary in their design and implementation, ranging from well-planned operations with clear management and conservation objectives to ad hoc operations with limited articulation and investigation of project outcomes. Third, evidence points to unintended consequences, in which bounty programs result in the incidental removal of non-target species or in effects that may inadvertently benefit target species. Fourth, while not always the case, fraudulent activities have been reported, compromising the management outcomes of some programs. Fifth, public perception of bounty programs is highly dynamic and ensuring program engagement remains a persistent challenge. By reviewing the scattered narratives of past and present bounty programs globally, this review seeks to inform the evolving role of this management strategy.

npj Biodiversity↗
USGS2016

Oak mistletoe ( Phoradendron villosum ) is linked to microhabitat availability and avian diversity in Oregon white oak ( Quercus garryana ) woodlands

Mistletoes are parasitic or hemi-parasitic flowering plants that parasitize woody plants around the globe. Important food and cover resources provided by mistletoes have been related to strong patterns of positive association between wildlife diversity and mistletoe density. Mistletoes also create microhabitat features known to be important to wildlife by causing deformations in their host trees. However, links between availability of mistletoe-formed microhabitat and wildlife diversity has not been well studied. We investigated this relationship by quantifying microhabitat features and avian abundance and diversity related to infection by Oak Mistletoe (Phoradendron villosum) in Oregon White Oak (Quercus garryana). Q. garryana woodlands support several avian species of conservation concern, so an understanding of the influence of mistletoe on wildlife habitat is critical. Our results suggest that 1) structural heterogeneity within tree crowns; 2) avian species richness and abundance are positively associated with mistletoe load; and 3) P. villosum fruit, available is an important food for western bluebird (Sialia mexicana) and other wildlife in late autumn and early winter. If a goal of restoration is to maintain habitat for oak-associated bird species, managers should consider the retention of some oaks hosting mistletoe.

Oregon↗
USGS2012

Interseasonal movements of greater sage-grouse, migratory behavior, and an assessment of the core regions concept in Wyoming

Animals can require different habitat types throughout their annual cycles. When considering habitat prioritization, we need to explicitly consider habitat requirements throughout the annual cycle, particularly for species of conservation concern. Understanding annual habitat requirements begins with quantifying how far individuals move across landscapes between key life stages to access required habitats. We quantified individual interseasonal movements for greater sage-grouse (Centrocercus urophasianus; hereafter sage-grouse) using radio-telemetry spanning the majority of the species distribution in Wyoming. Sage-grouse are currently a candidate for listing under the United States Endangered Species Act and Wyoming is predicted to remain a stronghold for the species. Sage-grouse use distinct seasonal habitats throughout their annual cycle for breeding, brood rearing, and wintering. Average movement distances in Wyoming from nest sites to summer-late brood-rearing locations were 8.1 km (SE = 0.3 km; n = 828 individuals) and the average subsequent distances moved from summer sites to winter locations were 17.3 km (SE = 0.5 km; n = 607 individuals). Average nest-to-winter movements were 14.4 km (SE = 0.6 km; n = 434 individuals). We documented remarkable variation in the extent of movement distances both within and among sites across Wyoming, with some individuals remaining year-round in the same vicinity and others moving over 50 km between life stages. Our results suggest defining any of our populations as migratory or non-migratory is innappropriate as individual strategies vary widely. We compared movement distances of birds marked using Global Positioning System (GPS) and very high frequency (VHF) radio marking techniques and found no evidence that the heavier GPS radios limited movement. Furthermore, we examined the capacity of the sage-grouse core regions concept to capture seasonal locations. As expected, we found the core regions approach, which was developed based on lek data, was generally better at capturing the nesting locations than summer or winter locations. However, across Wyoming the sage-grouse breeding core regions still contained a relatively high percentage of summer and winter locations and seem to be a reasonable surrogate for non-breeding habitat when no other information exists. We suggest that conservation efforts for greater sage-grouse implicitly incorporate seasonal habitat needs because of high variation in the amount of overlap among breeding core regions and non-breeding habitat.

Wyoming↗
USGS2002

Avian species richness in different-aged stands of riparian forest along the middle Rio Grande, New Mexico

Riparian forests are important for maintaining vertebrate species richness in the southwestern United States, but they have become restricted in distribution due to both historical and current management practices. In order to counteract continued loss of this habitat, several mitigation programs were developed in the middle Rio Grande Valley of New Mexico. Three areas ranging from 50 to 140 ha were revegetated with native trees using pole planting and cattle exclosures, and changes in vegetation structure were quantified after 2, 3, and 5 years of growth. As expected, the older site contained the most heterogeneous mix of plant species and the greatest structural diversity. We compared year-round avian use of the revegetated sites with a mature cottonwood forest site of approximately 30 years of age. As the revegetated sites matured and salient habitat features changed, the population dynamics of individual avian species and patterns of guild structure varied. The older revegetated sites showed a greater similarity to the mature cottonwood site, suggesting that reclamation efforts established quality riparian habitats for birds in as little as 5 years. The revegetated sites appeared especially important for Neotropical-migrant birds. We suggest that a mosaic of riparian woodlands containing mixtures of native tree and shrub species of different size classes is necessary to maintain avian species richness in the middle Rio Grande drainage, and probably throughout the southwestern United States.

New Mexico↗
USGS2025

Relative abundance, seasonal occurrence, and distribution of marine birds in the northern Gulf of Mexico

Marine birds in the U.S. Gulf of Mexico have long been poorly studied. Given statutory obligations to protect migratory birds and endangered species, three broad-scale vessel and aerial programs initiated since 2010 have now surveyed the entire northern Gulf. Vessel coverage alone exceeds 700 d and 74,000 km of observer effort using 300-m strip transects. We supplemented these survey data with earlier, smaller-scale studies, eBird checklists, literature reviews, and other less accessible sources to create snapshot summaries of relative abundance, seasonal occurrence, and regional distribution for 117 taxa of marine and water birds reported from the northern Gulf (113 of which were substantiated with physical evidence). Using taxonomic and functional criteria, we identified 56 taxa characteristic of open shelf, slope, and pelagic waters (federal jurisdiction), 41 taxa with primarily coastal affinities (state and federal jurisdiction), and 20 taxa of sea and diving ducks. High species richness of marine birds in the northern Gulf is attributed to (1) a temperate-to-tropical gradient facilitating diverse marine environments year-round; (2) varied geographic origins of marine bird species using the Gulf; and (3) a mostly enclosed sea basin acting as a vagrant trap for wide-ranging species. Our taxonomic list and status updates seek to bridge information gaps for marine birds now subject to accelerated commercial uses of this region's continental shelf, including newly proposed offshore wind energy development. Other applications include guiding risk and vulnerability assessments of Gulf marine birds, providing core content for seabird observer training, and prioritizing environmental impact reviews and monitoring programs in offshore energy construction and operations plans.

Marine Ornithology: Journal of Seabird Research an↗
USGS2012

Changing climate, changing forests: the impacts of climate change on forests of the northeastern United States and eastern Canada

Decades of study on climatic change and its direct and indirect effects on forest ecosystems provide important insights for forest science, management, and policy. A synthesis of recent research from the northeastern United States and eastern Canada shows that the climate of the region has become warmer and wetter over the past 100 years and that there are more extreme precipitation events. Greater change is projected in the future. The amount of projected future change depends on the emissions scenarios used. Tree species composition of northeast forests has shifted slowly in response to climate for thousands of years. However, current human-accelerated climate change is much more rapid and it is unclear how forests will respond to large changes in suitable habitat. Projections indicate significant declines in suitable habitat for spruce-fir forests and expansion of suitable habitat for oak-dominated forests. Productivity gains that might result from extended growing seasons and carbon dioxide and nitrogen fertilization may be offset by productivity losses associated with the disruption of species assemblages and concurrent stresses associated with potential increases in atmospheric deposition of pollutants, forest fragmentation, and nuisance species. Investigations of links to water and nutrient cycling suggest that changes in evapotranspiration, soil respiration, and mineralization rates could result in significant alterations of key ecosystem processes. Climate change affects the distribution and abundance of many wildlife species in the region through changes in habitat, food availability, thermal tolerances, species interactions such as competition, and susceptibility to parasites and disease. Birds are the most studied northeastern taxa. Twenty-seven of the 38 bird species for which we have adequate long-term records have expanded their ranges predominantly in a northward direction. There is some evidence to suggest that novel species, including pests and pathogens, may be more adept at adjusting to changing climatic conditions, enhancing their competitive ability relative to native species. With the accumulating evidence of climate change and its potential effects, forest stewardship efforts would benefit from integrating climate mitigation and adaptation options in conservation and management plans.

Connecticut;Labrador;Maine;Massachusetts;New Bruns↗
USGS2011

Chapter 2: Sagebrush-associated species of conservation concern

Selection of species of concern is a critical early step in conducting broad-scale ecological assessments for conservation planning and management. Many criteria can be used to guide this selection, such as conservation status, existing knowledge base, and association with plant communities of interest. In conducting the Wyoming Basins Ecoregional Assessment (WBEA), we followed a step-wise process to select vascular plant and vertebrate species of concern. Based on our selection process, we identified 65 taxa of sagebrush-associated ( Artemisia spp.) vascular plants of conservation concern. The vast majority were forbs, and nearly all are found in Wyoming (n = 59; 91%), reflecting its central location and spatial dominance (51%) of the study area. Forty-eight plants (74%) were ranked either S1 or S2 (state-level ranks indicating imperilment due to rarity, threats, or other factors) in at least one state within the assessment area. Forty vertebrates of concern were selected for our assessment, including 17 mammals, 18 birds, and 4 reptiles. Among these were 7 vertebrates commonly considered sagebrush-obligate species: sagebrush lizard ( Sceloporus graciosus ), greater sage-grouse ( Centrocercus urophasianus ), sage thrasher ( Oreoscoptes montanus ), sage sparrow ( Amphispiza belli ), Brewer’s sparrow (S pizella breweri ), pronghorn ( Antilocapra americana ), and pygmy rabbit ( Brachylagus idahoensis ). Several vertebrate species of concern in the Wyoming Basins are either rare or imperiled, including black-footed ferret ( Mustela nigripes ) and Wyoming pocket gopher ( Thomomys clusius ).

Wyoming↗
USGS2020

Examining the mechanisms of species responses to climate change: Are there biological thresholds?

Climate-change-driven shifts in distribution and abundance have been documented in many species. However, in order to better predict species responses, managers are seeking to understand the mechanisms that are driving these changes, including any thresholds that might soon be crossed. Leveraging the research that has already been supported by the Northeast Climate Adaptation Science Center and its partners, this project used the latest modeling techniques combined with robust field data to examine the impact of specific climate variables, land use change, and species interactions on the future distribution and abundance of species of conservation concern. Moreover, this project documented biological thresholds related to climate variability and change for critical species in the Northeastern and Midwestern U.S. Specifically, our objectives were to identify the primary drivers (climate change vs. urban growth) of species distribution changes in the Northeast; examine the nature of species landscape capability change over time to identify potential thresholds; determine how changing temperatures and snowpack characteristics will drive species interactions; analyze the sensitivity of tree and bird responses to the magnitude, variability, periodicity, and seasonality of temperature and precipitation under climate change in the eastern U.S.; and identify how discrete climate triggers such as extreme events will correlate with known biological thresholds. Major outcomes included 1) refining the understanding of the mechanisms that drive projected changes in the distribution of vulnerable populations; and 2) improving how these results are conveyed to stakeholders by identifying understandable responses in the form of thresholds.

Connecticut, Delaware, Illinois, Indiana, Iowa, Ke↗
USGS2012

Invasive species management restores a plant-pollinator mutualism in Hawaii

1.The management and removal of invasive species may give rise to unanticipated changes in plant–pollinator mutualisms because they can alter the composition and functioning of plant–pollinator interactions in a variety of ways. To utilize a functional approach for invasive species management, we examined the restoration of plant–pollinator mutualisms following the large-scale removal of an invasive nectar thief and arthropod predator, Vespula pensylvanica. 2.We reduced V. pensylvanica populations in large plots managed over multiple years to examine the response of plant–pollinator mutualisms and the fruit production of a functionally important endemic Hawaiian tree species, Metrosideros polymorpha. To integrate knowledge of the invader's behaviour and the plant's mating system, we determined the efficacy of V. pensylvanica as a pollinator of M. polymorpha and quantified the dependence of M. polymorpha on animal pollination (e.g. level of self-compatibility and pollen limitation). 3.The reduction of V. pensylvanica in managed sites, when compared to unmanaged sites, resulted in a significant increase in the visitation rates of effective bee pollinators (e.g. introduced Apis mellifera and native Hylaeus spp.) and in the fruit production of M. polymorpha. 4.Apis mellifera, following the management of V. pensylvanica, appears to be acting as a substitute pollinator for M. polymorpha, replacing extinct or threatened bird and bee species in our study system. 5.Synthesis and applications. Fruit production of the native M. polymorpha was increased after management of the invasive pollinator predator V. pensylvanica; however, the main pollinators were no longer native but introduced. This research thus demonstrates the diverse impacts of introduced species on ecological function and the ambiguous role they play in restoration. We recommend incorporating ecological function and context into invasive species management as this approach may enable conservation managers to simultaneously minimize the negative and maximize the positive impacts (e.g. taxon substitution) of introduced species. Such novel restoration approaches are needed, especially in highly degraded ecosystems.

Hawai'i↗
USGS2010

Effects of landscape features on waterbird use of rice fields

Literature is reviewed to determine the effects of landscape features on waterbird use of fields in regions where rice (Oryza sativa) is grown. Rice-growing landscapes often consist of diverse land uses and land cover, including rice fields, irrigation ditches, other agricultural fields, grasslands, forests and natural wetlands. Numerous studies indicate that local management practices, such as water depth and timing of flooding and drawdown, can strongly influence waterbird use of a given rice field. However, the effects of size and distribution of rice fields and associated habitats at a landscape scale have received less attention. Even fewer studies have focused on local and landscape effects simultaneously. Habitat connectivity, area of rice, distance to natural wetlands, and presence and distance to unsuitable habitat can be important parameters influencing bird use of rice fields. However, responses to a given landscape vary with landscape structure, scale of analysis, among taxa and within taxa among seasons. A lack of multi-scale studies, particularly those extending beyond simple presence and abundance of a given species, and a lack of direct tests comparing the relative importance of landscape features with in-field management activities limits understanding of the importance of landscape in these systems and hampers waterbird conservation and management.

Waterbirds↗
USGS2012

Hierarchical distance-sampling models to estimate population size and habitat-specific abundance of an island endemic

Population size and habitat-specific abundance estimates are essential for conservation management. A major impediment to obtaining such estimates is that few statistical models are able to simultaneously account for both spatial variation in abundance and heterogeneity in detection probability, and still be amenable to large-scale applications. The hierarchical distance-sampling model of J. A. Royle, D. K. Dawson, and S. Bates provides a practical solution. Here, we extend this model to estimate habitat-specific abundance and rangewide population size of a bird species of management concern, the Island Scrub-Jay ( Aphelocoma insularis ), which occurs solely on Santa Cruz Island, California, USA. We surveyed 307 randomly selected, 300 m diameter, point locations throughout the 250-km 2 island during October 2008 and April 2009. Population size was estimated to be 2267 (95% CI 1613-3007) and 1705 (1212-2369) during the fall and spring respectively, considerably lower than a previously published but statistically problematic estimate of 12 500. This large discrepancy emphasizes the importance of proper survey design and analysis for obtaining reliable information for management decisions. Jays were most abundant in low-elevation chaparral habitat; the detection function depended primarily on the percent cover of chaparral and forest within count circles. Vegetation change on the island has been dramatic in recent decades, due to release from herbivory following the eradication of feral sheep ( Ovis aries ) from the majority of the island in the mid-1980s. We applied best-fit fall and spring models of habitat-specific jay abundance to a vegetation map from 1985, and estimated the population size of A. insularis was 1400-1500 at that time. The 20-30% increase in the jay population suggests that the species has benefited from the recovery of native vegetation since sheep removal. Nevertheless, this jay's tiny range and small population size make it vulnerable to natural disasters and to habitat alteration related to climate change. Our results demonstrate that hierarchical distance-sampling models hold promise for estimating population size and spatial density variation at large scales. Our statistical methods have been incorporated into the R package unmarked to facilitate their use by animal ecologists, and we provide annotated code in the Supplement.

California↗
USGS2020

The abundance of Greater Sage-Grouse as a proxy for the abundance of sagebrush-associated songbirds in Wyoming, USA

Surrogate-species concepts are prevalent in animal conservation. Such strategies advocate for conservation by proxy, wherein one species is used to represent other taxa to obtain a conservation objective. The efficacy of such approaches has been rarely assessed empirically, but is predicated on concordance between the surrogate and sympatric taxa in distribution, abundance, and ecological requirements. Our objective was to identify whether the abundance of a high-profile umbrella species (Greater Sage-Grouse, Centrocercus urophasianus , hereafter sage-grouse) was associated with the abundance of six other members of the avian community for which it is presumed to be a surrogate, including three sagebrush-obligate and three sagebrush-associated songbird species. We predicted that sage-grouse abundance would align most closely with the breeding abundance of other sagebrush-obligate birds. We used two different indices of sage-grouse abundance for comparisons: field-collected counts of fecal pellets (primarily indexing abundance in the nonbreeding season) and a spatially explicit index of breeding population size. Neither index of sage-grouse abundance was consistently predictive of co-occurring songbird abundance, with one species more abundant (Horned Lark [ Eremophila alpestris ]) and one species less abundant (Vesper Sparrow [ Pooecetes gramineus ]) where sage-grouse pellet counts were higher, and no relationship evident between songbird abundance and the spatially explicit sage-grouse population index. Ours is one of few assessments of the efficacy of sage-grouse as a surrogate species to consider abundance, and not habitat overlap alone. We suggest that the utility of sage-grouse as a surrogate species likely varies across spatial scales. Within the scale examined here (10–15 ha sites), however, indices of sage-grouse abundance were unreliable proxies for the abundance of six declining songbird species.

Wyoming↗
USGS2010

Baseline survey for rare plant species and native plant communities within the Kamehameha Schools 'Lupea Safe Harbor Planning Project Area, North Kona District, Island of Hawai'i

Kamehameha Schools, in conjunction with several federal, state, and private organizations, has proposed to conduct conservation management on approximately 5,340 ha (~13,200 acres) of land they own in the vicinity of Kīpukalupea in the North Kona District on the island of Hawai'i. The goal of this program is to restore and enhance the habitat to benefit native plant and animal populations that are currently, or were formerly, found in this site. The initial phase of this project has been focused on various activities including conducting baseline surveys for bird and plant species so Kamehameha Schools could develop a Safe Harbor Agreement (SHA) for the proposed project lands relative to the habitat management and species reintroduction efforts they would like to conduct in the Lupea Project area. This report summarizes methods that were used to collect field data on plant species and communities within the project area, and the results of that initial survey. The information was used to calculate baseline values for all listed threatened or endangered plant species found, or expected to be found, within the project area, and to design a monitoring program to assess changes in plant communities and rare plant species relative to management activities over the duration of the SHA. The Lupea Project area contains excellent examples of several high elevation native plant communities including montane dry forest and woodland, native subalpine shrubland, and native grassland. Between November 2003 and January 2004 we sampled plant communities and species along seven transects established through the project area. A total of 109 plant species were found during this survey, within the transect grid and in nearby areas. Forty-four of these plants are endemic species, 21 are indigenous species, 43 are introduced, and one species is believed to have been introduced to Hawai„i by early Polynesian settlers. Only one federally listed Endangered plant, Asplenium peruvianum var. insulare , was found within the survey area. Additionally, we found one immature plant that may be Sicyos macrophyllus , a candidate species for listing. However, we were not able to make a definite determination of this species‟ identity since it did not have fruits or flowers. Finally, we documented four plant species within the survey area that have no official status designation but are considered to be rare and informally recognized as “species of concern” (SOC) as they appear to be declining in distribution and abundance statewide. These included Chamaesyce olowaluana, Eragrostis deflexa, Sisyrinchium acre, and Tetramolopium consanguineum . In addition to conducting field surveys, we performed a query on a spatial database developed by Dr. Jonathan Price of the University of Hawai„i at Hilo which models the potential range of all native Hawaiian plant species based on historic observations and a set of environmental parameters. The potential species list for the Lupea Project area includes 47 taxa that we did not find during our surveys, as well as three other listed species that were not modeled by Price, but known from historic records in adjacent habitats. Some of these species are extremely rare or, in some cases have been locally extirpated. However, most of the plants that were predicted but not found during our surveys are expected to be located with additional searching, or may potentially recolonize the area following the elimination of ungulates and initiation of other restoration efforts. Forty-four introduced plant species were found within the survey area, seven of which are considered to be highly invasive. These include the grasses Pennisetum clandestinum and Pennisetum setaceum , vines Delairea odorata and Passiflora tarminiana , herbs Senecio madagascariensis and Verbascum thapsus , and the shrub Rubus niveus . Non-zero baseline values are proposed for the one listed plant species found within the Lupea Project area, one species that is a candidate for listing, and the four other rare species we found that may be considered for listing in the future. Additionally, a zero baseline is proposed for 23 other species that were predicted, but not found within the project area. These include 14 Endangered species, one Threatened species, two candidates for listing, and six species of concern. Subsequent monitoring of the site will be necessary to determine if the populations of these species have increased or decreased relative to their baseline values. It is presumed that the management activities Kamehameha Schools has proposed for this area, particularly removal of the ungulates and weed control, will provide a benefit to the habitat as a whole and allow for natural regeneration and maintenance of the all elements of the plant communities found there.

Hawaii↗
USGS2009

Effects of geolocation archival tags on reproduction and adult body mass of sooty shearwaters (Puffinus griseus)

We attached 11 g (1.4% body-mass equivalent) global location sensing (GLS) archival tag packages to tarsi of 25 breeding sooty shearwaters (Puffinus griseus, titi) on Whenua Hou (Codfish Island), New Zealand during the chick-rearing period in 2005. Compared with chicks reared by non-handled adults that did not carry tags, deployment of tags on one or both adult parents ultimately resulted in 35% reduction in chick body mass and significantly reduced chick skeletal size preceding fledging (19 April). However, body mass between chick groups was not significantly different after controlling for skeletal size. Effects on chicks were more pronounced in six pairs where both parents carried tags. Chick mass was negatively related to the duration that adults carried tags. In this study, none of the chicks reared by pairs where both parents were tagged, 54% of chicks reared by pairs where one parent was tagged, and 83% of chicks reared by non-handled and non-tagged parents achieved a previously determined pre-fledging mass threshold (564 g; Sagar & Horning 1998). Body mass of adults carrying tags and returning from transequatorial migration the following year were 4% lighter on average than non-tagged birds, but this difference was not statistically significant. Reduced mass among chicks reared by adults carrying tags during the chick-provisioning period indicated that adults altered "normal" provisioning behaviours to maintain their own body condition at the expense of their chicks. Population-level information derived from telemetry studies can reveal important habitat-linked behaviours, unique aspects of seabird foraging behaviours, and migration ecology. Information for some species (e.g., overlap with fisheries) can aid conservation and marine ecosystem management. We advise caution, however, when interpreting certain data related to adult provisioning behaviours (e.g., time spent foraging, provisioning rates, etc.). If effects on individuals are of concern, we suggest shorter-term deployments, smaller and lighter tags, and alternative attachment techniques, especially when investigating threatened or endangered species. ?? The Royal Society of New Zealand 2009.

New Zealand Journal of Ecology↗
USGS2017

Small-scale genetic structure in an endangered wetland specialist: possible effects of landscape change and population recovery

The effects of anthropogenic landscape change on genetic population structure are well studied, but the temporal and spatial scales at which genetic structure can develop, especially in taxa with high dispersal capabilities like birds, are less well understood. We investigated population structure in the Hawaiian gallinule ( Gallinula galeata sandvicensis ), an endangered wetland specialist bird on the island of O`ahu (Hawai`i, USA). Hawaiian gallinules have experienced a gradual population recovery from near extinction in the 1950s, and have recolonized wetlands on O`ahu in the context of a rapidly urbanizing landscape. We genotyped 152 Hawaiian gallinules at 12 microsatellite loci and sequenced a 520 base-pair fragment of the ND2 region of mitochondrial DNA (mtDNA) from individuals captured at 13 wetland locations on O`ahu in 2014–2016. We observed moderate to high genetic structuring (overall microsatellite F ST = 0.098, mtDNA F ST = 0.248) among populations of Hawaiian gallinules occupying wetlands at very close geographic proximity (e.g., 1.5–55 km). Asymmetry in gene flow estimates suggests that Hawaiian gallinules may have persisted in 2–3 strongholds which served as source populations that recolonized more recently restored habitats currently supporting large numbers of birds. Our results highlight that genetic structure can develop in taxa that are expanding their range after severe population decline, and that biologically significant structuring can occur over small geographic distances, even in avian taxa.

Hawai'i↗
USGS2021

Morphometric sex identification of nestling and free-flying Tasmanian Wedge-tailed Eagles (Aquila audax fleayi)

The endangered Tasmanian Wedge-tailed Eagle ( Aquila audax fleayi ) is the focus of continued research and conservation efforts. A tool for accurate and efficient identification of the sex of individuals would be a valuable aid to research and management. However, plumages are monomorphic between the sexes, making sex identification difficult without molecular analyses. Our aim was to assess whether Tasmanian Wedge-tailed Eagles of different age classes could be sexed accurately using morphological measurements. We took measurements of 25 live late-stage eagle nestlings and 108 carcasses of free-flying birds found opportunistically throughout Tasmania. Sex of all individuals was confirmed via genetic analyses. Free-flying birds were larger than nestlings; thus, we used age-specific statistical tools to distinguish the sexes. For both nestlings and free-flying birds, females were significantly larger than males, but overlap between the sexes prevented accurate sex identification using any single measurement. We used stepwise linear discriminant function analyses to select morphometric measurements necessary for accurate sex identification. Free-flying birds could be sexed with 97.6% accuracy using a combination of measurements of the forearm length, tarsus width (i.e., lateromedial width), and hallux length. Late-stage nestlings (9–10 wk old) could be sexed with 95.4% accuracy using measurements of the hallux width (i.e., lateromedial width), hallux breadth (i.e., anteroposterior width of hallux), and tarsus breadth (i.e., anteroposterior width of the tarsometatarsus at the narrowest point). The discriminate functions we present also allow the identification of sex in cases where morphological sex identification may be in doubt and molecular analyses should be prioritized. These equations provide a valuable research tool for studies of sexual differences in behavior and causes of mortality of this endangered subspecies.

Tasmania↗
USGS2020

High-throughput sequencing reveals distinct regional genetic structure among remaining populations of an endangered salt marsh plant in California

Conservation of rare species requires careful consideration to both preserve locally adapted traits and maintain genetic diversity, as species’ ranges fluctuate in response to a changing climate and habitat loss. Salt marsh systems in California have been highly modified and many salt marsh obligate species have undergone range reductions and habitat loss with concomitant losses of genetic diversity and connectivity. Remaining salt marshes are threatened by rising sea levels, and so these habitats will likely require active restoration and re-establishment efforts. This study aims to provide a reference point for the current status of genetic diversity and range-wide population structure of a federally and state listed endangered plant, Salt Marsh Bird’s Beak (Chloropyron maritimum subsp. maritimum) that can inform future preservation and restoration efforts. We used historical data and current monitoring information to locate and sample all known occurrences throughout the species range in Southern California, and three additional occurrences from Baja California, Mexico. We used flow cytometry and single nucleotide polymorphic markers (SNPs), generated by double-digest restriction-site associated DNA sequencing (ddRAD), to assess relative ploidy, and estimate genetic diversity and population structure across the region. Overall, we found four to five distinct genetic clusters that coincide with geographic regions. Genetic diversity was greatest in the southern part of the range including Baja California and San Diego. These findings can bolster management and restoration efforts by identifying potentially isolated occurrences and areas that are rich sources of allelic diversity, and by providing insight into the amount of genetic differentiation across the species range.

California↗
USGS2024

Rangewide occupancy of a flagship species, the Coastal California Gnatcatcher (Polioptila californica californica) in southern California: Habitat associations and recovery from wildfire

The Coastal California Gnatcatcher ( Polioptila californica californica ), a federally threatened species, is a flagship species for regional conservation planning in southern California (USA). An inhabitant of coastal sage scrub vegetation, the gnatcatcher has declined in response to habitat loss and fragmentation, exacerbated by catastrophic wildfires. We documented the status of gnatcatchers throughout their California range and examined post-fire recovery of gnatcatchers and their habitat. We used GIS to develop a habitat suitability model for Coastal California Gnatcatchers using climate and topography covariates and selected over 700 sampling points in a spatially balanced manner. Bird and vegetation data were collected at each point between March and May in 2015 and 2016. Presence/absence of gnatcatchers was determined during three visits to points, using area searches within 150 x 150 m plots. We used an occupancy framework to generate Percent Area Occupied (PAO) by gnatcatchers, and analyzed PAO as a function of time since fire. At the regional scale in 2016, 23% of the points surveyed were occupied by gnatcatchers, reflecting the effect of massive wildfires in the last 15 years. Similarly, PAO in the post-fire subset of points was 24%, with the highest occupancy in unburned (last fire <2002) habitat. Positive predictors of occupancy included percent cover of California sagebrush ( Artemisia californica ), California buckwheat ( Eriogonom fasciculatum ), and sunflowers ( Encelia spp., Bahiopsis laciniata ), while negative predictors included laurel sumac ( Malosma laurina ) and total herbaceous cover; in particular, non-native grasses. Our findings indicate that recovery from wildfire may take decades, and provide information to speed up recovery through habitat restoration.

California↗