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USGS2018

Respiratory disease, behavior, and survival of mountain goat kids

Bacterial pneumonia is a threat to bighorn sheep ( Ovis canadensis ) populations. Bighorn sheep in the East Humboldt Mountain Range (EHR), Nevada, USA, experienced a pneumonia epizootic in 2009–2010. Testing of mountain goats ( Oreamnos americanus ) that were captured or found dead on this range during and after the epizootic detected bacteria commonly associated with bighorn sheep pneumonia die‐offs. Additionally, in years subsequent to the bighorn sheep epizootic, the mountain goat population had low kid:adult ratios, a common outcome for bighorn sheep populations that have experienced a pneumonia epizootic. We hypothesized that pneumonia was present and negatively affecting mountain goat kids in the EHR. From June–August 2013–2015, we attempted to observe mountain goat kids with marked adult females in the EHR at least once per week to document signs of respiratory disease; identify associations between respiratory disease, activity levels, and subsequent disappearance (i.e., death); and estimate weekly survival. Each time we observed a kid with a marked adult female, we recorded any signs of respiratory disease and collected behavior data that we fit to a 3‐state discrete hidden Markov model (HMM) to predict a kid's state (active vs. sedentary) and its probability of disappearing. We first observed clinical signs of respiratory disease in kids in late July–early August each summer. We observed 8 of 31 kids with marked adult females with signs of respiratory disease on 13 occasions. On 11 of these occasions, the HMM predicted that kids were in the sedentary state, which was associated with increased probability of subsequent death. We estimated overall probability of kid survival from June–August to be 0.19 (95% CI = 0.08–0.38), which was lower than has been reported in other mountain goat populations. We concluded that respiratory disease was present in the mountain goat kids in the EHR and negatively affected their activity levels and survival. Our results raise concerns about potential effects of pneumonia to mountain goat populations and the potential for disease transmission between mountain goats and bighorn sheep where the species are sympatric.

Journal of Wildlife Management↗

USGS2014

Nesting ecology and nest survival of lesser prairie-chickens on the Southern High Plains of Texas

The decline in population and range of lesser prairie-chickens ( Tympanuchus pallidicinctus ) throughout the central and southern Great Plains has raised concerns considering their candidate status under the United States Endangered Species Act. Baseline ecological data for lesser prairie-chickens are limited, especially for the shinnery oak-grassland communities of Texas. This information is imperative because lesser prairie-chickens in shinnery oak grasslands occur at the extreme southwestern edge of their distribution. This geographic region is characterized by hot, arid climates, less fragmentation, and less anthropogenic development than within the remaining core distribution of the species. Thus, large expanses of open rangeland with less anthropogenic development and a climate that is classified as extreme for ground nesting birds may subsequently influence nest ecology, nest survival, and nest site selection differently compared to the rest of the distribution of the species. We investigated the nesting ecology of 50 radio-tagged lesser prairie-chicken hens from 2008 to 2011 in the shinnery oak-grassland communities in west Texas and found a substantial amount of inter-annual variation in incubation start date and percent of females incubating nests. Prairie-chickens were less likely to nest near unimproved roads and utility poles and in areas with more bare ground and litter. In contrast, hens selected areas dominated by grasses and shrubs and close to stock tanks to nest. Candidate models including visual obstruction best explained daily nest survival; a 5% increase in visual obstruction improved nest survival probability by 10%. The model-averaged probability of a nest surviving the incubation period was 0.43 (SE = 0.006; 95% CI: 0.23, 0.56). Our findings indicate that lesser prairie-chicken reproduction during our study period was dynamic and was correlated with seasonal weather patterns that ultimately promoted greater grass growth earlier in the nesting season that provided visual obstruction from predators.

Texas↗

USGS2020

Distribution and abundance of Westslope Cutthroat Trout in relation to habitat characteristics at multiple spatial scales

The distribution and relative abundance of Westslope Cutthroat Trout (WCT) Oncorhynchus clarkii lewisi in relation to habitat characteristics remain unknown across large portions of the species’ range. The goals of this research were to provide a foundational understanding of WCT distribution and relative abundance related to habitat characteristics in tributaries of the St. Maries River, Idaho—a highly altered watershed. The basin drains an area of approximately 1,863 km 2 and has a longitudinal elevation difference of about 207 m. Backpack electrofishing and habitat assessments were conducted at 68 reaches in 35 different tributaries of the St. Maries River in 2017 and 2018. Habitat was measured at small (reach-level) and large (watershed-level) scales. A total of 652 WCT was sampled from 52 of 68 total reaches. Habitat characteristics varied by age-class, but most WCT were estimated to be age 0 and age 1. Logistic regression models indicated that the presence of age-0 WCT was positively related to stream gradient and elevation, but negatively related to water temperature, road density, fine substrate, stream depth, and the presence of Brook Trout (BKT) Salvelinus fontinalis . The relative abundance of age-0 WCT was positively associated with road density and inversely related to wetted width, canopy cover, and elevation. The presence of age-1 and older (age-1+) WCT was positively related to gradient, canopy cover, and elevation, but negatively associated with road density, temperature, stream depth, and the presence of BKT. Relative abundance of age-1+WCT was positively associated with gradient, large substrate, canopy cover, and road density. Conversely, the relative abundance of age-1+WCT was inversely related to wetted width and elevation. This research indicates that WCT populations can persist in response to altered landscapes when suitable habitat exists. However, unmitigated threats, such as nonnative species competition (e.g., BKT), hybridization with Rainbow Trout O. mykiss , habitat loss, and habitat fragmentation, pose persistent complications to WCT abundance in locations where populations appear robust but their actual abundance is unknown.

Idaho↗

USGS2025

Evaluating detection of temporal trends in long-term freshwater fisheries data to inform future monitoring efforts

Objective Florida’s Freshwater Fisheries Long-Term Monitoring Program was implemented in 2006 to track changes in freshwater fish populations and communities. As part of an evaluation of the program, this study used a simulation framework to assess trend detection for fish abundance and biomass indices and how sampling intensity (number of samples per year) and frequency (number of years) can influence detection of these trends. Methods Using count and weight data from fall electrofishing samples collected between 2006 and 2021 from 21 lakes, trends were simulated for annual mean count and weight over a 10-year period that ranged from −70% to +200%. In all, simulations were performed for seven game fish species and three management-relevant groups (large nongame, nonnative, and prey species). For sampling intensity, data were simulated with a range of sample sizes, from 10 to 40 electrofishing transects or the maximum number available for a given lake. For sampling frequency, data were simulated for different sampling schedules that included sampling 1 year followed by 1- or 2-year breaks (4–5 years of sampling in a 10-year period), sampling two consecutive years followed by 1- or 2-year breaks (6–7 years of sampling in a 10-year period), and sampling the first 5 years only. Results Simulations based on weight and count data yielded similar results, but the effect of sampling frequency and sampling schedule varied by species, management group, and lake. Trend detection was lower and more variable when mean counts and weights of fish in electrofishing samples were low. Overall, at least a 60% increase or 40% decrease over a 10-year period was typically needed for trends in mean weight and count to be detected at least 80% of the time in at least half of the lakes. Increasing sampling intensity did not substantially improve trend detection for lower-magnitude changes, but reducing sample intensity to a minimum of 10 electrofishing transects per year would have a large negative effect on trend detection in almost all lakes. Detection of trends improved as the number of years sampled increased, but ideally, sampling should be spaced throughout the entire 10-year period to capture the full magnitude of change. Sampling every year generally resulted in better trend detection and for many species and groups was the only sampling schedule that resulted in all study lakes achieving the 80% target detection level. Of the alternative schedules considered, those involving 2 years of consecutive sampling outperformed those with only 1 year of sampling followed by a 1- or 2-year break. Conclusions Relatively large changes in mean count and weight were required to detect trends over a 10-year period, but there was no clear advantage of using count or weight data for monitoring purposes. Further, study results support the current sampling intensity, but trend detection is optimized at higher mean catch and weight values. Although sampling every year is ideal, an alternative schedule involving sampling two consecutive years with 1- or 2-year breaks could be considered in certain situations. These results will be important for informing future decisions regarding Florida’s Freshwater Fisheries Long-Term Monitoring Program and other monitoring initiatives.

North American Journal of Fisheries Management.↗

USGS2018

Metamodeling and mapping of nitrate flux in the unsaturated zone and groundwater, Wisconsin, USA

Nitrate contamination of groundwater in agricultural areas poses a major challenge to the sustainability of water resources. Aquifer vulnerability models are useful tools that can help resource managers identify areas of concern, but quantifying nitrogen (N) inputs in such models is challenging, especially at large spatial scales. We sought to improve regional nitrate (NO 3 − ) input functions by characterizing unsaturated zone NO 3 − transport to groundwater through use of surrogate, machine-learning metamodels of a process-based N flux model. The metamodels used boosted regression trees (BRTs) to relate mappable landscape variables to parameters and outputs of a previous “vertical flux method” (VFM) applied at sampled wells in the Fox, Wolf, and Peshtigo (FWP) river basins in northeastern Wisconsin. In this context, the metamodels upscaled the VFM results throughout the region, and the VFM parameters and outputs are the metamodel response variables. The study area encompassed the domain of a detailed numerical model that provided additional predictor variables, including groundwater recharge, to the metamodels. We used a statistical learning framework to test a range of model complexities to identify suitable hyperparameters of the six BRT metamodels corresponding to each response variable of interest: NO 3 − source concentration factor (which determines the local NO 3 − input concentration); unsaturated zone travel time; NO 3 − concentration at the water table in 1980, 2000, and 2020 (three separate metamodels); and NO 3 − “extinction depth”, the eventual steady state depth of the NO 3 − front. The final metamodels were trained to 129 wells within the active numerical flow model area, and considered 58 mappable predictor variables compiled in a geographic information system (GIS). These metamodels had training and cross-validation testing R 2 values of 0.52 – 0.86 and 0.22 – 0.38, respectively, and predictions were compiled as maps of the above response variables. Testing performance was reasonable, considering that we limited the metamodel predictor variables to mappable factors as opposed to using all available VFM input variables. Relationships between metamodel predictor variables and mapped outputs were generally consistent with expectations, e.g. with greater source concentrations and NO 3 − at the groundwater table in areas of intensive crop use and well drained soils. Shorter unsaturated zone travel times in poorly drained areas likely indicated preferential flow through clay soils, and a tendency for fine grained deposits to collocate with areas of shallower water table. Numerical estimates of groundwater recharge were important in the metamodels and may have been a proxy for N input and redox conditions in the northern FWP, which had shallow predicted NO 3 − extinction depth. The metamodel results provide proof-of-concept for regional characterization of unsaturated zone NO 3 − transport processes in a statistical framework based on readily mappable GIS input variables.

Wisconsin↗

USGS2020

Simulating strategic implementation of the CRP to increase Greater prairie-chicken abundance

The Conservation Reserve Program (CRP) has the potential to influence the distribution and abundance of grasslands in many agricultural landscapes, and thereby provide habitat for grassland-dependent wildlife. Greater prairie-chickens ( Tympanuchus cupido pinnatus ) are a grassland-dependent species with large area requirements and have been used as an indicator of grassland ecosystem function; they are also a species of conservation concern across much of their range. Greater prairie-chicken populations respond to the amount and configuration of grasslands and wetlands in agriculturally dominated landscapes, which in turn can be influenced by the CRP; however, CRP enrollments and enrollment caps have declined from previous highs. Therefore, prioritizing CRP reenrollments and new enrollments to achieve the greatest benefit for grassland-dependent wildlife seems prudent. We used models relating either lek density or the number of males at leks to CRP enrollments and the resulting landscape structure to predict changes in greater prairie-chicken abundance related to changes in CRP enrollments. We simulated 3 land-cover scenarios: expiration of existing CRP enrollments, random, small-parcel (4,040 m 2 ) addition of CRP grasslands, and strategic, large-parcel (80,000 m 2 ) addition of CRP grasslands. Large-parcel additions were the average enrollment size in northwestern Minnesota, USA, within the context of a regional prairie restoration plan. In our simulations of CRP enrollment expirations, the abundance of greater prairie-chickens declined when grassland landscape contiguity declined with loss of CRP enrollments. Simulations of strategic CRP enrollment with large parcels to increase grassland contiguity more often increased greater prairie-chicken abundance than random additions of the same area in small parcels that did not increase grassland contiguity. In some cases, CRP enrollments had no or a negative predicted change in greater prairie-chicken abundance because they provided insufficient grassland contiguity on the landscape, or increased cover-type fragmentation. Predicted greater prairie-chicken abundance increased under large-parcel and small-parcel scenarios of addition of CRP grassland; the greatest increases were associated with large-parcel additions. We suggest that strategic application of the CRP to improve grassland contiguity can benefit greater prairie-chicken populations more than an opportunistic approach lacking consideration of the larger landscape context. Strategic implementation of the CRP can benefit greater prairie-chicken populations in northwestern Minnesota, and likely elsewhere in landscapes where grassland continuity may be a limiting factor.

Minnesota↗

USGS2015

Connectivity among subpopulations of Louisiana black bears as estimated by a step selection function

Habitat fragmentation is a fundamental cause of population decline and increased risk of extinction for many wildlife species; animals with large home ranges and small population sizes are particularly sensitive. The Louisiana black bear ( Ursus americanus luteolus ) exists only in small, isolated subpopulations as a result of land clearing for agriculture, but the relative potential for inter-subpopulation movement by Louisiana black bears has not been quantified, nor have characteristics of effective travel routes between habitat fragments been identified. We placed and monitored global positioning system (GPS) radio collars on 8 female and 23 male bears located in 4 subpopulations in Louisiana, which included a reintroduced subpopulation located between 2 of the remnant subpopulations. We compared characteristics of sequential radiolocations of bears (i.e., steps) with steps that were possible but not chosen by the bears to develop step selection function models based on conditional logistic regression. The probability of a step being selected by a bear increased as the distance to natural land cover and agriculture at the end of the step decreased and as distance from roads at the end of a step increased. To characterize connectivity among subpopulations, we used the step selection models to create 4,000 hypothetical correlated random walks for each subpopulation representing potential dispersal events to estimate the proportion that intersected adjacent subpopulations (hereafter referred to as successful dispersals). Based on the models, movement paths for males intersected all adjacent subpopulations but paths for females intersected only the most proximate subpopulations. Cross-validation and genetic and independent observation data supported our findings. Our models also revealed that successful dispersals were facilitated by a reintroduced population located between 2 distant subpopulations. Successful dispersals for males were dependent on natural land cover in private ownership. The addition of hypothetical 1,000-m- or 3,000-m-wide corridors between the 4 study areas had minimal effects on connectivity among subpopulations. For females, our model suggested that habitat between subpopulations would probably have to be permanently occupied for demographic rescue to occur. Thus, the establishment of stepping-stone populations, such as the reintroduced population that we studied, may be a more effective conservation measure than long corridors without a population presence in between.

Louisiana↗

USGS2023

Adult Sea Lamprey approach and passage at the Milford Dam fishway, Penobscot River, Maine, United States

Objective Sea Lamprey Petromyzon marinus provide important ecological services within their native range, such as nutrient cycling, and can also act as a prey source for other species. Adult Sea Lamprey must access freshwater rivers to spawn, and because of this they are susceptible to changes in river connectivity. Human-made structures, such as dams, can exclude them from usable habitat. Sea Lamprey dam passage has not been extensively studied in Maine, despite Maine being within the native range of this species. The goals of this study were to evaluate upstream passage efficiency at the Milford Dam on the Penobscot River, Maine, and to provide comprehensive information about adult Sea Lamprey passage at five other dams throughout the Penobscot River watershed. Methods In 2020–2021 we captured and tagged 150 Sea Lamprey at the Milford Dam, the lowest dam in the Penobscot River, Maine, and displaced them downstream to assess passage efficiency at this dam and five upstream dams. In 2020, 50 Sea Lamprey were released on the east shore of the river downstream of Milford Dam; in 2021, the east shore release was repeated with an additional 50 fish and another 50 fish were released on the west shore. Result Between 70–82% of Sea Lamprey were observed passing Milford Dam again after mean delay times of 9–11 days. The release location did not affect dam passage success or the amount of time that was required to locate and use the passage structures. Sea Lampreys from both release groups were equally likely to approach the entrance to the fishway upon returning to Milford Dam, despite the fishway being located against the eastern shore of the river. However, high flows shortly after release may have resulted in higher attraction to the fishway in 2020. Passage success at dams upstream of Milford was highly variable. All Sea Lamprey were able to successfully navigate past West Enfield Dam (100% passage, n = 63), whereas Brownsmill Dam apparently acted as a complete barrier to further migration (0% passage, n = 7). Fish from all years and release groups together had a median upstream migration distance of 38.8 km after fish had passed Milford Dam, and a maximum observed upstream travel distance of approximately 100 km, indicating that most tagged Sea Lamprey ended their migration in the vicinity of a dam. Conclusion The results of this study indicate that Sea Lamprey have high passage efficiency at the Milford Dam and highlight areas within the Penobscot River basin—such as the Brownsmill Dam—where passage facilities are currently inadequate for Sea Lamprey.

Maine↗

USGS2025

Spatially explicit capture-recapture using fecal DNA to estimate elk population abundance and growth in western North Carolina, USA

In an effort to restore extirpated elk to their historical range, 52 elk were reintroduced to Great Smoky Mountains National Park (GRSM) in North Carolina, USA, during 2001 and 2002. Since their reintroduction, elk numbers have increased, and elk have extended their range beyond GRSM boundaries. We used spatially explicit capture-recapture (SCR) methods based on fecal DNA to identify individual elk and estimate population abundance ( N ), apparent survival ( φ ), per capita recruitment ( f ), and population growth rate ( λ ) in western North Carolina. We walked a series of transects during 3 winter field seasons (2020–2022) and collected elk pellets encountered along those transects. We created spatially explicit capture histories and incorporated those data into both closed and open population SCR models. The top performing closed SCR models for males and females estimated density by year and as a function of the scaled distance to the nearest field, with densities decreasing as the distance increased. Combined male and female N were 179 elk (95% CI = 149–215) in 2020, 220 elk (95% CI = 188–256) in 2021, and 240 elk (95% CI = 207–279) in 2022. The top open population model estimated both φ and λ as functions of sex and year. The estimate of φ for males was 0.682 (95% CI = 0.317–0.908) during 2020–2021 and 0.339 (95% CI = 0.152–0.596) during 2021–2022 and for females was 0.953 (95% CI = 0.830–1.000) during 2020–2021 and 0.829 (95% CI = 0.601–1.000) during 2021–2022. The annual population growth rate ( λ ) for males was 1.127 (95% CI = 0.806–1.575) during 2020–2021 and 0.811 (95% CI = 0.566–1.163) during 2021–2022 and for females was 1.559 (95% CI = 1.162–2.091) during 2020–2021 and 1.122 (95% CI = 0.876–1.437) during 2021–2022. Our elk abundance estimates in areas >300 m from fields were negligible, and we suggest that sampling only the areas in and adjacent to fields in the future will result in reliable but more cost-efficient population estimates. Confidence intervals for vital rate parameters were wide for our 3-year dataset, but continued annual pellet sampling will increase sample sizes for vital rate estimation and thus improve precision. If elk herd expansion on public lands is desired, we suggest habitat modification to establish open grasslands adjacent to forests.

North Carolina↗

USGS2026

VegET evapotranspiration for Africa: Continental-scale simulation, multi-product evaluation, and drought assessment

Study region Continental Africa, encompassing diverse climatic zones—tropical, arid, and temperate—and spanning major transboundary river basins such as the Nile, Niger, Congo, Volta, and Zambezi River Basins. The region exhibits pronounced hydroclimatic gradients and heterogeneous land use systems ranging from rainfed croplands and rangelands to dense tropical forests and irrigated schemes. Study focus Actual evapotranspiration (ETa) is a central component of the terrestrial water balance, governing the redistribution of water and energy between the land surface and the atmosphere. Accurate estimation of ETa at continental scale is critical for hydrological monitoring, water resource management, and climate adaptation, as well as for quantifying water, energy, and carbon fluxes that underpin sustainable development. In this study, we applied the agro-hydrologic VegET v2 model to simulate a new, high-resolution, continental-scale ETa dataset for Africa (2000–2021). The model results were benchmarked against four widely used remote sensing-based products—MODIS16 v6.1, SSEBop v6.1, WaPOR v3, and GLEAM v4.1a—across major climate zones, land use types, and River Basins, providing a comprehensive multi-product evaluation of evapotranspiration dynamics across the continent. New hydrological insights for the region Validation against eddy covariance flux tower observations at eight representative sites confirmed that VegET v2 accurately reproduces the seasonal dynamics of observed ETa, achieving a correlation (r) of 0.8 and an RMSE of 25 mm month⁻¹ —accuracy that is comparable to or higher than accuracies of satellite-based products MODIS16, SSEBop, and GLEAM. This study represents one of the first Africa-wide hydrological simulations of ETa, extending the VegET model beyond basin-scale applications. Intercomparisons reveal that VegET aligns closely with MODIS16, SSEBop, and GLEAM in humid and tropical regions (r = 0.80–0.90; RMSE < 20 mm month⁻¹), while greater discrepancies appear in arid and semi-arid zones, where WaPOR tends to overestimate ETa (RMSE ≥ 28 mm month⁻¹). Despite these differences, VegET effectively captures spatial and temporal ETa variability across rainfed croplands, forests, and savannas, supporting its utility in regional water balance assessments, water accounting, and drought monitoring. A key application of VegET v2 is the Evapotranspiration Deficit Index (ETDI), derived by integrating VegET-based ETa with potential evapotranspiration (PET) to quantify water stress. ETDI successfully captured major drought episodes across Africa, including persistent Sahelian and southern African dry spells, the 2020–2021 winter drought in the Maghreb, and the 2018–2019 austral summer drought in southern Africa, while identifying positive anomalies over central Africa indicative of recurrent wetness. These results underscore VegET’s capability as a hydrologically consistent, operational tool for continental ETa monitoring and drought assessment, offering support for basin-scale water balance studies, food security planning, and climate resilience across Africa’s diverse hydrological environments.

Journal of Hydrology: Regional Studies↗

USGS2017

Expanding the North American Breeding Bird Survey analysis to include additional species and regions

The North American Breeding Bird Survey (BBS) contains data for >700 bird species, but analyses often focus on a core group of ∼420 species. We analyzed data for 122 species of North American birds for which data exist in the North American Breeding Bird Survey (BBS) database but are not routinely analyzed on the BBS Summary and Analysis Website. Many of these species occur in the northern part of the continent, on routes that fall outside the core survey area presently analyzed in the United States and southern Canada. Other species not historically analyzed occur in the core survey area with very limited data but have large portions of their ranges in Mexico and south. A third group of species not historically analyzed included species thought to be poorly surveyed by the BBS, such as rare, coastal, or nocturnal species. For 56 species found primarily in regions north of the core survey area, we expanded the scope of the analysis, using data from 1993 to 2014 during which ≥3 survey routes had been sampled in 6 northern strata (Bird Conservation regions in Alaska, Yukon, and Newfoundland and Labrador) and fitting log-linear hierarchical models for an augmented BBS survey area that included both the new northern strata and the core survey area. We also applied this model to 168 species historically analyzed in the BBS that had data from these additional northern strata. For both groups of species we calculated survey-wide trends for the both core and augmented survey areas from 1993 to 2014; for species that did not occur in the newly defined strata, we computed trends from 1966 to 2014. We evaluated trend estimates in terms of established credibility criteria for BBS results, screening for imprecise trends, small samples, and low relative abundance. Inclusion of data from the northern strata permitted estimation of trend for 56 species not historically analyzed, but only 4 of these were reasonably monitored and an additional 13 were questionably monitored; 39 of these species were likely poorly monitored because of small numbers of samples or very imprecisely estimated trends. Only 4 of 66 “new” species found in the core survey area were reasonably monitored by the BBS; 20 were questionably monitored; and 42 were likely poorly monitored by the BBS because of inefficiency in precision, abundance, or sample size. The hierarchical analyses we present provide a means for reasonable inclusion of the additional species and strata in a common analysis with data from the core area, a critical step in the evolution of the BBS as a continent-scale survey. We recommend that results be presented both 1) from 1993 to the present using the expanded survey area, and 2) from 1966 to the present for the core survey area. Although most of the “new” species we analyzed were poorly monitored by the BBS during 1993–2014, continued expansion of the BBS will improve the quality of information in future analyses for these species and for the many other species presently monitored by the BBS.

Journal of Fish and Wildlife Management↗

USGS2016

Demographic response of northern spotted owls to barred owl removal

Federally listed as threatened in 1990 primarily because of habitat loss, the northern spotted owl ( Strix occidentalis caurina ) has continued to decline despite conservation efforts resulting in forested habitat being reserved throughout its range. Recently, there is growing evidence the congeneric invasive barred owl ( Strix varia ) may be responsible for the continued decline primarily by excluding spotted owls from their preferred habitat. We used a long-term demographic study for spotted owls in coastal northern California as the basis for a pilot barred owl removal experiment. Our demography study used capture–recapture, reproductive output, and territory occupancy data collected from 1990 to 2013 to evaluate trends in vital rates and populations. We used a classic before-after-control-impact (BACI) experimental design to investigate the demographic response of northern spotted owls to the lethal removal of barred owls. According to the best 2-species dynamic occupancy model, there was no evidence of differences in barred or northern spotted owl occupancy prior to the initiation of the treatment (barred owl removal). After treatment, barred owl occupancy was lower in the treated relative to the untreated areas and spotted owl occupancy was higher relative to the untreated areas. Barred owl removal decreased spotted owl territory extinction rates but did not affect territory colonization rates. As a result, spotted owl occupancy increased in the treated area and continued to decline in the untreated areas. Prior to and after barred owl removal, there was no evidence that average fecundity differed on the 2 study areas. However, the greater number of occupied spotted owl sites on the treated areas resulted in greater productivity in the treated areas based on empirical counts of fledged young. Prior to removal, survival was declining at a rate of approximately 0.2% per year for treated and untreated areas. Following treatment, estimated survival was 0.859 for the treated areas and 0.822 for the untreated areas. Derived estimates of population change on both study areas showed the same general decline before removal with an estimated slope of –0.0036 per year. Following removal, the rate of population change on the treated areas increased to an average of 1.029 but decreased to an average of 0.870 on the untreated areas. The results from this first experiment demonstrated that lethal removal of barred owls allowed the recovery of northern spotted owl populations in the treated portions of our study area. If additional federally funded barred owl removal experiments provide similar results, this could be the foundation for development of a long-term conservation strategy for northern spotted owls.

California↗

USGS2013

Legal, ethical, and procedural bases for the use of aseptic techniques to implant electronic devices

The popularity of implanting electronic devices such as transmitters and data loggers into captive and free-ranging animals has increased greatly in the past two decades. The devices have become smaller, more reliable, and more capable (Printz 2004; Wilson and Gifford 2005; Metcalfe et al. 2012). Compared with externally mounted devices, implanted devices are largely invisible to external viewers such as tourists and predators; exist in a physically protected, thermally stable environment in mammals and birds; and greatly reduce drag and risk of entanglement. An implanted animal does not outgrow its device or attachment method as can happen with collars and harnesses, which allows young animals to be more safely equipped. However, compared with mounting external devices, implantation requires greater technical ability to perform the necessary anesthesia, analgesia, and surgery. More than 83% of publications in the 1990s that used radiotelemetry on animals assumed that there were no adverse effects on the animal (Godfrey and Bryant 2003). It is likely that some studies using implanted electronic devices have not been published due to a high level of unexpected mortality or to aberrant behavior or disappearance of the implanted animals, a phenomenon known as the “file drawer” problem (Rosenthal 1979; Scargle 2000). The near absence of such studies from the published record may be providing a false sense of security that procedures being used are more innocuous than they actually are. Similarly, authors sometimes state that it was unlikely that device implantation was problematic because study animals appeared to behave normally, or authors state that previous investigators used the same technique and saw no problems. Such statements are suppositions if no supporting data are provided or if the animals were equipped because there was no other way to follow their activity. Moreover, such suppositions ignore other adverse effects that affect behavior indirectly, and animals often mask the signs of infection to avoid attracting predators (Wobeser 2006). Guidance specific to sterilization of electronic devices for implantation is limited in the wildlife record (Burger et al. 1994; Mulcahy 2003). Few biologists have been formally trained in aseptic technique, but most biologists know that electronic devices should be treated in some way to reduce the chance for infection of the host animal by bacteria, viruses, parasites, and fungi. Most biologists (73%) who implant devices into fishes believe aseptic techniques are important (Wagner and Cooke 2005). However, I maintain that many biologists find it difficult to place the concept of asepsis into practice in their work because of confusion about what constitutes aseptic technique, a lack of surgical knowledge and training, the perception of increased costs, or the belief that aseptic surgeries are impractical or unnecessary for their application. Some have even argued that, while compromising surgical techniques in the field might result in complications or mortalities, the money saved would allow for a compensatory increase in sample size (Anderson and Talcott 2006). In this paper I define aseptic surgical techniques, document the legal and professional guidance for performing aseptic surgeries on wild animals, and present options for sterilizing electronic devices and surgical instruments for field use.

Journal of Fish and Wildlife Management↗