USGS Science⌕ Search

SEARCH · USGS Science

Results for “Fisheries”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,009 records · Page 56Linked to original sources
USGS2021

Understanding genetics for successful conservation and restoration of resilient Chesapeake Bay brook trout populations

Traditionally, fisheries management has focused on the abundance, distribution, and size structure of populations. Although these factors remain key aspects of management, a large and growing body of evidence highlights the importance of genetics in conserving wild populations, especially when populations are small and isolated (Frankham et al. 2017). Local adaptations are very common among fishes and help populations cope with specific conditions in their local environment (Fraser et al. 2011). The field of conservation genetics and genomics is highly technical and has advanced rapidly in recent years, offering a wealth of information to support brook trout conservation and restoration. A major impediment to successfully incorporating these advances into conservation outcomes is that most fisheries managers have only a basic understanding of fish genetics and its relevance to their management decisions.

Maryland, Virginia↗
USGS2025

Evaluating how changing climate and water clarity can affect restoration of native coregonine fishes in midwestern lakes

In the upper midwestern United States, coregonine fishes (e.g., ciscoes and whitefishes) have provided a key food source for Indigenous peoples since time immemorial. In the last century, however, several anthropogenic stressors including overfishing, declining quality of key habitat (e.g., dams, algal blooms), and negative interactions with invasive species have led to declines in the fisheries that coregonines support. Hence, fishery managers have undertaken steps to conserve existing diversity or re-introduce species that have been locally extirpated. This study assessed the extent to which changes in water clarity and climate pose challenges for conservation of coregonines and sought to provide information to inform management decisions about which populations would be best for reintroduction. Through experiments, we found that a Cisco ( Coregonus artedi ) population at the southern edge of its range had no marked advantages in respiration or thermal tolerance, relative to a northern Great Lake population. This result indicates that the latter population would be a reasonable candidate for reintroduction in Lake Erie, where warming water could be a potential impediment. Other laboratory experiments revealed that Cisco could be vulnerable to increasing ultraviolet radiation (UV; 280 – 320 nm) penetration in lakes due to reduced ice cover and increased water clarity owing to water quality improvements and/or invasive mussel filtration. Our experiments found that UV exposure causes earlier hatching, more irregular pigmentation near the head and yolk-sac region, and reduced heart rate. Therefore, UV could be a heretofore unrealized threat to Cisco populations. Through the completion of additional final products from this project and additional research connecting laboratory and field data together, the extent to which the eggs and larvae of coregonine species could be vulnerable to increased UV associated with increasing water clarity or reduced ice cover will help inform restoration or conservation planning for these fish.

Cooperator Report↗
USGS2025

Status and trends in the Lake Superior fish community, 2024

The U.S. Geological Survey has conducted annual fishery surveys across Lake Superior since 1978 that describe trends in fish species occurrence and relative abundance to inform fisheries management and ecosystem health. In 2024, the Lake Superior fish community was sampled with daytime bottom and surface trawls at 72 nearshore locations in June and 36 offshore locations in July. Nearshore bottom trawls collected 22,190 fish represented by 27 species or morphotypes. The number of species collected at each location ranged from 1 to 12, with a median of 5.5 species. Estimated fish biomass at individual locations ranged from <0.1 to 62.9 kg per ha with a lakewide mean of 3.7 kg per ha. Offshore bottom trawls collected 33,634 fish represented by 12 species or morphotypes. Estimated fish biomass at individual locations ranged from 0.6 to 25.8 kg per ha with a lakewide mean of 8.3 kg per ha, which was the second highest for the period-of-record. Lakewide average densities (fish per ha) of age-1 fish were 1 per ha for Bloater, 5 per ha for Cisco, 1 per ha for Lake Whitefish, 60 per ha for Rainbow Smelt, and 19 per ha for Kiyi. Surface trawling collected 5,177 larval Coregonus individuals which was the third fewest Coregonus larvae collected in a whole lake survey since the larval fish survey began in 2014. Nearshore mean larval Coregonus densities were 176 fish per ha in June 2024 and offshore densities were 7 fish per ha in July 2024. June and July surface water temperatures were near the warmest for the period-of-record.

Lake Superior↗
USGS1985

Habitat Suitability Index Models: Southern and gulf flounders

Both the southern and gulf flounders (paralichthrS lethostigma, f. albi~utta) are important commercial and recreationa species. Catch statlstics for flounder do not differentiate between species; however, southern flounders are more common than gulf flounders except on the gulf coast of Florida (Topp and Hoff 1972). The commercial fishery consists of incidental catches by shrimp trawlers. A total of 853,162 kg (1,880,900 lb) of unclassified flounder worth $572,142 was caught from the Gulf of Mexico in 1976 (U.S. Dep. Commerce 1980). The sport fishery consists of both hook-and-line fishing and gigging.

FWS/OBS↗
USGS1982

Mitigation and enhancement techniques for the Upper Mississippi River system and other large river systems

Extensive information is provided on techniques that can reduce or eliminate the negative impact of man's activities (particularly those related to navigation) on large river systems, with special reference to the Upper Mississippi River. These techniques should help resource managers who are concerned with such river systems to establish sound environmental programs. Discussion of each technique or group of techniques include (1) situation to be mitigated or enhanced; (2) description of technique; (3) impacts on the environment; (4) costs; and (5) evaluation for use on the Upper Mississippi River Systems. The techniques are divided into four primary categories: Bank Stabilization Techniques, Dredging and Disposal of Dredged Material, Fishery Management Techniques, and Wildlife Management Techniques. Because techniques have been grouped by function, rather than by structure, some structures are discussed in several contexts. For example, gabions are discussed for use in revetments, river training structures, and breakwaters. The measures covered under Bank Stabilization Techniques include the use of riprap revetments, other revetments, bulkheads, river training structures, breakwater structures, chemical soil stabilizers, erosion-control mattings, and filter fabrics; the planting of vegetation; the creation of islands; the creation of berms or enrichment of beaches; and the control of water level and boat traffic. The discussions of Dredging and the Disposal of Dredged Material consider dredges, dredging methods, and disposal of dredged material. The following subjects are considered under Fishery Management Techniques: fish attractors; spawning structures; nursery ponds, coves, and marshes; fish screens and barriers; fish passage; water control structures; management of water levels and flows; wing dam modification; side channel modification; aeration techniques; control of nuisance aquatic plants; and manipulated of fish populations. Wildlife Management Techniques include treatments of artificial nest structures, island creation or development, marsh creation or development, greentree reservoirs and mast management, vegetation control, water level control, and revegetation.

Upper Mississippi River↗
USGS2019

Conservation of black bass diversity: An emerging management paradigm

Black bass (Micropterus spp.) are quintessential North American sportfishes that support economically valuable fisheries and act as keystone predators within aquatic ecosystems. Despite their prominence among North American fish fauna, a number of taxonomic designations are unresolved and novel forms continue to be identified within drainages of the southeastern USA. We review the current understanding of black bass diversity, including distributions, evolutionary histories, and phylogenetic relationships. We also provide a brief overview of the major paradigms that have been applied to black bass management and highlight an emerging focus on the conservation of black bass diversity. Black bass diversity is threatened by anthropogenic land- and water-use, fragmentation of fluvial habitats, historic and contemporary stocking of non-native congeners, and climate change. Successful conservation of black bass diversity requires that management agencies prioritize the protection of native species, forms, and lineages within and across jurisdictional boundaries. Collaboration among scientists and resource is needed to develop practical ways to ameliorate current problems created by past and present anthropogenic alterations, while also preparing for future challenges like global climate change.

Fisheries Magazine↗
USGS2020

Inexpensive, underwater filming of rare fishes in high definition

Generating public interest in fish and their biology is often challenging. Many aquatic species are cryptic and largely invisible to the public. Therefore, increasing public awareness of cryptic fishes and elevating their visibility to broad audiences requires innovation. Inexpensive technological advancements now provide fisheries biologists, managers, and researchers with means never before possible for documenting fish in their natural habitat via underwater videography. We investigated cost efficient and simple methods for capturing and creating high quality, high definition, and informative underwater videos that could be used by people with little or no previous experience in videography. We tested 1) a variety of filming equipment including cameras and camera recording settings, lenses, batteries, and memory cards; 2) active and passive camera deployment techniques; and 3) a variety of free and paid postproduction software and compared them for ease of use, expense, and quality of output. Highest quality footage, i.e., highest resolution, clearest, and most stable, was obtained using a GoPro action camera deployed underwater in a stationary position mounted to a metal base plate using a combination of stock and macro lenses, and filming in 4K resolution at 30 frames per second. Final production videos were created using Adobe Premiere Pro.

Fisheries Magazine↗
USGS2021

Does type, quantity, and location of habitat matter for fish diversity in a Great Plains riverscape?

Fisheries professionals frequently measure habitat type and amount, but less often measure the importance of where those habitats are located and in what combinations. We address this challenge by testing whether the individual and combined type, quantity, and location of habitat affects fish diversity in the upper Neosho River basin, Kansas, as a different approach to measuring habitat heterogeneity. Habitat type mattered in that species richness increased in areas of higher riffle density. Furthermore, variation within habitat type also influenced fish diversity; specifically, slower, shallower riffles had more species of fish. The spatial arrangement (i.e., impact of neighbor habitats) influenced fish diversity patterns in that riffle–run and riffle–glide pairings altered riffle habitat characteristics. The study illustrates a useful approach by measuring the type, amount, and arrangement of habitats to assess fish populations and could be adapted to other stream ecosystems.

Kansas↗
USGS2021

The U.S. Inland Creel and Angler Survey Catalog (CreelCat): Development, applications, and opportunities

Inland recreational fishing, defined as primarily leisure-driven fishing in freshwaters, is a popular pastime in the USA. State natural resource agencies endeavor to provide high-quality and sustainable fishing opportunities for anglers. Managers often use creel and other angler survey data to inform state- and waterbody-level management efforts. Despite the broad implementation of angler surveys and their importance to fisheries management at state scales, regional and national coordination among these activities is minimal, limiting data applicability for larger-scale management practices and research. Here, we introduce the U.S. Inland Creel and Angler Survey Catalog (CreelCat), a first-of-its-kind, publicly available national database of angler survey data that establishes a baseline of national inland recreational fishing metrics. We highlight research and management applications to help support sustainable inland recreational fishing practices, consider cautions, and make recommendations for implementation.

Fisheries Magazine↗
USGS2022

Premature mortality observations among Alaska’s Pacific salmon during record heat and drought in 2019

Widespread mortality of Pacific salmon Oncorhynchus spp. returning to spawn in Alaska coincided with record-breaking air temperatures and prolonged drought in summer 2019. Extreme environmental conditions are expected to happen more frequently with rapid climate change and challenge the notion that Alaska could indefinitely provide abundant, cool freshwater habitat for Pacific salmon. A total of 110 geographically widespread opportunistic observations of premature mortality (carcasses) were collected from a variety of sources. Premature mortalities were documented for Pink Salmon Oncorhynchus gorbuscha , Sockeye Salmon O. nerka , Chum Salmon O. keta , Chinook Salmon O. tshawytscha , and Coho Salmon O. kisutch . Additionally, observations of Pink Salmon returning to spawn in Prince William Sound streams in 2019, obtained from systematic aerial surveys conducted annually, revealed low migration success in 87% of rain-driven streams ( n = 30), 52% of snow-driven streams ( n = 65), and only 18% of glacier-driven streams ( n = 11). Salmon mortality observations were consistent with death due to heat stress resulting from high water temperatures or drought caused hypoxia and stranding. Developing a better understanding of how broad-scale climate patterns manifest at the stream scale can help us determine whether a major shift in Pacific salmon productivity is underway and inform fisheries management plans to better mitigate future risks.

Alaska↗
USGS2023

Synthesizing professional opinion and published science to build a conceptual model of Walleye recruitment

Understanding and predicting recruitment, longstanding goals in fisheries science and ecology, are complicated by variation in the importance of environmental drivers coupled with the dynamic nature of individual ecosystems. Developing an understanding of recruitment from well-monitored stocks offers an opportunity to overcome these complexities. We used a systematic literature review, a survey, and a workshop attended by professionals with expertise in recruitment of Walleye Sander vitreus to identify common environmental drivers of Walleye recruitment and additional sources of variation (i.e., context dependencies) among populations. The importance of individual environmental drivers, as well as the direction of their influence, differed as a function of geographic region, lake surface area, and Walleye life stage. The literature suggested abiotic conditions (e.g., temperature) during the first year of life were influential in determining recruitment. Professional opinion noted the importance of biotic factors, with prey availability and predation risk having the most consistent relationships with recruitment. We synthesized this information to propose a conceptual model that illustrates the suite of characteristics that shape Walleye recruitment over large spatial and temporal scales. Our findings emphasize the importance of first-year growth and system-specific contextual factors, which can alter the relative importance of the environmental drivers of recruitment.

Fisheries Magazine↗
USGS2023

Kings of the North: Bridging disciplines to understand the effects of changing climate on Chinook salmon in the Arctic-Yukon-Kuskokwim Region

Understanding how species are responding to environmental change is a central challenge for stewards and managers of fish and wildlife who seek to maintain harvest opportunities for communities and Indigenous peoples. This is a particularly daunting but increasingly important task in remote, high-latitude regions where environmental conditions are changing rapidly and data collection is logistically difficult. The Arctic-Yukon-Kuskokwim (AYK) region encompasses the northern extent of the Chinook Salmon Oncorhynchus tshawytscha range where populations are experiencing rapid rates of environmental change across both freshwater and marine habitats due to global climate change. Climate–salmon interactions in the AYK region are a particularly pressing issue as many local communities have a deep reliance on a subsistence way of life. Here, we synthesize perspectives shared at a recent workshop on Chinook Salmon declines in the AYK region. The objectives were to discuss current understandings of climate-Chinook Salmon interactions, develop a set of outstanding questions, review available data and its limitations in addressing these questions, and describe the perspectives expressed by participants in this workshop from diverse backgrounds. We conclude by suggesting pathways forward to integrate different types of information and build relationships among communities, academic partners, and fishery management agencies.

Alaska, British Columbia, Yukon↗
USGS2023

Forage fish species prefer habitat within designated offshore wind energy areas on the US Northeast Shelf ecosystem

As the world develops sources of renewable energy, there is an intensifying interest in offshore wind energy production. The Northeast U.S. Continental Shelf (NES) ecosystem has favorable wind dynamics, with active development of wind energy. In this study, we present species distribution models that consider both occupancy and biomass responses for a broad spectrum of fish and macroinvertebrate taxa ( n = 177). Building upon prior analyses, habitat was differentiated into overall and core habitats based on statistical distributions of habitat scores. Overall habitat was used to show each species' regional distribution based on fishery-independent survey captures between 1976 and 2019, whereas core habitat represented where the focus of the species' abundance was located as a subset of overall habitat. Wind energy developments may modify the water column in ways that impact lower-trophic-level productivity; therefore, added attention was given to the response of forage species. Over 20% of species showed preferential use of putative and potential wind development areas, including a disproportionate number of forage taxa. Principal usage varied by season, with forage species like Atlantic Menhaden Brevoortia tyrannus and Atlantic Mackerel Scomber scombrus preferentially using the lease areas in spring and Round Herring Etrumeus teres and longfin inshore squid Doryteuthis pealeii using lease areas in autumn. For species with relatively low usage of the lease areas, there was a tendency for the usage related to overall habitat to be lower than usage for core habitat; in contrast, for species with high usage of the lease areas, that usage was higher for overall habitat than for core habitat. The area of habitat tended to have positive trends across species, with these positive trends being disproportionately higher among forage taxa. These results frame the importance of wind lease areas for species in the NES, particularly forage taxa that fulfill many important ecological functions.

Marine and Coastal Fisheries: Dynamics, Management↗
USGS2024

The use of conceptual ecological models to identify critical data and uncertainties to support numerical modeling: The northern Gulf of Mexico eastern oyster Crassostrea virginica example

Objective Increasing reliance on numerical simulation models to help inform management and restoration choices benefits from careful consideration of critical early steps in model development. Along the northern coast of the Gulf of Mexico, the eastern oyster Crassostrea virginica fulfills important ecological and economic roles. Using the eastern oyster as an example, we draw on several recent frameworks outlining best practices for model development and application for restoration, conservation, and management. Methods We identify priority model questions, outline a conceptual ecological model (CEM) to guide numerical model development, and use this framework to identify uncertainties and research needs. Result The CEM uses a nested design, identifying explicit vital rates, processes, attributes, and outcomes for the species (oysters), population, and metapopulation (i.e., network of populations) levels in response to drivers of species, population, and metapopulation changes and changing environmental factors. Most management actions related to oyster restoration and harvest affect population attributes directly, but many coastal management actions and changes (i.e., climate change and coastal and water resource engineering) impact environmental factors that alter vital rates and attributes of oysters, populations, and metapopulations. Conclusion Investment in studies targeting individual oyster‐ and population‐level multi‐stressor responses (filtration, respiration, growth, and reproduction) and improving hydrodynamic and environmental models targeting drivers that influence metapopulation vital rates and attributes (i.e., connectivity and substrate persistence) would contribute to reducing uncertainties. Development of numerical models covering the entire oyster life cycle and connectivity of populations using hydrodynamic models of current and predicted conditions to provide key abiotic and biotic factors influencing larval movement, recruitment, and on‐reef oyster vital rates would assist in balancing the goals of conservation, restoration, and fisheries management of this foundational estuarine species.

Marine and Coastal Fisheries: Dynamics, Management↗
USGS2018

Effects of summer air exposure on the survival of caught-and-released salmonids

Despite the success of catch‐and‐release regulations, exposing fish to air during release has emerged as a growing concern over the past two decades. We evaluated the effect of air exposure during midsummer on survival of Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri , Bull Trout Salvelinus confluentus , and Rainbow Trout O. mykiss exposed to catch‐and‐release angling. Fish were sampled by angling on Palisades Creek (August 2016), Sawmill Creek, and the Main Fork of the Little Lost River, Idaho (July−August 2017). After capture, fish were kept underwater while they were measured and individually tagged. Anglers, in groups of two to four, caught study fish and gave them an air exposure treatment of 0, 30, or 60 s. Single‐pass backpack electrofishing was then used to recapture tagged fish and estimate relative survival. In total, 328 Yellowstone Cutthroat Trout were sampled (0 s: n = 110; 30 s: n = 110; 60 s: n = 108), 278 Bull Trout (0 s: n = 92; 30 s: n = 94; 60 s: n = 92), and 322 Rainbow Trout (0 s: n = 103; 30 s: n = 106; 60 s: n = 113). The majority of fish were caught using artificial flies (≥92%) and were hooked in the corner of the mouth, lower jaw, or upper jaw (≥78%) in all three species. No difference in survival was observed among air exposure treatments for all three species. Results from the present study along with those from prior field studies of air exposure times during angling suggest that mortality from exposing fish to air for ≤60 s is not likely a population‐level concern in catch‐and‐release fisheries for these species.

Idaho↗
USGS2018

Effectiveness of ultrasonic imaging for evaluating presence and maturity of eggs in fishes in remote field locations

Ultrasonic imaging is an effective, nonlethal method used to determine sex and maturity in a variety of fishes. However, many previous studies of this technique have been performed in laboratory environments. Using Common Carp Cyprinus carpio , we developed a standardized method for ultrasonically scanning cyprinids, and we accurately sexed 78% ( N = 58) of those individuals. We then applied this method to endangered Humpback Chub Gila cypha and obtained 751 scans of Humpback Chub in remote field locations within the Grand Canyon, Arizona. Ultrasonic scanning took less than 1 min per fish to perform, and we identified females containing eggs based on two jpeg images and one 10-s video clip. Using ImageJ software to evaluate ultrasonic scans of ovulatory, captive Humpback Chub, we determined that female fish were potentially ovulatory when scanned eggs exhibited an ImageJ brightness value within the range of 32–44. Although we could successfully evaluate egg maturity, we were unable to estimate egg mass. Fisheries managers can use this noninvasive scanning method or a similar technique in remote field locations to collect ultrasonic scans from cyprinids to determine their reproductive status.

North American Journal of Fisheries Management↗
USGS2018

Changes in growth of Rainbow Trout in a Catskill Mountain Reservoir following Alewife and White Perch Introductions

Rainbow Trout Oncorhynchus mykiss were introduced to the Esopus Creek watershed in the Catskill Mountains of New York in the early 1880s. This introduction created a renowned naturalized fishery that remains important to the local economy today. The objective of this study was to determine whether the growth and condition of Rainbow Trout in the Ashokan Reservoir changed following the establishment of (1) Alewives Alosa pseudoharengus in the 1970s and (2) White Perch Morone americana in the 2000s by analyzing historical scale samples from 502 Rainbow Trout. The resulting data were used to compare length at age, von Bertalanffy growth curves, age‐specific annual growth increments, and relative weight before and after each introduction. Results indicated that growth of Rainbow Trout of ages <5 years generally increased following each introduction, while insufficient data for ages 5 and 6 made trends for older fish unclear. Rainbow Trout of ages ≤2 are believed to primarily use riverine habitats in this watershed, and therefore fish of ages >2 may best reflect reservoir growth. The mean relative weight of Rainbow Trout also increased between each period. The largest increases in both growth and condition were observed during the period after the introduction of White Perch, which was unexpected considering this species may have some diet overlap with Rainbow Trout and should be a poor forage species. Changes in watershed management and density‐dependent growth effects may explain these unexpected results. Our results, which largely suggest increased growth and condition over time, eliminate growth effects as a possible explanation for declining Rainbow Trout populations and suggest recruitment issues in the watershed require further investigation. This study contributes to our understanding of the interactions between introduced species and underscores the value of maintaining long‐term monitoring programs for assessing biological trends.

New York↗
USGS2018

Population characteristics and management of lentic populations of nonnative Burbot in the Green River system, Wyoming

Fishes introduced outside of their native distributions have the potential to negatively affect their recipient ecosystems. Since their illegal introduction into the Green River, Wyoming, in the 1990s, Burbot Lota lota have been sampled in lotic and lentic environments throughout the Green River system where they pose a threat to native fishes and valuable sport fisheries. In response to this invasion, managers of the Green River have begun to explore the efficacy of a suppression effort targeting Burbot. This study sought to the describe population dynamics of Burbot in the lentic portions of the Green River system and compare with Burbot population dynamics in the Green River. We also sought to evaluate potential management scenarios for a suppression program. Burbot for this study were collected from Fontenelle and Flaming Gorge reservoirs in October and November 2016. Growth rates of Burbot in the lentic portion of the system were higher than for fish in the Green River. Total annual mortality rates of Burbot were approximately 10% lower in reservoirs (33%) than for fish in the Green River. Additionally, lentic Burbot matured earlier than lotic Burbot. An age-structured population model indicated that Burbot populations were growing rapidly (λ = 1.18) in the study reservoirs. Annual exploitation of juvenile Burbot would need to reach 7%. Exploitation of mature Burbot would need to increase to 33% or greater (A ≥ 57%) to effectively suppress Burbot in this system. Sensitivity analysis suggested that mortality of age-1 and age-2 Burbot had the greatest influence on population growth rate. However, due to difficulties in collecting juvenile Burbot in the system, focusing removal effort on mature Burbot may be the most realistic option for suppressing Burbot populations in the Green River system.

Wyoming↗