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At least 991 records · Page 55Linked to original sources
USGS1940

A new fungus disease of trout

A new species of fungus, for which time name Saprolegnia invaderis is proposed, was found in fingerling trout at the Leetown (West Virginia) hatchery. Infection occurs through the alimentary tract from which the fungus grows out through the body cavity and the abdominal wall to the exterior, where zoospores and chlamydospores are formed. Growth of the hyphae through the abdominal wall occurs only after the death of the host. A short technical description of the parasite is included.

West Virginia↗
USGS1969

A hematopoietic virus disease of rainbow trout and sockeye salmon

A previously undescribed virus disease epizootic of hatchery rainbow trout ( Salmo gairdneri ) in British Columbia, Canada is presented. In the same locality, a similar virus disease was experienced among hatchery sockeye salmon ( Oncorhynchus nerka ). Typical symptoms included flashing, fecal casts, hemorrhagic areas at the base of fins, and petechial hemorrhages on the visceral fat and membranes in the abdominal cavity. Histopathologic changes were typified by extensive degeneration and necrosis in the hematopoietic tissues of the kidney and spleen. A virus was isolated from both species of fish on tissue culture and the viruses showed cross-infectivity. Based upon the pathological changes in the hematopoietic tissue and the demonstration of a vital infection, a tentative descriptive name was designated Infectious Hematopoietic Necrosis. The isolated viruses were distinctly different from the infectious pancreatic necrosis or viral hemorrhagic septicemia viruses of trout, but did show similarities to the Oregon sockeye and Sacramento River chinook viruses. Positive identification awaits further tests. The significance of these observations is the reporting of a new viral disease of rainbow trout and the extension of the geographic range of sockeye salmon viruses.

Transactions of the American Fisheries Society↗
USGS2011

Application of neural networks to prediction of fish diversity and salmonid production in the Lake Ontario basin

Diversity and fish productivity are important measures of the health and status of aquatic systems. Being able to predict the values of these indices as a function of environmental variables would be valuable to management. Diversity and productivity have been related to environmental conditions by multiple linear regression and discriminant analysis, but such methods have several shortcomings. In an effort to predict fish species diversity and estimate salmonid production for streams in the eastern basin of Lake Ontario, I constructed neural networks and trained them on a data set containing abiotic information and either fish diversity or juvenile salmonid abundance. Twenty percent of the original data were retained as a test data set and used in the training. The ability to extend these neural networks to conditions throughout the streams was tested with data not involved in the network training. The resulting neural networks were able to predict the number of salmonids with more than 84% accuracy and diversity with more than 73% accuracy, which was far superior to the performance of multiple regression. The networks also identified the environmental variables with the greatest predictive power, namely, those describing water movement, stream size, and water chemistry. Thirteen input variables were used to predict diversity and 17 to predict salmonid abundance.

Transactions of the American Fisheries Society↗
USGS2003

Development of a multimetric index for assessing the biological condition of the Ohio River

The use of fish communities to assess environmental quality is common for streams, but a standard methodology for large rivers is as yet largely undeveloped. We developed an index to assess the condition of fish assemblages along 1,580 km of the Ohio River. Representative samples of fish assemblages were collected from 709 Ohio River reaches, including 318 "least-impacted" sites, from 1991 to 2001 by means of standardized nighttime boat-electrofishing techniques. We evaluated 55 candidate metrics based on attributes of fish assemblage structure and function to derive a multimetric index of river health. We examined the spatial (by river kilometer) and temporal variability of these metrics and assessed their responsiveness to anthropogenic disturbances, namely, effluents, turbidity, and highly embedded substrates. The resulting Ohio River Fish Index (ORFIn) comprises 13 metrics selected because they responded predictably to measures of human disturbance or reflected desirable features of the Ohio River. We retained two metrics (the number of intolerant species and the number of sucker species [family Catostomidae]) from Karr's original index of biotic integrity. Six metrics were modified from indices developed for the upper Ohio River (the number of native species; number of great-river species; number of centrarchid species; the number of deformities, eroded fins and barbels, lesions, and tumors; percent individuals as simple lithophils; and percent individuals as tolerant species). We also incorporated three trophic metrics (the percent of individuals as detritivores, invertivores, and piscivores), one metric based on catch per unit effort, and one metric based on the percent of individuals as nonindigenous fish species. The ORFIn declined significantly where anthropogenic effects on substrate and water quality were prevalent and was significantly lower in the first 500 m below point source discharges than at least-impacted sites nearby. Although additional research on the temporal stability of the metrics and index will likely enhance the reliability of the ORFIn, its incorporation into Ohio River assessments still represents an improvement over current physicochemical protocols.

Transactions of the American Fisheries Society↗
USGS2011

Two alternative juvenile life history types for fall Chinook salmon in the Snake River basin

Fall Chinook salmon Oncorhynchus tshawytscha in the Snake River basin were listed under the Endangered Species Act in 1992. At the time of listing, it was assumed that fall Chinook salmon juveniles in the Snake River basin adhered strictly to an ocean-type life history characterized by saltwater entry at age 0 and first-year wintering in the ocean. Research showed, however, that some fall Chinook salmon juveniles in the Snake River basin spent their first winter in a reservoir and resumed seaward movement the following spring at age 1 (hereafter, reservoir-type juveniles). We collected wild and hatchery ocean-type fall Chinook salmon juveniles in 1997 and wild and hatchery reservoir-type juveniles in 1998 to assess the condition of the reservoir-type juveniles at the onset of seaward movement. The ocean-type juveniles averaged 112-139 mm fork length, and the reservoir-type juveniles averaged 222-224 mm fork length. The large size of the reservoir-type juveniles suggested a high potential for survival to salt water and subsequent return to freshwater. Scale pattern analyses of the fall Chinook salmon spawners we collected during 1998-2003 supported this point. Of the spawners sampled, an overall average of 41% of the wild fish and 51% of the hatchery fish had been reservoir-type juveniles. Males that had been reservoir-type juveniles often returned as small "minijacks" (wild, 16% of total; hatchery, 40% of total), but 84% of the wild males, 60% of the hatchery males, and 100% of the wild and hatchery females that had been reservoir-type juveniles returned at ages and fork lengths commonly observed in populations of Chinook salmon. We conclude that fall Chinook salmon in the Snake River basin exhibit two alternative juvenile life histories, namely ocean-type and reservoir-type. ?? Copyright by the American Fisheries Society 2005.

Idaho, Oregon, Washington↗
USGS2012

A barrier to upstream migration in the fish passage of Itaipu Dam (Canal da Piracema), Paraná River basin

The majority of the fish passages built in the Neotropical region are characterised by low efficiency and high selectivity; in many cases, the benefits to fish populations are uncertain. Studies conducted in the Canal da Piracema at Itaipu dam on the Parana River indicate that the system component designated as the Discharge channel in the Bela Vista River (herein named Canal de deságue no rio Bela Vista or CABV), a 200 m long technical section, was the main barrier to the upstream migration. The aim of this study was to evaluate the degree of restriction imposed by the CABV on upstream movements of Prochilodus lineatus and Leporinus elongatus, Characiformes. Fish were tagged with passive integrated transponders (PIT tags) and released both downstream and upstream of this critical section. Individuals of both species released downstream of the CABV took much more time to reach the upper end of the system (43.6 days vs. 15.9 days), and passed in much lower proportions (18% vs. 60.8%) than those tagged upstream of this component. Although more work is needed to differentiate between fishway effects and natural variation in migratory motivation, the results clearly demonstrate passage problems at the CABV.

Itaipu Dam, Paraná River↗
USGS2000

Evidence for a previously unrecognized species of owlet-nightjar

I studied the systematic relationships of the three large owlet-nightjars (Aegothelidae) to determine the taxonomic status of a fawn-colored lowland form currently classified as Aegotheles insignis tatei. I examined most of the existing specimens of A. i. insignis ( n = 158) and A. crinifrons ( n = 23) and all known specimens of A. i. tatei ( n = 4). I also examined specimens of A. albertisi ( n = 70), A. archboldi ( n = 25), A. bennettii ( n = 55), A. cristatus ( n = 50), A. savesi ( n = 1), and A. wallacii ( n = 21). Aegotheles i. tatei was distinguishable from A. i. insignis and A. crinifrons by its small size and in seven plumage characters. Aegotheles i. tatei was further distinguishable from one or the other of these taxa by four additional characters. Unique among owlet-nightjars, A. i. tatei has the shortest tarsi, does not have recurved filamentous tips on its facial feathers, and has stiffer feathers on the auricular area and throat. My search of museums revealed two new specimens of A. i. tatei, expanding the known geographic range of this taxon 1,000 km eastward along the southern coast of Papua New Guinea from the upper Fly River to Nunumai, near the Ulamanu River. Unlike the montane A. i. insignis, A. i. tatei inhabits lowland forests where rivers emerge from foothills of the main cordillera. I propose that tatei be elevated to species status and that the name Starry Owlet-Nightjar be adopted based on the bird's markings. Aegotheles crinifrons, A. insignis, and A. tatei pass through a previously unrecognized but distinctive rufous juvenal plumage. These are the only owlet-nightjars known to exhibit this plumage, which calls for reexamination of generic limits within the Aegothelidae.

The Auk↗
USGS2012

A new species of Lophostoma d'Orbigny, 1836 (Chiroptera: Phyllostomidae) from Panama

We report the discovery of a new species of Lophostoma from Panama, which we name L. kalkoae . This new species resembles L. carrikeri and L. yasuni in possessing a white venter, but is distinguishable from both by external and cranial characteristics. The new species is similar in size to L. carrikeri and L. schulzi . Lophostoma sp. nov. can be most easily recognized by its combination of white venter, postauricular patches connected by a thin line of pale hair to the white fur on the chest, elongated clitoris and swollen labia, less strongly developed lateral projection of mastoid processes, well-marked indentation on the lingual cingulum of the upper canine, well-developed P3, well-developed posterior lingual cusp on the cingulum of P4, and parastyle absent on M1 and M2. We present a dichotomous key for the genus Lophostoma and a map showing all the localities where white-bellied Lophostoma have been recorded.

Journal of Mammalogy↗
USGS2012

Taxonomic status and relationships of Sorex obscurus parvidens Jackson, 1921, from California

The San Bernardino shrew, Sorex obscurus parvidens Jackson, 1921, is a population inhabiting the San Bernardino and San Gabriel mountains of southern California. For the past 9 decades, this population has been considered either a subspecies of S. obscurus Merriam, 1895, S. vagrans Baird, 1857, or S. monticola Merriam, 1890; or an undifferentiated population of S. ornatus Merriam, 1895. Aside from the changing taxonomic landscape that contextualizes the genus Sorex, previous study of S. obscurus parvidens has been retarded by the perception of limited available samples (typically, fewer than 8 specimens); misinterpretation of the provenance of specimens identified as S. obscurus parvidens; misunderstanding of the type locality; and inclusion of specimens of this taxon in the type series of another species with which S. obscurus parvidens has been both contrasted and allied at different times. My investigation of S. obscurus parvidens indicates that it is a distinctive population that is morphologically closest to S. ornatus, and it corresponds to the Southern Clade of that species. However, the appropriate names for deep clades within S. ornatus remain uncertain. Until this uncertainty is resolved, S. obscurus parvidens should be considered a distinctive population within S. ornatus; for conservation purposes, it should be recognized as S. ornatus parvidens.

California↗
USGS2013

Oryx callotis (Artiodactyla: Bovidae)

Oryx callotis O. Thomas, 1982 (fringe-eared oryx) is a relatively large, long-bodied bovid, with an appropriate common name because of its distinguishing tufts of hair extending from the ends of the ears. It occupies arid lands in Kenya and Tanzania. O. callotis can go up to a month without drinking water if succulent vegetation is available. Some herds have been semidomesticated, and 60% of the presumed 17,000 wild individuals exist in wildlife reserves, currently receiving some protection from settlement and poaching. O. callotis is considered “Vulnerable” by the International Union for Conservation of Nature and Natural Resources but as a subspecies of O. beisa , which is listed as “Near Threatened.”

Mammalian Species↗
USGS2018

At-sea observations of marine birds and their habitats before and after the 2008 eruption of Kasatochi volcano, Alaska

Kasatochi volcano, an island volcano in the Aleutian chain, erupted on 7-8 August 2008. The resulting ash and pyroclastic flows blanketed the island, covering terrestrial habitats. We surveyed the marine environment surrounding Kasatochi Island in June and July of 2009 to document changes in abundance or distribution of nutrients, fish, and marine birds near the island when compared to patterns observed on earlier surveys conducted in 1996 and 2003. Analysis of SeaWiFS satellite imagery indicated that a large chlorophyll-a anomaly may have been the result of ash fertilization during the eruption. We found no evidence of continuing marine fertilization from terrestrial runoff 10 months after the eruption. At-sea surveys in June 2009 established that the most common species of seabirds at Kasatochi prior to the eruption, namely crested auklets (Aethia cristatella) and least auklets (Aethia pusilla) had returned to Kasatochi in relatively high numbers. Densities from more extensive surveys in July 2009 were compared with pre-eruption densities around Kasatochi and neighboring Ulak and Koniuji islands, but we found no evidence of an eruption effect. Crested and least auklet populations were not significantly reduced by the initial explosion and they returned to attempt breeding in 2009, even though nesting habitat had been rendered unusable. Maps of pre- and post-eruption seabird distribution anomalies indicated considerable variation, but we found no evidence that observed distributions were affected by the 2008 eruption. ?? 2010 Regents of the University of Colorado.

Arctic, Antarctic, and Alpine Research↗
USGS2000

Stiptognathus new genus (Conodonta: Ibexian, Lower Ordovician), and the apparatus of Stiptognathus borealis (Repetski, 1982)

Collections from upper Ibexian (Tulean Stage) rocks of western United States, from the Canning Basin in western Australia, and from the Argentine Precordillera contain a seximembrate apparatus of multidenticulate conodonts whose elements have been included by authors in species of Prioniodus Pander, 1986, and Reunerodus Serpagli, 1974. The individual elements as well as the complete apparatus are not consistent with assignment of the species to either of these genera or to any other extant genus. A new generic name, Stiptognathus Ethington, Lehnert, and Repetski, is proposed with Reutterodus borealis Repetski, 1982, as type species. The apparatus consists of Pa, Pb, Sa-c, and M elements; the genus represents either the Prioniodontidae or the Periodontidae.

Argentine Precordillera, Canning Basin↗
USGS2016

Phylogenetics, systematics, paleoecology, and evolution of the trilobite genera Paladin and Kaskia from the United States

Late Mississippian and earliest Pennsylvanian trilobite faunas of North America are dominated by the Paladin and Kaskia clades. Phylogenetic analysis of middle Carboniferous species of these clades demonstrates the close ancestral relationship between these groups. The Kaskia clade consists of eight species: K. chesterensis Weller, 1936, K. osagensis (Cisne, 1967), K. longispina (Strong, 1872), K. wilsoni (Walter, 1924), K. genevievensis (Walter, 1924), K. rosei (Cisne, 1967), K. gersnai n. sp., and K. rollinsi n. sp. Kaskia Weller, 1936 ranges from late Osagean to middle Chesterian (early Visean-early Serpukhovian) and is restricted to cyclothemic shelf and nearshore deposits. Species of Kaskia appear to have evolved in areas of shallow water and high environmental stress. The Paladin clade consists of 12 species including previously named species P. morrowensis (Mather, 1915), P. girtyianus Hahn and Hahn, 1970, P. rarus Whittington, 1954, P. helmsensis Whittington, 1954, and P. moorei (Branson, 1937). New species belonging to this clade are Paladin moorefieldensis n. sp., P. pleisiomorphus n. sp., P. imoensis n. sp., P. mangeri n. sp., and P. wapanukaensis n. sp. This group ranges from the early Chesterian to early Morrowan (late Viseanlate Bashkirian). Species of Paladin appear to be confined to outer shelf shelf-edge and off-shelf facies where presumably deeper water environments existed. This is manifested in their paleogeographic distribution, which is paleoenvironmentally controlled. Copyright ?? 2008, The Paleontological Society.

Journal of Paleontology↗
USGS2015

New fusulinids from Lower Permian turbidites at Conglomerate Mesa, southeastern inyo Mountains, east-central California

Seven previously unrecognized fusulinid species from Lower Permian (Wolfcampian and Leonardian) turbidites near Conglomerate Mesa in east-central California, four of which are named as new species, are here described and figured. The four new species are Schwagerina merriami, S. wildei, Parafusulina mackevetti, and Skinnerella rossi. These fusulinid species have close affinities to similar taxa in Texas and northeastern Nevada, and they are distinct from some other faunas of slightly different age in the Conglomerate Mesa area that are dominated by endemic species and other species with Eastern Klamath Mountains affinities.

California↗
USGS2007

Velafrons coahuilensis , a new labeosaurine haddrosaurid (Dinosauria: Ornithopoda) from the Late Campanian Cerro del Pueblo formation, Coahuila, Mexico

A new lambeosaurine hadrosaurid, Velafrons coahuilensis , is described as the first lambeosaurine from the Cerro del Pueblo Formation of Coahuila, Mexico, and the first lambeosaurine genus to be named from North America in more than 70 years. Although the holotype specimen is a juvenile individual—as evidenced by its incomplete crest development and relative size compared to other North American lambeosaurines—ontogeny independent autapomor-phies have been identified including quadrate with narrow quadratojugal notch and a postorbital with well developed, dorsally positioned squamosal process. Additionally, this taxon is unique in that the prefrontal is not dorsally deflected and anteroposteriorly expanded as in other lambeosaurine taxa of its size, but rather retains the frontal-prefrontal “clamp” present in smaller individuals of other taxa. Phylogenetic analysis places Velafrons in a polytomy with numerous other fan-crested lambeosaurines. The crest structure of Velafrons more closely resembles that of Corythosaurus and Hypacrosaurus because it possesses an anteriorly projecting nasal process over the dorsal premaxilla process. Biogeo-graphically, Velafrons is one of three distinct hadrosaurids known from approximately 73.5 Ma—two lambeosaurines and one hadrosaurine—all restricted to the southern region of the Western Interior Basin of North America.

Coahuila↗
USGS2009

Cumulative impacts of hurricanes on Florida mangrove ecosystems: Sediment deposition, storm surges and vegetation

Hurricanes have shaped the structure of mangrove forests in the Everglades via wind damage, storm surges and sediment deposition. Immediate effects include changes to stem size-frequency distributions and to species relative abundance and density. Long-term impacts to mangroves are poorly understood at present. We examine impacts of Hurricane Wilma on mangroves and compare the results to findings from three previous storms (Labor Day, Donna, Andrew). Surges during Wilma destroyed ??? 1,250 ha of mangroves and set back recovery that started following Andrew. Data from permanent plots affected by Andrew and Wilma showed no differences among species or between hurricanes for stem mortality or basal area lost. Hurricane damage was related to hydro-geomorphic type of forest. Basin mangroves suffered significantly more damage than riverine or island mangroves. The hurricane by forest type interaction was highly significant. Andrew did slightly more damage to island mangroves. Wilma did significantly more damage to basin forests. This is most likely a result of the larger and more spatially extensive storm surge produced by Wilma. Forest damage was not related to amount of sediment deposited. Analyses of reports from Donna and the Labor Day storm indicate that some sites have recovered following catastrophic disturbance. Other sites have been permanently converted into a different ecosystem, namely intertidal mudflats. Our results indicate that mangroves are not in a steady state as has been recently claimed. ?? 2009 The Society of Wetland Scientists.

Wetlands↗
USGS2001

CWB free-field strong-motion data from the 21 September Chi-Chi, Taiwan, earthquake

The Chi-Chi earthquake occurred at 17:47 on 20 September 1999 and is the largest earthquake ( M W 7.6) to have occurred on land in Taiwan in the twentieth century. This earthquake caused considerable damage and was named the “921 Chi-Chi Great Earthquake” by the Taiwan government, as the local date was 21 September. Because an extensive strong-motion instrumentation program in Taiwan was completed by the Central Weather Bureau (CWB) in 1996, over 30,000 digital strong-motion records have been obtained from the Chi-Chi earthquake and thousands of its aftershocks. These records form the largest set of strong-motion data recorded from a major earthquake since strong-motion seismology studies began in the 1930s. This data set is important to seismology and earthquake engineering because it includes over 60 recording sites within 20 km of the fault ruptures, which provides a five-fold increase of such near-field records available for the entire world.

Bulletin of the Seismological Society of America↗
USGS2001

Data files from “CWB Free-Field Strong-Motion Data from the 21 September Chi-Chi, Taiwan, Earthquake”

The Central Weather Bureau (CWB) of Taiwan completed a deployment of 1200 modern digital strong-motion instruments in 1996 at free-field sites and in buildings and bridges. Consequently, a very extensive set of strong-motion records were obtained for the M W = 7.6 Chi-Chi earthquake in 1999, including over 60 near-field records within 20 km of the fault ruptures. For documentation purposes, we included all relevant data files on the attached CD-ROM from our article, “CWB Free-Field Strong-Motion Data from the 21 September Chi-Chi, Taiwan, Earthquake” in this issue. We presented the data in four different ways to make the data more user friendly: (1) the original recorded data by accelerograph type; (2) the processed data in ASCII text format; (3) the processed data in SUDS format; and (4) the processed data in SAC format. (1)-(3) are exactly the same as in Lee et al. ( 2001 ), except the files are zipped (or compressed). (4) is provided for users using the SAC software on a Unix computer, and it also contains waveform plots of the data in PDF files for ease of viewing. The attached CD contains the full report of Lee et al. ( 2001 ) in 25 PDF files for viewing or printing. This full report described the data set and the data processing performed in details. It also contains plots of all processed data with an index map showing the fault, mainshock location, and the station location. We also provided a readme.txt on the CDROM to augment this Short Note with further explanations. We classify the recorded data files into four quality groups. Since the recorded strong-motion data are based on a triggering algorithm, a main concern is the amount of pre-event data and whether or not the record is long enough to cover the entire duration of the ground shaking at that station. In addition, we are concerned whether or not the record has defects (e.g., spikes, or a component was not recorded), and whether or not the record has absolute timing. In general, QA-class records are the best and can be used for any studies. QB-class records are the next best, except most of them do not have absolute timing. QC-class records cover the principal strong motions but may not have adequate pre-event data and/or post strong-motion data. QD-class records have some defects; they are included here for completeness and should not be used for most studies. Since most A800 accelerographs have a colocated A900 or A900A accelerograph, the user should use the A900 or A900A data files whenever possible. There are a readme file and six subdirectories containing the data files described in our article on the attached CDROM, under the directory of \LeeWHK: (1) readme.txt: an ASCII text file of this Short Note and additional explanations. (2) DOCfiles (subdirectory): documentary files in PDF format for viewing, and some files in ASCII text format for use in data processing. User should view or print the Reportxx.pdf files which describe the Chi-Chi strong-motion data set in details (xx is a number from 01 through 25). (3) Software (subdirectory): containing computer programs from the accelerograph manufacturers for viewing and converting the original recorded data; they are grouped by manufacturer. (4) ORGfiles (subdirectory): the original recorded data files grouped by accelerograph types; these files are for archival purposes only. (5) SUDfiles (subdirectory): the processed strong-motion data files in PC-SUDS format, and are grouped by quality class. (6) ASCfiles (subdirectory): the processed strong-motion data files are in ASCII text format and are grouped by quality class. (7) SACfiles (subdirectory): the processed strong-motion data files are in SAC format and are grouped by quality class. Within each quality class, the data are given by station. Each station has two files—xxx.pdf for viewing the three-component strong-motion data, and xxx_SAC.zip, a WINZIP file containing three SAC data files corresponding to the three components of the recorded acceleration. We use “xxx” here to denote the station name.

Bulletin of the Seismological Society of America↗