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USGS1992

Changes in Alaskan soft-bottom prey communities along a gradient in sea otter predation

Sea Otter ( Enhydra lutris ), well documented as "keystone" predators in rocky marine communities, were found to exert a strong influence on infaunal prey communities in soft-sediment habitats. Direct and indirect effects of sea otter predation on subtidal soft-bottom prey communities were evaluated along a temporal gradient of sea otter occupancy around the Kodiak Archipelago. The results indicate that Kodiak otters forage primarily on bivalve prey and dramatically reduce infaunal bivalve and green sea urchin ( Strongylocentrotus droebachiensis ) prey populations. Bivalve prey abundance, biomass, and size were inversely related to duration of sea otter occupancy. The relative conditions of shells discarded by otters in shallow (<10 m) vs. deep (> 20 m) water at the same sites indicate that otters first exploited Saxidomus in shallow-water feeding areas, and later switched to Macoma spp. in deeper water. Otter-cracked shells of the deep-burrowing clam Tresus capax were rarely found, even at otter foraging sites where the clam accounted for the majority of available prey biomass, suggesting that it has a partial depth refuge from otter predation. The indirect effects of otter predation included substratum disturbance and the facilitation of sea star predation on infaunal prey. Sea stars, Pycnopodia helianthoides , were attracted to experimentally dug excavations as well as natural sea otter foraging pits, where the sea stars foraged on smaller size classes of infaunal bivalves than those eaten by otters. Otters also discard clam shells on the sediment surface and expose old, buried shells during excavation. Surface shells were found to provide attachment sites for large anemones and kelp. Our study shows that sea otters can affect soft-sediment communities, not only through predation, as in rocky habitats, but also through disturbance, and thus retain a high degree of influence in two very different habitat types.

Alaska↗

USGS2021

Scalability and performance tradeoffs in quantifying relationships between elevation and tidal wetland plant communities

Elevation is a major driver of plant ecology and sediment dynamics in tidal wetlands, so accurate and precise spatial data are essential for assessing wetland vulnerability to sea-level rise and making forecasts. We performed survey-grade elevation and vegetation surveys of the Global Change Research Wetland, a brackish microtidal wetland in the Chesapeake Bay estuary, Maryland (USA), to both intercompare unbiased digital elevation model (DEM) creation techniques and to describe niche partitioning of several common tidal wetland plant species. We identified a tradeoff between scalability and performance in creating unbiased DEMs, with more data-intensive methods such as kriging performing better than 3 more scalable methods involving post-processing of light detection and ranging (LiDAR)-based DEMs. The LiDAR Elevation Correction with Normalized Difference Vegetation Index (LEAN) method provided a compromise between scalability and performance, although it underpredicted variability in elevation. In areas where native plants dominated, the sedge Schoenoplectus americanus occupied more frequently flooded areas (median: 0.22, 95% range: 0.09 to 0.31 m relative to North America Vertical Datum of 1988 [NAVD88]) and the grass Spartina patens , less frequently flooded (0.27, 0.1 to 0.35 m NAVD88). Non-native Phragmites australis dominated at lower elevations more than the native graminoids, but had a wide flooding tolerance, encompassing both their ranges (0.19, -0.05 to 0.36 m NAVD88). The native shrub Iva frutescens also dominated at lower elevations (0.20, 0.04 to 0.30 m NAVD88), despite being previously described as a high marsh species. These analyses not only provide valuable context for the temporally rich but spatially restricted data collected at a single well-studied site, but also provide broad insight into mapping techniques and species zonation.

Maryland↗

USGS2016

Demography of an apex predator at the edge of its range: impacts of changing sea ice on polar bears in Hudson Bay

Changes in the abundance and distribution of wildlife populations are common consequences of historic and contemporary climate change. Some Arctic marine mammals, such as the polar bear ( Ursus maritimus ), may be particularly vulnerable to such changes due to the loss of Arctic sea ice. We evaluated the impacts of environmental variation on demographic rates for the Western Hudson Bay (WH), polar bear subpopulation from 1984 to 2011 using live-recapture and dead-recovery data in a Bayesian implementation of multistate capture–recapture models. We found that survival of female polar bears was related to the annual timing of sea ice break-up and formation. Using estimated vital rates (e.g., survival and reproduction) in matrix projection models, we calculated the growth rate of the WH subpopulation and projected population responses under different environmental scenarios while accounting for parametric uncertainty, temporal variation, and demographic stochasticity. Our analysis suggested a long-term decline in the number of bears from 1185 (95% Bayesian credible interval [BCI] = 993–1411) in 1987 to 806 (95% BCI = 653–984) in 2011. In the last 10 yr of the study, the number of bears appeared stable due to temporary stability in sea ice conditions (mean population growth rate for the period 2001–2010 = 1.02, 95% BCI = 0.98–1.06). Looking forward, we estimated long-term growth rates for the WH subpopulation of ~1.02 (95% BCI = 1.00–1.05) and 0.97 (95% BCI = 0.92–1.01) under hypothetical high and low sea ice conditions, respectively. Our findings support previous evidence for a demographic linkage between sea ice conditions and polar bear population dynamics. Furthermore, we present a robust framework for sensitivity analysis with respect to continued climate change (e.g., to inform scenario planning) and for evaluating the combined effects of climate change and management actions on the status of wildlife populations.

Hudson Bay↗

USGS2016

Can you hear me now? Range-testing a submerged passive acoustic receiver array in a Caribbean coral reef habitat

Submerged passive acoustic technology allows researchers to investigate spatial and temporal movement patterns of many marine and freshwater species. The technology uses receivers to detect and record acoustic transmissions emitted from tags attached to an individual. Acoustic signal strength naturally attenuates over distance, but numerous environmental variables also affect the probability a tag is detected. Knowledge of receiver range is crucial for designing acoustic arrays and analyzing telemetry data. Here, we present a method for testing a relatively large-scale receiver array in a dynamic Caribbean coastal environment intended for long-term monitoring of multiple species. The U.S. Geological Survey and several academic institutions in collaboration with resource management at Buck Island Reef National Monument (BIRNM), off the coast of St. Croix, recently deployed a 52 passive acoustic receiver array. We targeted 19 array-representative receivers for range-testing by submersing fixed delay interval range-testing tags at various distance intervals in each cardinal direction from a receiver for a minimum of an hour. Using a generalized linear mixed model (GLMM), we estimated the probability of detection across the array and assessed the effect of water depth, habitat, wind, temperature, and time of day on the probability of detection. The predicted probability of detection across the entire array at 100 m distance from a receiver was 58.2% (95% CI: 44.0–73.0%) and dropped to 26.0% (95% CI: 11.4–39.3%) 200 m from a receiver indicating a somewhat constrained effective detection range. Detection probability varied across habitat classes with the greatest effective detection range occurring in homogenous sand substrate and the smallest in high rugosity reef. Predicted probability of detection across BIRNM highlights potential gaps in coverage using the current array as well as limitations of passive acoustic technology within a complex coral reef environment.

Ecology and Evolution↗

USGS2006

Denitrification across landscapes and waterscapes: A synthesis

Denitrification is a critical process regulating the removal of bioavailable nitrogen (N) from natural and human-altered systems. While it has been extensively studied in terrestrial, freshwater, and marine systems, there has been limited communication among denitrification scientists working in these individual systems. Here, we compare rates of denitrification and controlling factors across a range of ecosystem types. We suggest that terrestrial, freshwater, and marine systems in which denitrification occurs can be organized along a continuum ranging from (1) those in which nitrification and denitrification are tightly coupled in space and time to (2) those in which nitrate production and denitrification are relatively decoupled. In aquatic ecosystems, N inputs influence denitrification rates whereas hydrology and geomorphology influence the proportion of N inputs that are denitrified. Relationships between denitrification and water residence time and N load are remarkably similar across lakes, river reaches, estuaries, and continental shelves. Spatially distributed global models of denitrification suggest that continental shelf sediments account for the largest portion (44%) of total global denitrification, followed by terrestrial soils (22%) and oceanic oxygen minimum zones (OMZs; 14%). Freshwater systems (groundwater, lakes, rivers) account for about 20% and estuaries 1% of total global denitrification. Denitrification of land-based N sources is distributed somewhat differently. Within watersheds, the amount of land-based N denitrified is generally highest in terrestrial soils, with progressively smaller amounts denitrified in groundwater, rivers, lakes and reservoirs, and estuaries. A number of regional exceptions to this general trend of decreasing denitrification in a downstream direction exist, including significant denitrification in continental shelves of N from terrestrial sources. Though terrestrial soils and groundwater are responsible for much denitrification at the watershed scale, per-area denitrification rates in soils and groundwater (kg N·km −2 ·yr −1 ) are, on average, approximately one-tenth the per-area rates of denitrification in lakes, rivers, estuaries, continental shelves, or OMZs. A number of potential approaches to increase denitrification on the landscape, and thus decrease N export to sensitive coastal systems exist. However, these have not generally been widely tested for their effectiveness at scales required to significantly reduce N export at the whole watershed scale.

Ecological Applications↗

USGS2013

Foraging area fidelity for Kemp's ridleys in the Gulf of Mexico

For many marine species, locations of key foraging areas are not well defined. We used satellite telemetry and switching state-space modeling (SSM) to identify distinct foraging areas used by Kemp's ridley turtles ( Lepidochelys kempii ) tagged after nesting during 1998–2011 at Padre Island National Seashore, Texas, USA (PAIS; N = 22), and Rancho Nuevo, Tamaulipas, Mexico (RN; N = 9). Overall, turtles traveled a mean distance of 793.1 km (±347.8 SD) to foraging sites, where 24 of 31 turtles showed foraging area fidelity (FAF) over time (N = 22 in USA, N = 2 in Mexico). Multiple turtles foraged along their migratory route, prior to arrival at their "final" foraging sites. We identified new foraging "hotspots" where adult female Kemp's ridley turtles spent 44% of their time during tracking (i.e., 2641/6009 tracking days in foraging mode). Nearshore Gulf of Mexico waters served as foraging habitat for all turtles tracked in this study; final foraging sites were located in water <68 m deep and a mean distance of 33.2 km (±25.3 SD) from the nearest mainland coast. Distance to release site, distance to mainland shore, annual mean sea surface temperature, bathymetry, and net primary production were significant predictors of sites where turtles spent large numbers of days in foraging mode. Spatial similarity of particular foraging sites selected by different turtles over the 13-year tracking period indicates that these areas represent critical foraging habitat, particularly in waters off Louisiana. Furthermore, the wide distribution of foraging sites indicates that a foraging corridor exists for Kemp's ridleys in the Gulf. Our results highlight the need for further study of environmental and bathymetric components of foraging sites and prey resources contained therein, as well as international cooperation to protect essential at-sea foraging habitats for this imperiled species.

Ecology and Evolution↗

USGS2024

Testing food web theory in a large lake: The role of body size in habitat coupling in Lake Michigan

The landscape theory of food web architecture (LTFWA) describes relationships among body size, trophic position, mobility, and energy channels that serve to couple heterogenous habitats, which in turn promotes long-term system stability. However, empirical tests of the LTFWA are rare and support differs among terrestrial, freshwater, and marine systems. Further, it is unclear whether the theory applies in highly altered ecosystems dominated by introduced species such as the Laurentian Great Lakes. Here, we provide an empirical test of the LTFWA by relating body size, trophic position, and the coupling of different energy channels using stable isotope data from species throughout the Lake Michigan food web. We found that body size was positively related to trophic position, but for a given trophic position, organisms predominately supported by pelagic energy had smaller body sizes than organisms predominately supported by nearshore benthic energy. We also found a hump-shaped trophic relationship in the food web where there is a gradual increase in the coupling of pelagic and nearshore energy channels with larger body sizes as well as higher trophic positions. This highlights the important role of body size and connectivity among habitats in structuring food webs. However, important deviations from expectations are suggestive of how species introductions and other anthropogenic impacts can affect food web structure in large lakes. First, native top predators appear to be flexible couplers that may provide food web resilience, whereas introduced top predators may confer less stability when they specialize on a single energy pathway. Second, some smaller bodied prey fish and invertebrates, in addition to mobile predators, coupled energy from pelagic and nearshore energy channels, which suggests that some prey species may also be important integrators of energy pathways in the system. We conclude that patterns predicted by the LTFWA are present in the face of species introductions and other anthropogenic stressors to a degree, but time-series evaluations are needed to fully understand the mechanisms that promote stability.

Lake Michigan↗

USGS2007

An evaluation of the effects of conservation and fishery enhancement hatcheries on wild populations of salmon

The historical, political and scientific aspects of salmon hatchery programmes designed to enhance fishery production, or to recover endangered populations, are reviewed. We start by pointing out that the establishment of hatcheries has been a political response to societal demands for harvest and conservation; given this social context, we then critically examined the levels of activity, the biological risks, and the economic analysis associated with salmon hatchery programmes. A rigorous analysis of the impacts of hatchery programmes was hindered by the lack of standardized data on release sizes and survival rates at all ecological scales, and since hatchery programme objectives are rarely defined, it was also difficult to measure their effectiveness at meeting release objectives. Debates on the genetic effects of hatchery programmes on wild fish have been dominated by whether correct management practices can reduce negative outcomes, but we noted that there has been an absence of programmatic research approaches addressing this important issue. Competitive interactions between hatchery and wild fish were observed to be complex, but studies researching approaches to reduce these interactions at all ecological scales during the entire salmon life history have been rare, and thus are not typically considered in hatchery management. Harvesting of salmon released from fishery enhancement hatcheries likely impacts vulnerable wild populations; managers have responded to this problem by mass marking hatchery fish, so that fishing effort can be directed towards hatchery populations. However, we noted that the effectiveness of this approach is dependant on accurate marking and production of hatchery fish with high survival rates, and it is not yet clear whether selective fishing will prevent overharvest of wild populations. Finally, research demonstrating disease transmission from hatchery fish to wild populations was observed to be equivocal; evidence in this area has been constrained by the lack of effective approaches to studying the fate of pathogens in the wild. We then reviewed several approaches to studying the economic consequences of hatchery activities intended to inform the social decisions surrounding programmes, but recognized that placing monetary value on conservation efforts or on hatcheries that mitigate cultural groups’ loss of historical harvest opportunities may complicate these analyses. We noted that economic issues have rarely been included in decision making on hatchery programmes. We end by identifying existing major knowledge gaps, which, if filled, could contribute towards a fuller understanding of the role that hatchery programmes could play in meeting divergent goals. However, we also recognized that many management recommendations arising from such research may involve trade-offs between different risks, and that decisions about these trade-offs must occur within a social context. Hatcheries have played an important role in sustaining some highly endangered populations, and it is possible that reform of practices will lead to an increase in the number of successful programmes. However, a serious appraisal of the role of hatcheries in meeting broader needs is urgently warranted and should take place at the scientific, but more effectively, at the societal level.

Advances in Marine Biology↗

USGS2017

Population-level plasticity in foraging behavior of western gulls (Larus occidentalis)

Background Plasticity in foraging behavior among individuals, or across populations may reduce competition. As a generalist carnivore, western gulls ( Larus occidentalis ) consume a wide range of marine and terrestrial foods. However, the foraging patterns and habitat selection (ocean or land) of western gulls is not well understood, despite their ubiquity in coastal California. Here, we used GPS loggers to compare the foraging behavior and habitat use of western gulls breeding at two island colonies in central California. Results Gulls from offshore Southeast Farallon Island (SFI; n = 41 gulls) conducted more oceanic trips ( n = 90) of shorter duration (3.8 ± 3.3 SD hours) and distance (27.1 ± 20.3 km) than trips to the mainland ( n = 41) which were nearly 4 times longer and 2 times farther away. In contrast, gulls from coastal Año Nuevo Island (ANI; n = 20 gulls) foraged at sites on land more frequently ( n = 103) but trip durations (3.6 ± 2.4 h) and distances (20.8 ± 9.4 km) did not differ significantly from oceanic trips ( n = 42) where trip durations were only slightly shorter (2.9 ± 2.7 h) and equidistant (20.6 ± 12.1 km). Gulls from both colonies visited more sites while foraging at sea but spent significantly longer (3–5 times) durations at each site visited on land. Foraging at sea was also more random compared to foraging trips over land where gulls from both colonies visited the same sites on multiple trips. The total home range of gulls from SFI (14,230 km 2 ) was 4.5 times larger than that of gulls from ANI, consistent with greater resource competition resulting from a larger abundance of seabirds at SFI. Conclusions Population-level plasticity in foraging behavior was evident and dependent on habitat type. In addition, gulls from SFI were away foraging longer than gulls from ANI (22% vs. 7.5%, respectively), which impacts the defense of territories and attempts at nest predation by conspecifics. Our results can be used to explain lower chick productivity at SFI, and can provide insight into increased gull activity in urban areas.

Movement Ecology↗

USGS2023

Spatial and individual factors mediate the tissue burden of polycyclic aromatic hydrocarbons in adult and chick brown pelicans in the northern Gulf of Mexico

The northern Gulf of Mexico supports a substantial level of oil and gas extraction in marine waters and experiences acute and chronic exposure to marine pollution events. The region also supports a diverse array of breeding and migratory seabirds that are exposed to these pollutants during foraging and other activities. Among the pollutants of highest concern within the region are polycyclic aromatic hydrocarbons (PAHs) which tend to be toxic, carcinogenic, mutagenic, or teratogenic. We assessed PAH loads in blood from adult brown pelicans and from feathers of adults and chicks of brown pelicans in relation to individual (e.g., body condition, sex) and spatial (e.g., breeding location within the Gulf, home range size, migration distance) factors. Of the 24 PAHs assessed, 17 occurred at least once among all samples. There were no PAHs found in chicks that were not also found in adults. Alkylated PAHs occurred more commonly and were measured at higher summed concentrations compared to parent PAHs in all samples, indicating that exposure to oil and/or byproducts of oil may have been a substantial source of PAH contamination for brown pelicans during this study. Within adults, PAHs were more likely to occur, and to increase in concentration, in blood samples of females compared to males, although no difference was found in feather samples. We also found that occurrence of and concentration of PAHs increased in adults that migrated longer distances. In adults and chicks, the background levels of oil and gas development within the region of the colony was not a consistent predictor of the presence of or concentration of PAHs. We also found correlations of PAHs with hematological and biochemical biomarkers that suggested compromised health. Our results indicate that both short- and long-term exposure (i.e., blood and feathers, respectively) are occurring for this species and that even nest-bound chicks can accumulate high levels of PAHs. Long-term tracking of PAHs, as well as an assessment of sublethal effects of PAHs on pelicans, could enhance our understanding of the persistence and effects of this contaminant in the northern Gulf as could increasing the breadth of species studied.

Frontiers in Ecology and Conservation↗

USGS2003

Marine reserve design for conservation and fisheries management: a case study from the California Channel Islands

Five races of cottontail rabbits belonging to three species occur in Virginia. One of them, the Mearns cottontail (Sylvilagus floridanus mearnsi), is reported here for the first time. It occurs in six southwestern counties of the state, while the eastern cottontail (S. f. mallurus) occurs in the remainder of the state with the exception of Smith and Fishermans islands off the eastern coast of Cape Charles, where it is replaced by Hitchens cottontail (S. f. hitchensi). The New England cottontail (S. transitionalis) is found on the higher mountain peaks, above 3000 feet, and the swamp rabbit (S. palustris) occurs in the Dismal Swamp region of southeastern Virginia.....The height of the breeding season for the eastern cottontail in Virginia is March and April, but breeding continues through the entire year except in December and January. The average litter size based on embryo counts was 4.7. The sex ratio of 234 specimens from all parts of the state, taken mostly in the December to February period, was 53 males to 47 females. That of a group of 145 rabbits live-trapped at Blacksburg during February and Marchwas 58 males to 42 females. The figures show that males are more active than females during the winter months, and therefore are more easily taken then....In transplanting cottontails from one section of the state to another, it is recommended that only cottontails of the same race as those originally present in the region being restocked be released there....Tularemia is not a common disease among rabbits in Virginia, but the rabbit ticks are often carriers of the disease and may transmit it to rabbits. Rabbit ticks are also found to be carriers of Rocky Mountain fever and American Q. fever. After the ticks drop off the rabbits to hibernate in the ground, which is likely to occur during mid-winter in Virginia, there is relatively little danger of humans contracting tularemia by contact with rabbits. Present laws in Virginia which prohibit rabbit hunting until the opening of the general hunting season, November 15and November 20--west and east of the Blue Ridge Mountains, respectively--protect the licensed hunters to which these regulations apply, but landowners or tenants are still allowed to take rabbits for their own use on their own land at any time. It is recommended that as a public health measure the taking of cottontails be completely prohibited to all until the opening of the general hunting season.

Ecological Applications↗

USGS1999

The ecological condition of estuaries in the Gulf of Mexico

The Gulf of Mexico is a vast natural resource encompassing the coastal areas of western Florida, Alabama, Mississippi, Louisiana, and Texas, as well as a portion of Mexico. Many estuaries flow into the Gulf of Mexico and serve as nursery grounds for fish, habitat for a wide variety of wildlife, shipping routes, and a source of recreation. Estuarine-dependent species constitute more than 95 percent of the commercial fishery harvests from the Gulf of Mexico, and many important recreational fishery species depend on estuaries during some part of their life cycle. Gulf estuaries are diverse and productive ecosystems that provide a variety of valuable resources, including fish and shellfish, recreation, transportation, and water supply. Assessing the overall condition of Gulf of Mexico estuaries required incorporating data from other federal, state, and local monitoring programs to augment the information on ecological indicators collected by the U.S. Environmental Protection Agency’s (USEPA) Environmental Monitoring and Assessment Program (EMAP). The resulting document would provide a synthesis of the available knowledge about the condition of Gulf of Mexico estuaries. This document is intended for use by scientists and other citizens concerned with the ecological condition of estuaries, as well as by managers and lawmakers interested in the sustained use of estuaries for commercial and recreational purposes. It also addresses public concerns about the aesthetic quality of coastal areas vital to tourism and recreation. By producing this report on the ecological condition of estuaries in the Gulf of Mexico, we have taken one step in assessing the health of this environmental resource. We have produced an environmental “report card” to be used as a guide in the evaluation of management decisions and research directions. This report is organized in three parts: (1) an introduction that gives background information on the Gulf of Mexico, estuarine ecology, and the factors that impact estuaries in the gulf, (2) the main section on priority ecological indicators used to measure the condition of estuaries in the gulf and (3) an ecological report card that summarizes the data on ecological indicators and provides a rating of the condition of estuaries in each gulf state and for gulf estuaries overall. Many of the ratings were based on the percent area of estuaries in each state exhibiting degraded or adverse levels of an indicator. Eutrophication, a condition of high nutrients often resulting in low oxygen levels and other adverse effects, is an important water quality concern for estuaries along the gulf coast. The National Oceanic and Atmospheric Administration (NOAA) has compared the Gulf of Mexico to other coastal regions like the middle Atlantic and has ranked the Gulf of Mexico as having the highest number of point sources of nutrients and the highest percentage of land use devoted to agriculture. We evaluated monitoring data for nitrogen, chlorophyll, and dissolved oxygen as indicators of eutrophication. Although most of the estuaries exhibited high nitrogen or chlorophyll or low dissolved oxygen concentrations at least once during a survey, many times these conditions were observed in small rivers or bayous rather than in the entire estuary. Often, the percent area affected was low. The gulf estuaries had moderate conditions overall for nutrients and dissolved oxygen. Definite nutrient problems were observed in >25% of the estuarine area in Louisiana and Texas and definite dissolved oxygen problems were observed in Alabama. Contaminants in estuarine sediments provide evidence of the accumulation of chemicals from anthropogenic sources. We compared the concentrations of sediment contaminants to established guideline values to determine the proportion of estuarine area that could have potential adverse effects on living organisms. Although detectable levels of contaminants were measured in almost every estuary in the Gulf of Mexico, <25% of the estuarine area in all states had contaminant concentrations that exceeded these guidelines. Wetlands are integral parts of estuarine systems. Declining acreage means habitat loss that may be the result of commercial and residential development, hydrologic alterations, or dredge and fill operations. The Gulf of Mexico region contains more than 50% of the coastal wetland acreage in the U.S. and yet it also has the highest rate of coastal wetland loss. Nine of the top ten estuarine drainage areas ranked by total wetland area are in the Gulf of Mexico region. The most current estimates of total wetland loss over the past 200 years range from 41% to 54% for the gulf states. Although coastal wetlands continue to be altered or destroyed, some estimates indicate that the rate of loss has slowed. All gulf states were rated as having severe problems with wetland loss. The condition of benthic (bottom-dwelling) invertebrates, fish and shellfish, birds, and threatened and endangered species was used to evaluate the health of estuarine fauna. Degraded benthic communities inhabited <25% of the estuarine area in all gulf states except for Texas. Commercial fish and shellfish landings may be used as an indicator of population stability while fish biomarkers are used to measure the health of individuals in the population. Commercial landings of the top four fisheries (shrimp, menhaden, blue crab, and oyster) are stable in the gulf states while fish biomarkers indicate fair to poor fish health in Alabama and Texas and good fish health elsewhere. Coastal and marine bird populations appear to be in good condition throughout the gulf. Four threatened or endangered species inhabit coastal areas in the Gulf of Mexico: brown pelican, Gulf sturgeon, manatee, and Kemp’s ridley sea turtle. In general, populations of these species are in good to fair condition in the gulf states. Public health indicators include shellfish bed closures and chemicals found in edible fish tissue. Harvest of shellfish (primarily oyster in the Gulf of Mexico) is restricted or prohibited when concentrations of bacteria or other pathogens reach levels that could impair human health. The gulf states contain the most acreage of shellfish-growing waters in the U.S. but also have the most acreage restricted for harvest. All gulf states except Mississippi have >25% of their shellfish-growing waters restricted for harvest, mostly due to pollution from wastewater treatment plants or other upstream sources. Advisories may be issued that limit consumption when the concentrations of chemicals in fish tissue exceed levels known to be harmful to humans. Although seafood consumption advisories have been issued in all gulf states, the percent of the fish population with high concentrations of contaminants is relatively low in the gulf overall.

Alabama, Florida, Louisiana, Mississippi, Texas↗

USGS2022

Undeveloped and developed phases in the centennial evolution of a barrier-marsh-lagoon system: The case of Long Beach Island, New Jersey

Barrier islands and their associated backbarrier environments protect mainland population centers and infrastructure from storm impacts, support biodiversity, and provide long-term carbon storage, among other ecosystem services. Despite their socio-economic and ecological importance, the response of coupled barrier-marsh-lagoon environments to sea-level rise is poorly understood. Undeveloped barrier-marsh-lagoon systems typically respond to sea-level rise through the process of landward migration, driven by storm overwash and landward mainland marsh expansion. Such response, however, can be affected by human development and engineering activities such as lagoon dredging and shoreline stabilization. To better understand the difference in the response between developed and undeveloped barrier-marsh-lagoon environments to sea-level rise, we perform a local morphologic analysis that describes the evolution of Long Beach Island (LBI), New Jersey, over the last 182 years. We find that between 1840 and 1934 the LBI system experienced landward migration of all five boundaries, including 171 meters of shoreline retreat. Between the 1920s and 1950s, however, there was a significant shift in system behavior that coincided with the onset of groin construction, which was enhanced by beach nourishment and lagoon dredging practices. From 1934 to 2022 the LBI system experienced ~22 meters of shoreline progradation and a rapid decline in marsh platform extent. Additionally, we extend a morphodynamic model to describe the evolution of the system in terms of five geomorphic boundaries: the ocean shoreline and backbarrier-marsh interface, the seaward and landward lagoon-marsh boundaries, and the landward limit of the inland marsh. We couple this numerical modeling effort with the map analysis during the undeveloped phase of LBI evolution, between 1840 and 1934. Despite its simplicity, the modeling framework can describe the average cross-shore evolution of the barrier-marsh-lagoon system during this period without accounting for human landscape modifications, supporting the premise that natural processes were the key drivers of morphological change. Overall, these results suggest that anthropogenic effects have played a major role in the evolution of LBI over the past century by altering overwash fluxes and marsh-lagoon geometry; this is likely the case for other barrier-marsh-lagoon environments around the world.

New Jersey↗

USGS2022

Characterizing mauka-to-makai connections for aquatic ecosystem conservation on Maui, Hawaiʻi

Mauka-to-makai (mountain to sea in the Hawaiian language) hydrologic connectivity – commonly referred to as ridge-to-reef – directly affects biogeochemical processes and socioecological functions across terrestrial, freshwater, and marine systems. The supply of freshwater to estuarine and nearshore environments in a ridge-to-reef system supports the food, water, and habitats utilized by marine fauna . In addition, the ecosystem services derived from this land-to-sea connectivity support social and cultural practices (hereafter referred to as socio-cultural) including fishing, aquaculture, wetland agriculture, religious ceremonies, and recreational activities. To effectively guide island resource management, a better understanding of the linkages from ridge-to-reef across natural and social usages is critical, particularly in the context of climate change, with anticipated increasing temperature and shifting precipitation patterns. The objective of this study was to identify spatial linkages that promote multiple and diverse uses, following the ridge-to-reef concept, at an island-wide scale to identify regions of high conservation importance for aquatic resources. We selected the Island of Maui as a study representative of many Pacific islands. Diverse datasets, including agricultural lands within watersheds, wetland locations, presence of stream species, indicators of freshwater input from streams, coral cover, nearshore fish biomass, socio-cultural data such as fishpond locations, wetland taro cultivation, beach recreation use, and lastly the dynamically downscaled Coupled Model Intercomparison Project Phase (CMIP5) future climate projections scenarios (Representative Concentration Pathway (RCP) 4.5 & 8.5) were used to examine the spatial linkages through hydrological connectivity from land to the sea. Zonation spatial planning software was used to prioritize areas of high management and conservation value and to help inform aquatic resources management. The resulting prioritized areas included many minimally disturbed watersheds in east Maui and western nearshore and coastal zones that are adjacent to diverse coral reefs. These results are driven by the importance of fish biomass and coral reef distribution as well as traditional wetland taro cultivation and coastal access points for recreation. These results underline the importance of examining ridge-to-reef systems for aquatic resource management and including important social and cultural values in resource management upon planning adaptation strategies for climate change. Improving our understanding of diverse natural and socio-cultural influences on habitat conditions and their values in these areas provides an opportunity to strategically plan future management and conservation actions.

Hawaii↗

USGS2020

Estimating population-specific predation effects on Chinook salmon via data integration

Recent success in the conservation of many marine mammals has resulted in new management challenges due to increasing conflict with fisheries. Increasing predation by pinnipeds on threatened salmon is of particular concern. Seemingly, pinniped conservation is now in conflict with the recovery of threatened salmon, creating a dilemma for managers. We use the Lower Columbia River as a case study for examining the relationship between seasonal California sea lion Zalophus californianus abundance and survival of threatened salmon. To quantify mortality associated with increasing sea lion abundance, we examined the effect of seasonal sea lion abundance on adult Chinook salmon Oncorhynchus tshawytscha survival during migrations through the Lower Columbia River. We integrated data on survival with data on population-specific migration timing, allowing quantification of the relationship between sea lion abundance and survival in 18 populations of spring–summer Chinook salmon listed as Threatened or Endangered under the U.S. Endangered Species Act. Of the 18 populations examined, earlier migrating populations experienced lower survival in association with increased exposure to higher sea lion abundance. We estimated that in years with high sea lion abundance, the nine earliest-migrating populations experienced an additional 21.1% (95% CI = 16.3–26.1) mortality compared to years with baseline sea lion abundance, while the nine latest migrating populations experienced an additional 10.1% (7.5–13.0). Synthesis and applications . Integrating datasets on seasonal survival and migration timing made it possible for us to estimate population-specific mortality associated with increased sea lion abundance in the Lower Columbia River. This information could not be produced from any one dataset, highlighting the utility of data integration approaches. The mortality experienced by early migrating Chinook salmon suggests the potential for demographic and evolutionary consequences. Management actions such as hazing, relocating, or removing individuals that are frequent predators on salmon have been proposed. Identifying the management actions that will allow for socially and legally acceptable trade-offs between multiple conservation and other social values will be facilitated by development of explicit multi-species management frameworks. Continued monitoring will help to reduce the substantial uncertainty about the effect of pinnipeds on salmon and the predicted outcomes of alternative management actions.

Oregon, Washington↗

USGS2023

Dissolved organic carbon dynamics and fluxes in Mississippi-Atchafalaya deltaic system impacted by an extreme flood event and hurricanes: A multi-satellite approach using Sentinel-2/3 and Landsat-8/9 data

Transport of riverine and wetland-derived dissolved organic carbon (DOC) spanning tidal wetlands, estuaries, and continental shelf waters functionally connects terrestrial and aquatic carbon reservoirs, yet the magnitude and ecological significance of this variable and its spatiotemporal linkage remains uncertain for coastal deltaic regions, such as Mississippi River Delta Plain, which includes Mississippi (MR) and Atchafalaya (AR) rivers and estuaries with vast expanses of wetlands and coastal forests. We examined DOC dynamics and fluxes in this large river-dominated wetland-estuarine system for the period between 2019 and 2021 that included an extreme river flood event in 2019, two major hurricanes (Barry in 2019 and Ida in 2021), and cold front passage using an improved adaptive quasi-analytical algorithm (QAA-AD) applied to multi-satellite sensors (Sentinel 3A/B OLCI, Landsat-8/OLI and Sentinel-2A/B MSI) with varying spectral and spatial (10/30/300 m) resolutions. The DOC estimates from multi-satellite sensors in combination with water fluxes were used to assess DOC fluxes from two large rivers (MR and AR) and small channels across the delta plain. Overall, this system delivered a total of 6.7 Tg C yr -1 (1 Tg = 10 12 g) into the estuarine zone and the northern Gulf of Mexico (nGoM) during 2019. High DOC fluxes from the AR (1.3 Tg C yr -1 ) and MR (4.5 Tg C yr -1 ) were associated with the extreme flood event in 2019. Hurricanes that occurred in the study period also contributed to the wetland and estuarine DOC fluxes into continental shelf waters; for example, the passage of Hurricane Barry in July 2019, delivered over a 3-day period ~1.33 ×10 9 g DOC from Barataria Basin into the nGoM. Sentinel 2-MSI land and water classification revealed that Hurricane Ida eroded a total of 1.34×10 8 m 2 of marshes in middle Barataria Basin, converting those habitats into open water with 3.0 m inundation depth and high DOC concentrations (16.4 mg L -1 ), a potentially large DOC source to the coastal waters. Overall, storms and flood events are major sources of DOC flux that facilitate transport of upstream carbon as well as transformation of carbon in the wetlands, through the conversion of vegetated wetland to open water.

Louisiana↗

USGS2016

Environmental controls on spatial patterns in the long-term persistence of giant kelp in central California

As marine management is moving towards the practice of protecting static areas, it is 44 important to make sure protected areas capture and protect persistent populations. Rocky reefs in 45 many temperate areas worldwide serve as habitat for canopy forming macroalgae and these 46 structure forming species of kelps (order Laminariales) often serve as important habitat for a great 47 diversity of species. Macrocystis pyrifera is the most common canopy forming kelp species found 48 along the coast of California but the distribution and abundance of M. pyrifera varies in space and 49 time. The purpose of this study is to determine what environmental parameters are correlated with 50 the spatial and temporal persistence of M. pyrifera along the central coast of California and how 51 well those environmental parameters can be used to predict areas where M. pyrifera is more likely 52 to persist. Nine environmental variables considered in this study included depth of the seafloor, 53 structure of the rocky reef, proportion of rocky reef, size of kelp patch, biomass of kelp within a 54 patch, distance from the edge of a kelp patch, sea surface temperature, wave orbital velocities, and 55 population connectivity of individual kelp patches. Using a generalized linear mixed effects model 56 (GLMM), the persistence of M. pyrifera was significantly associated with seven of the nine 57 variables considered: depth, complexity of the rocky reef, proportion of rock, patch biomass, 58 distance from the edge of a patch, population connectivity, and wave-orbital velocities. These 59 seven environmental variables were then used to predict the persistence of kelp across the central 60 coast and these predictions were compared to a reserved dataset of M. pyrifera persistence, which 61 was not used in the creation of the GLMM. The environmental variables were shown to accurately 62 predict the persistence of M. pyrifera within the central coast of California (r = 0.71, P<0.001). 63 Because persistence of giant kelp is important to the community structure of kelp forests, 64 understanding those factors that support persistent populations of M. pyrifera will enable more 65 effective management of these ecosystems.

California↗

USGS2026

Global framework for communication of biological invasion risks

Biological invasions, driven by the spread of non-native species, have become a critical global issue because of their far-reaching ecological and socioeconomic impacts. Effective communication of the risks of biological invasions is essential for implementing robust policy and legislation and gaining public support for conservation efforts. However, current policies often suffer from fragmentation and ineffectiveness, largely due to inadequate risk communication and complex multilevel governance. To address this challenge, we develop a global framework designed to enhance clearer communication about biological invasion risks. The framework contextualizes key terms across three domains in invasion science: species invasiveness, risk analysis, and decision support tools. Using both diffusion-of-English and ecology-of-language paradigms, and following a three-step process involving preliminary consensus, AI querying, and ground-truthing with final consensus, we validate the framework in 70 non-English languages which, together with English, have official status in at least one country and collectively cover all 195 countries worldwide. Our findings reveal that while terminology for risk analysis is well established, terminology for species invasiveness and, especially, for decision support tools remains underdeveloped in many languages, hindering effective communication and policy implementation. Our framework underscores the importance of cultural and political neutrality. By promoting clearer risk communication among scientists, policymakers, and the public globally, we aim to reduce policy fragmentation and foster enhanced collaboration in risk mitigation. We recommend expanding multilingual decision support tools to include the full risk analysis process: risk identification, risk assessment, and risk management. This will support intergovernmental mitigation efforts and promote a unified global response to biological invasions.

Management of Biological Invasions↗