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At least 991 records · Page 55Linked to original sources
USGS2012

Airborne electromagnetic imaging of discontinuous permafrost

The evolution of permafrost in cold regions is inextricably connected to hydrogeologic processes, climate, and ecosystems. Permafrost thawing has been linked to changes in wetland and lake areas, alteration of the groundwater contribution to streamflow, carbon release, and increased fire frequency. But detailed knowledge about the dynamic state of permafrost in relation to surface and groundwater systems remains an enigma. Here, we present the results of a pioneering ∼1,800 line-kilometer airborne electromagnetic survey that shows sediments deposited over the past ∼4 million years and the configuration of permafrost to depths of ∼100 meters in the Yukon Flats area near Fort Yukon, Alaska. The Yukon Flats is near the boundary between continuous permafrost to the north and discontinuous permafrost to the south, making it an important location for examining permafrost dynamics. Our results not only provide a detailed snapshot of the present-day configuration of permafrost, but they also expose previously unseen details about potential surface – groundwater connections and the thermal legacy of surface water features that has been recorded in the permafrost over the past ∼1,000 years. This work will be a critical baseline for future permafrost studies aimed at exploring the connections between hydrogeologic, climatic, and ecological processes, and has significant implications for the stewardship of Arctic environments.

Alaska↗
USGS2009

Selected achievements, science directions, and new opportunities for the WEBB small watershed research program

Over nearly two decades, the Water, Energy, and Biogeochemical Budgets (WEBB) small watershed research program of the U.S. Geological Survey (USGS) has documented how water and solute fluxes, nutrient, carbon, and mercury dynamics, and weathering and sediment transport respond to natural and humancaused drivers, including climate, climate change, and atmospheric deposition. Together with a continued and increasing focus on the effects of climate change, more investigations are needed that examine ecological effects (e.g., evapotranspiration, nutrient uptake) and responses (e.g., species abundances, biodiversity) that are coupled with the physical and chemical processes historically observed in the WEBB program. Greater use of remote sensing, geographic modeling, and habitat/watershed modeling tools is needed, as is closer integration with the USGS-led National Phenology Network. Better understanding of process and system response times is needed. The analysis and observation of land-use and climate change effects over time should be improved by pooling data obtained by the WEBB program during the last two decades with data obtained earlier and (or) concurrently from other research and monitoring studies conducted at or near the five WEBB watershed sites. These data can be supplemented with historical and paleo-environmental information, such as could be obtained from tree rings and lake cores. Because of the relatively pristine nature and small size of its watersheds, the WEBB program could provide process understanding and basic data to better characterize and quantify ecosystem services and to develop and apply indicators of ecosystem health. In collaboration with other Federal and State watershed research programs, the WEBB program has an opportunity to contribute to tracking the short-term dynamics and long-term evolution of ecosystem services and health indicators at a multiplicity of scales across the landscape.

Conference Paper↗
USGS2017

Field-trip guide to mafic volcanism of the Cascade Range in Central Oregon—A volcanic, tectonic, hydrologic, and geomorphic journey

The Cascade Range in central Oregon has been shaped by tectonics, volcanism, and hydrology, as well as geomorphic forces that include glaciations. As a result of the rich interplay between these forces, mafic volcanism here can have surprising manifestations, which include relatively large tephra footprints and extensive lava flows, as well as water shortages, transportation and agricultural disruption, and forest fires. Although the focus of this multidisciplinary field trip will be on mafic volcanism, we will also look at the hydrology, geomorphology, and ecology of the area, and we will examine how these elements both influence and are influenced by mafic volcanism. We will see mafic volcanic rocks at the Sand Mountain volcanic field and in the Santiam Pass area, at McKenzie Pass, and in the southern Bend region. In addition, this field trip will occur during a total solar eclipse, the first one visible in the United States in more than 25 years (and the first seen in the conterminous United States in more than 37 years). The Cascade Range is the result of subduction of the Juan de Fuca plate underneath the North American plate. This north-south-trending volcanic mountain range is immediately downwind of the Pacific Ocean, a huge source of moisture. As moisture is blown eastward from the Pacific on prevailing winds, it encounters the Cascade Range in Oregon, and the resulting orographic lift and corresponding rain shadow is one of the strongest precipitation gradients in the conterminous United States. We will see how the products of the volcanoes in the central Oregon Cascades have had a profound influence on groundwater flow and, thus, on the distribution of Pacific moisture. We will also see the influence that mafic volcanism has had on landscape evolution, vegetation development, and general hydrology.

Oregon↗
USGS2009

Otters, Marine

The otters (Mustelidae; Lutrinae) provide an exceptional perspective into the evolution of marine living by mammals. Most extant marine mammals (e.g. the cetaceans, pinnipeds, and sirenians) have been so highly modified by long periods of selection for life in the sea that they bear little resemblance to their terrestrial ancestors. Marine otters, in contrast, are more recent expatriates from freshwater habitats and some species still live in both environments. Contrasts among species within the otters, and among the otters, terrestrial mammals, and the more highly adapted pinnipeds and cetaceans provide powerful insights into mammalian adaptations to life in the sea (Estes, 1989). Among the marine mammals, sea otters ( Enhydra lutris , Fig. 1) provide the clearest understanding of consumer-induced effects on ecosystem function. This is due in part to opportunities provided by history and in part to the relative ease with which shallow coastal systems where sea otters live can be observed and studied. Although more difficult to study than sea otters, other otter species reveal the connectivity among the marine, freshwater, and terrestrial systems. These three qualities of the otters – their comparative biology, their role as predators, and their role as agents of ecosystem connectivity – are what make them interesting to marine mammalogy. The following account provides a broad overview of the comparative biology and ecology of the otters, with particular emphasis on those species or populations that live in the sea. Sea otters are features prominently, in part because they live exclusively in the sea whereas other otters have obligate associations with freshwater and terrestrial environments (Kenyon, 1969; Riedman and Estes, 1990).

Book chapter↗
USGS2005

Crossing the ultimate ecological barrier: Evidence for an 11,000-km-long non-stop flight from Alaska to New Zealand and Eastern Australia by Bar-tailed Godwits

Populations of the Bar-tailed Godwit ( Limosa lapponica ; Scolopacidae) embark on some of the longest migrations known among birds. The baueri race breeds in western Alaska and spends the nonbreeding season a hemisphere away in New Zealand and eastern Australia; the menzbieri race breeds in Siberia and migrates to western and northern Australia. Although the Siberian birds are known to follow the coast of Asia during both migrations, the southern pathway followed by the Alaska breeders has remained unknown. Two questions have particular ecological importance: (1) do Alaska godwits migrate directly across the Pacific, a distance of 11 000 km? and (2) are they capable of doing this in a single flight without stopping to rest or refuel? We explored six lines of evidence to answer these questions. The distribution of resightings of marked birds of the baueri and menzbieri races was significantly different between northward and southward flights with virtually no marked baueri resighted along the Asian mainland during southward migration. The timing of southward migration of the two races further indicates the absence of a coastal Asia route by baueri with peak passage of godwits in general occurring there a month prior to the departure of most birds from Alaska. The use of a direct route across the Pacific is also supported by significantly more records of godwits reported from within a direct migration corridor than elsewhere in Oceania, and during the September to November period than at other times of the year. The annual but rare occurrence of Hudsonian Godwits ( L. haemastica ) in New Zealand and the absence of their records along the Asian mainland also support a direct flight and are best explained by Hudsonian Godwits accompanying Bar-tailed Godwits from known communal staging areas in Alaska. Flight simulation models, extreme fat loads, and the apparent evolution of a wind-selected migration from Alaska further support a direct, nonstop flight.

The Condor↗
USGS1997

Convergent seed germination in South African fynbos and Californian chaparral

California chaparral and South African fynbos are fire-prone communities dominated by species exhibiting remarkable similarities in germination response. In both regions there are a substantial number of species with germination stimulated chemically by charred wood and smoke. This type of germination behaviour has arisen independently in distantly related families and is interpreted as convergent evolution. Heat-shock is also an important germination trigger that is widespread, although in both regions it is most common in the same families. Phylogeney may play an important role in the presence of this postfire germination cue in both regions, but a much more rigorous analysis is required to show that this trait represents a single unique event in each lineage. In both regions, germination response is not randomly distributed across growth forms and there are marked regional similiarities in the type of germination behaviour associated with certain growth forms. Geophytes largely lack refractory seeds, which require fire-type cues for germination, but the presence of fire-stimulated flowering of bulbs and corms may time recruitment to subsequent postfire years. Annuals that cue germination to postfire conditions are predominantly triggered by chemicals from smoke and/or charred wood.

Plant Ecology↗
USGS2021

Brood provisioning rates and fledgling behavior of Cordilleran Flycatchers in southwestern Colorado

The behavior of young songbirds after fledging is one of the least understood phases of the breeding cycle, although parental provisioning rates and movement of fledglings are key to understanding life history evolution. We studied Cordilleran Flycatchers ( Empidonax occidentalis ) at two sites in southwestern Colorado, USA, from 2012 to 2017. We banded and sexed breeding adults to determine the relative contributions of males and females to nestling and fledgling care, and attached radio-transmitters to nestlings to facilitate observations of brood behavior after fledging. Females made 60% and 78% of total observed feedings of nestlings and fledglings, respectively. Parental provisioning rates increased with nestling age, and per-nestling provisioning rates increased with brood size. Parental provisioning rates declined just before fledging, then increased just after fledging. Fledging times of individuals in broods were asynchronous and concentrated during the late afternoon and early evening. Males stopped caring for fledglings before females even though this species is single-brooded, with some late-season broods being abandoned by males. Broods spent the first three weeks after fledging within 400 m of nests, after which they began to disperse. Most aspects of the breeding biology of Cordilleran Flycatchers in our study, including the duration of nestling and fledging periods, female-dominated provisioning, and movement patterns of fledglings, were similar to those of other Empidonax species. However, the times when young fledged were not concentrated in the morning as reported in most other songbirds, and this result warrants additional study of the timing of fledging in ecologically and taxonomically similar species. The increased per-nestling provisioning rate with increasing brood size was unexpected, and additional study is needed to determine if this increase results from a trade-off between adult annual survival and productivity favoring increased provisioning of young in larger broods, or from the existence of high-quality individuals where larger clutches and higher provisioning rates are linked.

Colorado↗
USGS2011

The human dimension of fire regimes on Earth

Humans and their ancestors are unique in being a fire‐making species, but ‘natural’ (i.e. independent of humans) fires have an ancient, geological history on Earth. Natural fires have influenced biological evolution and global biogeochemical cycles, making fire integral to the functioning of some biomes. Globally, debate rages about the impact on ecosystems of prehistoric human‐set fires, with views ranging from catastrophic to negligible. Understanding of the diversity of human fire regimes on Earth in the past, present and future remains rudimentary. It remains uncertain how humans have caused a departure from ‘natural’ background levels that vary with climate change. Available evidence shows that modern humans can increase or decrease background levels of natural fire activity by clearing forests, promoting grazing, dispersing plants, altering ignition patterns and actively suppressing fires, thereby causing substantial ecosystem changes and loss of biodiversity. Some of these contemporary fire regimes cause substantial economic disruptions owing to the destruction of infrastructure, degradation of ecosystem services, loss of life, and smoke‐related health effects. These episodic disasters help frame negative public attitudes towards landscape fires, despite the need for burning to sustain some ecosystems. Greenhouse gas‐induced warming and changes in the hydrological cycle may increase the occurrence of large, severe fires, with potentially significant feedbacks to the Earth system. Improved understanding of human fire regimes demands: (1) better data on past and current human influences on fire regimes to enable global comparative analyses, (2) a greater understanding of different cultural traditions of landscape burning and their positive and negative social, economic and ecological effects, and (3) more realistic representations of anthropogenic fire in global vegetation and climate change models. We provide an historical framework to promote understanding of the development and diversification of fire regimes, covering the pre‐human period, human domestication of fire, and the subsequent transition from subsistence agriculture to industrial economies. All of these phases still occur on Earth, providing opportunities for comparative research.

Journal of Biogeography↗
USGS2020

Crossroads of highly pathogenic H5N1: overlap between wild and domestic birds in the Black Sea-Mediterranean impacts global transmission

Understanding transmission dynamics that link wild and domestic animals is a key element of predicting the emergence of infectious disease, an event that has highest likelihood of occurring wherever human livelihoods depend on agriculture and animal trade. Contact between poultry and wild birds is a key driver of the emergence of highly pathogenic avian influenza (HPAI), a process that allows for host-switching and accelerated reassortment, diversification and spread of virus between otherwise unconnected regions. This study addresses questions relevant to the spillover of HPAI at a transmission hotspot: what is the nature of the wild bird-poultry interface in Egypt and adjacent Black Sea-Mediterranean countries and how has this contributed to outbreaks occurring worldwide? Using a spatio-temporal model of infection risk informed by satellite tracking of waterfowl and viral phylogenetics, this study identified ecological conditions that contribute to spillover in this understudied region. Results indicated that multiple ducks (Northern Shoveler and Northern Pintail) hosted segments that shared ancestry with HPAI H5 from both clade 2.2.1 and clade 2.3.4 supporting the role of Anseriformes in linking viral populations in East Asia and Africa over large-distances. Quantifying the interface between wild ducks and H5N1-infected poultry revealed an increasing interface in late winter peaking in early spring when ducks expanded their range before migration, with key differences in the timing of poultry contact risk between local and long-distance migrants.

Virus Evolution↗
USGS2007

Variation in northern bobwhite demography along two temporal scales

Quantification and understanding of demographic variation across intra- and inter-annual temporal scales can benefit from the development of theoretical models of evolution and applied conservation of species. We used long-term survey data for northern bobwhites (Colinus virginianus) collected at the northern and southern extent of its geographic range to develop matrix population models which would allow investigation of intra- and inter-annual patterns in bobwhite population dynamics. We first evaluated intra-annual patterns in the importance of a seasonal demographic rate to asymptotic population growth rate with prospective perturbation analysis (elasticity analysis). We then conducted retrospective analysis (life table response experiments) of inter-annual patterns in the contribution of observed changes in demography to the observed change in population growth rate. Survival in the earliest age class during the nonbreeding season had the greatest potential influence in both the northern and southern populations. Examination of inter-annual variation in demography indicated that variation in nonbreeding season survival in the earliest age class contributed the most to observed changes in population growth rate in the northern population. In contrast, changes in fertility in the earliest age class in the southern population had the greatest influence on changes in population growth rate. Prospective elasticity analyses highlight the similarities in bobwhite demography throughout different parts of its geographic range, while retrospective life table response experiments revealed important patterns in the temporal differences of bobwhite life history at the northern and southern extent of its geographic range. ?? 2007 The Society of Population Ecology and Springer.

Population Ecology↗
USGS2015

Trade-offs in osmoregulation and parallel shifts in molecular function follow ecological transitions to freshwater in the Alewife

Adaptation to freshwater may be expected to reduce performance in seawater because these environments represent opposing selective regimes. We tested for such a trade-off in populations of the Alewife ( Alosa pseudoharengus ). Alewives are ancestrally anadromous, and multiple populations have been independently restricted to freshwater (landlocked). We conducted salinity challenge experiments, whereby juvenile Alewives from one anadromous and multiple landlocked populations were exposed to freshwater and seawater on acute and acclimation timescales. In response to acute salinity challenge trials, independently derived landlocked populations varied in the degree to which seawater tolerance has been lost. In laboratory-acclimation experiments, landlocked Alewives exhibited improved freshwater tolerance, which was correlated with reductions in seawater tolerance and hypo-osmotic balance, suggesting that trade-offs in osmoregulation may be associated with local adaptation to freshwater. We detected differentiation between life-history forms in the expression of an ion-uptake gene ( NHE3 ), and in gill Na + /K + -ATPase activity. Trade-offs in osmoregulation, therefore, may be mediated by differentiation in ion-uptake and salt-secreting pathways.

Evolution↗
USGS2011

Environmental conditions constrain the distribution and diversity of archaeal merA in Yellowstone National Park, Wyoming, U.S.A.

The distribution and phylogeny of extant protein-encoding genes recovered from geochemically diverse environments can provide insight into the physical and chemical parameters that led to the origin and which constrained the evolution of a functional process. Mercuric reductase (MerA) plays an integral role in mercury (Hg) biogeochemistry by catalyzing the transformation of Hg(II) to Hg(0). Putative merA sequences were amplified from DNA extracts of microbial communities associated with mats and sulfur precipitates from physicochemically diverse Hg-containing springs in Yellowstone National Park, Wyoming, using four PCR primer sets that were designed to capture the known diversity of merA. The recovery of novel and deeply rooted MerA lineages from these habitats supports previous evidence that indicates merA originated in a thermophilic environment. Generalized linear models indicate that the distribution of putative archaeal merA lineages was constrained by a combination of pH, dissolved organic carbon, dissolved total mercury and sulfide. The models failed to identify statistically well supported trends for the distribution of putative bacterial merA lineages as a function of these or other measured environmental variables, suggesting that these lineages were either influenced by environmental parameters not considered in the present study, or the bacterial primer sets were designed to target too broad of a class of genes which may have responded differently to environmental stimuli. The widespread occurrence of merA in the geothermal environments implies a prominent role for Hg detoxification in these environments. Moreover, the differences in the distribution of the merA genes amplified with the four merA primer sets suggests that the organisms putatively engaged in this activity have evolved to occupy different ecological niches within the geothermal gradient.

Yellowstone National Park↗
USGS2012

Adaptive breeding habitat selection: Is it for the birds?

The question of why animals choose particular habitats has important implications for understanding behavioral evolution and distribution of organisms in the wild and for delineating between habitats of different quality for conservation and management. Habitats chosen by animals can influence fitness outcomes via the costs (e.g., predation risk) and benefits (e.g., food availability) of habitat use. Habitat preferences should therefore be under selection to favor those that confer fitness advantages (Clark and Shutler 1999). Indeed, prevailing theory suggests that the habitat preferences of animals should be adaptive, such that fitness is higher in preferred habitats (Hildén 1965, Southwood 1977, Martin 1998). However, studies have often identified apparent mismatches between observed habitat preferences and fitness outcomes across a wide variety of taxa (Valladares and Lawton 1991, Mayhew 1997, Kolbe and Janzen 2002, Arlt and Pärt 2007, Mägi et al. 2009). Certainly, one limitation of studies may be that assessment of “fitness” is typically constrained to fitness surrogates such as nest success rather than lifetime reproductive success or classic Fisherian fitness (Endler 1986). Nevertheless, important habitat choices such as nest sites influence the probability that temporarily sedentary, dependent young are discovered by enemies such as predators and parasites. We therefore expect, on average, to see congruence between evolved habitat preferences and relevant components of fitness (e.g., nest success). Here, we (1) review the prevalence of apparent mismatches between avian breeding-habitat preferences and fitness outcomes using nest-site selection as a focus; (2) describe several potential mechanisms for such mismatches, including anthropogenic, methodological, and ecological–evolutionary; and (3) suggest a framework for understanding the contexts in which habitat preferences represent adaptive decisions, with a primary focus on ecological information theory. We largely focus on habitat selection as a behavioral process at the scale of individuals (e.g., Robertson and Hutto 2006), rather than at the scale of population-level patterns (Fretwell and Lucas 1970, Morris 2003, Johnson 2007). However, these two scales cannot be wholly divorced from one another, as we will discuss.

The Auk↗
USGS2026

Abrupt onset and persistent downstream effects of acid rock drainage on rivers across northwest Arctic Alaska

Arctic streams and rivers are increasingly vulnerable to degradation from permafrost thaw that releases toxic elements via natural acid rock drainage. However, the spatial and temporal evolution of acid rock drainage on river chemistry across diverse mineral settings remain poorly constrained. Here, water chemistry in six watersheds across Alaska's Brooks Range (2022–2024) quantified the effects of acid rock drainage on river chemistry. Point-source acid rock drainage inputs (seeps and impaired tributaries) exhibited lower pH (median; pH: 3.2 and 6.9, respectively), higher sulfate (SO 4 2− : 3,025 and 390 mg L −1 , respectively), and elevated major and trace element concentrations (sum of 23 metals: 451 and 9.2 mg L −1 , respectively), compared to upstream unimpaired mainstem rivers (pH = 8.3, SO 4 2− = 68 mg L −1 ; metals = 0.1 mg L −1 ). Across watersheds, these inputs increased mainstem concentrations of major and trace elements (e.g., Fe, Al, Mn, Zn, Ni, Cd, and rare earth elements) and SO 4 2− ; however, mainstem river pH remained stable due to sufficient buffering. Within the Salmon River, concentrations of filter-passing and particulate fractions of constituents (SO 4 2− , Fe, Zn, Ni, and Cd) were elevated ≤70-fold at >100 km downstream of acidic inputs, documenting long-range transport. Temporal analyses of SO 4 2− and Zn concentration (2015–2024) revealed abrupt increases (≤263%) in two watersheds between 2019 and 2020, aligning with antecedent record warm and snowy winter conditions. Collectively, our results document the abrupt onset of acid rock drainage across Arctic rivers with potential for long-range downstream transport and implications for biogeochemical cycles and ecological and human health.

Alaska↗
USGS1996

Phylogenetic relationships within the Alcidae (Charadriiformes: Aves) inferred from total molecular evidence

The Alcidae is a unique assemblage of Northern Hemisphere seabirds that forage by "flying" underwater. Despite obvious affinities among the species, their evolutionary relationships are unclear. We analyzed nucleotide sequences of 1,045 base pairs of the mitochondrial cytochrome b gene and allelic profiles for 37 allozyme loci in all 22 extant species. Trees were constructed on independent and combined data sets using maximum parsimony and distance methods that correct for superimposed changes. Alternative methods of analysis produced only minor differences in relationships that were supported strongly by bootstrapping or standard error tests. Combining sequence and allozyme data into a single analysis provided the greatest number of relationships receiving strong support. Addition of published morphological and ecological data did not improve support for any additional relationship. All analyses grouped species into six distinct lineages: (1) the dovekie ( Alle alle ) and auks, (2) guillemots, (3) brachyramphine murrelets, (4) synthliboramphine murrelets, (5) true auklets, and (6) the rhinoceros auklet ( Cerorhinca monocerata ) and puffins. The two murres (genus Uria ) were sister taxa, and the black guillemot ( Cepphus grylle ) was basal to the other guillemots. The Asian subspecies of the marbled murrelet ( Brachyramphus marmoratus perdix ) was the most divergent brachyramphine murrelet, and two distinct lineages occurred within the synthliboramphine murrelets. Cassin's auklet ( Ptychoramphus aleuticus ) and the rhinoceros auklet were basal to the other auklets and puffins, respectively, and the Atlantic ( Fratercula arctica ) and horned ( Fratercula corniculata ) puffins were sister taxa. Several relationships among tribes, among the dovekie and auks, and among the auklets could not be resolved but resembled "star" phylogenies indicative of adaptive radiations at different depths within the trees.

Molecular Biology and Evolution↗
USGS2025

Host responses and viral traits interact to shape the impacts of climate warming on highly pathogenic avian influenza in migratory waterfowl

Emerging infectious diseases pose threats to wildlife populations, as exemplified by recent outbreaks of avian influenza viruses in wild birds. Climate change can affect infection dynamics in wildlife through direct effects on pathogens (e.g., environmental decay rates) and changes to host ecology, including shifting migration patterns. Here, we adapt an existing mechanistic model that couples migration and infection to study how traits of highly pathogenic avian influenza (HPAI) viruses contribute to HPAI outcomes in migratory waterfowl, then apply this model to explore potential impacts of climate change on HPAI dynamics. We find that the simulated impacts of HPAI on the host population under baseline climate conditions varied from no impact to 100% mortality, depending on viral traits. In most cases, traits related to transmission (i.e., contact rates, shedding rates) were more important for HPAI establishment probability, infection prevalence, and mortality than were other viral traits (e.g., environmental temperature sensitivity, cross-protective immunity). We then simulated the effects of climate change (i.e., altered temperature regimes) on HPAI dynamics both via viral environmental decay and via changes in bird migration phenology. In these simulations, we found that a 9-day advancement in spring migration timing increased the duration of HPAI outbreaks by increasing time birds spent at their breeding grounds, leading to higher mortality and fewer infections. In contrast, increased viral decay in warmer years had a smaller, but opposite impact. These patterns depended on the primary transmission mode of HPAI (i.e., direct vs. environmental) and its sensitivity to environmental temperatures. Together, these results suggest that climate change is likely to increase the impacts of HPAI on waterfowl populations if HPAI relies strongly on direct transmission and birds advance their spring migration. Further integrating host-viral co-evolution and other climatic changes (e.g., salinity, humidity) could provide more precise predictions of how HPAI dynamics could change in the future.

Alaska, California, Oregon↗
USGS2019

Pleistocene glacial cycles drove lineage diversification and fusion in the Yosemite toad (Anaxyrus canorus)

Species endemic to alpine environments can evolve via steep ecological selection gradients between lowland and upland environments. Additionally, many alpine environments have faced repeated glacial episodes over the past two million years, fracturing these endemics into isolated populations. In this “glacial pulse” model of alpine diversification, cycles of allopatry and ecologically divergent glacial refugia play a role in generating biodiversity, including novel admixed (“fused”) lineages. We tested for patterns of glacial pulse lineage diversification in the Yosemite toad ( Anaxyrus [ Bufo ] canorus ), an alpine endemic tied to glacially influenced meadow environments. Using double‐digest RADseq on populations densely sampled from a portion of the species range, we identified nine distinct lineages with divergence times ranging from 18 to 724 thousand years ago (ka), coinciding with multiple Sierra Nevada glacial events. Three lineages have admixed origins, and demographic models suggest these fused lineages have persisted throughout past glacial cycles. Directionality indices supported the hypothesis that some lineages recolonized Yosemite from east of the ice sheet, whereas other lineages remained in western refugia. Finally, refugial niche reconstructions suggest that low‐ and high‐elevation lineages have convergently adapted to similar climatic niches. Our results suggest glacial cycles and refugia may be important crucibles of adaptive diversity across deep evolutionary time.

California↗
USGS2001

Bottlenecks and multiple introductions: Population genetics of the vector of avian malaria in Hawaii

Avian malaria has had a profound impact on the demographics and behaviour of Hawaiian forest birds since its vector, Culex quinquefasciatus the southern house mosquito, was first introduced to Hawaii around 1830. In order to understand the dynamics of the disease in Hawaii and gain insights into the evolution of vector-mediated parasite–host interactions in general we studied the population genetics of Cx. quinquefasciatus in the Hawaiian Islands. We used both microsatellite and mitochondrial loci. Not surprisingly we found that mosquitoes in Midway, a small island in the Western group, are quite distinct from the populations in the main Hawaiian Islands. However, we also found that in general mosquito populations are relatively isolated even among the main islands, in particular between Hawaii (the Big Island) and the remaining Hawaiian Islands. We found evidence of bottlenecks among populations within the Big Island and an excess of alleles in Maui, the site of the original introduction. The mitochondrial diversity was typically low but higher than expected. The current distribution of mitochondrial haplotypes combined with the microsatellite information lead us to conclude that there have been several introductions and to speculate on some processes that may be responsible for the current population genetics of vectors of avian malaria in Hawaii.

Hawai'i↗