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At least 973 records · Page 54Linked to original sources
USGS2004

A general model for the analysis of mark-resight, mark-recapture, and band-recovery data under tag loss

Estimates of waterfowl demographic parameters often come from resighting studies where birds fit with individually identifiable neck collars are resighted at a distance. Concerns have been raised about the effects of collar loss on parameter estimates, and the reliability of extrapolating from collared individuals to the population. Models previously proposed to account for collar loss do not allow survival or harvest parameters to depend on neck collar presence or absence. Also, few models have incorporated recent advances in mark‐recapture theory that allow for multiple states or auxiliary encounters such as band recoveries. We propose a multistate model for tag loss in which the presence or absence of a collar is considered as a state variable. In this framework, demographic parameters are corrected for tag loss and questions related to collar effects on survival and recovery rates can be addressed. Encounters of individuals between closed sampling periods also can be incorporated in the analysis. We discuss data requirements for answering questions related to tag loss and sampling designs that lend themselves to this purpose. We illustrate the application of our model using a study of lesser snow geese ( Chen caerulescens caerulescens ).

Biometrics↗
USGS2008

Avian movements and wetland connectivity in landscape conservation

The current conservation crisis calls for research and management to be carried out on a long-term, multi-species basis at large spatial scales. Unfortunately, scientists, managers, and agencies often are stymied in their effort to conduct these large-scale studies because of a lack of appropriate technology, methodology, and funding. This issue is of particular concern in wetland conservation, for which the standard landscape approach may include consideration of a large tract of land but fail to incorporate the suite of wetland sites frequently used by highly mobile organisms such as waterbirds (e.g., shorebirds, wading birds, waterfowl). Typically, these species have population dynamics that require use of multiple wetlands, but this aspect of their life history has often been ignored in planning for their conservation. We outline theoretical, empirical, modeling, and planning problems associated with this issue and suggest solutions to some current obstacles. These solutions represent a tradeoff between typical in-depth single-species studies and more generic multi-species studies. They include studying within- and among-season movements of waterbirds on a spatial scale appropriate to both widely dispersing and more stationary species; multi-species censuses at multiple sites; further development and use of technology such as satellite transmitters and population-specific molecular markers; development of spatially explicit population models that consider within-season movements of waterbirds; and recognition from funding agencies that landscape-level issues cannot adequately be addressed without support for these types of studies.

Conservation Biology↗
USGS2012

Predicted effect of landscape position on wildlife habitat value of Conservation Reserve Enhancement Program wetlands in a tile-drained agricultural region

Justification for investment in restored or constructed wetland projects are often based on presumed net increases in ecosystem services. However, quantitative assessment of performance metrics is often difficult and restricted to a single objective. More comprehensive performance assessments could help inform decision-makers about trade-offs in services provided by alternative restoration program design attributes. The primary goal of the Iowa Conservation Reserve Enhancement Program is to establish wetlands that efficiently remove nitrates from tile-drained agricultural landscapes. A secondary objective is provision of wildlife habitat. We used existing wildlife habitat models to compare relative net change in potential wildlife habitat value for four alternative landscape positions of wetlands within the watershed. Predicted species richness and habitat value for birds, mammals, amphibians, and reptiles generally increased as the wetland position moved lower in the watershed. However, predicted average net increase between pre- and post-project value was dependent on taxonomic group. The increased average wetland area and changes in surrounding upland habitat composition among landscape positions were responsible for these differences. Net change in predicted densities of several grassland bird species at the four landscape positions was variable and species-dependent. Predicted waterfowl breeding activity was greater for lower drainage position wetlands. Although our models are simplistic and provide only a predictive index of potential habitat value, we believe such assessment exercises can provide a tool for coarse-level comparisons of alternative proposed project attributes and a basis for constructing informed hypotheses in auxiliary empirical field studies.

Iowa↗
USGS2009

Analysis of capture–recapture models with individual covariates using data augmentation

I consider the analysis of capture–recapture models with individual covariates that influence detection probability. Bayesian analysis of the joint likelihood is carried out using a flexible data augmentation scheme that facilitates analysis by Markov chain Monte Carlo methods, and a simple and straightforward implementation in freely available software. This approach is applied to a study of meadow voles ( Microtus pennsylvanicus ) in which auxiliary data on a continuous covariate (body mass) are recorded, and it is thought that detection probability is related to body mass. In a second example, the model is applied to an aerial waterfowl survey in which a double‐observer protocol is used. The fundamental unit of observation is the cluster of individual birds, and the size of the cluster (a discrete covariate) is used as a covariate on detection probability.

Biometrics↗
USGS2007

Ovarian follicle dynamics of female Greater Scaup during egg production

Studies of female waterfowl nutrient reserve use during egg production require a precise understanding of ovarian follicle dynamics to correctly interpret breeding status, and, therefore, derive proper inference. Concerns over numerical declines of North American scaup have increased the need to better understand the role of female condition in reproductive performance. We quantified ovarian follicle dynamics of female Greater Scaup ( Aythya marila ) breeding on the Yukon–Kuskokwim Delta, Alaska, using a method that accounts for within day variation in follicle size. We considered several models for describing changes in follicle growth with the best supported model estimating the duration of rapid follicle growth (RFG) to be 5.20 ± 0.52 days (±95% confidence intervals) for each developing follicle. Average diameter and dry mass of preovulatory follicles were estimated to be 9.36 mm and 0.26 g, respectively, at the onset of RFG, and these follicle characteristics were 41.47 mm and 15.57 g, respectively, at ovulation. The average diameter of postovulatory follicles immediately following ovulation was estimated to be 17.35 mm, regressing quickly over several days. In addition, we derived predictive equations using diameter and dry mass to estimate the number of days before, and after, ovulation for pre- and postovulatory follicles, as well as an equation to estimate dry mass of damaged follicles. Our results allow precise definition of RFG and nest initiation dates, clutch size, and the daily energetic and nutritional demands of egg production at the individual level. This study provides the necessary foundation for additional work on Greater Scaup reproductive energetics and physiology, and offers an approach for quantifying ovarian follicle dynamics in other species.

Journal of Field Ornithology↗
USGS2007

Latitudinal variation in population structure of wintering Pacific Black Brant

Latitudinal variation in population structure during the winter has been reported in many migratory birds, but has been documented in few species of waterfowl. Variation in environmental and social conditions at wintering sites can potentially influence the population dynamics of differential migrants. We examined latitudinal variation in sex and age classes of wintering Pacific Black Brant ( Branta bernicla nigricans ). Brant are distributed along a wide latitudinal gradient from Alaska to Mexico during the winter. Accordingly, migration distances for brant using different wintering locations are highly variable and winter settlement patterns are likely associated with a spatially variable food resource. We used resightings of brant banded in southwestern Alaska to examine sex and age ratios of birds wintering at Boundary Bay in British Columbia, and at San Quintin Bay, Ojo de Liebre Lagoon, and San Ignacio Lagoon in Baja California from 1998 to 2000. Sex ratios were similar among wintering locations for adults and were consistent with the mating strategy of geese. The distribution of juveniles varied among wintering areas, with greater proportions of juveniles observed at northern (San Quintin Bay and Ojo de Liebre Lagoon) than at southern (San Ignacio Lagoon) locations in Baja California. We suggest that age-related variation in the winter distribution of Pacific Black Brant is mediated by variation in productivity among individuals at different wintering locations and by social interactions among wintering family groups.

Journal of Field Ornithology↗
USGS2008

Predators of Dusky Canada Goose goslings and the effect of transmitters on gosling survival

The population of Dusky Canada Geese (Branta canadensis occidentalis) has been in long-term decline, likely due to reduced breeding productivity. To identify causes of mortality, we monitored goslings marked with radio transmitters on the western Copper River Delta, Alaska, from 1997 to 1999. Almost all gosling mortality (96%; 81 of 84) was due to predation, with mink (Mustela vison) and Bald Eagles (Haliaeetus leucocephalus) the most important predators. Bald Eagles are also major nest predators and, thus, appear to play a key role in limiting the breeding productivity of Dusky Canada Geese. Daily survival rate for goslings to 28 d of age was lower (0.011; 95% CI 0.002-0.024) for those with transmitters than for those without, but did not differ for older goslings (29-45 d). Although finer resolution in the timing of the transmitter effect within the first 28 d was not possible, we found that, by limiting our sample to goslings that survived until after 2-3 d posthatching, support for a transmitter effect was much reduced. Younger, smaller birds are inherently more vulnerable than older birds to transmitter effects. In addition, the process of radio-marking may have delayed the departure of goslings from nests and increased their risk of mortality shortly after hatching. Although radio transmitters may often be the only practical means for determining causes of mortality for young waterfowl, we suggest caution in using transmitters because of their potential negative effects, particularly during the first few days after hatching. ?? 2008 Association of Field Ornithologists.

Journal of Field Ornithology↗
USGS2010

Estimating carcass persistence and scavenging bias in a human‐influenced landscape in western Alaska

We examined variation in persistence rates of waterfowl carcasses placed along a series of transects in tundra habitats in western Alaska. This study was designed to assess the effects of existing tower structures and was replicated with separate trials in winter, summer and fall as both the resident avian population and the suite of potential scavengers varied seasonally. Carcass persistence rates were uniformly low, with <50% of carcasses persisting for more than a day on average. Persistence rate varied by carcass age, carcass size, among transects and was lowest in the fall and highest in the summer. We found little support for models where persistence varied in relation to the presence of tower structures. We interpret this as evidence that scavengers were not habituated to searching for carcasses near these structures. Our data demonstrate that only a small fraction of bird carcasses are likely to persist between searches, and if not appropriately accounted for, scavenging bias could significantly influence bird mortality estimates. The variation that we documented suggests that persistence rates should not be extrapolated among tower locations or across time periods as the variation in carcass persistence will result in biased estimates of total bird strike mortality.

Alaska↗
USGS2012

Avian influenza in shorebirds: experimental infection of ruddy turnstones (Arenaria interpres) with avian influenza virus

Background: Low pathogenic avian influenza viruses (LPAIV) have been reported in shorebirds, especially at Delaware Bay, USA, during spring migration. However, data on patterns of virus excretion, minimal infectious doses, and clinical outcome are lacking. The ruddy turnstone (Arenaria interpres) is the shorebird species with the highest prevalence of influenza virus at Delaware Bay. Objectives: The primary objective of this study was to experimentally assess the patterns of influenza virus excretion, minimal infectious doses, and clinical outcome in ruddy turnstones. Methods: We experimentally challenged ruddy turnstones using a common LPAIV shorebird isolate, an LPAIV waterfowl isolate, or a highly pathogenic H5N1 avian influenza virus. Cloacal and oral swabs and sera were analyzed from each bird. Results: Most ruddy turnstones had pre-existing antibodies to avian influenza virus, and many were infected at the time of capture. The infectious doses for each challenge virus were similar (103·6–104·16 EID50), regardless of exposure history. All infected birds excreted similar amounts of virus and showed no clinical signs of disease or mortality. Influenza A-specific antibodies remained detectable for at least 2 months after inoculation. Conclusions: These results provide a reference for interpretation of surveillance data, modeling, and predicting the risks of avian influenza transmission and movement in these important hosts.

Influenza and Other Respiratory Viruses↗
USGS2012

Moderating Argos location errors in animal tracking data

1. The Argos System is used worldwide to satellite-track free-ranging animals, but location errors can range from tens of metres to hundreds of kilometres. Low-quality locations (Argos classes A, 0, B and Z) dominate animal tracking data. Standard-quality animal tracking locations (Argos classes 3, 2 and 1) have larger errors than those reported in Argos manuals. 2. The Douglas Argos-filter (DAF) algorithm flags implausible locations based on user-defined thresholds that allow the algorithm's performance to be tuned to species' movement behaviours and study objectives. The algorithm is available in Movebank – a free online infrastructure for storing, managing, sharing and analysing animal movement data. 3. We compared 21,044 temporally paired global positioning system (GPS) locations with Argos location estimates collected from Argos transmitters on free-ranging waterfowl and condors (13 species, 314 individuals, 54,895 animal-tracking days). The 95th error percentiles for unfiltered Argos locations 0, A, B and Z were within 35·8, 59·6, 163·2 and 220·2 km of the true location, respectively. After applying DAF with liberal thresholds, roughly 20% of the class 0 and A locations and 45% of the class B and Z locations were excluded, and the 95th error percentiles were reduced to 17·2, 15·0, 20·9 and 18·6 km for classes 0, A, B and Z, respectively. As thresholds were applied more conservatively, fewer locations were retained, but they possessed higher overall accuracy. 4. Douglas Argos-filter can improve data accuracy by 50–90% and is an effective and flexible tool for preparing Argos data for direct biological interpretation or subsequent modelling.

Methods in Ecology and Evolution↗
USGS2016

Spatiotemporal patterns of duck nest density and predation risk: a multi-scale analysis of 18 years and more than 10,000 nests

Many avian species are behaviorally-plastic in selecting nest sites, and may shift to new locations or habitats following an unsuccessful breeding attempt. If there is predictable spatial variation in predation risk, the process of many individuals using prior experience to adaptively change nest sites may scale up to create shifting patterns of nest density at a population level. We used 18 years of waterfowl nesting data to assess whether there were areas of consistently high or low predation risk, and whether low-risk areas increased, and high-risk areas decreased in nest density the following year. We created kernel density maps of successful and unsuccessful nests in consecutive years and found no correlation in predation risk and no evidence for adaptive shifts, although nest density was correlated between years. We also examined between-year correlations in nest density and nest success at three smaller spatial scales: individual nesting fields (10–28 ha), 16-ha grid cells and 4-ha grid cells. Here, results were similar across all scales: we found no evidence for year-to-year correlation in nest success but found strong evidence that nest density was correlated between years, and areas of high nest success increased in nest density the following year. Prior research in this system has demonstrated that areas of high nest density have higher nest success, and taken together, our results suggest that ducks may adaptively select nest sites based on the local density of conspecifics, rather than the physical location of last year's nest. In unpredictable environments, current cues, such as the presence of active conspecific nests, may be especially useful in selecting nest sites. The cues birds use to select breeding locations and successfully avoid predators deserve continued attention, especially in systems of conservation concern.

Oikos↗
USGS2022

A lesser scaup (Aythya affinis ) naturally infected with Eurasian 2.3.4.4 highly pathogenic H5N1 avian influenza virus – Movement ecology and host factors

Despite the recognized role of wild waterfowl in the potential dispersal and transmission of highly pathogenic avian influenza (HPAI) virus, little is known about how infection affects these birds. This lack of information limits our ability to estimate viral spread in the event of an HPAI outbreak, thereby limiting our abilities to estimate and communicate risk. Here we present telemetry data from a wild Lesser Scaup ( Aythya affinis ), captured during a separate ecology study in the Chesapeake Bay, Maryland. This bird tested positive for infection with clade 2.3.4.4 HPAI virus of the A/goose/Guangdong/1/1996 (Gs/GD) H5N1 lineage (results received post-release) during the 2021–22 ongoing outbreaks in North America. While the infected bird was somewhat lighter than other adult males surgically implanted with transmitters (790g, ߂ = 868g, n = 11), it showed no clinical signs of infection at capture, during surgery, nor upon release. The bird died 3d later, pathology undetermined as the specimen was not able to be recovered. Analysis of movement data within the 3d window showed that the infected individual's maximum and average hourly movements (3894.3m, 428.8m respectively) were noticeably lower than noninfected conspecifics tagged and released the same day (߂ = 21594.5m, ߂ = 1097.9m, respectively; n = 4). We identified four instances where the infected bird had close contact (fixes located within 25m and 15 min) with another marked bird during this time. Collectively, these data suggest that the HPAI positive bird observed in this study may have been shedding virus for some period prior to death, with opportunities for direct bird to bird or environmental transmission. Although limited by low sample size and proximity to the time of tagging, we hope that these data will provide useful information as managers continue to respond to this ongoing outbreak event.

Transboundary and Emerging Diseases↗
USGS2007

Characterization of low-pathogenicity H5N1 avian influenza viruses from North America

Wild-bird surveillance in North America for avian influenza (AI) viruses with a goal of early identification of the Asian H5N1 highly pathogenic AI virus has identified at least six low-pathogenicity H5N1 AI viruses between 2004 and 2006. The hemagglutinin (HA) and neuraminidase (NA) genes from all 6 H5N1 viruses and an additional 38 North American wild-bird-origin H5 subtype and 28 N1 subtype viruses were sequenced and compared with sequences available in GenBank by phylogenetic analysis. Both HA and NA were phylogenetically distinct from those for viruses from outside of North America and from those for viruses recovered from mammals. Four of the H5N1 AI viruses were characterized as low pathogenicity by standard in vivo pathotyping tests. One of the H5N1 viruses, A/MuteSwan/MI/451072-2/06, was shown to replicate to low titers in chickens, turkeys, and ducks. However, transmission of A/MuteSwan/MI/451072-2/06 was more efficient among ducks than among chickens or turkeys based on virus shed. The 50% chicken infectious dose for A/MuteSwan/MI/451072-2/06 and three other wild-waterfowl-origin H5 viruses were also determined and were between 10 5.3 and 107.5 50% egg infective doses. Finally, seven H5 viruses representing different phylogenetic clades were evaluated for their antigenic relatedness by hemagglutination inhibition assay, showing that the antigenic relatedness was largely associated with geographic origin. Overall, the data support the conclusion that North American H5 wild-bird-origin AI viruses are low-pathogenicity wild-bird-adapted viruses and are antigenically and genetically distinct from the highly pathogenic Asian H5N1 virus lineage. Copyright ?? 2007, American Society for Microbiology. All Rights Reserved.

Journal of Virology↗
USGS2012

Emergence of fatal avian influenza in New England harbor seals

From September to December 2011, 162 New England harbor seals died in an outbreak of pneumonia. Sequence analysis of postmortem samples revealed the presence of an avian H3N8 influenza A virus, similar to a virus circulating in North American waterfowl since at least 2002 but with mutations that indicate recent adaption to mammalian hosts. These include a D701N mutation in the viral PB2 protein, previously reported in highly pathogenic H5N1 avian influenza viruses infecting people. Lectin staining and agglutination assays indicated the presence of the avian-preferred SA&alpha;-2,3 and mammalian SA&alpha;-2,6 receptors in seal respiratory tract, and the ability of the virus to agglutinate erythrocytes bearing either the SA&alpha;-2,3 or the SA&alpha;-2,6 receptor. The emergence of this A/harbor seal/Massachusetts/1/2011 virus may herald the appearance of an H3N8 influenza clade with potential for persistence and cross-species transmission.

Massachusetts↗
USGS2012

Phenology and duration of remigial moult in Surf Scoters ( Melanitta perspicillata ) and White-winged Scoters ( Melanitta fusca ) on the Pacific coast of North America

By quantifying phenology and duration of remigial moult in Surf Scoters ( Melanitta perspicillata (L., 1758)) and White-winged Scoters ( Melanitta fusca (L., 1758)), we tested whether timing of moult is dictated by temporal optima or constraints. Scoters (n = 3481) were captured during moult in Alaska, British Columbia, and Washington, and remigial emergence dates were determined. We provide evidence for a pre-emergence interval of 7.3 days that occurs after old primaries are shed and before new ones become visible. All age and sex classes of both scoter species exhibited a wide range of emergence dates (Surf Scoters: 26 June to 22 September; White-winged Scoters: 6 July to 21 September) suggestive of a lack of strong temporal optima for remigial moult. For both species, timing of moult was influenced by site, year, age, and sex. Relative to other waterfowl species, scoters have typical remigial growth rates (Surf Scoters: 3.9 mm·day –1 ; White-winged Scoters: 4.3 mm·day –1 ) but a long flightless period (34–49 days), in part because their relatively high wing-loading requires a greater proportion of feather regrowth to regain flight. Our data suggest that moulting scoters are not under strong selective pressure to complete moult quickly.

Alaska;British Columbia;Washington↗
USGS1987

Growth and physiological condition of black ducks reared on acidified wetlands

Acid deposition has been identified as one of several possible factors contributing to the decline of some waterfowl populations in North America. In an effort to examine the effects of acidification on black duck (Anas rubripes) recruitment, growth and physiological condition were monitored in ducklings foraging for a 10-day trial (days 10-20 of life) on acidified (pH 5.0) and : circumneutral (pH 6.8) fish-free emergent wetlands. Acidification of these wetlands suppressed phytoplankton and algal growth, and reduced invertebrate biomass. Ducklings maintained on acidified wetlands grew poorly compared with ducklings reared on circumneutral wetlands, as evidenced by lower final body weight and culmen and tarsus length. Plasma growth hormone concentration was elevated and triiodothyronine levels were lower in stunted ducklings, in part substantiating impairment of growth-regulating processes. Ducklings exhibiting poor growth tended to have lower hematocrit, lower plasma protein, glucose, and cholesterol concentrations, and higher uric acid levels, presumably reflecting alterations in metabolism and development due to inanition. These findings suggest that acid deposition may lower food production in wetlands and ultimately impair duckling growth, condition, and survival.

Canadian Journal of Zoology↗
USGS1994

Body size and condition, age, plumage quality, and foods of prenesting male cinnamon teal in relation to pair status

Male-biased sex ratios in waterfowl may contribute to sexual selection and permit females to be the deciding sex in mate selection. Male characteristics potentially influencing female choice include male age, size, plumage quality, and body condition (i.e., relative body mass, fat content, or protein content). By examining characteristics of prenesting male cinammon teal ( Anas cyanoptera ) relative to their pair status we evaluated the predictions that ( i ) paired males are older and physically superior to unpaired males and ( ii ) older and physically superior males pair in advance of other males. Diets of paired and unpaired males were similar, as were body size, ingesta-free body mass, fat, breast, and leg muscle protein contents, and testis, liver, and plumage masses. Likewise, pair status was not associated with male age. Body protein content and percentage of alternate plumage were generally greater in paired than unpaired males, but for some unpaired individuals these values were higher than the mean values for paired males. Thus, we found only limited evidence to support the above hypotheses. Our data suggest a possible link between winter nutrition and male participation in reproduction. That is, characteristics which enable males, during winter, to acquire nutrients for initiating and completing the prealternate molt in advance of other males also may be associated with ability to obtain a mate.

California↗
USGS2008

Prevalence of Influenza A viruses in wild migratory birds in Alaska: Patterns of variation in detection at a crossroads of intercontinental flyways

Background. The global spread of the highly pathogenic avian influenza H5N1 virus has stimulated interest in a better understanding of the mechanisms of H5N1 dispersal, including the potential role of migratory birds as carriers. Although wild birds have been found dead during H5N1 outbreaks, evidence suggests that others have survived natural infections, and recent studies have shown several species of ducks capable of surviving experimental inoculations of H5N1 and shedding virus. To investigate the possibility of migratory birds as a means of H5N1 dispersal into North America, we monitored for the virus in a surveillance program based on the risk that wild birds may carry the virus from Asia. Results. Of 16,797 birds sampled in Alaska between May 2006 and March 2007, low pathogenic avian influenza viruses were detected in 1.7% by rRT-PCR but no highly pathogenic viruses were found. Our data suggest that prevalence varied among sampling locations, species (highest in waterfowl, lowest in passerines), ages (juveniles higher than adults), sexes (males higher than females), date (highest in autumn), and analytical technique (rRT-PCR prevalence = 1.7%; virus isolation prevalence = 1.5%). Conclusion. The prevalence of low pathogenic avian influenza viruses isolated from wild birds depends on biological, temporal, and geographical factors, as well as testing methods. Future studies should control for, or sample across, these sources of variation to allow direct comparison of prevalence rates. ?? 2008 Ip et al; licensee BioMed Central Ltd.

Virology Journal↗