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A quantitative classification of the geography of non-native flora in the United States

Aim Non-native plants have the potential to harm ecosystems. Harm is classically related to their distribution and abundance, but this geographical information is often unknown. Here, we assess geographical commonness as a potential indicator of invasive status for non-native flora in the United States. Geographical commonness could inform invasion risk assessments across species and ecoregions. Location Conterminous United States. Time Period Through 2022. Major Taxa Studied Plants. Methods We compiled and standardised occurrence and abundance data from 14 spatial datasets and used this information to categorise non-native species as uncommon or common based on three dimensions of commonness: area of occupancy, habitat breadth and local abundance. To assess consistency in existing categorizations, we compared commonness to invasive status in the United States. We identified species with higher-than-expected abundance relative to their occupancy, habitat breadth or residence time. We calculated non-native plant richness within United States ecoregions and estimated unreported species based on rarefaction/extrapolation curves. Results This comprehensive database identified 1874 non-native plant species recorded in 4,844,963 locations. Of these, 1221 species were locally abundant (> 10% cover) in 797,759 unique locations. One thousand one hundred one non-native species (59%) achieved at least one dimension of commonness, including 565 species that achieved all three. Species with longer residence times tended to meet more dimensions of commonness. We identified 132 species with higher-than-expected abundance. Ecoregions in the central United States have the largest estimated numbers of unreported, abundant non-native plants. Main Conclusions A high proportion of non-native species have become common in the United States. However, existing categorizations of invasive species are not always consistent with species' abundance and distribution, even after considering residence time. Considering geographical commonness and higher-than-expected abundance revealed in this new dataset could support more consistent and proactive identification of invasive plants and lead to more efficient management practices.

Conterminous United States↗

Biology and invasive species in the western U.S

The diversity of environments that characterizes the West is responsible for the region's rich biological heritage. This ecological diversity also means that opportunities for invasive species are many, varied, and complex. Island ecosystems are notoriously vulnerable to invaders as demonstrated in Hawaii and West Coast offshore islands. Aquatic invaders impose high economic and environmental costs in systems as varied as San Francisco Bay and desert springs in the Great Basin. Although the West's arid and montane ecosystems may seem resistant to plant and animal invaders, we now know that ex-otic species have altered physical processes related to fire and hydrology in a manner favoring further expansion and persis-tence of invaders. Natural resource managers value analytical, mapping, and genetics tools developed by USGS scientists to monitor invasive species and help conserve biological systems. USGS biologists conduct research to assist land and water managers' efforts to control invasive species and restore natural systems. Throughout the West, the USGS carries out studies for early detection and rapid assessment of invaders. The following are some examples of how the USGS is making a difference in the western United States.

Fact Sheet↗

Techniques for restoring damaged Mojave and western Sonoran ecosystems, including those for threatened desert tortoises and Joshua trees

Ecological restoration has potential for contributing to conservation activities for threatened Mojave desert tortoises ( Gopherus agassizii ) and Joshua trees ( Yucca brevifolia , Y. jaegeriana ) and their broader ecosystems in the Mojave and western Sonoran deserts. To be effective, restoration actions deployed strategically need to halt and reverse habitat degradation, replenish or enhance resources used by both species (e.g., large shrubs for protection of tortoises and nurse plants facilitating recruitment of Joshua tree seedlings), and ideally foster resilience during likely future environmental changes. We synthesized restoration techniques and their effectiveness in the Mojave and western Sonoran deserts, provide estimated costs of candidate techniques, and anticipate future research needs for effective restoration in changing climates and environments. Over 50 published studies in the Mojave and western Sonoran deserts demonstrate that restoration can improve soil features (e.g., biocrusts), increase cover of native perennial and annual plants, enhance native seed retention and seed banks, and reduce risk of fires to conserve mature shrubland habitat. We placed restoration techniques into three categories: restoration of site environments, revegetation, and management actions to limit further disturbance and encourage recovery. Within these categories, 11 major restoration techniques (and their variations) were evaluated by at least one published study and range from geomorphic (e.g., reestablishing natural topographic patterns) and abiotic structural treatments (e.g., vertical mulching) to active revegetation (e.g., outplanting, seeding). For example, 16 outplanting studies assessed performance of 46 species to begin identifying top-performing species, associated treatments (e.g., protection from herbivory) required to aid outplant survival, and potential for outplants to trigger formation of self-sustaining populations. Creosote bush (Larrea tridentata), a shrub that tortoises use for cover and that serves as a nurse plant for Joshua tree recruitment, achieved at least 50% survival in five of eight studies. Estimated costs for restoring desert habitats varied primarily with the severity of the disturbance, site factors including the diversity of vegetation that was lost, logistical factors such as accessibility of sites (influencing transportation costs), and the cost-effectiveness of the restoration techniques chosen. The review highlights six major research and adaptive management needs for advancing desert habitat restoration. These needs include: 1) continued development of innovative techniques and bet-hedging approaches to provide managers with “tool boxes” of candidate treatments to deploy in dynamic environmental and management conditions, 2) identifying how to optimize spatial deployment of limited restoration resources, 3) developing practical techniques for reducing non-native annual grasses across spatial scales, 4) improving linkages between habitat enhancements and short- and long-term indicators of tortoise usage and responses and Joshua tree population sustainability, 5) mitigating multiple, interacting stressors with cumulative impacts, and 6) integrating biotic (e.g., seeding) and abiotic (e.g., fencing, shade structures) treatments to complement each other at site and landscape scales in dynamic climates and environments. It is possible that bet-hedging approaches employing multiple treatment types (or phased treatments across years) and greater incorporation of abiotic treatments, which are less sensitive to timing of precipitation compared with biotic treatments, will become increasingly important under future climates projected to be drier and more variable. Existing research suggests that restoration can be deployed effectively even under adverse climatic conditions, but success requires identifying suitable techniques tailored to dynamic environments.

Arizona, California, Nevada, Sonora↗

Metagenomic analysis of planktonic microbial consortia from a non-tidal urban-impacted segment of James River

Knowledge of the diversity and ecological function of the microbial consortia of James River in Virginia, USA, is essential to developing a more complete understanding of the ecology of this model river system. Metagenomic analysis of James River's planktonic microbial community was performed for the first time using an unamplified genomic library and a 16S rDNA amplicon library prepared and sequenced by Ion PGM and MiSeq, respectively. From the 0.46-Gb WGS library (GenBank:SRR1146621; MG-RAST:4532156.3), 4 × 10 6 reads revealed >3 × 10 6 genes, 240 families of prokaryotes, and 155 families of eukaryotes. From the 0.68-Gb 16S library (GenBank:SRR2124995; MG-RAST:4631271.3; EMB:2184), 4 × 10 6 reads revealed 259 families of eubacteria. Results of the WGS and 16S analyses were highly consistent and indicated that more than half of the bacterial sequences were Proteobacteria , predominantly Comamonadaceae . The most numerous genera in this group were Acidovorax (including iron oxidizers, nitrotolulene degraders, and plant pathogens), which accounted for 10 % of assigned bacterial reads. Polaromonas were another 6 % of all bacterial reads, with many assignments to groups capable of degrading polycyclic aromatic hydrocarbons. Albidiferax (iron reducers) and Variovorax (biodegraders of a variety of natural biogenic compounds as well as anthropogenic contaminants such as polycyclic aromatic hydrocarbons and endocrine disruptors) each accounted for an additional 3 % of bacterial reads. Comparison of these data to other publically-available aquatic metagenomes revealed that this stretch of James River is highly similar to the upper Mississippi River, and that these river systems are more similar to aquaculture and sludge ecosystems than they are to lakes or to a pristine section of the upper Amazon River. Taken together, these analyses exposed previously unknown aspects of microbial biodiversity, documented the ecological responses of microbes to urban effects, and revealed the noteworthy presence of 22 human-pathogenic bacterial genera (e.g., Enterobacteriaceae , pathogenic Pseudomonadaceae , and ‘ Vibrionales' ) and 6 pathogenic eukaryotic genera (e.g., Trypanosomatidae and Vahlkampfiidae). This information about pathogen diversity may be used to promote human epidemiological studies, enhance existing water quality monitoring efforts, and increase awareness of the possible health risks associated with recreational use of James River.

Virginia↗

Expansion trends and impacts of Phragmites australis on the Louisiana Gulf Coast

Invasive plant species pose substantial threats to ecosystem integrity by disrupting ecosystem processes, reducing biodiversity, and complicating restoration and management efforts. Non-native lineages of Phragmites australis are invasive in wetlands across parts of North America, causing declines in the diversity of native wetland plants and disrupting biogeochemical cycles. Despite recognition of these effects, important knowledge gaps remain regarding the spatiotemporal dynamics, environmental drivers, and consequences of Phragmites expansion for native communities. Here, we examined long-term data from the Louisiana Coastwide Reference Monitoring System (CRMS), collected from 2006 to 2023 and spanning 390 sites across nine basins, to quantify basin-specific Phragmites cover trajectories and evaluate their associations with co-occurring native plant cover and soil properties. Louisiana supports both long-established noninvasive and (since ~2000) invasive European P. australis lineages, but CRMS cannot distinguish them; thus, our basin-level trajectories reflect species-level cover dynamics that may integrate lineage-specific turnover. Phragmites dynamics varied markedly among basins over the study period: Phragmites cover decreased in the Mississippi River Delta (initially >25%), whereas the Calcasieu-Sabine, Mermentau, Teche-Vermilion, and Terrebonne basins, each starting with <5%, exhibited positive expansion trends. The remaining four basins maintained low and stable Phragmites cover (<5%) over the study period. These distinct basin-level trajectories may reflect basin-to-basin differences in a hydrogeomorphic setting and associated sediment and nutrient inputs. In basins with positive expansion trends, Phragmites cover was associated with decreases in native plant cover. Overall, Phragmites expansion was positively associated with higher soil nutrients, lower pH, and higher salinity, highlighting key environmental factors that could inform targeted management to prevent or mitigate its expansion. Although Phragmites cover remains low in most basins (<10%), expansion in several basins suggests the value of basin-specific early-warning monitoring to maintain native plant cover and associated ecosystem functions. Our two-step framework offers a transferable monitoring template that integrates Phragmites cover trends (expanding/stable/declining), concurrently measured native plant cover, and key soil and pore-water indicators to flag emerging hotspots and prioritize adaptive management in other estuarine and deltaic systems.

Louisiana↗

Mapping tree canopy cover in support of proactive prairie grouse conservation in western North America

Invasive woody plant expansion is a primary threat driving fragmentation and loss of sagebrush ( Artemisia spp.) and prairie habitats across the central and western United States. Expansion of native woody plants, including conifer (primarily Juniperus spp.) and mesquite ( Prosopis spp.), over the past century is primarily attributable to wildfire suppression, historic periods of intensive livestock grazing, and changes in climate. To guide successful conservation programs aimed at reducing top-down stressors, we mapped invasive woody plants at regional scales to evaluate landscape level impacts, target restoration actions, and monitor restoration outcomes. Our overarching goal was to produce seamless regional products across sociopolitical boundaries with resolution fine enough to depict the spatial extent and degree of woody plant invasion relevant to greater sage-grouse (Centrocercus urophasianus) and lesser prairie-chicken (Tympanuchus pallidicinctus) conservation efforts. We mapped tree canopy cover at 1-m spatial resolution across an 11-state region (508 265 km 2 ). Greater than 90% of occupied lesser prairie-chicken habitat was largely treeless for conifers (< 1% canopy cover), whereas > 67% was treeless for mesquite. Conifers in the higher canopy cover classes (16 − 50% and > 50% canopy cover) were scarce (< 2% and 1% canopy cover), as was mesquite (< 5% and 1% canopy cover). Occupied habitat by sage-grouse was more variable but also had a relatively large proportion of treeless areas ( x &#x2212; "> x− = 71, SE = 5%). Low to moderate levels of conifer cover (1 − 20%) were fewer ( x &#x2212; "> x− = 23, SE = 5%) as were areas in the highest cover class (> 50%; x &#x2212; "> x− = 6, SE = 2%). Mapping indicated that a high proportion of invading woody plants are at a low to intermediate level. Canopy cover maps for conifer and mesquite resulting from this study provide the first and most geographically complete, high-resolution assessment of woody plant cover as a top-down threat to western sage-steppe and prairie ecosystems.

Rangeland Ecology and Management↗

Predicting the effects of solar energy development on plants and wildlife in the Desert Southwest, United States

Utility-scale solar energy (USSE) is rapidly expanding and expected to compose the largest source of renewable-generated electricity in the United States and globally over the coming decades. Lands in the hot Desert Southwest (Chihuahuan, Mojave, Sonoran, and San Joaquin Deserts) are increasingly selected for USSE development because of their high solar irradiance. The Desert Southwest supports high biodiversity and provides many ecosystem services but is vulnerable to USSE disturbance and simultaneous stress from aridification and other growing land-use pressures. In this review, a framework is presented for predicting the effects of USSE development on plants and wildlife by linking disturbance types associated with USSE construction and operation to the traits and response strategies of species and guilds. Case studies from representative Desert Southwest species and guilds of conservation concern are used to: review known effects of USSE, predict unknown effects with the trait-based framework, and discuss mitigation strategies. This framework predicts that species with trait plasticity and broad ecological niches will be capable of exploiting USSE development, while species with specific habitat requirements and narrow niches will be more vulnerable. Opportunities for mitigation during development and operation that may lessen these effects are identified. This work is intended to inform USSE management decision-making and long-term planning, as well as encourage new research to test predicted effects and responses.

Renewable & Sustainable Energy Reviews (RSER)↗

Spatial correlations of Diceroprocta apache and its host plants: Evidence for a negative impact from Tamarix invasion

1. The hypothesis that the habitat-scale spatial distribution of the Apache cicada Diceroprocta apache Davis is unaffected by the presence of the invasive exotic saltcedar Tamarix ramosissima was tested using data from 205 1-m 2 quadrats placed within the flood-plain of the Bill Williams River, Arizona, U.S.A. Spatial dependencies within and between cicada density and habitat variables were estimated using Moran's I and its bivariate analogue to discern patterns and associations at spatial scales from 1 to 30 m. 2. Apache cicadas were spatially aggregated in high-density clusters averaging 3 m in diameter. A positive association between cicada density, estimated by exuvial density, and the per cent canopy cover of a native tree, Goodding's willow Salix gooddingii , was detected in a non-spatial correlation analysis. No non-spatial association between cicada density and saltcedar canopy cover was detected. 3. Tests for spatial cross-correlation using the bivariate I YZ indicated the presence of a broad-scale negative association between cicada density and saltcedar canopy cover. This result suggests that large continuous stands of saltcedar are associated with reduced cicada density. In contrast, positive associations detected at spatial scales larger than individual quadrats suggested a spill-over of high cicada density from areas featuring Goodding's willow canopy into surrounding saltcedar monoculture. 4. Taken together and considered in light of the Apache cicada's polyphagous habits, the observed spatial patterns suggest that broad-scale factors such as canopy heterogeneity affect cicada habitat use more than host plant selection. This has implications for management of lower Colorado River riparian woodlands to promote cicada presence and density through maintenance or creation of stands of native trees as well as manipulation of the characteristically dense and homogeneous saltcedar canopies.

Ecological Entomology↗

Does restoration of plant diversity trigger concomitant soil microbiome changes in dryland ecosystems?

Drylands are highly vulnerable to land degradation, and despite increasing efforts, restoration success remains low. Although often ignored in the design and deployment of management strategies, soil microbial communities might be critical for dryland restoration due to their central role in promoting soil stability, nutrient cycling and plant establishment. We collected soil samples from eight dryland restoration sites within RestoreNet, a restoration field trial network, and determined their soil microbiome using 16S rRNA (bacteria and archaea) and ITS (fungi) amplicon sequencing. Each previously degraded site was treated with monoculture (single species) and polyculture (multiple species) seedling plantings. Contrary to our initial expectations, we found that these different revegetation interventions did not trigger changes in microbial diversity, composition or relative abundance of functional groups across sites after 1 year of revegetation. Synthesis and applications . Considering the crucial role of soil micro-organisms in dryland ecosystem functions, our results suggest that site-specific targeted microbiome restoration should be considered to accelerate the establishment of desired microbial communities. Plant community-based restoration practices such as revegetation have a limited impact on soil micro-organisms in the short term.

Journal of Applied Ecology↗

Performance of quantitative vegetation sampling methods across gradients of cover in Great Basin plant communities

Resource managers and scientists need efficient, reliable methods for quantifying vegetation to conduct basic research, evaluate land management actions, and monitor trends in habitat conditions. We examined three methods for quantifying vegetation in 1-ha plots among different plant communities in the northern Great Basin: photography-based grid-point intercept (GPI), line-point intercept (LPI), and point-quarter (PQ). We also evaluated each method for within-plot subsampling adequacy and effort requirements relative to information gain. We found that, for most functional groups, percent cover measurements collected with the use of LPI, GPI, and PQ methods were strongly correlated. These correlations were even stronger when we used data from the upper canopy only (i.e., top “hit” of pin flags) in LPI to estimate cover. PQ was best at quantifying cover of sparse plants such as shrubs in early successional habitats. As cover of a given functional group decreased within plots, the variance of the cover estimate increased substantially, which required more subsamples per plot (i.e., transect lines, quadrats) to achieve reliable precision. For GPI, we found that that six–nine quadrats per hectare were sufficient to characterize the vegetation in most of the plant communities sampled. All three methods reasonably characterized the vegetation in our plots, and each has advantages depending on characteristics of the vegetation, such as cover or heterogeneity, study goals, precision of measurements required, and efficiency needed.

Idaho;Oregon↗

Delineation of landform and lithologic units for Ecological Landtype-Association analysis in Glacier Bay National Park, Southeast Alaska

Landform and generalized bedrock lithologic units have been delineated for ecological landtype association analysis in Glacier Bay National Park in southeast Alaska (as the Park boundaries were defined before the 1971 Alaska National Interest Lands expansion). Related U.S. Forest Service efforts have covered (1) the whole region at coarse ecological- unit scale, including domains, divisions, provinces, sections, and subsections; and (2) small parts the region at subsection scale. These small parts are generally forest-covered shoreline to timberline areas with relatively subdued topography, extensive bedrock exposures, and no active glaciers. The detailed studies established that the combination of landform and bedrock-lithologic information was a good indicator of ecosystem productivity and types of plant communities. This study of Glacier Bay National Park covers areas similar to those of the detailed studies but also includes a large proportion of high (15,300 feet), glacier-clad alpine terrain and large, active-valley glacier systems. This terrain reflects (1) the orographic and microclimatic effects associated with the high-altitude barrier that is the Fairweather Range part of the St. Elias Mountains and its rapidly retreating glaciers, and (2) the geologic, tectonic, and erosional history of this range. In this study, landforms were classified-by using topographic maps and personal experience-into eight categories similar to those used by the U.S. Forest Service. The 90 bedrock-lithologic units on the current Glacier Bay geologic map were classified into 13 generalized lithologic units corresponding exactly to those used by the U.S. Forest Service. Incomplete storm-track, storm-intensity, and limited climatic information have also been compiled.

Scientific Investigations Report↗

Potential effects of sea-level rise on plant productivity: Species-specific responses in northeast Pacific tidal marshes

Coastal wetland plants are adapted to varying degrees of inundation. However, functional relationships between inundation and productivity are poorly characterized for most species. Determining species-specific tolerances to inundation is necessary to evaluate sea-level rise (SLR) effects on future marsh plant community composition, quantify organic matter inputs to marsh accretion, and inform predictive modeling of tidal wetland persistence. In 2 macrotidal estuaries in the northeast Pacific we grew 5 common species in experimental mesocosms across a gradient of tidal elevations to assess effects on growth. We also tested whether species abundance distributions along elevation gradients in adjacent marshes matched productivity profiles in the mesocosms. We found parabolic relationships between inundation and total plant biomass and shoot counts in Spartina foliosa and Bolboschoenus maritimus in California, USA, and in Carex lyngbyei in Oregon, USA, with maximum total plant biomass occurring at 38, 28, and 15% time submerged, respectively. However, biomass of Salicornia pacifica and Juncus balticus declined monotonically with increasing inundation. Inundation effects on the ratio of belowground to aboveground biomass varied inconsistently among species. In comparisons of field distributions with mesocosm results, B. maritimus , C. lyngbyei and J. balticus were abundant in marshes at or above elevations corresponding with their maximum productivity; however, S. foliosa and S. pacifica were frequently abundant at lower elevations corresponding with sub-optimal productivity. Our findings show species-level differences in how marsh plant growth may respond to future SLR and highlight the sensitivity of high marsh species such as S. pacifica and J. balticus to increases in flooding.

California, Oregon↗

Ecology and behaviour of the Alder Flycatcher Empidonax alnorum, Tyrannidae in winter

The Alder Flycatcher Empidonax alnorum (Tyrannidae) winters from Colombia and Venezuela, south to northern Argentina. We studied the species in Manu National Park, Madre de Dios, Peru. In this area the species occupies riparian zones along lowland meander rivers as well as adjacent transition zone forest in the floodplain. These habitats have a number of age-related longitudinal zones (parallel to the river margin) that are short term (I-2 year) transitory stages in the succession to floodplain forest. The fast growing plant species that make up these habitats are suitable for commercial harvest for paper pulp. We examined habitat use of the species in an attempt to identify the effects of such harvest and resulting habitat loss on these birds. The Alder Flycatcher favours two longitudinal zones where it establishes territories. The territories may be long-term or transitory, and are often occupied and defended by two individuals, generally of different age. One bird tends to be more active in territory defence than the other. Defence involves patrolling, vocal duels, and chases. Birds sally for insects but also eat large quantities of fruit.

Book chapter↗

Ecology and behaviour of the Alder Flycatcher Empidonax alnorum, Tyrannidae in winter

The Alder Flycatcher Empidonax alnorum (Tyrannidae) winters from Colombia and Venezuela, south to northern Argentina. We studied the species in Manu National Park, Madre de Dios, Peru. In this area the species occupies riparian zones along lowland meander rivers as well as adjacent transition zone forest in the floodplain. These habitats have a number of age-related longitudinal zones (parallel to the river margin) that are short term (I-2 year) transitory stages in the succession to floodplain forest. The fast growing plant species that make up these habitats are suitable for commercial harvest for paper pulp. We examined habitat use of the species in an attempt to identify the effects of such harvest and resulting habitat loss on these birds. The Alder Flycatcher favours two longitudinal zones where it establishes territories. The territories may be long-term or transitory, and are often occupied and defended by two individuals, generally of different age. One bird tends to be more active in territory defence than the other. Defence involves patrolling, vocal duels, and chases. Birds sally for insects but also eat large quantities of fruit.

Book chapter↗

Factors affecting post-control reinvasion by seed of an invasive species, Phragmites australis , in the central Platte River, Nebraska.

Invasive plants, such as Phragmites australis , can profoundly affect channel environments of large rivers by stabilizing sediments and altering water flows. Invasive plant removal is considered necessary where restoration of dynamic channels is needed to provide critical habitat for species of conservation concern. However, these programs are widely reported to be inefficient. Post-control reinvasion is frequent, suggesting increased attention is needed to prevent seed regeneration. To develop more effective responses to this invader in the Central Platte River (Nebraska, USA), we investigated several aspects of Phragmites seed ecology potentially linked to post-control reinvasion, in comparison to other common species: extent of viable seed production, importance of water transport, and regeneration responses to hydrology. We observed that although Phragmites seed does not mature until very late in the ice-free season, populations produce significant amounts of viable seed (>50 % of filled seed). Most seed transported via water in the Platte River are invasive perennial species, although Phragmites abundances are much lower than species such as Lythrum salicaria , Cyperus esculentus and Phalaris arundinacea . Seed regeneration of Phragmites varies greatly depending on hydrology, especially timing of water level changes. Flood events coinciding with the beginning of seedling emergence reduced establishment by as much as 59 % compared to flood events that occurred a few weeks later. Results of these investigations suggest that prevention of seed set (i.e., by removal of flowering culms) should be a priority in vegetation stands not being treated annually. After seeds are in the seedbank, preventing reinvasion using prescribed flooding has a low chance of success given that Phragmites can regenerate in a wide variety of hydrologic microsites.

Nebraska↗

Exploring and mitigating plague for One Health purposes

Purpose of Review In 2020, the Appropriations Committee for the U.S. House of Representatives directed the CDC to develop a national One Health framework to combat zoonotic diseases, including sylvatic plague, which is caused by the flea-borne bacterium Yersinia pestis . This review builds upon that multisectoral objective. We aim to increase awareness of Y. pestis and to highlight examples of plague mitigation for One Health purposes (i.e., to achieve optimal health outcomes for people, animals, plants, and their shared environment). We draw primarily upon examples from the USA, but also discuss research from Madagascar and Uganda where relevant, as Y. pestis has emerged as a zoonotic threat in those foci. Recent Findings Historically, the bulk of plague research has been directed at the disease in humans. This is not surprising, given that Y. pestis is a scourge of human history. Nevertheless, the ecology of Y. pestis is inextricably linked to other mammals and fleas under natural conditions. Accumulating evidence demonstrates Y. pestis is an unrelenting threat to multiple ecosystems, where the bacterium is capable of significantly reducing native species abundance and diversity while altering competitive and trophic relationships, food web connections, and nutrient cycles. In doing so, Y. pestis transforms ecosystems, causing “shifting baselines syndrome” in humans, where there is a gradual shift in the accepted norms for the condition of the natural environment. Eradication of Y. pestis in nature is difficult to impossible, but effective mitigation is achievable; we discuss flea vector control and One Health implications in this context. Summary There is an acute need to rapidly expand research on Y. pestis , across multiple host and flea species and varied ecosystems of the Western US and abroad, for human and environmental health purposes. The fate of many wildlife species hangs in the balance, and the implications for humans are profound in some regions. Collaborative multisectoral research is needed to define the scope of the problem in each epidemiological context and to identify, refine, and implement appropriate and effective mitigation practices.

Current Tropical Medicine Reports↗

USGS research on Florida's isolated freshwater wetlands

The U.S. Geological Survey (USGS) has studied wetland hydrology and its effects on wetland health and ecology in Florida since the 1990s. USGS wetland studies in Florida and other parts of the Nation provide resource managers with tools to assess current conditions and regional trends in wetland resources. Wetland hydrologists in the USGS Florida Water Science Center (FLWSC) have completed a number of interdisciplinary studies assessing the hydrology, ecology, and water quality of wetlands. These studies have expanded the understanding of wetland hydrology, ecology, and related processes including: (1) the effects of cyclical changes in rainfall and the influence of evapotranspiration; (2) surface-water flow, infiltration, groundwater movement, and groundwater and surfacewater interactions; (3) the effects of water quality and soil type; (4) the unique biogeochemical components of wetlands required to maintain ecosystem functions; (5) the effects of land use and other human activities; (6) the influences of algae, plants, and invertebrates on environmental processes; and (7) the effects of seasonal variations in animal communities that inhabit or visit Florida wetlands and how wetland function responds to changes in the plant community.

Florida↗

Monitoring and research at Walnut Creek National Wildlife Refuge

Walnut Creek National Wildlife Refuge-Prairie Learning Center (Walnut Creek or the Refuge) is one of the newest additions to the National Wildlife Refuge System, which consists of over 480 units throughout the United States operated by the U.S. Department of the Interior, Fish and Wildlife Service (the Service). Located about 20 miles east of Des Moines, Iowa, the Refuge has an approved acquisition boundary containing 8,654 acres (Figure 1). Acquisition is from willing sellers only, and to date the Service has purchased approximately 5,000 acres. The acquisition boundary encompasses about 43% of the watershed of Walnut Creek, which bisects the Refuge and drains into the Des Moines River to the southeast. Approximately 25%-30% of the Walnut Creek watershed is downstream of the Refuge. As authorized by Congress in 1990, the purposes of the Refuge are to (U.S. Fish and Wildlife Service 1992): • restore native tallgrass pairie, wetland, and woodland habitats for breeding and migratory waterfowl and resident wildlife; • serve as a major environmental education center providing opportunities for study; • provide outdoor recreation benefits to the public; and • provide assistance to local landowners to improve their lands for wildlife habitat. To implement these purposes authorized by Congress, the Refuge has established the goal of recreating as nearly as possible the natural communities that existed at the time of settlement by Euro-Americans (circa 1840). Current land use is largely agricultural, including 69% cropland, 17% grazed pasture, and 7.5% grassland (dominantly brome) enrolled in the Conservation Reserve Program). About 1,395 acres of relict native communities also exist on the Refuge, including prairie (725 acres), oak savanna and woodland (450 acres), and riparian or wetland areas (220 acres). Some of these relicts are highly restorable; others contain only a few prairie plants in a matrix of brome and will be more difficult to restore. When the process of restoration (management and enhancement of existing remnant communities) and reconstruction (reestablishment of native communities on agricultural sites) is completed, it is anticipated that the Refuge will consist of approximately 5,900 acres of prairie, 2,000 acres of oak savanna or woodland, and 750 acres of wetland and riparian communities. Ecological restoration and reconstruction at this scale in the tallgrass prairie ecosystem is unprecedented in the United States.

Report↗