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USGS2012

Greater sage-grouse winter habitat use on the eastern edge of their range

Greater sage-grouse (Centrocercus urophasianus) at the western edge of the Dakotas occur in the transition zone between sagebrush and grassland communities. These mixed sagebrush (Artemisia sp.) and grasslands differ from those habitats that comprise the central portions of the sage-grouse range; yet, no information is available on winter habitat selection within this region of their distribution. We evaluated factors influencing greater sage-grouse winter habitat use in North Dakota during 2005–2006 and 2006–2007 and in South Dakota during 2006–2007 and 2007–2008. We captured and radio-marked 97 breeding-age females and 54 breeding-age males from 2005 to 2007 and quantified habitat selection for 98 of these birds that were alive during winter. We collected habitat measurements at 340 (177 ND, 163 SD) sage-grouse use sites and 680 random (340 each at 250 m and 500 m from locations) dependent sites. Use sites differed from random sites with greater percent sagebrush cover (14.75% use vs. 7.29% random; P < 0.001), percent total vegetation cover (36.76% use vs. 32.96% random; P ≤ 0.001), and sagebrush density (2.12 plants/m 2 use vs. 0.94 plants/m 2 random; P ≤ 0.001), but lesser percent grass cover (11.76% use vs. 16.01% random; P ≤ 0.001) and litter cover (4.34% use vs. 5.55% random; P = 0.001) and lower sagebrush height (20.02 cm use vs. 21.35 cm random; P = 0.13) and grass height (21.47 cm use vs. 23.21 cm random; P = 0.15). We used conditional logistic regression to estimate winter habitat selection by sage-grouse on continuous scales. The model sagebrush cover + sagebrush height + sagebrush cover × sagebrush height (w i = 0.60) was the most supported of the 13 models we considered, indicating that percent sagebrush cover strongly influenced selection. Logistic odds ratios indicated that the probability of selection by sage-grouse increased by 1.867 for every 1% increase in sagebrush cover (95% CI = 1.627–2.141) and by 1.041 for every 1 cm increase in sagebrush height (95% CI = 1.002–1.082). The interaction between percent sagebrush canopy cover and sagebrush height (β = −0.01, SE ≤ 0.01; odds ratio = 0.987 [95% CI = 0.983–0.992]) also was significant. Management could focus on avoiding additional loss of sagebrush habitat, identifying areas of critical winter habitat, and implementing management actions based on causal mechanisms (e.g., soil moisture, precipitation) that affect sagebrush community structure in this region.

Journal of Wildlife Management↗

USGS2010

Fix success and accuracy of GPS radio collars in old-growth temperate coniferous forests

Global Positioning System (GPS) telemetry is used extensively to study animal distribution and resource selection patterns but is susceptible to biases resulting from data omission and spatial inaccuracies. These data errors may cause misinterpretation of wildlife habitat selection or spatial use patterns. We used both stationary test collars and collared free-ranging American black bears ( Ursus americanus ) to quantify systemic data loss and location error of GPS telemetry in mountainous, old-growth temperate forests of Olympic National Park, Washington, USA. We developed predictive models of environmental factors that influence the probability of obtaining GPS locations and evaluated the ability of weighting factors derived from these models to mitigate data omission biases from collared bears. We also examined the effects of microhabitat on collar fix success rate and examined collar accuracy as related to elevation changes between successive fixes. The probability of collars successfully obtaining location fixes was positively associated with elevation and unobstructed satellite view and was negatively affected by the interaction of overstory canopy and satellite view. Test collars were 33% more successful at acquiring fixes than those on bears. Fix success rates of collared bears varied seasonally and diurnally. Application of weighting factors to individual collared bear fixes recouped only 6% of lost data and failed to reduce seasonal or diurnal variation in fix success, suggesting that variables not included in our model contributed to data loss. Test collars placed to mimic bear bedding sites received 16% fewer fixes than randomly placed collars, indicating that microhabitat selection may contribute to data loss for wildlife equipped with GPS collars. Horizontal collar errors of >800 m occurred when elevation changes between successive fixes were >400 m. We conclude that significant limitations remain in accounting for data loss and error inherent in using GPS telemetry in coniferous forest ecosystems and that, at present, resource selection patterns of large mammals derived from GPS telemetry should be interpreted cautiously.

Washington↗

USGS2020

Using thermal infrared cameras to detect avian chicks at various distances and vegetative coverages

Population monitoring of nesting waterbirds often involves frequent entries into the colony, but alternative methods such as local remotely sensed thermal imaging may help reduce disturbance while providing a cost-effective way to survey breeding populations. Such an approach can have high initial costs, however, which may have reduced the number of studies investigating functionality of paired thermal infrared camera and small unmanned aerial systems. Here, we take the first step of exploring the ability of two thermal infrared cameras to detect an avian chick under varying vegetative cover and distances, preceding field-mounting applications on a small unmanned aerial system. We created seven “bioboxes” to simulate a range of natural vegetation types and densities for a globally important colonial ground-nesting waterbird species, the common tern Sterna hirundo . We placed a juvenile chicken Gallus gallus (surrogate for the locally endangered common tern) in each box, and we tested two market-accessible infrared cameras (produced by FLIR Systems and Infrared Cameras, Inc.) at five elevations using a stationary boom (maximum height = 12 m). We applied computer-based digital thresholding to collected images, identifying pixels meeting one of seven threshold values. The chick was visible from at least one threshold value in 19 and 31 of 35 processed by the FLIR Systems and Infrared Cameras, respectively. Percentage of the chick identified across thresholds was generally highest at lower threshold values and elevations and decreased as elevation and threshold increased; however, the relative importance of each variable changed dramatically across bioboxes and camera types. Ability to detect a chick from processed images generally decreased with increasing elevation, and although we made no quantitative comparisons among boxes, detectability appeared greatest in images from both cameras when little or no vegetation was present. Interestingly, no single threshold value was best for all bioboxes. We observed notable differences between cameras including visual resolution of detected temperature differentials and image processing speed. Results of this controlled study show promise for the use of thermal infrared systems for detecting cryptic species in vegetation. Future research should work to combine thermal infrared and visual sensors with small unmanned aerial systems to test applicability in a mobile field application.

Journal of Fish and Wildlife Management↗

USGS2005

A complete species census and evidence for regional declines in piping plovers

Complete population estimates for widely distributed species are rarely possible. However, for the third time in 10 years, an International Piping Plover ( Charadrius melodus ) Breeding and Winter Census was conducted throughout the species range in 2001. Nearly 1,400 participants from 32 U.S. states and Puerto Rico; 9 Canadian provinces; St. Pierre and Miquelon, France; Cuba; and the Bahamas visited 2,244 sites covering 11,836 km of shoreline habitat. During the winter census, 2,389 piping plovers were observed at 33.5% of potentially occupied sites ( n = 352). Of these, 56.8% had ≤ 10 birds present. The breeding census recorded 5,945 adults at 777 of 1,892 sites surveyed. More than 80% of sites with piping plovers present had ≤ 10 birds. Results indicated an 8.4% increase from 1991 but only a 0.2% increase since 1996. Regional trends suggest that since 1991, number of breeding birds increased on the Atlantic Coast by 78% (2,920 birds; 12.4% increase since 1996) and by 80% in the Great Lakes (72 birds; 50% increase since 1996). However, plovers declined 15% (2,953 birds; 10% decline since 1996) in Prairie Canada/U.S. northern Great Plains. Subregional trends since 1991 reflect a 32.4% decline in Prairie Canada (972 birds; 42.4% decline since 1996), a 2.5% decline in the U.S. northern Great Plains (1,981 birds; 24% increase since 1996), 5.5% decline in eastern Canada (481 birds; 14% increase since 1996), although a 66.2% increase on the U.S. Atlantic Coast (2,430 birds; 12% since 1996). While numbers were down in much of the U.S. northern Great Plains since 1996, an increase (460%, 1,048 birds; 67.7% increase since 1991) was detected on the Missouri River. Results from 3 complete species census efforts provide essential data for conservation planning and assessment and illustrate the utility of global censuses for species of concern.

Journal of Wildlife Management↗

USGS2005

Seismicity and tilt associated with the 2003 Anatahan eruption sequence

On May 10, 2003, the first historical eruption of Anatahan volcano in the western Pacific Mariana Islands was fortuitously recorded by a broadband seismograph installed on the island only 4 days prior to the eruption. This station, located 7 km WNW of the active crater, together with another broadband seismograph on Sarigan Island 45 km to the north, continued to operate throughout the 2-month period of major eruptive activity in May and June and throughout the majority of the following year. In June 2003, the Saipan Emergency Management Office and the US Geological Survey installed two telemetered high-gain short-period seismic stations to monitor the activity in real-time. The only earthquakes detected in the 4-day period from the initial seismograph installation until 6 h prior to the eruption occurred approximately 20 km to the northeast of the island on May 8. The first volcano-tectonic (VT) event located near the volcano occurred at 01:53 GMT on May 10. The number of events per hour then increased dramatically and a period of about 80 discrete earthquakes per hour commenced at about 06:20 GMT, immediately prior to the estimated eruption time of 07:30 from the Volcanic Ash Advisory Center. A long-period tilt signal recorded on the horizontal components of the broadband seismograph, indicating upward movement of the crater region, also commenced at about 06:20. Inflation continued until 09:30, when the direction of tilt reversed. Deflation continued until 17:50, coinciding with a reduction in the number of VT events. The larger VT events were located with a linearized least-squares location algorithm. Magnitudes of located VT events on May 10 ranged from 2.0 to 3.2, but a period of larger VT events were recorded on May 11, with the largest M 4.2. After about 36 h of intense earthquake activity, the number of discrete VT events declined and was replaced by nearly continuous volcanic tremor for the next 6 weeks. Differing types of very long-period events may suggest complex non-destructive magmatic source mechanisms, persisting dominantly throughout the first 10 days of the initial eruption. Visual reports indicate that a small craggy dome extruded sometime between May 20 and June 5. From analogy with other volcanic dome extrusions, we believe the dome probably extruded just as the tremor amplitude decreased dramatically about May 24. This dome was then destroyed between June 13 and 14. Reduced displacement of the co-eruption tremor is estimated as approximately 40-80 cm2, suggesting an eruption with a Volcanic Explosivity Index of about 3. 2005 Elsevier B.V. All rights reserved.

Northern Mariana Islands↗

USGS2023

Sustainable aquifer management for food security

In aquifer-dependent regions, balancing aquifer protection, desalination, economic development, agricultural irrigation, and food security can be better managed through discovery and development of sources of sustainable groundwater pumping. Aquifer desalination for irrigation to protect food security can mitigate pressure on local freshwater aquifers. Despite its importance, little peer reviewed work to date has identified the economic capacity to pay for aquifer desalination for irrigation to mitigate freshwater aquifer drawdown. The novel contribution of this work is the development and application of an innovative method to assess the economic capacity to pay for aquifer desalination for irrigation for a recently discovered large saline aquifer. It develops an original framework to assess the capacity to pay for aquifer desalination, the results of which can help guide policymakers on efficient and sustainable pumping approaches across users, aquifers, and time periods. A mathematical programming model is developed to economically analyze the 200 billion cubic meter Lotikipi Aquifer, discovered in 2013 in northern Kenya using modern remote sensing methods. While initial pumping of the Lotikipi Aquifer was halted due to high groundwater salinity levels, interest remains strong in assessing the economic capacity to pay for groundwater desalination because of its potential role in protecting regional food security generated by aquifer pumping for irrigation. The model is formulated by calibrating optimized pumping patterns in two existing freshwater aquifers to replicate observed historical pumping levels. Based on that exercise, a second model is developed to identify a least cost set of pumping restrictions that return each of three regional aquifers to starting conditions over a seven-year time period. A third model extends the second by adding a constraint of a minimum required level of food grain security supported by irrigation pumping from the aquifer system. Results show that the economic capacity to pay for aquifer desalination for irrigated agriculture lies in the range of $0.08 - $0.18 USD per cubic meter under current economic conditions and desalination technologies available. While this economic capacity to pay is lower than its current cost in most places, the future could be more optimistic. Advances in desalination technology, higher crop prices, technical advance in agriculture, and development of drought-resistant crops can all contribute to a future capacity to economically justify the expense of desalination.

Agricultural Systems Journal↗

USGS2016

Long-term lesser prairie-chicken nest ecology in response to grassland management

Long-term population and range declines from habitat loss and fragmentation caused the lesser prairie-chicken ( Tympanuchus pallidicinctus ) to be a species of concern throughout its range. Current lesser prairie-chicken range in New Mexico and Texas is partially restricted to sand shinnery oak ( Quercus havardii ; hereafter shinnery oak) prairies, on which cattle grazing is the main socioeconomic driver for private landowners. Cattle producers within shinnery oak prairies often focus land management on shrub eradication using the herbicide tebuthiuron to promote grass production for forage; however, herbicide application alone, and in combination with grazing, may affect nest site selection and nest survival of lesser prairie-chickens through the reduction of shinnery oak and native grasses. We used a controlled, paired, completely randomized design study to assess the influence of grazing and tebuthiuron application and their combined use on nest site selection and nest survival from 2001 to 2010 in Roosevelt County, New Mexico, USA at 2 spatial scales (i.e., treatment and microhabitat) in 4 treatments: tebuthiuron with grazing, tebuthiuron without grazing, no tebuthiuron with grazing, and a control of no tebuthiuron and no grazing. Grazing treatment was a short-duration system in which plots were grazed once during the dormant season and once during the growing season. Stocking rate was calculated each season based on measured forage production and applied to remove ≤25% of available herbaceous material per season. At the treatment scale, we compared nest site selection among treatments using 1-way χ 2 tests and nest survival among treatments using a priori candidate nest survival models in Program MARK. At the microhabitat scale, we identified important habitat predictors of nest site selection and nest survival using logistic regression and a priori candidate nest survival models in Program MARK, respectively. Females typically used treatments as expected and we did not detect trends in selection. Nest survival did not differ among treatments. At the microhabitat scale, nest sites had less bare ground ( P  = 0.001) and greater angles of obstruction ( P  ≤ 0.001) compared to random sites. There was a high degree of model selection uncertainty among our candidate models at the microhabitat scale and survival estimates were similar among habitat covariates. Results suggest a tebuthiuron application rate of 0.60 kg/ha, short-duration grazing, and a combination of these management techniques were not detrimental to lesser prairie-chicken nest site selection or nest survival. However, intensified management that increases bare ground or reduces overhead cover may negatively affect lesser prairie-chicken nesting habitat and nest survival.

Journal of Wildlife Management↗

USGS2025

How sampling design of GPS collar deployment influences consistency of mapped migration corridors over time

Federal and state agencies within the United States have recently issued directives prioritizing the conservation of ungulate migration corridors and winter ranges. The ability to identify and delineate the spatial distribution of seasonal ranges underpins these policies. While such delineations are often derived from global positioning system (GPS) collar data collected for a few years on a focal population, they are being used in long-term conservation planning. Our objectives were to quantify consistency in migration corridors from year to year and cumulatively across multiple years and identify which aspects of the sampling design of GPS collar deployment will delineate a consistent and relatively complete migration corridor. We used data from 6 sub-herds of mule deer ( Odocoileus hemionus ), a species known to have high migratory fidelity, located in Wyoming and northern New Mexico, USA, monitored for 5–7 years (510 unique individuals). We calculated 2 types of migration corridors over time: cumulative corridors where each new year of data was added to all previous years and yearly corridors where each year was based only on data collected in that year. We then calculated the year-to-year consistency in the 2 types of migration corridors by calculating the percent overlap between corridors calculated in sequential years. We found that collaring a higher proportion of a sub-herd increased the consistency in migration corridors, whereas collaring new individuals via redeployments in a subsequent year of monitoring caused corridors to shift. To obtain a corridor with ≥90% consistency (i.e., approaching the complete area used by a population in our data), our results suggest that biologists should strive to collar ≥6% of a sub-herd for a minimum of 2 years. However, if ≥6% of a sub-herd cannot be collared, monitoring for longer (3–4 years) will provide roughly 90% consistency in a migration corridor estimate for mule deer. Furthermore, adding 16–25% new individuals each year will help capture variation among individuals while maintaining corridor consistency of ≥90%, leading to a more accurate delineation of the corridor. Our results provide managers with a logistical framework for collaring projects aimed at delineating migration corridors that are durable into the future.

Colorado, New Mexico, Wyoming↗

USGS2023

Declining American Goshawk (Accipiter atricapillus) nest site habitat suitability in a timber production landscape: Effects of abiotic, biotic, and forest management factors

Conservation of the American Goshawk ( Accipiter atricapillus ; hereafter goshawk) has been contentious in relation to forest management. Higher quality goshawk nesting habitat is generally considered to consist of contiguous tracts of mature forest, due to goshawks' large home ranges, territoriality, and food requirements. The large trees of mature forest have the greatest economic value to timber companies. We used long-term (1965–2019) data from 281 goshawk nest site locations in the Black Hills National Forest (BHNF), South Dakota, and Wyoming, USA, to evaluate (1) abiotic and biotic factors associated with goshawk nest site habitat suitability (hereafter habitat suitability); (2) changes in habitat suitability over time; and (3) the effect of anthropogenic activities and natural disturbances on habitat suitability. We evaluated forest attributes across five spatial scales relevant to goshawks, used information-theoretic methods to rank and select models, and assessed the predictive capability of the best-approximating models using the concordance statistic. The best-approximating model had excellent predictive capability (concordance = 0.821). Forest attributes at the 12-ha scale were a better predictor of goshawk habitat suitability than covariates evaluated at the point or >12-ha scales, indicating the importance of managing goshawk habitat beyond the nest tree, but within the nest stand. Goshawk habitat suitability was positively related to mean percent canopy cover and median canopy base height, and negatively related to variability in canopy base height within 12 ha of the location. As mean percent canopy cover within 12 ha of a location increased, goshawk habitat suitability increased more slowly in burned compared to unburned areas. Commercial thinning treatments were more likely to occur in closed canopy forest that already had a higher likelihood of goshawk nesting, and we documented a positive relationship between habitat suitability and the interaction of canopy cover with commercial thinning. Goshawk habitat suitability was negatively related to slope and distance to drainage bottoms, and positively related to distance to ridges, which may be related to microclimatic factors. Our results indicate goshawk habitat suitability decreased across the BHNF over the past three decades and much high-quality nesting habitat was lost during this period due to a combination of unsustainable timber harvest and natural disturbances. Minimizing forest management activities that decrease canopy cover and canopy base height, and increase variability in canopy base height in areas of high- and medium-quality goshawk habitat are likely to slow the loss of higher-quality habitat and allow development of future nesting habitat. In addition to informing management, this study demonstrates the value of using existing long-term legacy datasets in conjunction with time series of remotely sensed habitat attributes to evaluate changes in habitat suitability for raptors in heavily managed landscapes with extensive natural disturbances.

South Dakota, Wyoming↗

USGS2005

Broad-scale predictors of canada lynx occurrence in eastern North America

The Canada lynx (Lynx canadensis) is listed as a threatened species throughout the southern extent of its geographic range in the United States. Most research on lynx has been conducted in the western United States and Canada; little is known about the ecology of lynx in eastern North America. To fill critical knowledge gaps about this species, we modeled and mapped lynx occurrence using habitat and weather data from 7 eastern states and 3 Canadian provinces. Annual snowfall, road density, bobcat (L. rufus) harvest, deciduous forest, and coniferous forest were compared at 1,150 lynx locations and 1,288 random locations. Nineteen a priori models were developed using the information-theoretic approach, and logistic regression models were ranked using Akaike's Information Criterion (AIC) and by our ability to correctly classify reserved data (Kappa). Annual snowfall and deciduous forest predicted lynx presence and absence for a reserved dataset (n = 278) with 94% accuracy. A map of the probability of lynx occurrence throughout the region revealed that 92% of the potential habitat (i.e., >50% probability of occurrence) was concentrated in a relatively contiguous complex encompassing northern Maine, New Brunswick, and the Gaspe?? peninsula of Quebec. Most of the remaining potential habitat (5%) was on northern Cape Breton Island in Nova Scotia. Potential habitat in New Hampshire, Vermont, and New York was small (1,252 km2), fragmented, and isolated (>200 km) from known lynx populations. When federally listed as threatened in the contiguous United States in 2000, inadequate regulations on federal lands were cited as the primary threat to Canada lynx. However, the majority of potential lynx habitat in the eastern United States is on private lands and continuous with potential habitat in Canada. Therefore, lynx conservation in eastern North America will need to develop partnerships across national, state, and provincial boundaries as well as with private landowners.

Journal of Wildlife Management↗

USGS2025

Component identification of solid biomass fuels using reflected light microscopy: Interlaboratory study 2

As nations transition toward sustainable energy systems , biomass has become a vital component of global energy portfolios. Derived from organic materials such as wood, agricultural residues, forestry byproducts, and organic waste, biomass is a renewable energy source with significant environmental and economic benefits. Responsible biomass energy production can improve waste management, reduce emissions of greenhouse gases, and mitigate environmental pollution. However, as the diversity of biomass-derived fuels increases, robust quality assessment methods are essential to ensure their efficiency, safety, and minimal environmental impact. Reflected light microscopy (RLM) is one such technique with the potential to complement conventional physico-chemical analyses by enabling a rapid identification of material constituents and impurities. To refine this methodology and evaluate the reproducibility of solid biomass component identification using RLM, an interlaboratory study (ILS) was conducted. The study involved the recognition of 58 components across 45 photomicrographs, with the participation of 65 scientists and students from 25 countries. The participants faced high difficulty identifying some of the marked components, and as a result, the percentage of correct answers ranged from 19.0 % to 98.3 %, with an average correct identification rate of 62.7 %. The most challenging aspects of the identification process included distinguishing between woody and non-woody (agro) biomass, accurately identifying petroleum-derived materials, and differentiating agro biomass from inorganic matter. The results suggest that while RLM is an important tool for characterizing solid biomass, further development of methodology guidelines and training are necessary to enhance its effectiveness. Future research should prioritize preparing detailed, image-rich, microscopic morphological descriptions of biomass fuel components, which could improve the accuracy and reliability of using RLM in biomass fuel characterization.

International Journal of Coal Geology↗

USGS2013

Diablotin Pterodroma hasitata : a biography of the endangered Black-capped Petrel

The Black-capped Petrel Pterodroma hasitata was believed extinct throughout much of the 20th century. It is the only gadfly petrel currently known to breed in the Caribbean Basin. Now seriously endangered, the species is presumed extirpated from Martinique, Dominica, and Guadeloupe, and breeding populations currently occur only on Hispaniola and perhaps Cuba. A related form (now considered a full species) once bred, but is now apparently extinct, on Jamaica. The Black-capped Petrel breeding population may number as few as 500 breeding pairs. Remaining populations suffer from multiple threats to terrestrial and pelagic habitats, including harvest by humans and predation by introduced mammals. The exact sizes, locations, and detailed chronologies of all Black-capped Petrel breeding sites remain poorly studied, although major colonies are today apparently restricted to steep sea and inland cliffs along the La Selle Ridge in Hispaniola. The largest known breeding population occurs in Haiti, although there is continued discussion about a possible breeding site in Cuba in the Sierra Maestra mountain range. Accounts from Cuba are based on the unverified assumption that birds observed at sea just offshore of that island are breeding locally. All evidence at present indicates that waters in or adjacent to the Florida Current and the Gulf Stream between north Florida and southern Virginia provide the primary foraging range of Black-capped Petrels. A small foraging area just off of southeast Cuba has also been reported, but the extent and seasonal use of this area are unknown. Concentrations of birds can be found along the Gulf Stream in southeastern US waters throughout the year, but are particularly common in May, August, and late December through early January. Concentrations of adult birds during winter, when peak breeding activity is underway, suggest that breeding birds forage along the Gulf Stream while commuting to and from breeding colonies. Such long-distance foraging is certainly possible for Pterodroma species. Potential threats to Black-capped Petrels include introduced predators, human encroachment on breeding and foraging habitats, and offshore oil, gas, and wind energy development. Increased mercury levels associated with petroleum production also pose a potential threat, as the Black-capped Petrel seems to be highly susceptible to mercury bioaccumulation compared with other pelagic species. In addition, fires and other bright light sources are known to attract Black-capped Petrels, making collisions with wires and other structures on lighted ships and platforms a potential concern. Haitian social-economic instability and increasing habitat loss suggest the likelihood of further population declines and increasing vulnerability of the species to extinction. Our findings are in accord with the recent decision by the US Fish and Wildlife Service (USFWS) to evaluate the need for additional protection of the species and the primary foraging habitat off the southeastern United States under the Endangered Species Act (USFWS 2012). Additional conservation measures and research strategies that warrant further consideration include (1) protection, monitoring, and management of known breeding populations and nesting habitat in the Dominican Republic and Haiti through controlling predators, installing artificial nest burrows in appropriate sites and hiring local wardens at breeding sites during the nesting season; (2) local and regional training, education and public awareness (e.g. Blanchard & Nettleship 1992); (3) restoration of the original common name Diablotin to common usage to promote the historical and cultural importance of this species; (4) studies to determine the distribution and genetic variability in the remaining populations; and (5) studies of satellite-tagged birds to assess their seasonal and geographic use of pelagic habitats.

Marine Ornithology: Journal of Seabird Research an↗

USGS1999

Behavioral responses to disturbance in freshwater mussels with implications for conservation and management

Knowledge about the ability of freshwater unionid mussels to recover from physical disturbance is important to their conservation and management. Threatened species may be disturbed by relocation to refugia as a conservation measure, and some species are disturbed by size- and species-selective harvesting of shells for use in the production of cultured pearls. The activity of freshwater unionid mussels generally decreases with water temperature, but intra- and interspecific differences in the frequency and distribution of recovery behaviors following disturbances at specific water temperatures have not been previously quantified. We observed righting, moving, and burrowing behavior of 4 mussel species, Amblema plicata plicata, Potamilus alatus, Fusconaia flava, and Lampsilis cardium, at 3 water temperatures (7, 14, and 21°C). The temporal frequency (intensity) and times-to-1st-event of behaviors were analyzed using proportional hazards models. Righting events and consecutive movements occurred at different intensities among temperatures and species. For righting, intensity increased by 8%/°C within the range of 7-21°C. Subsequent movements increased in intensity by 10%/°C. Amblema plicata was the slowest to respond, and had an intensity of turning upright only 27% of that for P. alatus. The intensities of movements for A. plicata and F. flava were 16% of those for P. alatus. Lampsilis cardium righted themselves most quickly, and had an intensity of righting 124% of that for P. alatus. The distribution of the 3 behaviors among treatment groups at 1 wk was analyzed with a proportional odds model. The distribution of righting, moving, and burrowing 1 wk after disturbance was described entirely by high-order interactions in our proportional odds model. Therefore, that model revealed little interpretable pattern in the endpoint data and it was less sensitive than our analysis of time-to-event data for measuring the effects of disturbance. We attributed the difference in sensitivity between the 2 models to the greater information content of time-until-event data. For similar studies of occurrences of key events, times to events should be recorded and interpreted whenever feasible and consistent with study objectives. Our results suggest that water temperature has an important effect on the outcome of mussel conservation projects and commercial harvesting activities. Our modeling approach, applied to other species, could help guide decisions about which species can safely be disturbed and the optimal seasonal timing of those disturbances.

Journal of the North American Benthological Societ↗

USGS2002

Variation in survivorship of a migratory songbird throughout its annual cycle

1. Demographic data from both breeding and non-breeding periods are needed to manage populations of migratory birds, many of which are declining in abundance and are of conservation concern. Although habitat associations, and to a lesser extent, reproductive biology, are known for many migratory species, few studies have measured survival rates of these birds at different parts of their annual cycle. 2. Cormack–Jolly–Seber models and Akaike’s information criterion model selection were used to investigate seasonal variation in survival of a Nearctic – Neotropical migrant songbird, the black-throated blue warbler, Dendroica caerulescens . Seasonal and annual survival were estimated from resightings of colour-ringed individuals on breeding grounds in New Hampshire, USA from 1986 to 2000 and on winter quarters in Jamaica, West Indies from 1986 to 1999. Warblers were studied each year during the May–August breeding period in New Hampshire and during the October–March overwinter period in Jamaica. 3. In New Hampshire, males had higher annual survival (0·51 ± 0·03) and recapture probabilities (0·93 ± 0·03) than did females (survival: 0·40 ± 0·04; recapture: 0·87 ± 0·06). In Jamaica, annual survival (0·43 ± 0·03) and recapture (0·95 ± 0·04) probabilities did not differ between sexes. Annual survival and recapture probabilities of young birds (i.e. yearlings in New Hampshire and hatch-year birds in Jamaica) did not differ from adults, indicating that from the time hatch-year individuals acquire territories on winter quarters in mid-October, they survive as well as adults within the same habitat. 4. Monthly survival probabilities during the summer (May–August) and winter (October–March) stationary periods were high: 1·0 for males in New Hampshire, and 0·99 ± 0·01 for males in Jamaica and for females in both locations. 5. These annual and seasonal survival estimates were used to calculate warbler survival for the migratory periods. Monthly survival probability during migration ranged from 0·77 to 0·81 ± 0·02. Thus, apparent mortality rates were at least 15 times higher during migration compared to that in the stationary periods, and more than 85% of apparent annual mortality of D. caerulescens occurred during migration. 6. Additional data from multiple species, especially measures of habitat-specific demography and dispersal, will improve our understanding of the relative impacts of the breeding, migratory, and winter periods on population dynamics of migratory birds and thus enhance future conservation efforts.

Journal of Animal Ecology↗

USGS2013

Phosphorus losses from agricultural watersheds in the Mississippi Delta

Phosphorus (P) loss from agricultural fields is of environmental concern because of its potential impact on water quality in streams and lakes. The Mississippi Delta has long been known for its fish productivity and recreational value, but high levels of P in fresh water can lead to algal blooms that have many detrimental effects on natural ecosystems. Algal blooms interfere with recreational and aesthetic water use. However, few studies have evaluated P losses from agricultural watersheds in the Mississippi Delta. To better understand the processes influencing P loss, rainfall, surface runoff, sediment, ortho-P (orthophosphate, PO 4 –P), and total P (TP) were measured (water years 1996–2000) for two subwatersheds (UL1 and UL2) of the Deep Hollow Lake Watershed and one subwatershed of the Beasley Lake Watershed (BL3) primarily in cotton production in the Mississippi Delta. Ortho-P concentrations ranged from 0.01 to 1.0 mg/L with a mean of 0.17 mg/L at UL1 (17.0 ha), 0.36 mg/L at UL2 (11.2 ha) and 0.12 mg/L at BL3 (7.2 ha). The TP concentrations ranged from 0.14 to 7.9 mg/L with a mean of 0.96 mg/L at UL1, 1.1 mg/L at UL2 and 1.29 mg/L at BL3. Among the three sites, UL1 and UL2 received P application in October 1998, and BL3 received P applications in the spring of 1998 and 1999. At UL1, ortho-P concentrations were 0.36, 0.25 and 0.16 for the first, second and third rainfall events after P application, respectively; At UL2, ortho-P concentrations were 1.0, 0.66 and 0.65 for the first, second and third rainfall events after P application, respectively; and at BL3, ortho-P concentrations were 0.11, 0.22 and 0.09 for the first, second and third rainfall events after P application, respectively. P fertilizer application did influence P losses, but high P concentrations observed in surface runoff were not always a direct result of P fertilizer application or high rainfall. Application of P in the fall (UL1 and UL2) resulted in more ortho-P losses, likely because high rainfall often occurred in the winter months soon after application. The mean ortho-P concentrations were higher at UL1 and UL2 than those at BL3, although BL3 received more P application during the monitoring period, because P was applied in spring at BL3. However, tillage associated with planting and incorporating applied P in the spring (BL3) may have resulted in more TP loss in sediment, thus the mean TP concentration was the highest at BL3. Ortho-P loss was correlated with surface runoff; and TP loss was correlated with sediment loss. These results indicate that applying P fertilizer in the spring may be recommended to reduce potential ortho-P loss during the fallow winter season; in addition, conservation practices may reduce potential TP loss associated with soil loss.

Mississippi↗

USGS2012

Assessment of salinity intrusion in the James and Chickahominy Rivers as a result of simulated sea-level rise in Chesapeake Bay, East Coast, USA

Global sea level is rising, and the relative rate in the Chesapeake Bay region of the East Coast of the United States is greater than the worldwide rate. Sea-level rise can cause saline water to migrate upstream in estuaries and rivers, threatening freshwater habitat and drinking-water supplies. The effects of future sea-level rise on two tributaries of Chesapeake Bay, the James and Chickahominy (CHK) Rivers, were evaluated in order to quantify the salinity change with respect to the magnitude of sea-level rise. Such changes are critical to: 1) local floral and faunal habitats that have limited tolerance ranges to salinity; and 2) a drinking-water supply for the City of Newport News, Virginia. By using the three-dimensional Hydrodynamic-Eutrophication Model (HEM-3D), sea-level rise scenarios of 30, 50, and 100 cm, based on the U.S. Climate Change Science Program for the mid-Atlantic region for the 21st century, were evaluated. The model results indicate that salinity increases in the entire river as sea level rises and that the salinity increase in a dry year is greater than that in a typical year. In the James River, the salinity increase in the middle-to-upper river (from 25 to 50 km upstream of the mouth) is larger than that in the lower and upper parts of the river. The maximum mean salinity increase would be 2 and 4 ppt for a sea-level rise of 50 and 100 cm, respectively. The upstream movement of the 10 ppt isohaline is much larger than the 5 and 20 ppt isohalines. The volume of water with salinity between 10 and 20 ppt would increase greatly if sea level rises 100 cm. In the CHK River, with a sea-level rise of 100 cm, the mean salinity at the drinking-water intake 34 km upstream of the mouth would be about 3 ppt in a typical year and greater than 5 ppt in a dry year, both far in excess of the U.S. Environmental Protection Agency's secondary standard for total dissolved solids for drinking water. At the drinking-water intake, the number of days of salinity greater than 0.1 ppt increases with increasing sea-level rise; during a dry year, 0.1 ppt would be exceeded for more than 100 days with as small a rise as 30 cm.

Newport News↗

USGS2018

Greater sage-grouse vital rates after wildfire

Greater sage-grouse ( Centrocercus urophasianus ) have been subject to long-term and continuing declines in population and habitat since European settlement of western North America. Increased wildfire activity constitutes a primary threat to the species in western portions of their range, with documented declines in wildfire-affected populations. Following a 187,000-ha wildfire in southeastern Oregon and northern Nevada, USA, we used global positioning system (GPS) telemetry to monitor nest initiation, nest survival, nesting habitat, and adult survival of female sage-grouse during 2013 and 2014. We used known-fate models in Program MARK to estimate daily nest survival and monthly adult survival in relation to temporal patterns, physiological characteristics of females, and habitat and land-cover characteristics. We assessed habitat characteristics using geographic information system (GIS)-derived measures of post-fire habitat condition and land cover. Nest initiation rate following the fire was comparable to that observed in unaltered habitat. We observed nesting rates of 90% and 100% during 2013 and 2014, respectively, and renesting rates of 23% and 57% during the same years. Daily nest survival was consistently low in comparison to rates observed in concurrent studies in the region, for first nests during both years, and for second nests during 2013, but survival markedly increased for second nests during 2014. Sage-grouse generally did not leave the fire perimeter to nest, with 64% and 73% of nests located in the fire boundary during 2013 and 2014, respectively. Approximately 27% of nests were located in burned habitat during 2013, and 20% of nests in 2014 were located in burned habitat. Adult survival varied by month, and although patterns of monthly survival were similar between years, monthly survival rates were significantly reduced from the beginning of the study through the end of the first post-fire growing season. Our results indicate that sage-grouse continue to use fire-affected habitat in the years immediately following wildfire and sage-grouse experienced lower nest survival and adult female survival than other populations during the same period.

Oregon↗

USGS2019

Evidence of limited recruitment of Pallid Sturgeon in the Lower Missouri River

Pallid Sturgeon Scaphirhynchus albus are endemic to the Missouri and Mississippi river basins and are rare throughout their range. The species was listed as federally endangered with little to no evidence of natural recruitment. Since population augmentation was initiated as a recovery objective in the early 1990s, thousands of hatchery-origin Pallid Sturgeon have been stocked in the lower Missouri River (Gavins Point Dam [river kilometer 1,305.1] to the confluence of the Mississippi River [river kilometer 0.0]). Efforts to discriminate natural reproduction and recruitment of wild-origin Pallid Sturgeon from hatchery-origin fish has been hampered by tag loss in hatchery-origin sturgeon, inconsistent documentation of hatchery parental crosses, and the failure to collect tissue samples for genotyping all broodstock. However, the recent reconstruction of missing parental genotypes from known hatchery-origin progeny and from cryopreserved milt made it possible to examine Pallid Sturgeon recruitment. Therefore, our objectives were to 1) determine the likelihood that unmarked Pallid Sturgeon captured from the lower Missouri River were the result of natural recruitment and 2) examine the length distribution of wild- and hatchery-origin fish to determine if a difference exists by origin and examine the life-stage distribution. Genetic analysis showed that from 2003 to 2015, 358 “presumptive wild-origin” Pallid Sturgeon were captured in the lower Missouri River and the comparison between the length distributions of wild- and hatchery-origin fish did not provide any additional clarification into potential wild-origin fish. Low recruitment may be due to a small breeding population, high mortality of early life stages, hybridization with Shovelnose Sturgeon Scaphirhynchus platorynchus , or transport of drifting free embryos or larvae into inhospitable habitats. Determining what factors are limiting recruitment is the important next step for the recovery of Pallid Sturgeon in the lower Missouri River.

Iowa, Kansas, Missouri, Nebraska, South Dakota↗