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At least 955 records · Page 53Linked to original sources
USGS2010

Fort Collins Science Center- Policy Analysis and Science Assistance Branch : Integrating social, behavioral, economic and biological sciences

The Fort Collins Science Center's Policy Analysis and Science Assistance (PASA) Branch is a team of approximately 22 scientists, technicians, and graduate student researchers. PASA provides unique capabilities in the U.S. Geological Survey by leading projects that integrate social, behavioral, economic, and biological analyses in the context of human-natural resource interactions. Resource planners, managers, and policymakers in the U.S. Departments of the Interior (DOI) and Agriculture (USDA), State and local agencies, as well as international agencies use information from PASA studies to make informed natural resource management and policy decisions. PASA scientists' primary functions are to conduct both theoretical and applied social science research, provide technical assistance, and offer training to advance performance in policy relevant research areas. Management and research issues associated with human-resource interactions typically occur in a unique context, involve difficult to access populations, require knowledge of both natural/biological science in addition to social science, and require the skill to integrate multiple science disciplines. In response to these difficult contexts, PASA researchers apply traditional and state-of-the-art social science methods drawing from the fields of sociology, demography, economics, political science, communications, social-psychology, and applied industrial organization psychology. Social science methods work in concert with our rangeland/agricultural management, wildlife, ecology, and biology capabilities. The goal of PASA's research is to enhance natural resource management, agency functions, policies, and decision-making. Our research is organized into four broad areas of study.

Fact Sheet↗
USGS2021

Sediment mobility and river corridor assessment for a 140-kilometer segment of the main-stem Klamath River below Iron Gate Dam, California

This river corridor assessment documents sediment mobility and river response to flood disturbance along a 140-kilometer segment of the main-stem Klamath River below Iron Gate Dam, California. Field and remote sensing methods were used to assess fundamental indicators of active sediment transport and river response to a combination of natural runoff events and reservoir releases during the study period from 2005 to 2019. Discharge measurements at two gaged sites and bed-material samples at two ungaged sites provided direct and indirect evidence of mobile bed conditions, scour and fill, and surface flushing of fine sediment. Available remote-sensing datasets collected in 2005, 2009, 2010, and 2016 were used to determine sediment storage, flood inundation boundaries, and provide indirect evidence of flood-induced scour. These datasets validate channel-maintenance flows defined by Shea and others (2016). During the study period, flows greater than or equal to 6,030 cubic feet per second mobilized the substrate, caused localized scour, and flushed fine sediment from bar surfaces. Flows greater than or equal to 10,400 cubic feet per second stripped vegetation from bars and floodplains and produced deeper scour. Flood disturbance within the study reach is produced by the combined effect of natural flows and reservoir releases, which resulted in mobile bed conditions during the study period. Periodic scour and substrate disturbance are considered by the U.S. Fish and Wildlife Service to be integral for managing disease-induced mortality of juvenile and adult salmonids. Substrate conditions conducive to parasites that host infectious diseases, particularly Ceratonova shasta, occur periodically. Additional studies are required to determine whether disease prevalence can be mitigated by well-timed reservoir releases. Study results are useful for interpreting linkages among physical and biological processes and for evaluating the effectiveness of flow management targeted to improve river bed conditions for endangered salmonid populations.

California↗
USGS2010

Effects of wastewater effluent discharge and treatment facility upgrades on environmental and biological conditions of the upper Blue River, Johnson County, Kansas and Jackson County, Missouri, January 2003 through March 2009

The Johnson County Blue River Main Wastewater Treatment Facility discharges into the upper Blue River near the border between Johnson County, Kansas and Jackson County, Missouri. During 2005 through 2007 the wastewater treatment facility underwent upgrades to increase capacity and include biological nutrient removal. The effects of wastewater effluent on environmental and biological conditions of the upper Blue River were assessed by comparing an upstream site to two sites located downstream from the wastewater treatment facility. Environmental conditions were evaluated using previously and newly collected discrete and continuous data, and were compared with an assessment of biological community composition and ecosystem function along the upstream-downstream gradient. This evaluation is useful for understanding the potential effects of wastewater effluent on water quality, biological community structure, and ecosystem function. In addition, this information can be used to help achieve National Pollution Discharge Elimination System (NPDES) wastewater effluent permit requirements after additional studies are conducted. The effects of wastewater effluent on the water-quality conditions of the upper Blue River were most evident during below-normal and normal streamflows (about 75 percent of the time), when wastewater effluent contributed more than 20 percent to total streamflow. The largest difference in water-quality conditions between the upstream and downstream sites was in nutrient concentrations. Total and inorganic nutrient concentrations at the downstream sites during below-normal and normal streamflows were 4 to 15 times larger than at the upstream site, even after upgrades to the wastewater treatment facility were completed. However, total nitrogen concentrations decreased in wastewater effluent and at the downstream site following wastewater treatment facility upgrades. Similar decreases in total phosphorus were not observed, likely because the biological phosphorus removal process was not optimized until after the study was completed. Total nitrogen and phosphorus from the wastewater treatment facility contributed a relatively small percentage (14 to 15 percent) to the annual nutrient load in the upper Blue River, but contributed substantially (as much as 75 percent) to monthly loads during seasonal low-flows in winter and summer. During 2007 and 2008, annual discharge from the wastewater treatment facility was about one-half maximum capacity, and estimated potential maximum annual loads were 1.6 to 2.4 times greater than annual loads before capacity upgrades. Even when target nutrient concentrations are met, annual nutrient loads will increase when the wastewater treatment facility is operated at full capacity. Regardless of changes in annual nutrient loads, the reduction of nutrient concentrations in the Blue River Main wastewater effluent will help prevent further degradation of the upper Blue River. The Blue River Main Wastewater Treatment Facility wastewater effluent caused changes in concentrations of several water-quality constituents that may affect biological community structure and function including larger concentrations of bioavailable nutrients (nitrate and orthophosphorus) and smaller turbidities. Streambed-sediment conditions were similar along the upstream-downstream gradient and measured constituents did not exceed probable effect concentrations. Habitat conditions declined along the upstream-downstream gradient, largely because of decreased canopy cover and riparian buffer width and increased riffle-substrate fouling. Algal biomass, primary production, and the abundance of nutrient-tolerant diatoms substantially increased downstream from the wastewater treatment facility. Likewise, the abundance of intolerant macroinvertebrate taxa and Kansas Department of Health and Environment aquatic-life-support scores, derived from macroinvertebrate data, significantly decreased downstream from the wastewater treatment facility. Ecosystem functional health, evaluated using a preliminary framework based on primary production and community respiration, downstream from the wastewater treatment facility was mildly impaired relative to the upstream site during summer 2008 but not during other times of the year. Upgrades to the Blue River Main Wastewater Treatment Facility improved wastewater effluent quality, but the wastewater effluent discharge still had negative effects on the water quality and biological conditions at the downstream sites. Wastewater effluent discharge into the upper Blue River likely contributed to changes in measures of ecosystem structure (streamflow, water chemistry, algal biomass, algal periphyton and macroinvertebrate community composition) and primary production, a measure of ecosystem function, along the upstream-downstream gradient. Because the Blue River Main Wastewater Treatment Facility is located in a rapidly urbanizing area, urbanization effects also may play a role in the decline in environmental and biological conditions along the upstream-downstream gradient. Despite these differences in environmental and biological conditions, ecosystem functional health was not impaired downstream from the WWTF during most times of the year, indicating the declines in environmental and biological conditions along the upstream-downstream gradient were not substantial enough to cause persistent changes in ecosystem function.

Kansas, Missouri↗
USGS1987

Bird behavior and mortality in relation to power lines in prairie habitats

Research was conducted to determine the magnitude of avian mortality caused by power transmission lines in prairie habitats during the two spring and two fall migration periods between July 1980 and May 1982. Searches for dead birds were made at least twice weekly during each migration period. Study sites were selected to include 'worst-case' situations involving potentially large concentrations of birds.In total, 633 dead birds were found beneath 9.6 km of power lines. About 81% of the birds were found during fall migration. Removal of birds by scavengers was of minor, although local, importance, and observer error in finding birds was greatest in areas of dense vegetation. Total kill was estimated at 1,332 birds.Data were gathered on more than 7,000 bird flights observed in the vicinity of the power lines. Sixty-eight percent of the birds did not respond to the presence of the power lines. Flaring and climbing over the conductor or overhead ground wire occurred in about 25% of the flights. One hundred nine birds in 82 flocks were observed to collide with a power line. Of these birds, 87% flared to climb over the power line before colliding. The overhead ground wire was responsible for most deaths, as 102 of 109 birds collided with it.Whereas none of the mortality observed was considered to be biologically significant at the particular sites examined, the cumulative effect of mortality sustained from collisions with power lines may be important, particularly to populations of rare or endangered birds.

Technical Report↗
USGS2023

Natives bite back: Depredation and mortality of invasive juvenile Burmese pythons (Python bivittatus) in the Greater Everglades Ecosystem

Burmese pythons (Python bivittatus Kuhl, 1820) are one of the world’s largest snake species, making them a highly successful and biologically damaging invasive predator in the Greater Everglades Ecosystem, Florida, USA. Though we have knowledge of python diet within this system, we understand very little of other interactions with native species. Effects native species have on invasive pythons, especially in the juvenile size class, are of particular interest as the prevalence of mortalities would inform potential population growth and trophic dynamics with native prey species. Native ophiophagous predators in Florida feed on smaller native snake species and it is unknown if they consistently recognize similarly sized juvenile invasive pythons as prey items. Using radiotelemetry, we found at least four native species within Big Cypress National Preserve that were implicated in juvenile python deaths, including three Florida cottonmouths (Agkistrodon conanti Gloyd, 1969), five American alligators (Alligator mississippiensis Daudin, 1802), one hispid cotton rat (Sigmodon hispidus Say and Ord, 1825), and three mesomammals. One mortality was the result of an attempt to subdue a prey item 106% the size of the python, constituting the largest predator:prey size ratio ever reported in this size class. This finding may indicate that phenotypic variation in individual juvenile pythons includes behavior that could be maladaptive within the novel Florida environment. Here we describe some of the first confirmed cases of non-anthropogenic mortality in juvenile Burmese pythons in Florida and present evidence that invasive pythons in this size class are now being incorporated into the diets of native species in its invasive range Burmese pythons (Python bivittatus Kuhl, 1820) are one of the world’s largest snake species, making them a highly successful and biologically damaging invasive predator in the Greater Everglades Ecosystem, Florida, USA. Though we have knowledge of python diet within this system, we understand very little of other interactions with native species. Effects native species have on invasive pythons, especially in the juvenile size class, are of particular interest as the prevalence of mortalities would inform potential population growth and trophic dynamics with native prey species. Native ophiophagous predators in Florida feed on smaller native snake species and it is unknown if they consistently recognize similarly sized juvenile invasive pythons as prey items. Using radiotelemetry, we found at least four native species within Big Cypress National Preserve that were implicated in juvenile python deaths, including three Florida cottonmouths (Agkistrodon conanti Gloyd, 1969), five American alligators (Alligator mississippiensis Daudin, 1802), one hispid cotton rat (Sigmodon hispidus Say and Ord, 1825), and three mesomammals. One mortality was the result of an attempt to subdue a prey item 106% the size of the python, constituting the largest predator:prey size ratio ever reported in this size class. This finding may indicate that phenotypic variation in individual juvenile pythons includes behavior that could be maladaptive within the novel Florida environment. Here we describe some of the first confirmed cases of non-anthropogenic mortality in juvenile Burmese pythons in Florida and present evidence that invasive pythons in this size class are now being incorporated into the diets of native species in its invasive range.

Florida↗
USGS2021

Statistical methods for simulating structural stormwater runoff best management practices (BMPs) with the Stochastic Empirical Loading and Dilution Model (SELDM)

This report documents statistics for simulating structural stormwater runoff best management practices (BMPs) with the Stochastic Empirical Loading and Dilution Model (SELDM). The U.S. Geological Survey developed SELDM and the statistics documented in this report in cooperation with the Federal Highway Administration to indicate the risk for stormwater flows, concentrations, and loads to exceed user-selected water-quality goals and the potential effectiveness of mitigation measures to reduce such risks. In SELDM, three treatment variables—hydrograph extension, volume reduction, and water-quality treatment—are simulated by using the trapezoidal distribution and the rank correlation with the associated runoff variables. This report describes methods for calculating the trapezoidal distribution statistics and rank correlation coefficients for these treatment variables and methods for estimating the minimum irreducible concentration (MIC), which is the lowest expected effluent concentration from a BMP site or a category of BMPs. These statistics are different from the statistics commonly used to characterize or compare BMPs; they are designed to provide a stochastic transfer function to approximate the quantity, duration, and quality of BMP effluent given the associated inflow values for a population of storm events. Analyses for this study were done with data extracted from a modified copy of the December 2019 version of the International Stormwater Best Management Practices Database. Statistics for volume reduction, hydrograph extension, and water-quality treatment were developed with selected data. The medians of the best-fit statistics for selected constituents were used to construct generalized cumulative distribution functions for the three treatment variables. For volume reduction and hydrograph extension, selection of a Spearman’s rank correlation coefficient (rho) value that is the average of the median and maximum values for the BMP category may help generate realistic simulation results in SELDM. The median rho value may be selected to help generate realistic simulation results for water-quality treatment variables. Water-quality treatment statistics, including trapezoidal ratios and MIC values, were developed for 51 runoff-quality constituents commonly measured in highway and urban runoff studies. Statistics were calculated for water-quality properties, sediment and solids, nutrients, major and trace inorganic elements, organic compounds, and biologic constituents. Analysis of MIC values provides information to guide professional judgement for selecting values for simulating water quality at sites of interest. The MIC is a lower bound for BMP discharge concentrations and will therefore replace simulated BMP discharge concentrations below the selected value. A new method for estimating MIC values, the lognormal variate of inflow concentrations, was developed in this report and these statistics were calculated for individual constituents and constituent categories. Inflow quality is correlated to MIC values for some constituents, but regional soil concentrations were not strongly correlated to MIC values.

Scientific Investigations Report↗
USGS2022

Contaminants of emerging concern in the Great Lakes: Science to inform management practices for protecting the health and integrity of wildlife populations from adverse effects: GLRI action plan I, focus area 1, goal 5

Executive Summary: Under Action Plan I (2010-2014) of the Great Lakes Restoration Initiative (GLRI), Federal and Academic partners began an investigation of the presence and distribution of contaminants of emerging concern (CECs) in the Great Lakes and potential impacts on fish and wildlife. The term CECs is applied to a broad range of chemicals that are currently in use but for which we currently lack good understanding of whether fish, wildlife, or humans are being exposed and/or whether negative health or environmental effects are expected if exposure occurs. Pharmaceuticals, personal care products, flame retardants, many current use pesticides, and poly- and perfluorinated chemicals are some well-known groups of CECs, but there is no definitive or comprehensive list that can be used to support the management of CECs to reduce impacts on the Great Lakes ecosystem. Four overarching goals were identified for this collaborative investigation: 1. Evaluate the sources, occurrence, and distribution of CECs across the Great Lakes Basin. 2. Examine associations between the distribution of CECs and land-use patterns. 3. Review both scientific literature and field-generated data to determine the potential for CECs to cause adverse effects on Great Lakes fish and wildlife populations. 4. Develop efficient strategies to survey and/or monitor for threats that CECs may pose in order to take effective management actions before those threats evolve into large scale impacts on Great Lakes ecosystems or the services they provide. Achievement of these goals ensures progress towards Focus Area 1: Toxic Substances and Areas of Concern from GLRI Action Plan I, Goal 5: “ The health and integrity of wildlife populations and habitat are protected from adverse chemical and biological effects associated with the presence of toxic substances in the Great Lakes Basin ”. This large-scale research effort was comprised of individual and collaborative projects from multiple federal agencies and academic institutions, involving over 85 investigators, and overseen by the U.S. Environmental Protection Agency (EPA) Region 5, Great Lakes National Program Office. Partners include the United States Geological Survey, the National Oceanic and Atmospheric Administration, U.S. Fish and Wildlife Service, Saint Cloud State University, the U.S. EPA Office of Research and Development, and the U.S. Army Corps of Engineers. Key findings: 1. Contaminants of emerging concern were found throughout the monitored Great Lakes tributaries, but types and concentrations vary in association with regional land use. CECs were detected in nearly all samples collected. The type and concentration of the specific contaminants detected varied considerably among field sites and in association with land use type, such as urban, agricultural, wetland, 2 or forest. Contaminants were detected in the water column, sediment, and tissues of all species surveyed in the current work (mussels, aquatic insects, fish, and insect-eating birds). 2. There were over 20 contaminants for which CEC concentrations approached or exceeded those reported to cause toxicity in laboratory experiments. This was based on detection in water, sediments and or biota at one or more field sites. These contaminants represent compounds that warrant further investigation and monitoring with respect to potential impacts in certain areas of the Great Lakes basin. Based on the present investigation, compounds of greatest concern include: polycyclic aromatic hydrocarbons, associated with oil-based products and combustion of organic matter; atrazine, an herbicide; dichlorvos, an insecticide; and ibuprofen and venlafaxine, both pharmaceuticals. 3. Results suggest that mixtures of CECs presently found in most Great Lakes tributary locations surveyed may elicit subtle biological effects, but likely are not, alone, causing obvious detriment to current communities of fish and wildlife. CECs detected in the Great Lakes were associated with subtle biological effects like changes in gene expression, altered circulating glucose, etc. in both wild-caught and laboratory-reared organisms. These effects were generally not indicative of reproductive failure or mortality. However, the effects may have more serious implications when combined with other sources of stress like habitat degradation, changing climate conditions, and competition with invasive species. Due to limited historical data, it is unknown whether severe CEC-related impacts have already affected aquatic communities in waterbodies that have received long-term inputs of these contaminants. Likewise, under Action Plan I, biological effects were not necessarily evaluated at the sites where CEC concentrations exceeding laboratory toxicity thresholds were detected. As a result, strategic, ongoing surveillance and monitoring of CECs is warranted. This collaborative investigation resulted in new tools, approaches, and data that can be used to inform and support the management of CECs to reduce their impacts on Great Lakes natural resources. The following products of this research effort are available through https://communities.geoplatform.gov/glri/ or by contacting the investigators (see technical chapters found in Appendices A-F): 1. Database of CEC occurrence and concentrations in US tributary streams. The database includes CEC detections in water, sediment, and fish and wildlife tissues, and represents the most comprehensive survey of CECs in the Great Lakes Region. 2. Synopses of results and key findings. Integrated summaries of results, conclusions, and management implications of the CEC research are available through reports, topical fact sheets, and presentations. 3. Technical publications: This collaborative research effort has resulted in over 50 peer-reviewed publications, agency reports, and data releases that can be of use to resource managers, the scientific community, and members of the public. 4. Innovative tools. Innovative monitoring devices, sampling equipment, conceptual frameworks, and software applications were developed over the course of this 3 research. These tools are transferable to stakeholders via internet accessibility or via specifications, instructions, and demonstration detailed in technical publications. Hypotheses to guide CECs research under Action Plan II. Findings from 2010-2014 were used to guide further research in 2015-2018 for basin-wide surveillance of CECs and for sites warranting further study of potential biological impacts of CECs. Additional surveillance included both evaluation of additional classes of contaminants and expanded lists for chemical classes shown to be of greatest concern. Mixtures of some of the most frequently detected contaminants were also tested in laboratory studies to understand whether long term exposures to multiple contaminants may result in effects not evident from uncontrolled, short-term field experiments.

Great Lakes↗
USGS2025

Triple-oxygen isotopic evidence of prolonged direct bioleaching of pyrite with O2

Sulfate is often touted as containing atmospheric oxygen whose isotopic signature can constrain redox, environmental conditions, and biological activity. Yet, the amount and isotopic fractionation associated with air-O 2 incorporation during sulfate formation is still debated, making its verification difficult. In this study, we identify a distinct, microbially dominated environment with the potential to preserve maximum signals of air-O 2 in sulfate. We report triple-oxygen isotope data for sulfate produced from pyrite oxidation in microbial and abiotic experiments, and from natural dissolved sulfate from the Rio Tinto, Spain, an acid mine drainage site. The oxygen isotope systematics of sulfate in these environments define a unique kinetic isotope effect associated with initial stage pyrite oxidation by Acidithiobacillus ferrooxidans that preserves >80 % oxygen from air-O 2 in sulfate. Unlike experiments, which evolve toward water-oxygen dominated sulfate on short time scales, Rio Tinto, Spain hosts a microbe rich environment with distinct geochemistry that maintains high O 2 -oxygen in sulfate. Therefore, in addition to containing isotopic records from water and air, sulfates can also contain a biosignature that is promising for understanding conditions on Mars and early Earth.

Earth and Planetary Science Letters↗
USGS2020

Limitations, lack of standardization, and recommended best practices in studies of renewable energy effects on birds and bats

Increasing global energy demand is fostering the development of renewable energy as an alternative to fossil fuels. However, renewable energy facilities may adversely affect wildlife. Facility siting guidelines recommend or require project developers complete pre‐ and postconstruction wildlife surveys to predict risk and estimate effects of proposed projects. Despite this, there are no published studies that have quantified the types of surveys used or how survey types are standardized within and across facilities. We evaluated 628 peer‐reviewed publications, unpublished reports, and citations, and we analyzed data from 525 of these sources (203 facilities: 193 wind and 10 solar) in the United States and Canada to determine the frequency of pre‐ and postconstruction surveys and whether that frequency changed over time; frequency of studies explicitly designed to allow before‐after or impact‐control analyses; and what types of survey data were collected during pre‐ and postconstruction periods and how those data types were standardized across periods and among facilities. Within our data set, postconstruction monitoring for wildlife fatalities and habitat use was a standard practice ( n = 446 reports), but preconstruction estimation of baseline wildlife habitat use and mortality was less frequently reported ( n = 84). Only 22% ( n = 45) of the 203 facilities provided data from both pre‐ and postconstruction, and 29% ( n = 59) had experimental study designs. Of 108 facilities at which habitat‐use surveys were conducted, only 3% estimated of detection probability. Thus, the available data generally preclude comparison of biological data across construction periods and among facilities. Use of experimental study designs and following similar field protocols would improve the knowledge of how renewable energy affects wildlife.

Conservation Biology↗
USGS1977

Analysis of street sweepings, Portland, Oregon

A brief study involving collection and analysis of street sweepings was undertaken to provide the U.S. Army Corps of Engineers with data on physical, chemical, and biological characteristics of dust and dirt accumulating on Portland streets. Most of the analyses selected were based on the pollutant loads predicted by the Storage, Treatment, Overflow, and Runoff Model (STORM). Five different basins were selected for sampling, and samples were collected three times in each basin. Because the literature reports no methodology for analysis of dust and dirt, the analytical methodology is described in detail. Results of the analyses are summarized in table 1.

Oregon↗
USGS1979

Hydrologic data from urban watersheds in the Tampa Bay area, Florida

Hydrologic data are being collected in 10 urbanized watersheds located in the Tampa Bay area, Florida. The gaged watersheds have impervious areas that range from 19 percent for a residential watershed in north Tampa to nearly 100 percent for a downtown Tampa watershed. Land-use types, including roads, residential, commercial, industrial, institutional, recreational , and open space, have been determined for each watershed. Rainfall and storm runoff data collected since 1971 for one site and since 1975 for six other sites through September 1976, have been processed. These data are recorded at 5-minute intervals and are stored in the U. S. Geological Survey WATSTORE unit values file. Daily rainfall at 12 sites and daily pan evaporation at one site have been stored in the WATSTORE daily values file. Chemical and biological analyses of storm runoff for six sites, base flow for seven sites, and analyses of bottom material for seven sites are also stored in the WATSTORE water-quality files. Rainfall and storm runoff for selected storms, daily rainfall, and daily pan-evaporation data are summarized in this report. Water-quality analyses of all water-quality samples also are listed. (Woodard-USGS).

Florida↗
USGS2013

Adaptive harvest management for the Svalbard population of pink-footed geese: briefing summary

The African-Eurasian Waterbird Agreement (AEWA; http://www.unep-aewa.org/) calls for means to manage populations which cause conflicts with certain human economic activities. The Svalbard population of the pink-footed goose has been selected as the first test case for such an international species management plan to be developed. This document describes progress to date on the development of an adaptive harvest management (AHM) strategy for maintaining pink-footed goose abundance near their target level by providing for sustainable harvasts in Norway and Denmark. This briefing supplements material provided in the Progress Summary distributed to the International Working Group on February 1, 2013. We emphasize that peer review is an essential aspect of the process of developing and implementing an AHM program for pink-footed geese, and we will continue to solicit reviews by the International Working Group and their staff, as well as scientists not engaged in this effort. We wish to make the Working Group aware the the following two manuscripts have been submitted recently to refereed journals and are available upon request from the senior authors: Jensen, G.H., J. Madsen, F.A. Johnson, and M. Tamstorf. Snow conditions as an estimator of the breeding output in high-Arctic pink-footed geese Anser brachyrhynchus. Polar Biology: In review. Johnson, F.A., G.H. Jensen, J. Madsen, and B.K. Williams. Uncertainity, robustness, and the value of information in managing an expanding Arctic goose population. Ecological Modeling: In review. In addition to these manuscripts, the Progress Summary (February 1, 2013), and this Briefing Summary (April 23, 2013) an annual report will be produced in August 2013 and every summer thereafter. Additional manuscripts for journal publication are also anticipated.

Report↗
USGS2015

Characterizing and simulating sediment loads and transport in the lower part of the San Antonio River Basin

This extended abstract is based on the U.S. Geological Survey Scientific Investigations Reports by Crow et al. (2013) and Banta and Ockerman (2014). Suspended sediment in rivers and streams can play an important role in ecological health of rivers and estuaries and consequently is an important issue for water-resource managers. The quantity and type of suspended sediment can affect the biological communities (Wood and Armitage, 1997), the concentration and movement of natural constituents and anthropogenic contaminants (Moran and others, 2012), and the amount of sediment deposition in coastal environments (Milliman and Meade, 1983). To better understand suspended-sediment characteristics in the San Antonio River Basin, the U.S. Geological Survey (USGS), in cooperation with the San Antonio River Authority and Texas Water Development Board, conducted a two-phase study to (1) collect and analyze sediment data to characterize sediment conditions in the San Antonio River downstream of San Antonio, Texas, and (2) develop and calibrate a watershed model to simulate hydrologic conditions and suspended-sediment loads for four watersheds in the San Antonio River Basin, downstream from San Antonio, Texas.

Texas↗
USGS2016

Fisheries research and monitoring activities of the Lake Erie Biological Station, 2015

In 2015, the U.S. Geological Survey’s (USGS) Lake Erie Biological Station (LEBS) successfully completed large vessel surveys in all three of Lake Erie’s basins. Lake Erie Biological Station’s primary vessel surveys included the Western Basin Forage Fish Assessment and East Harbor Fish Community Assessment as well as contributing to the cooperative multi-agency Central Basin Hydroacoustics Assessment, the Eastern Basin Coldwater Community Assessment, and Lower Trophic Level Assessment (see Forage and Coldwater Task Group reports). In 2015, LEBS also initiated a Lake Erie Central Basin Trawling survey in response to the need for forage fish data from Management Unit 3 (as defined by the Yellow Perch Task Group). Results from these surveys contribute to Lake Erie Committee Fish Community Goals and Objectives. Our 2015 vessel operations were initiated in early April and continued into late November. During this time, crews of the R/V Muskie and R/V Bowfin deployed 121 bottom trawls covering 83.2 ha of lake-bottom and catching 105,600 fish totaling 4,065 kg during four separate trawl surveys in the western and central basins of Lake Erie. We deployed and lifted 9.5 km of gillnet, which caught an additional 805 fish, 100 (337 kg) of which were the native coldwater predators Lake Trout, Burbot, and Lake Whitefish (these data are reported in the 2016 Coldwater Task Group report). We also conducted 317 km of hydroacoustic survey transects (reported in the 2016 Forage Task Group report), collected 114 lower trophic (i.e. zooplankton and benthos) samples, and obtained 216 water quality observations (e.g., temperature profiles, and water samples). The LEBS also assisted CLC member agencies with the maintenance and expansion of GLATOS throughout all three Lake Erie sub-basins. Within the following report sections, we describe results from three trawl surveys – the spring and autumn Western Basin Forage Fish Assessment and the East Harbor Forage Fish Assessment – and the Lower Trophic Level Assessment conducted in 2015, and examine trends in the fish community structure and trophic status of Lake Erie. Results of our central basin trawl survey are reported in the 2016 Yellow Perch Task Group report.

Report↗
USGS2015

Toxicity reference values for chlorophacinone and their application for assessing anticoagulant rodenticide risk to raptors

Despite widespread use and benefit, there are growing concerns regarding hazards of second-generation anticoagulant rodenticides to non-target wildlife which may result in expanded use of first-generation compounds, including chlorophacinone (CPN). The toxicity of CPN over a 7-day exposure period was investigated in American kestrels ( Falco sparverius ) fed either rat tissue mechanically-amended with CPN, tissue from rats fed Rozol ® bait (biologically-incorporated CPN), or control diets (tissue from untreated rats or commercial bird of prey diet) ad libitum. Nominal CPN concentrations in the formulated diets were 0.15, 0.75 and 1.5 µg/g food wet weight, and measured concentrations averaged 94 % of target values. Kestrel food consumption was similar among groups and body weight varied by less than 6 %. Overt signs of intoxication, liver CPN residues, and changes in prothrombin time (PT), Russell’s viper venom time (RVVT) and hematocrit, were generally dose-dependent. Histological evidence of hemorrhage was present at all CPN dose levels, and most frequently observed in pectoral muscle and heart. There were no apparent differences in toxicity between mechanically-amended and biologically-incorporated CPN diet formulations. Dietary-based toxicity reference values at which clotting times were prolonged in 50 % of the kestrels were 79.2 µg CPN consumed/kg body weight-day for PT and 39.1 µg/kg body weight-day for RVVT. Based upon daily food consumption of kestrels and previously reported CPN concentrations found in small mammals following field baiting trials, these toxicity reference values might be exceeded by free-ranging raptors consuming such exposed prey. Tissue-based toxicity reference values for coagulopathy in 50 % of exposed birds were 0.107 µg CPN/g liver wet weight for PT and 0.076 µg/g liver for RVVT, and are below the range of residue levels reported in raptor mortality incidents attributed to CPN exposure. Sublethal responses associated with exposure to environmentally realistic concentrations of CPN could compromise survival of free-ranging raptors, and should be considered in weighing the costs and benefits of anticoagulant rodenticide use in pest control and eradication programs.

Ecotoxicology↗
USGS2012

Multiple functions of a multi-component mating pheromone in sea lamprey Petromyzon marinus

The role of the C24 sulphate in the mating pheromone component, 7α,12α,24-trihydroxy-5α-cholan-3-one 24-sulphate (3kPZS), to specifically induce upstream movement in ovulated female sea lampreys Petromyzon marinus was investigated. 7α,12α-dihydroxy-5α-cholan-3-one 24-oic acid (3kACA), a structurally similar bile acid released by spermiated males, but lacking the C24 sulphate ester, was tested in bioassays at concentrations between 10 −11 and 10 −14 molar (M). 3kACA did not induce upstream movement in females or additional reproductive behaviours. In contrast, spermiated male washings induced upstream movement, prolonged retention on a nest and induced an array of nesting behaviours. Differential extraction and elution by solid-phase extraction resins showed that components other than 3kPZS + 3kACA are necessary to retain females on nests and induce nest cleaning behaviours. All pheromone components, including components in addition to 3kPZS + 3kACA that retain females and induce nest cleaning behaviours were released from the anterior region of the males, as had been reported for 3kPZS. It is concluded that the sea lamprey male mating pheromone has multiple functions and is composed of multiple components.

Journal of Fish Biology↗
USGS2023

Study design and methods of the Wells and Enteric disease Transmission (WET) Trial, a randomised controlled trial

Introduction: The burden of disease attributed to drinking water from private wells is not well characterised. The Wells and Enteric disease Transmission trial is the first randomised controlled trial to estimate the burden of disease that can be attributed to the consumption of untreated private well water. To estimate the attributable incidence of gastrointestinal illness (GI) associated with private well water, we will test if the household treatment of well water by ultraviolet light (active UV device) versus sham (inactive UV device) decreases the incidence of GI in children under 5 years of age. Methods and analysis: The trial will enrol (on a rolling basis) 908 families in Pennsylvania, USA, that rely on private wells and have a child 3 years old or younger. Participating families are randomised to either an active whole-house UV device or a sham device. During follow-up, families will respond to weekly text messages to report the presence of signs and symptoms of gastrointestinal or respiratory illness and will be directed to an illness questionnaire when signs/symptoms are present. These data will be used to compare the incidence of waterborne illness between the two study groups. A randomly selected subcohort submits untreated well water samples and biological specimens (stool and saliva) from the participating child in both the presence and absence of signs/symptoms. Samples are analysed for the presence of common waterborne pathogens (stool and water) or immunoconversion to these pathogens (saliva). Ethics: Approval has been obtained from Temple University’s Institutional Review Board (Protocol 25665). The results of the trial will be published in peer-reviewed journals. Trial registration number: NCT04826991.

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