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At least 919 records · Page 51Linked to original sources
USGS1981

Tonalites in crustal evolution

Tonalites, including trondhjemite as a variety, played three roles through geological time in the generation of Earth’s crust. Before about 2.9 Ga ago they were produced largely by simple partial melting of metabasalt to give the dominant part of Archaean grey gneiss terranes. These terranes are notably bimodal; andesitic rocks are rare. Tonalites played a crucial role in the generation of this protocontinental and oldest crust 3.7- 2.9 Ga ago in that they were the only low-density, high-SiO 2 rocks produced directly from basaltic crust. In the enormous event giving the greenstone-granite terranes, mostly 2.8-2.6 Ga ago, tonalites formed in lesser but still important proportions by partial melting of metabasalt in the lower regions of down-buckled greenstone belts and by remobilization of older grey gneisses. Tectonism in the Archaean (3.9- 2.5 Ga ago) perhaps was controlled by small-cell convection (McKenzie & Weiss 1975). Little or no ophiolite or eclogite formed, and only minor andesite. Plate tectonics of modern type (involving large, rigid plates) commenced in the early Proterozoic. Uniformitarianism thus goes back one-half of the age of the earth. Tonalites compose about 5-10 % of crust generated in Proterozoic and Phanerozoic time at convergent oceanic-continental margins. They occur here as minor to prominent members of the compositionally continuous continental-margin batholiths. A simple model of generation of these batholiths is offered: mantle-derived mafic magma pools in the lower crust above a subduction zone reacts with and incorporates wall-rock components (Bowen 1922), and breaches its roof rocks as an initial diapir. This mantle magma also develops a gradient of partial melting in its wall rocks. This wall-rock melt accretes in the collapsed chamber and moves up the conduit broached by the initial diapir, the higher, less siliceous fractions of melting first, the lower, more siliceous (and further removed) fractions of melting last. The process gives in the optimum case a mafic-to-siliceous sequence of diorite or quartz diorite through tonalite or quartz monzodiorite to granodiorite and granite. The model implies that great masses of cumulate phases and refractory wall rock form the roots of continentalmargin batholiths, and that migmatites overlie that residuum and underlie the batholiths.

Philosophical Transactions of the Royal Society A:↗
USGS2024

Lahars: Origins, behavior and hazards

Volcanic debris flows that originate at potentially active volcanoes are called lahars. Lahars are like debris flows in non-volcanic terrain but can most notably differ in origin and size. Primary lahars occur during eruptions and may have novel origins such as turbulent mixing of hot rock moving across ice- and snow-clad volcanoes and eruptions through crater lakes. Lahars range in volume to more than a cubic kilometer (10 9 m 3 ), with the biggest ones caused by huge deep-seated flank collapses of water-saturated edifice rock. Because they can be so voluminous, can have high water contents, and commonly can be clay rich, these lahars can travel tens to even hundreds of kilometers. Long transport causes evolution of flow types from flood flow to hyperconcentrated flow to debris flow. Lahars capable of traveling far downstream are commonly sufficiently liquefied that they drape valley slopes and leave behind thin deposits as they pass downstream. Only in valley bottoms are lahars likely to emplace thick deposits, and even there the deposits are apt to be much thinner than peak flow depths. Flows with long transport change character with time and distance downstream. Deposits, especially those in valley bottoms, can accrete during intervals that represent a significant proportion of the time it takes the flow to pass (typically minutes). The combination of flows changing character and their progressive accretion imposes distinctive characteristics on their deposits such as normal and inverse grading. Historically, lahars have caused thousands of fatalities and destroyed entire towns. Perhaps the most disastrous known lahar occurred in 1985 at Nevado del Ruiz in Colombia and killed more than 23,000 people. Since that disaster, an increasing awareness of lahar hazards has led to efforts to mitigate them. In recent decades, improved land-use decisions, monitoring and communication have improved hazard responses and saved many lives. Lahar hazard maps and development of lahar inundation models have helped planners and people at risk to better understand the nature of the risk owing to lahars.

Book chapter↗
USGS2001

Knickzone propagation in the Black Hills and northern High Plains: A different perspective on the late Cenozoic exhumation of the Laramide Rocky Mountains

Geomorphic research in the Black Hills and northern High Plains poses an intriguing hypothesis for the Cenozoic evolution of this salient of the Laramide Rockies. Most recently, geologists have appealed to late Cenozoic epeirogenic uplift or climate change to explain the post-Laramide unroofing of the Rockies. On the basis of field mapping and the interpretation of long-valley profiles, we conclude that the propagation of knickzones is the primary mechanism for exhumation in the Black Hills. Long profiles of major drainages show discrete breaks in the slope of the channel gradient that are not coincident with changes in rock type. We use the term knickzones to describe these features because their profiles are broadly convex over tens of kilometers. At and below the knickzone, the channel is incising into bedrock, abandoning a flood plain, and forming a terrace. Above the knickzone, the channel is much less incised, resulting in a broad valley bottom. Numerous examples of stream piracy are documented, and in each case, the capture is recorded in the same terrace level. These observations are consistent with migrating knickzones that have swept through Black Hills streams, rearranging drainages in their wake. We demonstrate there are two knickzone fronts associated with mapped terraces. Preliminary field evidence of soil development shows that these terraces are time transgressive in nature. Our data strongly suggest that knickzone propagation must be considered a viable mechanism driving late Cenozoic fluvial incision and exhumation of the northern High Plains and adjacent northern Rocky Mountains.

South Dakota, Wyoming↗
USGS1998

Early proterozoic evolution of the saskatchewan craton and its allochthonous coyer, trans-hudson Orogen

The composition, chronology, and structural relations of the Saskatchewan Craton and enveloping mylonitic rocks exposed in basement windows of the Glennie Domain, Trans‐Hudson Orogen, have been determined by geochemical, geochronologic, and structural studies accompanying detailed field mapping. Basement windows lie along the hinge zone of a regional crustal culmination and consist mostly of 2.4–2.5 Ga felsic plutonic rocks enveloped by the Nistowiak Thrust. The Nistowiak Thrust is a folded, 1–2 km thick, upper amphibolite facies mylonite zone formed during emplacement of the Flin Flon–Glennie Complex across the Saskatchewan Craton. It is likely correlative to the Pelican Thrust, which envelops basement windows in the Hanson Lake Block ∼100 km to the east. An internal high strain zone within the overlying nappe pile, the Guncoat Thrust, is composed primarily of mylonitized porphyroclastic pelitic and psammitic migmatites. U‐Pb geochronological results suggest calc‐alkaline plutonism from 1889–1837 Ma, thrust stacking, peak metamorphism and associated anatexis between 1837 and 1809 Ma, isotopic closure of titanite at 1790–1772 Ma, and intrusion of late granitic rocks at 1770–1762 Ma. This is in agreement with ages from the Hanson Lake Block, and La Ronge, Kisseynew, and Flin‐Flon domains in Saskatchewan and Manitoba, and from the Ungava‐Baffin portion of Trans‐Hudson Orogen, suggesting broadly synchronous thermotectonic processes along a strike length of 2000 km. We speculate that the Saskatchewan Craton, rather than representing an exotic continental fragment, rifted from the Superior and/or Hearne Provinces at ca. 2.1 Ga and that the Trans‐Hudson Orogen is an internal orogen. In this scenario the Maniwekan Ocean, developed between the Rae‐Hearne and Superior cratons, opened and closed about similar pole(s) of plate motion.

Journal of Geology↗
USGS2022

Highly pathogenic avian influenza is an emerging disease threat to wild birds in North America

Prior to the emergence of the A/goose/Guangdong/1/1996 (Gs/GD) H5N1 influenza A virus, the long-held and well-supported paradigm was that highly pathogenic avian influenza (HPAI) outbreaks were restricted to poultry, the result of cross-species transmission of precursor viruses from wild aquatic birds that subsequently gained pathogenicity in domestic birds. Therefore, management agencies typically adopted a prevention, control, and eradication strategy that included strict biosecurity for domestic bird production, isolation of infected and exposed flocks, and prompt depopulation. In most cases, this strategy has proved sufficient for eradicating HPAI. Since 2002, this paradigm has been challenged with many detections of viral descendants of the Gs/GD lineage among wild birds, most of which have been associated with sporadic mortality events. Since the emergence and evolution of the genetically distinct clade 2.3.4.4 Gs/GD lineage HPAI viruses in approximately 2010, there have been further increases in the occurrence of HPAI in wild birds and geographic spread through migratory bird movement. A prominent example is the introduction of clade 2.3.4.4 Gs/GD HPAI viruses from East Asia to North America via migratory birds in autumn 2014 that ultimately led to the largest outbreak of HPAI in the history of the United States. Given the apparent maintenance of Gs/GD lineage HPAI viruses in a global avian reservoir; bidirectional virus exchange between wild and domestic birds facilitating the continued adaptation of Gs/GD HPAI viruses in wild bird hosts; the current frequency of HPAI outbreaks in wild birds globally, and particularly in Eurasia where Gs/GD HPAI viruses may now be enzootic; and ongoing dispersal of AI viruses from East Asia to North America via migratory birds, HPAI now represents an emerging disease threat to North American wildlife. This recent paradigm shift implies that management of HPAI in domestic birds alone may no longer be sufficient to eradicate HPAI viruses from a given country or region. Rather, agencies managing wild birds and their habitats may consider the development or adoption of mitigation strategies to minimize introductions to poultry, to reduce negative impacts on wild bird populations, and to diminish adverse effects to stakeholders using wildlife resources. The main objective of this review is, therefore, to provide information that will assist wildlife managers in developing mitigation strategies or approaches for dealing with outbreaks of Gs/GD HPAI in wild birds in the form of preparedness, surveillance, research, communications, and targeted management actions. Resultant outbreak response plans and actions may represent meaningful steps of wildlife managers toward the use of collaborative and multi-jurisdictional One Health approaches when it comes to the detection, investigation, and mitigation of emerging viruses at the human-domestic animal-wildlife interface.

Journal of Wildlife Management↗
USGS2013

How does pedogenesis drive plant diversity?

Some of the most species-rich plant communities occur on ancient, strongly weathered soils, whereas those on recently developed soils tend to be less diverse. Mechanisms underlying this well-known pattern, however, remain unresolved. Here, we present a conceptual model describing alternative mechanisms by which pedogenesis (the process of soil formation) might drive plant diversity. We suggest that long-term soil chronosequences offer great, yet largely untapped, potential as 'natural experiments' to determine edaphic controls over plant diversity. Finally, we discuss how our conceptual model can be evaluated quantitatively using structural equation modeling to advance multivariate theories about the determinants of local plant diversity. This should help us to understand broader-scale diversity patterns, such as the latitudinal gradient of plant diversity.

Trends in Ecology and Evolution↗
USGS2019

A stratigraphic approach to inferring depositional ages from detrital geochronology data

With the increasing use of detrital geochronology data for provenance analyses, we have also developed new constraints on the age of otherwise undateable sedimentary deposits. Because a deposit can be no older than its youngest mineral constituent, the youngest defensible detrital mineral age defines the maximum depositional age of the sampled bed. Defining the youngest `defensible' age in the face of uncertainty (e.g., analytical and geological uncertainty, or sample contamination) is challenging. The current standard practice of finding multiple detrital minerals with indistinguishable ages provides confidence that a given age is not an artifact; however, we show how requiring this overlap reduces the probability of identifying the true youngest component age. Barring unusual complications, the principle of superposition dictates that sedimentary deposits must get younger upsection. This fundamental constraint can be incoporated into the analysis of depositional ages in sedimentary sections through the use of Bayesian statistics, allowing for the inference of bounded estimates of true depositional ages and uncertainties from detrital geochronology so long as some minimum age constraints are present. We present two approaches for constructing a Bayesian model of deposit ages, first solving directly for the ages of deposits with the prior constraint that the ages of units must obey stratigraphic ordering, and second describing the evolution of ages with a curve that represents the sediment accumulation rate. Using synthetic examples we highlight how this method preforms in less-than-ideal circumstances. In an example from the Magallanes Basin of Patagonia, we demonstrate how introducing other age information from the stratigraphic section (e.g., fossil assemblages or radiometric dates) and formalizing the stratigraphic context of samples provides additional constraints on and information regarding depositional ages or derived quantities (e.g., sediment accumulation rates) compared to isolated analysis of individual samples.

Frontiers in Earth Science↗
USGS2019

Landscape genetics reveal broad and fine‐scale population structure due to landscape features and climate history in the northern leopard frog (Rana pipiens) in North Dakota

Prehistoric climate and landscape features play large roles structuring wildlife populations. The amphibians of the northern Great Plains of North America present an opportunity to investigate how these factors affect colonization, migration, and current population genetic structure. This study used 11 microsatellite loci to genotype 1,230 northern leopard frogs ( Rana pipiens ) from 41 wetlands (30 samples/wetland) across North Dakota. Genetic structure of the sampled frogs was evaluated using Bayesian and multivariate clustering methods. All analyses produced concordant results, identifying a major east–west split between two R. pipiens population clusters separated by the Missouri River. Substructuring within the two major identified population clusters was also found. Spatial principal component analysis (sPCA) and variance partitioning analysis identified distance, river basins, and the Missouri River as the most important landscape factors differentiating R. pipiens populations across the state. Bayesian reconstruction of coalescence times suggested the major east–west split occurred ~13–18 kya during a period of glacial retreat in the northern Great Plains and substructuring largely occurred ~5–11 kya during a period of extreme drought cycles. A range‐wide species distribution model (SDM) for R. pipiens was developed and applied to prehistoric climate conditions during the Last Glacial Maximum (21 kya) and the mid‐Holocene (6 kya) from the CCSM4 climate model to identify potential refugia. The SDM indicated potential refugia existed in South Dakota or further south in Nebraska. The ancestral populations of R. pipiens in North Dakota may have inhabited these refugia, but more sampling outside the state is needed to reconstruct the route of colonization. Using microsatellite genotype data, this study determined that colonization from glacial refugia, drought dynamics in the northern Great Plains, and major rivers acting as barriers to gene flow were the defining forces shaping the regional population structure of R. pipiens in North Dakota.

North Dakota↗
USGS2010

The tectono-thermal evolution of the Waterbury dome, western Connecticut, based on U-Pb and 40 Ar/ 39 Ar ages

The Waterbury dome, located in the Rowe-Hawley zone in western Connecticut, is a triple window exposing three terranes: parautochthonous or allochthonous peri-Laurentian rocks in its lowest level 1, allochthonous rocks of the Rowe-Hawley zone in its middle level 2, and allochthonous cover rocks, including Silurian-Devonian rocks of the Connecticut Valley Gaspé trough, in its highest level 3. Levels 1 and 2 are separated by the Waterbury thrust, a fault equivalent to Cameron's Line, the Taconic suture in southwestern New England. Relict mesoscopic folds and foliation in levels 1 and 2 are truncated by a dominant D 2 migmatitic layering and are likely Taconic. U-Pb zircon crystallization ages of felsic orthogneiss and tonalite, syntectonic with respect to the formation of S 2 , and a biotite quartz diorite that crosscuts level 2 paragneiss are 437 ± 4 Ma, 434 ± 4 Ma, and 437 ± 4 Ma, respectively. Level 3 nappes were emplaced over the Waterbury dome along an Acadian décollement synchronous with the formation of a D 3 thrust duplex in the dome. The décollement truncates the Ky + Kfs-in (migmatite) isograd in the dome core and a St-in isograd in level 3 nappes, indicating that peak metamorphic conditions in the dome core and nappe cover rocks formed in different places at different times. Metamorphic overgrowths on zircon from the felsic orthogneiss in the Waterbury dome have an age of 387 ± 5 Ma. Rocks of all levels and the décollement are folded by D 4 folds that have a strongly developed, regional crenulation cleavage and D 5 folds. The Waterbury dome was formed by thrust duplexing followed by fold interference during the Acadian orogeny. The 40 Ar/ 39 Ar ages of amphibole, muscovite, biotite, and K-feldspar from above and below the décollement are ca. 378 Ma, 355 Ma, 360 Ma (above) and 340 (below), and 288 Ma, respectively. Any kilometer-scale vertical movements between dome and nappe rocks were over by ca. 378 Ma. Core and cover rocks of the Waterbury dome record synchronous, post-Acadian cooling.

Connecticut↗
USGS2012

Igneous activity, metamorphism, and deformation in the Mount Rogers area of SW Virginia and NW North Carolina: A geologic record of Precambrian tectonic evolution of the southern Blue Ridge Province

Mesoproterozoic basement in the vicinity of Mount Rogers is characterized by considerable lithologic variability, including major map units composed of gneiss, amphibolite, migmatite, meta-quartz monzodiorite and various types of granitoid. SHRIMP U-Pb geochronology and field mapping indicate that basement units define four types of occurrences, including (1) xenoliths of ca. 1.33 to ≥1.18 Ga age, (2) an early magmatic suite including meta-granitoids of ca. 1185–1140 Ma age that enclose or locally intrude the xenoliths, (3) metasedimentary rocks represented by layered granofels and biotite schist whose protoliths were likely deposited on the older meta-granitoids, and (4) a late magmatic suite composed of younger, ca. 1075–1030 Ma intrusive rocks of variable chemical composition that intruded the older rocks. The magmatic protolith of granofels constituting part of a layered, map-scale xenolith crystallized at ca. 1327 Ma, indicating that the lithology represents the oldest, intact crust presently recognized in the southern Appalachians. SHRIMP U-Pb data indicate that periods of regional Mesoproterozoic metamorphism occurred at 1170–1140 and 1070–1020 Ma. The near synchroneity in timing of regional metamorphism and magmatism suggests that magmas were emplaced into crust that was likely at near-solidus temperatures and that melts might have contributed to the regional heat budget. Much of the area is cut by numerous, generally east- to northeast-striking Paleozoic fault zones characterized by variable degrees of ductile deformation and recrystallization. These high-strain fault zones dismember the terrane, resulting in juxtaposition of units and transformation of basement lithologies to quartz- and mica-rich tectonites with protomylonitic and mylonitic textures. Mineral assemblages developed within such zones indicate that deformation and recrystallization likely occurred at greenschist-facies conditions at ca. 340 Ma.

North Carolina, Virginia↗
USGS2024

Chronic wasting disease alters the movement behavior and habitat use of mule deer during clinical stages of infection

Integrating host movement and pathogen data is a central issue in wildlife disease ecology that will allow for a better understanding of disease transmission. We examined how adult female mule deer ( Odocoileus hemionus ) responded behaviorally to infection with chronic wasting disease (CWD). We compared movement and habitat use of CWD-infected deer ( n = 18) to those that succumbed to starvation (and were CWD-negative by ELISA and IHC; n = 8) and others in which CWD was not detected ( n = 111, including animals that survived the duration of the study) using GPS collar data from two distinct populations collared in central Wyoming, USA during 2018–2022. CWD and predation were the leading causes of mortality during our study (32/91 deaths attributed to CWD and 27/91 deaths attributed to predation). Deer infected with CWD moved slower and used lower elevation areas closer to rivers in the months preceding death compared with uninfected deer that did not succumb to starvation. Although CWD-infected deer and those that died of starvation moved at similar speeds during the final months of life, CWD-infected deer used areas closer to streams with less herbaceous biomass than starved deer. These behavioral differences may allow for the development of predictive models of disease status from movement data, which will be useful to supplement field and laboratory diagnostics or when mortalities cannot be quickly retrieved to assess cause-specific mortality. Furthermore, identifying individuals who are sick before predation events could help to assess the extent to which disease mortality is compensatory with predation. Finally, infected animals began to slow down around 4 months prior to death from CWD. Our approach for detecting the timing of infection-induced shifts in movement behavior may be useful in application to other disease systems to better understand the response of wildlife to infectious disease.

Wyoming↗
USGS1990

H, O, Sr, Nd, and Pb isotope geochemistry of the Latir volcanic field and cogenetic intrusions, New Mexico, and relations between evolution of a continental magmatic center and modifications of the lithosphere

Over 200 H, O, Sr, Nd, and Pb isotope analyses, in addition to geologic and petrologic constraints, document the magmatic evolution of the 28.5-19 Ma Latir volcanic field and associated intrusive rocks, which includes multiple stages of crustal assimilation, magma mixing, protracted crystallization, and open- and closed-system evolution in the upper crust. In contrast to data from younger volcanic centers in northern New Mexico, relatively low and restricted primary ??18O values (+6.4 to +7.4) rule out assimilation of supracrustal rocks enriched in 18O. Initial 87Sr/86Sr ratios (0.705 to 0.708), ??18O values (-2 to-7), and 206Pb/204Pb ratios (17.5 to 18.4) of metaluminous precaldera volcanic rocks and postcaldera plutonic rocks suggest that most Latir rocks were generated by fractional crystallization of substantial volumes of mantle-derived basaltic magma that had near-chondritic Nd isotope ratios, accompanied by assimilation of crustal material in two main stages: 1) assimilation of non-radiogenic lower crust, followed by 2) assimilation of middle and upper crust by inter-mediate-composition magmas that had been contaminated during the first stage. Magmatic evolution in the upper crust peaked with eruption of the peralkaline Amalia Tuff (???26 Ma), which evolved from metaluminous parental magmas. A third stage of late, roofward assimilation of Proterozoic rocks in the Amalia Tuff magma is indicated by trends in initial 87Sr/86Sr and 206Pb/204Pb ratios from 0.7057 to 0.7098 and 19.5 to 18.8, respectively, toward the top of the pre-eruptive magma chamber. Highly evolved postcaldera plutons are generally fine grained and are zoned in initial 87Sr/86Sr and 206Pb/204Pb ratios, varying from 0.705 to 0.709 and 17.8 to 18.6, respectively. In contrast, the coarser-grained Cabresto Lake (???25 Ma) and Rio Hondo (???21 Ma) plutons have relatively homogeneous initial 87Sr/86Sr and 206Pb/204Pb ratios of approximately 0.7053 and 17.94 and 17.55, respectively. ??18O values for all the postcaldera plutons overlap those of the precaldera rocks and Amalia Tuff, except for those for two late-stage rhyolite dikes associated with the Rio Hondo pluton that have ??18O values of-8.6 and-9.5; these dikes are the only Latir rocks which may be largely crustal melts. Chemical and isotopic data from the Latir field suggest that large fluxes of mantle-derived basaltic magma are necessary for developing and sustaining large-volume volcanic centers. Development of a detailed model suggests that 6-15 km of new crust may have been added beneath the volcanic center; such an addition may result in significant changes in the chemical and Sr and Nd isotopic compositions of the crust, although Pb isotope ratios will remain relatively unchanged. If accompanied by assimilation, crystallization of pooled basaltic magma near the MOHO may produce substantial cumulates beneath the MOHO that generate large changes in the isotopic composition of the upper mantle. The Latir field may be similar to other large-volume, long-lived intracratonal volcanic fields that fundamentally owe their origins to extensive injection of basaltic magma into the lower parts of their magmatic systems. Such fields may overlie areas of significant crustal growth and hybridization. ?? 1990 Springer-Verlag.

Contributions to Mineralogy and Petrology↗
USGS2024

Transdisciplinary research supports the sustainability of barrier island systems threatened by climate change

The management of developed barrier islands is often piece-meal and reactionary despite the complex, dynamic nature of these systems, and sustainable practices will become increasingly difficult due to heightened pressures of climate change. Adaptation actions, including nature-based solutions, need to be thoroughly evaluated prior to implementation to understand system-wide impacts and avoid maladaptation. Anarde et al. (2024a), ( https://doi.org/10.1029/2023ef003672 ), Anarde et al. (2024b), ( https://doi.org/10.1029/2023ef004200 ) is the latest important contribution in a growing body of transdisciplinary research that more robustly evaluates the complex physical process-and-response relationship of barrier systems via sophisticated numerical modeling approaches that also interface with socioeconomic models to inform coastal management actions in response to mitigating coastal risk. This new research indicates the importance of coordinated system-scale barrier island management, as strategies to reduce coastal hazard risk in one location will directly affect adjacent communities. Further, this work demonstrates that reducing barrier management interventions may actually promote barrier recovery and sustainability in the face of sea level rise. In addition, recent advances in the analysis and application of remotely sensed data from satellites and oblique aerial photography provide scientists an unprecedented opportunity to track coastal evolution over a wide range of spatial and temporal scales at minimal cost. As sea level rise and changing storm patterns challenge the sustainable management of barrier island systems, integrating these advanced, transdisciplinary tools will enable scientists and coastal practitioners to more thoroughly evaluate coastal adaptation options, efficiently invest limited resources to mitigate coastal hazard risk for communities, support healthy ecosystems, and reduce system-wide impacts.

Earth's Future↗
USGS2007

Plumage development and molt in Long-tailed Manakins ( Chiroxiphia linearis ): Variation according to sex and age

Lek-mating Long-tailed Manakins ( Chiroxiphia linearis ) exhibit an unusual pattern of delayed plumage maturation. Each year, males progress through a series of predefinitive plumages before attaining definitive plumage in their fifth calendar year. Females also exhibit variation in plumage coloration, with some females displaying male-like plumage characteristics. Using data from mist-net captures in northwest Costa Rica ( n = 1,315) and museum specimens from throughout the range of Long-tailed Manakins ( n = 585), we documented the plumage sequence progression of males, explored variation in female plumage, and described the timing of molt in this species. Males progressed through a series of age-specific predefinitive plumages, which enabled the accurate aging of predefinitive-plumaged males in the field; this predefinitive plumage sequence is the basis for age-related status-signaling in these males. Females tended to acquire red coloration in the crown as they aged. However, colorful plumage in females may be a byproduct of selection on bright male plumage. Females exhibited an early peak of molt activity from February to April, little molt from May through July, and a second, more pronounced peak of molt activity in October. By contrast, males in older predefinitive-plumage stages and males in definitive plumage exhibited comparable unimodal distributions in molt activity beginning in June and peaking between July and October. Our data are consistent with selective pressure to avoid the costs of molt-breeding overlap in females and older males. Our findings have important implications for social organization and signaling in Long- tailed Manakins, and for the evolution of delayed plumage maturation in birds.

The Auk↗
USGS2012

A Gibbs sampler for Bayesian analysis of site-occupancy data

1. A Bayesian analysis of site-occupancy data containing covariates of species occurrence and species detection probabilities is usually completed using Markov chain Monte Carlo methods in conjunction with software programs that can implement those methods for any statistical model, not just site-occupancy models. Although these software programs are quite flexible, considerable experience is often required to specify a model and to initialize the Markov chain so that summaries of the posterior distribution can be estimated efficiently and accurately. 2. As an alternative to these programs, we develop a Gibbs sampler for Bayesian analysis of site-occupancy data that include covariates of species occurrence and species detection probabilities. This Gibbs sampler is based on a class of site-occupancy models in which probabilities of species occurrence and detection are specified as probit-regression functions of site- and survey-specific covariate measurements. 3. To illustrate the Gibbs sampler, we analyse site-occupancy data of the blue hawker, Aeshna cyanea (Odonata, Aeshnidae), a common dragonfly species in Switzerland. Our analysis includes a comparison of results based on Bayesian and classical (non-Bayesian) methods of inference. We also provide code (based on the R software program) for conducting Bayesian and classical analyses of site-occupancy data.

Methods in Ecology and Evolution↗
USGS1971

Evolution of thought on ore controls in east Tennessee

All early students of the zinc and barite deposits of East Tennessee, noting the geographic coincidence of the principal mining area with complex late Paleozoic geologic structure, concluded that (1) the ore-bearing breccias were produced by Appalachian tectonic forces and that (2) mineralizing solutions gained access through fault-produced channelways. In 1931, Ulrich suggested that the breccias were produced by collapse and fragmentation resulting from solution of the carbonate rocks. This idea was promptly rejected by most geologists, and for the next 15 years nearly all papers on these deposits contained refutations of Ulrich's hypothesis and "proof" of the late Paleozoic tectonic origin of the breccias. Recognition by Odell in 1950 of a spatial association between thinning of the lime-stone zone of the Kingsport Formation and the presence of ore bodies, plus the observation that all identifiable blocks in the breccias were displaced downward as much as 30 to 50 feet, led him to suggest that foundering of the rocks over solution-thinned zones produced the breccias. Hydrothermal fluids, rather than ordinary ground water, were thought to be the dissolving agent.Kendall, in 1960, described a stratified "varved" matrix with detrital sphalerite grains in many breccias at Jefferson City, in which lamination is parallel to bedding of the host Kingsport Formation, indicating that both brecciation and mineralization occurred while the rocks were horizontal. Ruskell about 1960 pointed out the similarity between cross sections of southwest Wisconsin ore bodies and those of East Tennessee when the latter were rotated to a horizontal position. Detailed studies of the post-Knox unconformity led to recognition of a paleokarst topography of considerable relief developed on this surface. Regional stratigraphic studies of the Knox Group by Harris demonstrated the probability of pre-Middle Ordovician exposure of the Kingsport somewhere to the north or northwest, providing a recharge area for ground waters at that time. Detailed mapping of ore bodies, barren areas, and related structures by the mining-company geologists, plus application of the principles of ground-water hydrology and rock mechanics, has led to the theory, generally accepted in the district, of solution-collapse origin of the breccias, probably during Ordovician time.

Tennessee↗
USGS2022

The Pacific as the world’s greatest theater of bird migration: Extreme flights spark questions about physiological capabilities, behavior, and the evolution of migratory pathways

The Pacific Basin, by virtue of its vastness and its complex aeroscape, provides unique opportunities to address questions about the behavioral and physiological capabilities and mechanisms through which birds can complete spectacular flights. No longer is the Pacific seen just as a formidable barrier between terrestrial habitats in the north and the south, but rather as a gateway for specialized species, such as shorebirds, to make a living on hemispherically distributed seasonal resources. This recent change in perspective is dramatic, and the research that underpins it has presented new opportunities to learn about phenomena that often challenge a sense of normal. Ancient Polynesians were aware of the seasonal passage of shorebirds and other landbirds over the Pacific Ocean, incorporating these observations into their navigational “tool kit” as they explored and colonized the Pacific. Some ten centuries later, systematic visual observations and tracking technology have revealed much about movement of these shorebirds, especially the enormity of their individual nonstop flights. This invites a broad suite of questions, often requiring comparative studies with bird migration across other ocean basins, or across continents. For example, how do birds manage many days of nonstop exercise apparently without sleep? What mechanisms explain birds acting as if they possess a Global Positioning System? How do such extreme migrations evolve? Through advances in both theory and tracking technology, biologists are poised to greatly expand the horizons of movement ecology as we know it. In this integrative review, we present a series of intriguing questions about trans-Pacific migrant shorebirds and summarize recent advances in knowledge about migratory behavior operating at temporal scales ranging from immediate decisions during a single flight, to adaptive learning throughout a lifetime, to evolutionary development of migratory pathways. Recent advances in this realm should stimulate future research across the globe and across a broad array of disciplines.

Ornithology↗
USGS2018

Co‐occurrence dynamics of endangered Lower Keys marsh rabbits and free‐ranging domestic cats: Prey responses to an exotic predator removal program

The Lower Keys marsh rabbit ( Sylvilagus palustris hefneri ) is one of many endangered endemic species of the Florida Keys. The main threats are habitat loss and fragmentation from sea‐level rise, development, and habitat succession. Exotic predators such as free‐ranging domestic cats ( Felis catus ) pose an additional threat to these endangered small mammals. Management strategies have focused on habitat restoration and exotic predator control. However, the effectiveness of predator removal and the effects of anthropogenic habitat modifications and restoration have not been evaluated. Between 2013 and 2015, we used camera traps to survey marsh rabbits and free‐ranging cats at 84 sites in the National Key Deer Refuge, Big Pine Key, Florida, USA. We used dynamic occupancy models to determine factors associated with marsh rabbit occurrence, colonization, extinction, and the co‐occurrence of marsh rabbits and cats during a period of predator removal. Rabbit occurrence was positively related to freshwater habitat and patch size, but was negatively related to the number of individual cats detected at each site. Furthermore, marsh rabbit colonization was negatively associated with relative increases in the number of individual cats at each site between survey years. Cat occurrence was negatively associated with increasing distance from human developments. The probability of cat site extinction was positively related to a 2‐year trapping effort, indicating that predator removal reduced the cat population. Dynamic co‐occurrence models suggested that cats and marsh rabbits co‐occur less frequently than expected under random conditions, whereas co‐detections were site and survey‐specific. Rabbit site extinction and colonization were not strongly conditional on cat presence, but corresponded with a negative association. Our results suggest that while rabbits can colonize and persist at sites where cats occur, it is the number of individual cats at a site that more strongly influences rabbit occupancy and colonization. These findings indicate that continued predator management would likely benefit endangered small mammals as they recolonize restored habitats.

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