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At least 91 records · Page 5Linked to original sources
USGS2018

River reach restored by dam removal offers suitable spawning habitat for endangered Shortnose Sturgeon

The lowermost dam on the Penobscot River, Maine, was removed in 2013, making new habitat available for migratory fish. There is no evidence that endangered Shortnose Sturgeon Acipenser brevirostrum have spawned in the Penobscot River in recent years, but dam removal has facilitated access to potential freshwater habitat essential for spawning. Spawning success also depends on the quality of the available habitat. We sought to describe the distribution and amount of suitable spawning habitat in the first 5-km reach upstream of the removed dam. Previously collected river elevation and bottom substrate data were used to create two-dimensional hydrodynamic simulations of the reach for spring discharges ranging from 310 to 1480 m3 s-1 using the program River2D. Simulations were validated and adjusted using field-collected data. Suitable spawning habitat was predicted based on literature-informed suitability curves of depth, velocity, and bottom substrate. Between 41% and 63% of the study area offered usable spawning habitat, depending on river discharge. Velocity was the most limiting characteristic to overall suitability at all modeled discharges. Embeddedness was minimal at suitable sites. Based on the habitat characteristics considered, the newly accessible reach of the Penobscot River could support Shortnose Sturgeon spawning, offering critical habitat for this endangered species.

Transactions of the American Fisheries Society↗
USGS2019

Freshwater tidal forests and estuarine wetlands may confer early life growth advantages for delta-reared Chinook Salmon

Large river deltas are complex ecosystems that are believed to play a pivotal role in promoting the early marine growth and survival of threatened Chinook Salmon Oncorhynchus tshawytscha . We used a fish bioenergetics model to assess the functional role of multiple delta habitats across a gradient of salinities and vegetation types, where consumption and growth rate potential (GRP) were considered as proxies for habitat quality. We subsequently compared our model output to empirical, or realized , growth estimates from scale circuli. In terms of consumption, prey energy density (ED prey ) was 46–86% higher in tidal freshwater forest than in any other habitat type, while estimated consumption rates (expressed as proportion of maximum daily consumption; P cmax ) were positively correlated with FL. These size‐related differences in P cmax led to a noticeable increase along a freshwater‐to‐saline gradient from roughly 0.25 in tidal freshwater forest to 0.55 in the offshore subtidal zone, yet despite higher observed P cmax values in nearshore and offshore habitats, the tidal freshwater forest and emergent salt marsh demonstrated the highest modeled GRP values. Similarly, realized growth rates for fish caught in tidal freshwater forest were up to 0.5% higher per day than for fish caught in the offshore area, but habitat‐level differences were overshadowed by allometry and rearing origin. Scales from unmarked fish (assumed to be of wild origin) indicated that they grew, on average, 11% faster than did hatchery fish; however, these differences were subtle and were more obvious at fork lengths <100 mm. Our results suggest that tidal forests and emergent marshes may offer early life growth advantages for wild Chinook Salmon, but that wild and hatchery fish can compensate as they move seaward by opportunistically consuming greater quantities of low‐energy density prey, taking advantage of pulses of larval forage fish, or by spending time in multiple interconnected habitat types.

Transactions of the American Fisheries Society↗
USGS2019

Acidification impacts and goals for gauging recovery of Brook Trout populations and fish communities in streams of the Western Adirondack Mountains, New York, USA

Results from several long‐term monitoring programs in the western Adirondack Mountains, New York, indicate that acid–base chemistry of headwater streams has remained unchanged or improved only marginally since the 1990s. A paucity of quantitative fishery data, however, limits our understanding of the pre‐acidified communities as well as present‐day impacts of acidification on fish assemblages, which impedes efforts to evaluate temporal trends and biological recovery in streams of the region. Fish communities were characterized at 48 streams (chemistry was assessed at 47 streams) in the western Adirondacks at least once during summer 2014–2016 to assess present‐day effects of acidification on fish assemblages, refine important relations, and identify biological targets and chemical effect thresholds that could help gauge biological recovery across the region. Concentrations of inorganic aluminum (Al i ) exceeded chronic and acute toxicity thresholds (1.0 and 2.0 μmol/L) in 21.3% and 8.5%, respectively, of 47 study streams sampled during summer 2014–2016 and in 64.0% and 44.0% of 25 streams sampled during spring 2014–2015. In streams with summer Al i concentrations less than 1.0 μmol/L, community richness, density, and biomass averaged 2.0 species, 444.2 fish/0.1 ha, and 1,924.4 g/0.1 ha, respectively, whereas density and biomass of Brook Trout Salvelinus fontinalis populations averaged 280.8 fish/0.1 ha and 1,384.0 g/0.1 ha, respectively. These findings identify defensible targets for biological recovery and show that Al i toxicity is not a major concern for fish assemblages in most streams during summer base flow periods but is potentially a serious issue for fish in as many as two‐thirds of streams during spring high flows. Though additional data are needed to address several limitations and information gaps, results from this study provide a sound foundation to gauge biological recovery, detect future effects of climatic stressors, and help ensure that functional stream ecosystems can be sustained or restored in parts of the Adirondacks.

New York↗
USGS2019

A natural‐origin steelhead population's response to exclusion of hatchery fish

It is asserted that reduction or elimination of hatchery stocking will increase natural‐origin salmon Oncorhynchus spp. and steelhead O. mykiss production. We conducted an analysis of steelhead population census data (1958–2017) to determine whether elimination of summer steelhead stocking in the upper Clackamas River in 1998 increased the productivity of natural‐origin winter steelhead. A Bayesian state–space stock–recruitment model was fitted to the adult steelhead data set, and productivity was estimated as a function of hatchery‐origin spawner abundance as well as other environmental factors. When used as a predictive variable in our model, the abundance of hatchery summer steelhead spawners (1972–2001) did not have a negative effect on winter steelhead recruitment. However, spill at North Fork Dam (the gateway to the upper Clackamas River basin) and the Pacific Decadal Oscillation (an index of ocean conditions) were both negatively associated with winter steelhead recruitment. Moreover, winter steelhead abundance in the upper Clackamas River basin failed to rebound to abundances observed in years prior to the hatchery program, and fluctuations in winter steelhead abundance were correlated with those of other regional winter steelhead stocks. Our assessment underscores the need for studies that (1) directly quantify the effects of hatchery fish on the production of natural‐origin salmon and steelhead, (2) empirically test published theories about mechanisms of hatchery fish impacts on natural‐origin populations, and (3) document population responses to major changes in hatchery programs.

Oregon↗
USGS2019

Using the Distinct Population Segment concept to protect fishes with low levels of genomic differentiation: conservation of an endemic minnow (Hitch, Lavinia exilicauda)

In the United States, the Endangered Species Act (ESA) of 1973 was enacted to conserve species which are endangered or threatened throughout all or a portion of their range. The definition of ‘species’ includes subspecies and distinct population segments (DPSs). In freshwater fishes, use of DPS designations has largely been restricted to salmonid fishes (Salmonidae), although the DPS concept is increasingly applied to other fishes as well. As more taxa approach threatened status, the difficult question becomes what to do when genetic evidence does not strongly support formal taxonomic designations (full species or subspecies). We examine the potential use of the DPS concept to protect fishes using the example of Hitch ( Lavinia exilicauda ), a cyprinid fish endemic to California. The Hitch is divided up into three formally described, geographically separated subspecies. However, genomic studies (RADseq), presented here with three independent analyses using a large data set, only weakly support subspecies designations. Results suggest population but not subspecies structure. Nevertheless, conventional taxonomic methods, strong contemporary isolation, the importance of protecting genetic diversity, and high cultural values still qualify all three designated subspecies for DPS status and demonstrate how taxa such as Clear Lake Hitch can warrant protection under the ESA.

Transactions of the American Fisheries Society↗
USGS2019

Assessment of operational and structural factors influencing performance of fish collectors in forebays of high-head dams

Providing efficient downstream passage is critical for improving populations of migratory fishes in impounded river systems. High‐head dams, such as those used for water storage or flood‐risk management, pose unique passage challenges requiring unique solutions. Systems to collect fish in dam forebays (“forebay collectors”) for transport to downstream release locations have been used at some high‐head dams in the western United States since the 1950s. Collection efficiency of these facilities has ranged from nearly 0% to 100%, suggesting the need for a better understanding of factors affecting performance in these complex environments if they are to be designed and deployed at new sites. We compiled information on environmental, structural, and performance characteristics of seven existing forebay collectors to quantify factors affecting their performance based on a meta‐analysis using a data set containing 52 separate collection estimates. Covariates included species type (steelhead Oncorhynchus mykiss, Chinook Salmon O. tshawytscha, Coho Salmon O. kisutch, and Sockeye Salmon O. nerka), collector inflow, collector entrance area, relative size of the dam forebay, and whether or not nets were used to enhance collection. We found that inflow, the use of lead nets, the size of the collector entrance area, the relative size of the dam forebay, and the interaction between collector entrance and forebay areas were significant predictors of collection performance. There was also evidence for differences between species. Chinook Salmon exhibited the lowest collection rates among the projects we examined, while steelhead collection rates were highest. These results provide guidance to design more efficient forebay collectors and improve the success of existing systems.

Oregon, Washington↗
USGS2019

Fish growth changes over time in a Midwestern U.S. lake

Growth of Walleyes Sander vitreus, Yellow Bass Morone mississippiensis, Common Carp Cyprinus carpio, and Black Bullheads Ameiurus melas was assessed in Clear Lake, Iowa, over several decades and in relation to environmental variables. Growth of Common Carp was positively correlated with phytoplankton concentration. Recent Black Bullhead growth was faster than in the 1950s and 1990s, which may be a consequence of their recent decline in abundance. Growth of Common Carp and Yellow Bass was faster in the 1940s than in more recent time periods. Relative to their entire range, Common Carp first‐year growth was below average, whereas length at later ages was above average. Walleye relative growth showed a similar pattern. The large changes in growth over several decades suggest that as the Clear Lake ecosystem continues to change, growth rates of its important fish species are also likely to continue changing.

Transactions of the American Fisheries Society↗
USGS2019

Vertical habitat use of adult Walleye conflicts with expectations from fishery-independent surveys

Stock assessments of Walleyes Sander vitreus in Lake Erie rely on a combination of suspended and bottom overnight gill‐net surveys to provide population and demographic information. However, the assumption that Walleyes undertake diel vertical migrations and become available to the suspended gill nets at night has never been validated. To understand how vertical habitat use affects the availability of Walleyes to fishery‐independent surveys, we compared individual behaviors observed by means of acoustic depth telemetry tags (20 individuals; 2013–2016) with catches in paired suspended and bottom gill‐net sets (273 paired sets; 2013–2016) used by management agencies. In contrast to our expectations and observations in other lakes, the mean depths for Walleyes most often occurred in the lower one‐half to one‐third of the water column, and at lake depths <25 m the fish tended to be close to the bottom. The relationship between fish and lake depth was dependent on year and season. At lake depths >15 m, Walleyes were found at shallower depths during stratified periods (i.e., summer) than during unstratified periods (autumn). They were also found at shallower depths in 2015 and 2016 than in 2013 and 2014. In paired autumn gill‐net surveys, (1) the overall proportion of Walleye catch was nearly equal in suspended and bottom gill nets and (2) the proportion of the catch in suspended gill nets declined with fish length. The pattern of decline was dependent on how deep the suspended net was fished and the year in which the data were collected. These results provide evidence that the suspended gill‐net surveys currently being used to assess Walleye demographics in Lake Erie are biased toward the capture small Walleyes, while bottom nets are biased toward the capture of large ones. Future telemetry investigations will be needed to understand whether these biases reflect differences in the depth of habitat between small and large Walleyes.

Lake Erie↗
USGS2019

Temperature–not flow–predicts native fish reproduction with Implications for climate change

Habitat alterations and introduction of nonnative fishes reduced the distributions of the Flannelmouth Sucker Catostomus latipinnis , Bluehead Sucker C. discobolus , and Roundtail Chub Gila robusta to less than 50% of their historical ranges. Climate change models generally predict decreased streamflows and increased water temperatures that may further affect these species. Understanding the effects of flow and water temperature on their life histories should lead to better assessments of climate change impacts on extant populations and more informed management for species conservation. Basinwide larval fish sampling and hatch dates derived from otolith daily increment counts showed that water temperature was the dominant environmental factor cueing reproduction in the upper White River basin, Colorado. Reproduction for all three species began in spring, occurring first at warmer, lower-elevation, downstream locations and progressing upriver to higher elevations as water temperatures increased. Warmer water temperatures in tributaries initiated earlier reproductive activity compared to adjacent cooler main-stem habitat. Presence of larvae in samples and estimated hatch dates demonstrated a distinct, predictable upstream progression of reproduction associated with warming water and clear upstream limits to reproduction for all three species. Larval presence and hatching dates revealed earlier reproductive activity in 2012 than in 2013, driven by lower flow and earlier stream warming. A regression model predicted stream temperature during fish spawning seasons under different climate change scenarios and showed expanded upstream limits of thermally suitable reproductive habitat and earlier reproduction for our study species. The long-term implications of climate change are unknown, but managers should strive to perpetuate the valuable and relatively pristine native fish community in the upper White River drainage as a vestige of those that formerly existed throughout the Colorado River basin.

Colorado↗
USGS2019

Integrating fish assemblage data, modeled stream temperatures, and thermal tolerance metrics to develop thermal guilds for water temperature regulation: Wyoming case study

Many streams are experiencing increased average temperatures due to anthropogenic activity and climate change. As a result, surface water temperature regulation is critical for preserving a diverse stream fish species assemblage. The development of temperature regulations has generally been based on laboratory measurements of individual species' thermal tolerances rather than community response to temperature in the field, despite multiple limitations of using laboratory data for this purpose. Using field data to develop temperature regulations may avoid some of the limitations of laboratory data, but the use of field data comes with additional challenges that prevent its widespread adoption. We used Wyoming stream fish assemblages as a case study to examine the feasibility of addressing the limitations of field and laboratory data through a hybrid approach that integrates both types of data to classify species into thermal guilds that can potentially inform regulatory standards. We identified coldwater, coolwater, and warmwater classes of sites with modeled mean August temperatures of <15.5, 15.5–19.9, and >19.9°C, respectively. We used species' associations with these temperature classes to place species into site‐groups. Finally, we used standardized laboratory measures of species' upper acute and chronic thermal tolerances to identify and reclassify species with unusual thermal distributions. Through this process we classified species into five thermal guilds that may be useful for surface water temperature regulation in Wyoming. Our approach addresses the limitations identified for field and laboratory data and demonstrates a framework that could be used for incorporating multiple types of data to develop temperature standards.

Wyoming↗
USGS2019

Growth, condition, and trophic relations of stocked trout in southern Appalachian mountain streams

Stream trout fisheries are among the most popular and valuable in the United States, but many are dependent on hatcheries to sustain fishing and harvest. Thus, understanding the ecology of hatchery‐reared trout stocked in natural environments is fundamental to management. We evaluated the growth, condition, and trophic relations of Brook Trout Salvelinus fontinalis , Brown Trout Salmo trutta , and Rainbow Trout Oncorhynchus mykiss that were stocked in southern Appalachian Mountain streams in western North Carolina. Stocked and wild (naturalized) trout were sampled over time (monthly; September 2012–June 2013) to compare condition and diet composition and to evaluate temporal dynamics of trophic position with stable isotope analysis. Relative weights ( W r ) of stocked trout were inversely associated with their stream residence time but were consistently higher than those of wild trout. Weight loss of harvested stocked trout was similar among species and sizes, but fish stocked earlier lost more weight. Overall, 40% of 141 stomachs from stocked trout were empty compared to 15% of wild trout stomachs ( N = 26). We identified a much higher rate of piscivory in wild trout (18 times that of stocked trout), and wild trout were 4.3 times more likely to consume gastropods relative to stocked trout. Hatchery‐reared trout were isotopically similar to co‐occurring wild fish for both δ 13 C and δ 15 N values but were less variable than wild trout. Differences in sulfur isotope ratios (δ 34 S) between wild and hatchery‐reared trout indicated that the diets of wild fish were enriched in δ 34 S relative to the diets of hatchery‐reared fish. Although hatchery‐reared trout consumed prey items similar to those of wild fish, differences in consumption or behavior (e.g., reduced feeding) may have resulted in lower condition and negative growth. These findings provide critical insight on the trophic dynamics of stocked trout and may assist in developing and enhancing stream trout fisheries.

North Carolina↗
USGS2019

Densities, diets, and growth rates of larval Alewife and Bloater in a changing Lake Michigan ecosystem.

Variability in abiotic and biotic factors during larval stages has profound impacts on fish recruitment. In Lake Michigan, where the composition of lower trophic levels has undergone considerable changes in the past decade, managers are concerned that fish recruitment could be negatively affected. We hypothesized that spatial variation in Lake Michigan larval fish density and growth can be explained by various environmental predictor variables. In July 2015, we sampled larval fish and zooplankton at 24 sites (distributed among eight transects) around Lake Michigan. We measured larval fish densities and estimated growth rates and diets of the two most abundant species: the Alewife Alosa pseudoharengus and Bloater Coregonus hoyi (prey fish that represented 89% and 4% of the total catch, respectively). Larval Alewife densities at a given site ranged from 0 to 42.57 larvae/100 m 3 , but no explanatory variables explained the variation. Alewife mean growth rate equaled 0.50 mm/d, and fish age and zooplankton density best explained growth variation across sites. Larval Bloater densities ranged from 0 to 1.16 larvae/100 m 3 , and mean growth rate was 0.21 mm/d. Across all sites, 67% of larval Alewife stomachs were empty, whereas only 16% of Bloater stomachs were empty. Larval fish growth rates observed in our study were at least 40% slower than those reported in previous decades for both Alewife and Bloater. Worsening prey environment for pelagic larvae, such as Alewife and Bloater, during the era of abundant dreissenid mussels could reduce the probability of strong year‐classes, which in turn may affect growth and survival of recreationally important salmonine predators.

Illinois, Michigan, Wisconsin↗
USGS2019

Energy depletion and stress levels of Sockeye Salmon migrating at the northern edge of their distribution

The physiological challenge for anadromous fish to migrate upriver is influenced by river temperature, but the impacts of river temperature can be difficult to predict due to an incomplete understanding of how temperature influences migration costs, especially in high‐latitude (>60°N) ecosystems. To assess temperature influences on migrating Pacific salmon Oncorhynchus spp., we measured heat shock protein 70 (HSP70), as an indicator of cellular stress, and energy content of Sockeye Salmon Oncorhynchus nerka throughout their upriver migration in the Pilgrim River, Alaska. Although HSP70 was elevated as fish moved to the spawning grounds and was higher in fish with low energy content, HSP70 did not increase with warmer river temperatures. We verified in an experiment that HSP70 abundance in Sockeye Salmon does respond to temperatures above 20.5°C. Over the 4 years of sampling, energy content decreased at similar rates as Sockeye Salmon moved upstream. We expected Sockeye Salmon energy levels would be lower when migrating in warmer river temperatures; however, we found higher energy levels occurred with higher temperatures in the Pilgrim River. We hypothesize that the relationship between temperature and energy content is due to river temperatures often occurring below optimal temperatures for migration. Lower temperatures could be energetically costly or reduce migration rates, both of which would result in lower energy content with cooler temperature. Understanding interactions between environmental drivers and physiological responses will help managers anticipate future changes for Sockeye Salmon at the northern edge of their distribution.

Alaska↗
USGS2019

Nonlethal detection of Asian fish tapeworm in the federally-endangered Humpback Chub using a molecular screening tool

Optimal spawning habitat of federally endangered Humpback Chub Gila cypha exists within the Little Colorado River; however, temperatures in the Little Colorado River are also ideal for proliferation of the invasive pathogenic Asian fish tapeworm Schyzocotyle acheilognathi . The current standard for positive identification of the parasite is necropsy and visual examination of the gut via microscopy, a methodology undesirable for assessing infection in endangered fishes. A swab taken at the rectum of the fish and analyzed using a novel DNA primer targeting the cestode cytochrome oxidase I subunit mtDNA gene region offers a convenient nonlethal sampling tool. To validate the nonlethal methodology, primer sensitivity (51.9%) and specificity (79.5%) were calculated by exposing captive fish to the parasite and comparing results using the lethal standard method (i.e., visual examination). Subsequently, we utilized this nonlethal methodology to address prevalence of infection and infection frequency across a range of size-classes in a wild population of Humpback Chub and addressed possible patterns and mechanisms of infection in the Little Colorado River. When wild Humpback Chub were screened for infection prevalence in spring 2015 (21.4%, n = 140) and fall 2015 (6.6%, n = 258), the relative frequency of infection was highest in juveniles and subadult fish (200–300 mm). Elevated levels of infection near the major spawning grounds of Humpback Chub in the Little Colorado River promote parasitic infection, which may continue to persist without treatment or actions to control infections. We demonstrated that rectal swabs, in conjunction with PCR and primer-specific identification, offer a time-efficient nonlethal method to detect infection of Asian fish tapeworm in an endangered fish.

Transactions of the American Fisheries Society↗
USGS2019

Environmental DNA assays for invasive populations of the Black Carp, Mylopharyngodon piceus, in North America

The Black Carp, Mylopharyngodon piceus, is an increasingly widespread invasive species in North America that threatens freshwater mussel populations. We developed four qPCR assays for detecting environmental DNA (eDNA) from these Black Carp populations. Assays were designed to target four mitochondrial DNA loci and were based on 34 complete mitochondrial genome sequences, including 29 generated in this study from samples obtained in three countries. Assays were validated for taxon specificity with in silico comparisons against archived DNA sequences and with in vitro tests of 41 DNA samples from Black Carp, as well as DNA samples from 30 non‐target fish species, all from the Mississippi River Basin. All four assays were able to detect the DNA of all Black Carp samples and did not exhibit any positive results with DNA from other tested species. Tests conducted in round‐robin fashion among three different laboratories found that all four assays were able to detect DNA at very low template concentrations (limits of detection = 3 copies/qPCR, limits of quantification = 16‐64 copies/qPCR) and, as part of in situ validation, were successful in detecting eDNA from Black Carp in aquaculture ponds. Despite some challenges with other attempts at in situ validation, the assays were also effective in detecting Black Carp eDNA in water samples from a drainage ditch in the upper reaches of the species’ range that was known to contain juvenile Black Carp, as well as in water samples from the Missisippi River and a connected oxbow lake in the lower reaches of the species range.

Transactions of the American Fisheries Society↗
USGS2019

New insights into the ecology of adfluvial Bull Trout and the population response to the Endangered Species Act in the North Fork Lewis River, Washington

Like many other salmonids, Bull Trout Salvelinus confluentus migratory life-history expressions are becoming increasingly rare. A critical step in effectively refining management and conservation strategies is a robust assessment of the effectiveness of such strategies and key biological information used in monitoring and recovery planning. To address this need, we integrated a variety of methods to evaluate the population demographics (abundance), vital rates (survival), and life-history characteristics (ageing, growth, spawning migrations and iteroparity) of an adfluvial Bull Trout population. We also employed our mark-recapture data to quantify if recruitment or adult survival had a greater contribution to population trends from year to year. Our results indicated Bull Trout spawning migrations vary with body size, as a considerable portion of smaller adults (<650 mm) did not spawn each year. Additionally, most spawning individuals made only one spawning migration, while <13% made three or more spawning migrations. Our abundance and survival data, which extends to the early 1990s, illustrated positive responses in survival and abundance following the protection of Bull Trout under the Endangered Species Act (1998). Over this period, we found high interannual variability in both survival and abundance, and adult survival (average = 0.45, SE = 0.04) was surprisingly lower than subadult individuals (average = 0.66, SE = 0.04), suggesting limitations at this important life stage. Our mark-recapture data also suggested the attributes driving the Bull Trout population trend (i.e., recruitment to the adult stage or adult survival) has varied through time, with declining trends in the relative contribution of recruitment. Our results provide new insights into the life-history patterns of adfluvial Bull Trout and can serve as a template to consider factors potentially limiting this and other native trout populations.

Washington↗
USGS2019

Evaluating the effects of barriers on Slimy Sculpin movement and population connectivity using novel sibship-based and traditional genetic metrics

Population genetics-based approaches can provide robust and cost-effective ways to assess the effects of potential barriers, including dams and road-stream crossings, on the passage and population connectivity of aquatic organisms. Determining the best way to apply and modify genetic tools for different species and situations is essential for making these genetics-based approaches broadly applicable to fisheries and aquatic habitat management. Here, we used multiple genetic approaches to assess the movement and population structure of Slimy Sculpin Cottus cognatus at two road-stream crossings in Michigan and one dam in Massachusetts, USA. We captured and genotyped individual sculpin and assessed movement and population connectivity by using (1) a sibship-based approach, where the presence and proportional distribution of siblings on either side of a barrier indicates population connectivity and the possible direction of movement (i.e., presumed movement from higher to lower proportions), and (2) two Bayesian genetic assignment approaches (STRUCTURE and BayesAss) to identify migrants across potential barriers based on individual population assignment probabilities. We also used traditional genetic metrics to assess within-population genetic variation and among-population genetic divergence. At all three locations, we found evidence for sculpin movement across the potential barrier based on sibship reconstruction, but small family sizes limited the ability of this approach to provide robust estimates of the rate and direction of movement. At two sites, a lack of genetic differentiation between above- and below-barrier populations limited the effectiveness of the genetic assignment methods for identifying possible migrants. At the third site, reduced upstream allelic diversity and effective number of breeders resulted in high genetic differentiation (FST) between above- and below-barrier populations, and both sibship and genetic assignment methods provided strong evidence of limited connectivity and bias against upstream movement. Overall, combining approaches and metrics may help overcome the limitations of any one method and maximize the value of datasets for genetics-based monitoring and assessment.

Massachusetts, Michigan↗
USGS2019

Effects of multiple nonnative fish on an imperiled cyprinid, Hornyhead Chub

Nonnative fish can have substantial negative effects on the abundance and distribution of native fishes through predation and competition. Nonnative predators are of particular interest because they represent novel threats to native prey species that are not adapted to their presence. Prey species with limited distributions or population sizes may be particularly vulnerable to the effects of nonnative predators. In the Laramie River, four nonnative predators—Brown Trout Salmo trutta , Rainbow Trout Oncorhynchus mykiss , Brook Trout Salvelinus fontinalis, and Smallmouth Bass Micropterus dolomieu are present along with a state‐imperiled population of Hornyhead Chub Nocomis biguttatus . The abundance of Hornyhead Chub has declined with increasing abundance of nonnative predators, with the probability of occurrence of Hornyhead Chub dropping drastically when Smallmouth Bass were present. All four nonnative species preyed on native cyprinids, but Smallmouth Bass relied most heavily on fish as a prey item. Isotopic niche overlap occurred between Hornyhead Chub and all of the nonnative predator species. Our results demonstrate that nonnative predators have the potential to negatively affect the abundance and distribution of Hornyhead Chub through the mechanisms of predation and competition, and predator identity is important in determining the extent of effects. Smallmouth Bass are a greater concern than nonnative salmonids because of their more piscivorous behavior, and their recent upstream expansion may be limiting the downstream distribution of Hornyhead Chub in the Laramie River.

Wyoming↗