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Results for “Journal of Comparative Physiology A”

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USGS2025

3D viscoelastic models of slip-deficit rate along the Cascadia subduction zone

Interseismic deformation in the Pacific Northwest is constrained by the horizontal crustal velocity field derived from the Global Positioning System (GPS) in addition to vertical rates derived from GPS, leveling, and tide gauge measurements. Such measurements were folded in to deformation models of fault slip rates as part of the 2023 National Seismic Hazard Model (NSHM) update. Here I build upon one of the contributing models, the viscoelastic earthquake-cycle model of Pollitz [2022]. This model permits inclusion of effects of time-dependent viscoelastic relaxation within earthquake cycles (i.e., ‘ghost transients’) and laterally variable elastic and/or ductile material properties. I lever-age these capabilities to incorporate the Cascadia megathrust into Western U.S.-wide deformation models in which crustal fault slip rates are estimated simultaneously with slip deficit rates along the interplate boundary between the descending Juan de Fuca plate and North American plate. This effort includes construction of a margin-wide model of viscoelastic structure founded on the Slab 2.0 model and probes different models of the ductile properties of the surrounding oceanic asthenosphere, continental lower crust, and mantle asthenosphere. This results in new estimates of the distribution of slip deficit rate along the ∼ 1000 km long margin, highlights the importance of correcting for glacial-isostatic adjustment effects, and permits assessment of sensitivity of results to assumed ductile properties.

California, Oregon, Washington↗
USGS2000

Storm impact scale for barrier islands

A new scale is proposed that categorizes impacts to natural barrier islands resulting from tropical and extra-tropical storms. The proposed scale is fundamentally different than existing storm-related scales in that the coupling between forcing processes and the geometry of the coast is explicitly included. Four regimes, representing different levels of impact, are defined. Within each regime, patterns and relative magnitudes of net erosion and accretion are argued to be unique. The borders between regimes represent thresholds defining where processes and magnitudes of impacts change dramatically. Impact level 1 is the 'swash' regime describing a storm where runup is confined to the foreshore. The foreshore typically erodes during the storm and recovers following the storm; hence, there is no net change. Impact level 2 is the 'collision' regime describing a storm where the wave runup exceeds the threshold of the base of the foredune ridge. Swash impacts the dune forcing net erosion. Impact level 3 is the 'overwash' regime describing a storm where wave runup overtops the berm or, if present, the foredune ridge. The associated net landward sand transport contributes to net migration of the barrier landward. Impact level 4 is the 'inundation' regime describing a storm where the storm surge is sufficient to completely and continuously submerge the barrier island. Sand undergoes net landward transport over the barrier island; limited evidence suggests the quantities and distance of transport are much greater than what occurs during the 'overwash' regime.

Journal of Coastal Research↗
USGS2025

Borehole geophysical time-series logging to monitor passive ISCO treatment of residual chlorinated-ethenes in a confining bed, NAS Pensacola, Florida

In-situ chemical oxidation (ISCO) is a common method to remediate chlorinated ethene contaminants in groundwater. Monitoring the effectiveness of ISCO can be hindered because of insufficient observations to assess oxidant delivery. Advantageously, potassium permanganate, one type of oxidant, provides the opportunity to use its strong electrical signal as a surrogate to track oxidant delivery using time-series borehole geophysical methods, like electromagnetic (EM) induction logging. Here we report a passive ISCO (P-ISCO) experiment, using potassium permanganate cylinders emplaced in boreholes, at a chlorinated ethene contamination site, Naval Air Station Pensacola, Florida. The contaminants are found primarily at the base of a shallow sandy aquifer in contact with an underlying silty-clay confining bed. We used results of the time-series borehole logging collected between 2017 and 2022 in 4 monitoring wells to track oxidant delivery. The EM-induction logs from the monitoring wells showed an increase in EM response primarily along the contact, likely from pooling of the oxidant, during P-ISCO treatment in 2021. Interestingly, concurrent natural gamma-ray (NGR) logging showed a decrease in NGR response at 3 of the 4 wells possibly from the formation of manganese precipitates coating sediments. The coupling of time-series logging and well-chemistry data allowed for an improved assessment of passive ISCO treatment effectiveness.

Florida↗
USGS2025

Integrating marine historical ecology into management of Alaska’s Pacific cod fishery for climate readiness

The Pacific cod ( Gadus macrocephalus ) fishery was closed in 2020 after a rapid decline in biomass caused by the marine heat waves of 2014–2019. Pacific cod are exceptionally thermally sensitive and management of this fishery is now challenged by increasingly unpredictable climate conditions. Fisheries monitoring is critical for climate readiness, but short-term monitoring data may be inadequate for recognizing and anticipating change under rapid climate changes. We propose an interdisciplinary, marine historical ecology framework that looks to long-term records (local and traditional knowledge, history, archaeology, and paleoclimatology) to capture a long range of ecological variability and provide historical context for management. In order to connect to contemporary fisheries management, this framework must be built on a common vocabulary and an understanding of the key metrics used in fisheries stock assessments. Here, we propose metrics derived from Pacific cod stock assessment and synthesize information relevant to understanding the effects of past warming periods on cod populations across the Gulf of Alaska and Bering Sea. This case study provides a framework for thinking about how to use these historical records in the context of fisheries management under rapidly changing climate conditions.

Alaska↗
USGS2026

A process-based model for forecasting wave runup along the coast of Georgia

Wave runup is an important nearshore process that impacts total water level, sediment transport, and coastal design. Current methods for forecasting wave runup implement an empirical model that considers offshore wave height, wave period, and generalized beach slope. In this study, the authors generated wave runup forecasts from offshore wave conditions and a system of polynomial equations derived from numerical simulations at three different still water datums for each beach profile. They developed a process-based methodology that incorporated site-specific cross-shore topobathy into the phase-resolving numerical model. A comparison between the system of equations, deterministic hydrodynamic simulations, and observed high-water marks was made using Hurricanes Matthew (2016) and Irma (2017) for 12 cases, and it showed that the polynomials were capable of being consistent with the results from full simulation runs, while not requiring hours of runtime when a forecast was needed—the differences between the polynomial and the observed high water marks ranged from 3 to 32 cm for the Irma hindcast and 9–70 cm for Matthew. Then, using forcings from Hurricanes Ian and Nicole (2022), the model predicted the occurrence of dune collision, overwash, and inundation for the coast of Georgia and suggested that wave runup was impacted by the still water level and local topobathy.

Georgia↗
USGS2026

Long-term monotonic trends in water budget components in the contiguous United States: Insights from two hydrologic models

Characterizing changes to water availability for domestic, industrial, agricultural, and other uses is essential to support water management. To better quantify these changes, the U.S. Geological Survey and National Science Foundation National Center for Atmospheric Research produced two hydrologic models simulating water budget components from 1980 to 2021 over the contiguous United States (CONUS). Both hydrologic models were driven by a common atmospheric forcing dataset and aggregated to common spatial and temporal scales, which enables a novel evaluation of congruency between the models. We present annual and seasonal trends in six water budget components (precipitation, evapotranspiration, streamflow, groundwater recharge, soil saturation, and snow water equivalent) based on the Mann–Kendall test for monotonic trend and Theil-Sen slope estimate for the water year 1983–2021 period for ~86,000 catchments in CONUS. Additional components and metrics from our analysis pipeline are available in an associated published dataset, which contains more than 46 million trend results. The water budget trends showed broad agreement with prior observational and modeling studies that indicate increasing trends in the northeast and decreasing trends in southwestern CONUS. We found the seasonal variability in water budget trends was greatest in the southern, central, and northwest CONUS. These findings support integrated trend assessments when coupled with trends in water quality and use.

Contiguous United States↗
USGS2025

Controls on water quality below a reclaimed surface coal mine, southeastern Montana

Coal mining and reclamation can have a profound influence on hydrogeologic systems, with clear consequences for groundwater quality, yet their long-term influence on downgradient water quality over time following reclamation is less well documented. Geochemical trends were evaluated in water quality downgradient of a fully reclaimed landscape at the former Big Sky Mine in the Rosebud Creek watershed (southeastern Montana, USA), over a 3-year period (2020–2022), including bond release in 2022. Within 6 km downgradient from the reclaimed area, sulfate concentrations decreased from approximately 3500 to 1800 mg l −1 within the Miller Coulee alluvial aquifer. Major ions, δ 34 S SO4 values, and residence time tracers suggest that the observed decreases in sulfate concentration result from a combination of dilution by mixed-age inflows and incomplete transit of the high salinity plume from the mine boundary. Both bedrock and alluvial aquifers of the Rosebud Creek corridor contained contributions of millennia-old regional groundwater, which may serve to mitigate mine-derived high salinity waters. Rosebud Creek, which traverses the outflow zone of Miller Coulee in the study area, exhibited high sulfate concentrations during low flows and consistent downgradient increases in sulfate concentration. The possibility of plume dynamics in Miller Coulee suggests that the greatest water quality impacts may not yet have reached Rosebud Creek.

Montana↗
USGS2024

Exploring the dynamic interactions between the Southern San Andreas Fault and a normal fault under the Salton Sea

We investigate the dynamic interactions between the Southern San Andreas Fault (SSAF) and a proximal normal fault (NF) beneath the Salton Sea in southern California. The NF, positioned near the SSAF terminus at Bombay Beach, exhibits 11–15 displacement events across 14 stratigraphic sequences, with a range of 0.2–1.4 m of vertical offset since ∼2–3 ka. Notably, four of these events may align temporally with SSAF earthquakes, raising questions about the possible interplay between the two faults. Utilizing dynamic rupture models, we analyze the coseismic interactions between the SSAF and NF, addressing under what conditions the SSAF induces slip on the NF. Our findings reveal that a suite of SSAF ruptures, particularly those propagating from north to south, can trigger slip on the normal fault and replicate observed vertical offsets. If the SSAF extends beneath the Salton Sea, earthquakes originating south of the NF intersection are less likely to trigger normal fault slip, although we cannot exclude this possibility. Some SSAF ruptures do not trigger discernible slip on the NF, rendering such events undetectable in the stratigraphic record. Our research contributes toward discussions regarding the seismic hazard in southern California, shedding light on the interplay between the SSAF and NF.

California↗
USGS2024

A new water temperature modeling approach to predict thermal habitat suitability for nonnative cichlids in Florida rivers

As global temperatures increase, the spatiotemporal arrangement of thermal habitats in Florida rivers may shift, creating the potential for greater dispersal and establishment of nonnative tropical freshwater fishes. To understand how water temperature changes may affect the spatial distribution of these nonnative species, more effective water temperature prediction models are necessary. Currently, most models employ either a generalized air–water temperature relationship or require expensive and complicated tools to measure hydrometeorological factors (e.g. groundwater input). Thus, we developed a novel modeling approach that is accurate, accessible, and cost-effective in allowing fisheries managers to project water temperatures in rivers across Central and North Florida. To characterize the potential for nonnative fishes to spread northward, we evaluated two hardy and abundant species currently found primarily in South Florida: Mayan Cichlid ( Mayaheros urophthalmus ) and Oscar ( Astronotus ocellatus ). Our results show an increase in thermally suitable winter days for both species in 10 of 11 rivers studied, consistent with predicted water temperature warming under 16 climate-change scenarios spanning different levels of air temperature warming (+1 °C, +2 °C, +3 °C, +4 °C) and precipitation/groundwater thermal sensitivity (0, 0.33, 0.66, 1). Considering resource limitations, fisheries managers can use our water temperature modeling approach to predict effects of climate change on Mayan Cichlid and Oscar survival, growth, and dispersal and take actions to manage potential northward movement of these species.

Florida↗
USGS2024

Afterslip and creep in the rate-dependent framework: Joint inversion of borehole strain and GNSS displacements for the Mw 7.1 Ridgecrest earthquake

The elusive transition toward afterslip following an earthquake is challenging to capture with typical data resolution limits. A dense geodetic network recorded the Mw 7.1 Ridgecrest earthquake, including 16 Global Navigation Satellite System (GNSS) stations and 3 borehole strainmeters (BSM). The sub-nanostrain precision and sub-second sampling rate of BSMs bridges a gap between conventional seismologic and geodetic methods, exemplified by atypical postseismic shear strain reversals observed at nearfield (<2 km) station B921 that remain unexplained. We jointly invert GNSS displacements and BSM strains for coseismic and postseismic slip spanning hours to months over 7 independent periods. Cosiesmically, our model resolves the largest slip magnitudes of up to 6.6 m on the mainshock rupture plane, with similar patterns to other inferred slip distributions. The foreshock fault appears to slip coincidently with mainshock, revealing potential asperities activated during the preceding Mw 6.4 event. Postseismically, the best-fitting models adhere to mechanical rate-and-state expectations of logarithmically decaying slip adjacent to the coseismic rupture terminus, and where deep rheologic conditions favor creep. Most spatial variation occurs in the early postseismic timeframe (<1–2 weeks), with evidence for regional rheologic control and static stress dependence. Triggered creep on the neighboring Garlock Fault unexpectedly persists for >178 days—further highlighting the importance of fault networks in postseismic stress redistribution, critical to assessing future hazard.

Journal of Geophysics Research↗
USGS2026

PFAS remediation in a bioelectrochemical system inoculated with the west branch consortium (WBC-2)

Groundwater contamination by per - and polyfluoroalkyl substances (PFAS) poses a persistent environmental and public health concern. This study evaluates a two-chambered bioelectrochemical system (BES) inoculated with the West Branch Consortium (WBC-2) for PFAS remediation. Under an applied cathodic potential of −450 mV (versus Ag/AgCl), the BES with active WBC-2 achieved >99.0% perfluorooctanesulfonic acid (PFOS) removal within 21 days in deionized water with culture medium and > 98.9% removal of PFOS, perfluorooctanoic acid (PFOA), perfluorohexanoic acid (PFHxA), and perfluorohexanesulfonic acid (PFHxS) in contaminated groundwater after 102 days. Intermediate formation (e.g., PFOA, 6:2 fluorotelomer sulfonate (6:2 FTS), perfluoropropionic acid (PFPrA), perfluorobutanoic acid (PFBA)) and background-corrected fluoride release were consistent with PFOS transformation under anaerobic reducing conditions potentially involving defluorination. Following repeated PFOS spikes (100 μg/L on Days 0, 50, and 399), PFOA, PFPrA, and PFBA accumulated over 664 days. Despite being the dominant accumulated compound, PFOA accounted for <1.8% of the total spiked PFOS mass. Minimal PFOS transformation occurred in controls without active WBC-2, highlighting the importance of microbial metabolism. Biofilm analysis revealed dense colonization of rod-shaped bacteria on carbon fiber brushes. Enrichment of Bacillus , Agrobacterium , and other low-abundance taxa suggests selective adaptation to BES and PFAS conditions. These findings highlight BES driven by electrochemically stimulated microbial activity as a promising strategy for PFAS remediation.

Journal of Water Process Engineering↗
USGS2025

Systematic approach to prioritize wells for effective groundwater monitoring and management in the Arkansas Headwaters Basin, Colorado, USA

Study region The Arkansas Headwaters Basin, an intermountain basin in the Southern Rocky Mountains of North America. Study focus Our specific focus is choosing a set of wells to support a possible future regional groundwater-surface water model that would support water management. We present a three-step process using multiple criteria to score, predict, and choose prioritized wells that capture the full distribution of data including extremes. The three-step process provides accessible visualizations, fiscally efficient well prioritization, and screening useful for subsequent groundwater modeling. The novelty of the proposed methodology is the systematic approach integrating a scoring and a predictive approach to support a selection path. The systematic approach may be broadly adapted for other basins. New hydrological insights for the region Understanding regional hydrology hinges on efficient collection of hydrologic data that captures the relevant dynamics including extremes. The present study, a case study for a particular basin in the Southern Rocky Mountains, is the first use of a scripted (R software) strategy to select an economical and representative set of monitoring wells. Our findings suggest caution when using proximity as a proxy for correlation, because proximal wells in the same geologic formation and similar depths are not always correlated. In the Arkansas Headwaters Basin, subsurface geology may be less influential on groundwater elevations than broader hydrologic influences, such as regional drought.

Colorado↗
USGS2024

Cross-fade sampling: Extremely efficient Bayesian inversion for a variety of geophysical problems

This paper introduces cross-fade sampling, a computationally efficient Markov Chain Monte Carlo simulation method that uses a semi-analytical approach to quickly solve Bayesian inverse problems that do not themselves have an analytical solution. Cross-fading is efficient in two ways. First, it requires fewer samples to obtain the same quality simulation of the target probability density function (PDF). Secondly, it is much faster to evaluate the posterior probability of each sample than conventional sampling methods for simulating Bayesian posterior PDFs. Conventional methods require evaluating the prior probability (which describes your a priori constraints) and data likelihood (which describes the fit between the observations and the predictions of the model) for each sample model. However, cross-fading does not require evaluating the data likelihood, meaning that ‘big data’ can be fit with zero additional computational cost. Further, the cross-fading approach can be used to calculate the marginal likelihood associated with a model design, facilitating model comparison and Bayesian model averaging. Topics covered in this paper include derivation of the cross-fade approach and how it can be used to simulate Bayesian posterior PDFs and compute the marginal likelihood, discussion of the class of problems to which cross-fading can be applied (with examples from earthquake statistics, earthquake ground motion modelling, volcanic eruption forecasting, and finite fault slip modelling), demonstration of efficiency relative to existing sampling methods and discussion of how cross-fading can be used to account for prediction errors (i.e. epistemic errors) as part of the geophysical inverse problem.

Geophysical Journal International↗
USGS2026

Assessing future hydrologic extremes using an integrated hydrology and river operations model in the Russian River watershed

Study region The Russian River watershed, situated in coastal, northern California, experiences hydrologic extremes, including periodic droughts and flooding. Water managers are working to maintain sustainable water supplies and environmental flows, while mitigating flood risks. Study focus This paper introduces an integrated hydrology and river operations model for the Russian River watershed. This model is distinct from models in previous studies because it represents surface-groundwater interactions and uses climate forcings to estimate dynamic water use demands that are superimposed onto both reservoir operations and water supply constraints. The model was used to examine three historical (1990–2015) and eight future (2016–2099) water use and climate change scenarios. New hydrological insights for the region The direct connection between streams and aquifers facilitated both annual aquifer replenishment by high winter streamflows and streamflow depletion by groundwater wells (19 % of pumped groundwater in alluvial aquifers from stream leakage) during critical low flow periods. Simulated streamflow changes included 59 % longer and 54 % more severe streamflow droughts, 26 % lower seasonal low streamflows, and up to 125 % higher peak streamflows, averaged over future climate and water use scenarios, suggesting increased future flood and water availability risks. Results showed the importance of reservoir operations for mitigating the impacts of increased hydroclimatic volatility, despite a decrease in reservoir reliability at Lake Mendocino, suggesting that reservoir management may be used to decrease future risks.

California↗
USGS2026

Ringtail (Bassariscus astutus) survival in southwestern Oregon

The effective conservation and management of small carnivore populations requires understanding species’ life-history traits and identifying important vital rates that drive population trajectories. However, many of these species are rare or elusive and of state or federal conservation concern, and demographic information is often lacking and difficult to obtain. At the northern limit of their range in Oregon, USA, ringtail ( Bassariscus astutus ) occupy mid-elevation forests and are a species of conservation concern because of their limited distribution and suspected low density. We initiated a radio-telemetry study in 2020 to estimate monthly and annual survival of ringtail in southwest Oregon. We monitored 26 ringtail from November 2020 to October 2022 and estimated survival rates using a known-fate framework and Program MARK. Model-averaged monthly survival estimates ranged from lows of 0.963 (SE = 0.022, 95% CI = 0.887–0.988) in spring (Feb–May) of 2021 to highs of 0.980 (SE = 0.018, 95% CI = 0.889–0.997) in summer (Jun–Oct) of 2022. Model-averaged estimates of annual survival were 0.695 (SE = 0.176, 95% CI = 0.310–0.920) during 2020–2021 and 0.728 (SE = 0.168, 95% CI = 0.336–0.934) during 2021–2022. Predation was the leading cause of mortality, but notably, no mortalities could be attributed to avian predation. Survival rates were much higher within forested landscapes in Oregon than for populations in the southwestern United States, which may have implications for regional conservation and management strategies.

Oregon↗
USGS2024

Limited preservation of strike-slip surface displacement in the geomorphic record

Offset geomorphic markers are commonly used to interpret slip history of strike-slip faults and have played an important role in forming earthquake recurrence models. These data sets are typically analyzed using cumulative probability methods to interpret average amounts of slip in past earthquakes. However, interpretation of the geomorphic record to infer surface slip history is complicated by slip variability, measurement uncertainty, and modification of offset features in the landscape. To investigate how well geomorphic data record surface slip, we use offset measurements from recent strike-slip surface ruptures ( n = 39), faults with geomorphic evidence of multiple strike-slip earthquakes ( n = 29), and synthetic slip distributions with added noise ( n > 10,000) to examine the constraints of the geomorphic record and the underlying assumptions of the cumulative offset probability distribution analysis method. We find that the geomorphic record is unlikely to resolve more than two paleo-slip distributions, except in specific cases with low slip variability, high slip-per-event, and semiarid climate. In cases where site-specific conditions allow for interpretation of more than two earthquakes, lateral extrapolation along a fault is not straightforward because on-fault displacement and distributed deformation may be spatially variable in each earthquake. We also find that average slip in modern earthquakes is adequately recovered by probability methods, but the reported prevalence of strike-slip faults with characteristic slip history is not supported by geomorphic data. We also propose updated methods to interpret slip history and construct uncertainty bounds for paleo-slip distributions.

Journal of Geophysical Research: Solid Earth↗
USGS2025

Assessing earthquake risks to lifeline infrastructure systems in the United States

The security and economic stability of the United States rely heavily on robust lifeline infrastructure systems and yet the risks to such systems are seldom quantified at the national scale. For example, while earthquake risks to buildings in the United States have been investigated at the national scale regularly, such risks to gas pipelines have rarely been investigated nationally. In this paper, we use examples from two critical infrastructure sectors to demonstrate (1) the nature of earthquake risks to lifeline infrastructure systems, (2) complexities involved in regional seismic risk assessments, and (3) how such risks change with time. We found that bridge risks can be underestimated by at least 64 % when viewed from repair costs instead of traffic demands and that regional risks can be underestimated by 19 % when spatial correlations of ground motion are ignored. Further, exceedance of traffic demand can be 50 times more likely to occur when viewed at the regional scale than when viewed at an individual bridge. Similarly, exceedance of repairs can be 180 times more likely to occur when viewed at the pipeline network level than at a segment-specific level. Finally, sensitivity analyses with the 2018 and 2023 USGS National Seismic Hazard Models indicate an increase in bridge risk of at least 24 % and an increase in exposed gas pipeline mileage of 43 %. The evolution of risks, complexities involved in assessments, and limited resources jointly underscore the need for more routine updates to nationwide seismic risk assessments of lifeline systems in the United States.

International Journal of Critical Infrastructure P↗
USGS2024

RegionGrow3D: A deterministic analysis for characterizing discrete three-dimensional landslide source areas on a regional scale

Regional-scale characterization of shallow landslide hazards is important for reducing their destructive impact on society. These hazards are commonly characterized by (a) their location and likelihood using susceptibility maps, (b) landslide size and frequency using geomorphic scaling laws, and (c) the magnitude of disturbance required to cause landslides using initiation thresholds. Typically, this is accomplished through the use of inventories documenting the locations and triggering conditions of previous landslides. In the absence of comprehensive landslide inventories, physics-based slope stability models can be used to estimate landslide initiation potential and provide plausible distributions of landslide characteristics for a range of environmental and forcing conditions. However, these models are sometimes limited in their ability to capture key mechanisms tied to discrete three-dimensional (3D) landslide mechanics while possessing the computational efficiency required for broad-scale application. In this study, the RegionGrow3D (RG3D) model is developed to broadly simulate the area, volume, and location of landslides on a regional scale (≥1,000 km 2 ) using 3D, limit-equilibrium (LE)-based slope stability modeling. Furthermore, RG3D is incorporated into a susceptibility framework that quantifies landsliding uncertainty using a distribution of soil shear strengths and their associated probabilities, back-calculated from inventoried landslides using 3D LE-based landslide forensics. This framework is used to evaluate the influence of uncertainty tied to shear strength, rainfall scenarios, and antecedent soil moisture on potential landsliding and rainfall thresholds over a large region of the Oregon Coast Range, USA.

Journal of Geophysical Research: Earth Surface↗