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Hydrogeology Journal in 2002

Hydrogeology Journal appeared in six issues containing a total of 674 pages and 47 major articles, including 22 Papers and 24 Reports, as well as Technical Notes and Book Reviews. The final issue of 2002 also contained the annual volume index. Hydrogeology Journal (HJ) is an international forum for hydrogeology and related disciplines. Authors in 2002 were from about 30 countries. Articles advanced hydrogeologic science and described hydrogeologic systems in many regions worldwide. These articles focused on 22 countries: Afghanistan, Argentina, Australia, Austria, Belgium, Brazil, Canada, China, India, Israel, Japan, Jordan, Mexico, New Zealand, Nigeria, Portugal, Qatar, Switzerland, Syria, Turkey, UK, and the USA. The Guest Editors of the 2002 HJ theme issue on "Groundwater Recharge", Bridget R. Scanlon and Peter G. Cook, assembled a highly relevant and sought-after collection of papers from eminent authors on wide-ranging aspects of the subject.

Hydrogeology Journal↗

Editors' message: Hydrogeology Journal in 2003

Hydrogeology Journal appeared in six issues containing a total of 710 pages and 48 major articles, including 31 Papers and 14 Reports, as well as some Technical Notes and Book Reviews. The number of submitted manuscripts continues to increase. The final issue of 2003 also contained the annual volume index. Hydrogeology Journal ( HJ ) is an international forum for hydrogeology and related disciplines and authors in 2003 were from about 28 countries. Articles advanced hydrogeologic science and described hydrogeologic systems in many regions worldwide. These articles focused on a variety of general topics and on studies of hydrogeology in 24 countries: Afghanistan, Algeria, Argentina, Australia, Bangladesh, Belgium, Canada, Chile, China, Denmark, France, India, Italy, Mexico, Netherlands, New Zealand, Nigeria, Norway, Portugal, Russia, South Africa, Switzerland, Turkey, and U.S.A. The Guest Editor of the 2003 HJ theme issue on “Hydromechanics in Geology and Geotechnics”, Ove Stephansson, assembled a valuable collection of technical reviews and research papers from eminent authors on important aspects of the subject area.

Hydrogeology Journal↗

Tsunami warnings: Understanding in Hawai'i

The devastating southeast Asian tsunami of December 26, 2004 has brought home the destructive consequences of coastal hazards in an absence of effective warning systems. Since the 1946 tsunami that destroyed much of Hilo, Hawai‘i, a network of pole mounted sirens has been used to provide an early public alert of future tsunamis. However, studies in the 1960s showed that understanding of the meaning of siren soundings was very low and that ambiguity in understanding had contributed to fatalities in the 1960 tsunami that again destroyed much of Hilo. The Hawaiian public has since been exposed to monthly tests of the sirens for more than 25 years and descriptions of the system have been widely published in telephone books for at least 45 years. However, currently there remains some uncertainty in the level of public understanding of the sirens and their implications for behavioral response. Here, we show from recent surveys of Hawai‘i residents that awareness of the siren tests and test frequency is high, but these factors do not equate with increased understanding of the meaning of the siren, which remains disturbingly low (13%). Furthermore, the length of time people have lived in Hawai‘i is not correlated systematically with understanding of the meaning of the sirens. An additional issue is that warning times for tsunamis generated locally in Hawai‘i will be of the order of minutes to tens of minutes and limit the immediate utility of the sirens. Natural warning signs of such tsunamis may provide the earliest warning to residents. Analysis of a survey subgroup from Hilo suggests that awareness of natural signs is only moderate, and a majority may expect notification via alerts provided by official sources. We conclude that a major change is needed in tsunami education, even in Hawai‘i, to increase public understanding of, and effective response to, both future official alerts and natural warning signs of future tsunamis.

Natural Hazards↗

The petrology of dispersed organic matter in sedimentary rocks: Review and update

Organic petrology developed from coal petrology, and, in the 1960s, it began to be applied to the study of dispersed organic matter (DOM) in sedimentary rocks other than coal. Over the last few decades, the petrology of DOM has been used to characterize organic matter in sedimentary basins with an emphasis on fossil fuel resource exploration. Today, due to the global research shift on topics related to climate, organic petrology has expanded into new application areas, such as geothermal exploration, biological carbon storage (biochar), disposal, and management of radioactive waste. From the publication of the International Handbook of Coal Petrology (mid-20th century) to the present day, a large number of standards, books, and articles have been published as a result of the work of organic petrographers and petrologists around the world and efforts of the International Committee for Coal and Organic Petrology (ICCP) and The Society for Organic Petrology (TSOP) to promote the study of organic petrology. The current fundamentals and standards of organic petrology provide the international scientific community with well-informed guidance and recommendations to promote in-depth research. However, this information is currently widely scattered, leading to discrepancies in methodology and terminology. Therefore, this paper aims to present a comprehensive review of the main analytical standard test methods and techniques currently used in the petrology of DOM under reflected white light and UV and blue-light excitation, and to provide an efficient and well-defined reference guide. Furthermore, considering the important role of the ICCP in the development of organic petrology since the 1950s, a brief review of the ongoing activities of ICCP dealing with DOM is also presented.

International Journal of Coal Geology↗

Potential spread of cheatgrass (Bromus tectorum) by feral horses (Equus ferus caballus) in Western Colorado

The invasive grass cheatgrass ( Bromus tectorum L.) presents major challenges for land management and habitat conservation in the western United States. Feral horses (Equus ferus caballus) have become overabundant in some areas of the West and can impact fragile semiarid ecosystems. Amid ongoing efforts to control cheatgrass in the Great Basin, we conducted a study to determine if feral horses contribute to the spread of cheatgrass through distribution via their feces. We collected feral horse fecal samples from Little Book Cliffs Herd Management Area in western Colorado in 2014. Fecal samples were dried, and 20 from each of 3 collection sessions were cultivated to examine germination success. Six species germinated from 18 samples (30%; mostly one plant per sample where germination occurred), including cheatgrass from 8% of samples. In a separate study we examined the diet of this same horse population using fecal plant DNA barcoding. Plant species that germinated were rare in the diet and germinated from fewer samples than expected relative to their detection in the diet. Our results suggest that feral horses could be contributing to cheatgrass propagation. Native ungulates and domestic cattle also have this potential. Although management of all large ungulates is necessary to mitigate cheatgrass spread, control of feral horse numbers is particularly necessary.

Colorado↗

Chemical weathering in a tropical watershed, Luquillo Mountains, Puerto Rico: II. Rate and mechanism of biotite weathering

Samples of soil, saprolite, bedrock, and porewater from a lower montane wet forest, the Luquillo Experimental Forest (LEF) in Puerto Rico, were studied to investigate the rates and mechanisms of biotite weathering. The soil profile, at the top of a ridge in the Rio Icacos watershed, consists of a 50–100-cm thick layer of unstructured soil above a 600–800 cm thick saprolite developed on quartz diorite. The only minerals present in significant concentration within the soil and saprolite are biotite, quartz, kaolinite, and iron oxides. Biotite is the only primary silicate releasing significant K and Mg to porewaters. Although biotite in samples of the quartz diorite bedrock is extensively chloritized, chlorite is almost entirely absent in the saprolite phyllosilicates. Phyllosilicate grains are present as 200–1000 μm wide books below about 50 cm depth. X-ray diffraction (XRD) and electron microprobe analyses indicate that the phyllosilicate grains contain a core of biotite surrounded by variable amounts of kaolinite. Lattice fringe images under transmission electron microscope (TEM) show single layers of biotite altering to two layers of kaolinite, suggesting dissolution of biotite and precipitation of kaolinite at discrete boundaries. Some single 14-Å layers are also observed in the biotite under TEM. The degree of kaolinitization of individual phyllosilicate grains as observed by TEM decreases with depth in the saprolite. This TEM work is the first such microstructural evidence of epitaxial growth of kaolinite onto biotite during alteration in low-temperature environments. The rate of release of Mg in the profile, calculated as a flux through the soil normalized per watershed land area, is approximately 500 mol hectare −1 yr −1 (1.6 × 10 −9 mol Mg m soil −2 s −1 ). This rate is similar to the flux estimated from Mg discharge out the Rio Icacos (1000 mol hectare −1 yr −1 , or 3.5 × 10 −9 mol Mg m soil −2 s −1 ), indicating that scaling up from the soil to the watershed is possible for Mg release. The rate of Mg release from biotite, normalized to Brunauer-Emmett-Teller (BET) surface area, is calculated using a mass balance equation which includes the density and volume of phyllosilicate grains, porewater chemistry and flux, and soil porosity. The mean rates of biotite weathering calculated from K and Mg release rates are approximately 6 and 11 × 10 −16 mol biotite m biotite −2 s −1 respectively, significantly slower than laboratory rates (10 −12 to 10 −11 mol biotite m biotite −2 s −1 ). The discrepancy in scaling down from the soil to the laboratory is probably explained by (1) differences in weathering mechanism between the two environments, (2) higher solute concentrations in soil porewaters, (3) loss of reactive surface area of biotite in the saprolite due to kaolinite and iron oxide coatings, and/or (4) unaccounted-for heterogeneities in flow path through the soil.

El Yunque, Luquillo Experimental Forest, Luquillo ↗

38 - Electromagnetic fields generated by earthquakes

Independent knowledge of the physical processes that occur with seismic events can be obtained from observations of electric and magnetic fields generated by these complex processes. During the past few decades, we have seen a remarkable increase in the quality and quantity of electromagnetic (EM) data recorded before and during earthquakes and volcanic eruptions. This paper describes the most significant recent data and the implications these data have for different generating mechanisms. We note that, despite several decades of relatively high quality monitoring, clear demonstration of the existence of precursory EM signals has not been achieved, although causal relations between coseismic magnetic field changes and earthquake stress drops are no longer in question. This paper extends discussions of tectonomagnetism and tectonoelectricity, over the various parts of the electromagnetic spectrum from radio frequencies (RF) to submicrohertz frequencies, that are covered in Johnston (1989, 1997), Park et al. (1993), Park (1996) special journal issues ( Johnston and Parrot, 1989 , 1998; Parrot and Johnston, 1993 ), and books ( Hayakawa and Fujinawa, 1994 ).

International Geophysics↗

The IASPEI Seismological Software Library

Since computers became widely available in the early 1960s, seismologists have been using them for data acquisition, processing, and analysis, as well as theoretical computation and modeling. For example, the book by Doornbos (1988) contains a collection of seismological algorithms with the corresponding computer programs available on tape or disk from the World Data Center A for Solid Earth Geophysics. The introduction of personal computers in the early 1980s further revolutionized the use of computers for scientific research. Instead of expensive mainframe computers that required a large staff to operate, inexpensive personal computers allowed creative applications to be implemented by individuals with a shoestring budget.

International Geophysics↗

Introduction to the effects of wildland fire on aquatic ecosystems in the Western USA

The management of wildfire has long been controversial. The role of fire and fire-related management in terrestrial and aquatic ecosystems has become an important focus in recent years, but the general debate is not new. In his recent book, Stephen Pyne (2001 ) describes the political and scientific debate surrounding the creation of the U.S. Forest Service and the emergence of fire suppression as a central tenet of wildland management. Essentially, views in the first decade of the 20th century focused on fire as good or evil: a tool that might benefit other resources or interests (e.g. Indian burning) and mitigate larger more destructive fires, or a threat to the recruitment and productivity of newly designated forest reserves. The “great fires” in the Western USA in 1910 and the associated loss of human life and property largely forged the public and political will to suppress fire on a massive scale.

Forest Ecology and Management↗

An enthusiast's guide to agrostology

Book review of: Population Biology of Grasses edited by G.P. Cheplick Cambridge University Press, 1998. £50.00/$85.00 hbk (xii +399 pages) ISBN 0 521 57205 3

Trends in Plant Science↗

On the reported magnetic precursor of the 1993 guam earthquake

Using 1-second magnetometer data recorded 67 km from the epicenter of the 1993 M w 7.7 Guam earthquake, Hayakawa et al. (1996) and Miyahara et al. (1999) identify anomalous precursory changes in ultra-low frequency magnetic polarization (the ratio of vertical to horizontal field components). In a check of their results, we compare their data (GAM) with 1-second data from the Kakioka observatory (KAK) in Japan and the global magnetic activity index Kp. We also examine log books kept by USGS staff working on the Guam magnetic observatory. We find (1) analysis problems with both Hayakawa et al. and Miyahara et al., (2) significant correlation between the GAM, KAK, and Kp data, and (3) an absence of identifiable localized anomalous signals occurring prior to the earthquake. The changes we do find in polarization are part of normal global magnetic activity; they are unrelated to the earthquake. Copyright 2009 by the American Geophysical Union.

Geophysical Research Letters↗

Conference explores mechanical involvement of fluids in faulting

A growing body of evidence suggests that fluids are intimately linked to a variety of faulting processes. These include the long-term structural and compositional evolution of fault zones; fault creep; and the nucleation, propagation, arrest, and recurrence of earthquake ruptures. Besides the widely recognized physical role of fluid pressures in controlling the strength of crustal fault zones, it is also apparent that fluids can exert mechanical influence through a variety of chemical effects. To address these issues, a “Red-Book” Conference on the Mechanical Effects of Fluids in Faulting was sponsored by the U.S. Geological Survey under the auspices of the National Earthquake Hazards Reduction Program at Fish Camp, Calif., from June 6–10, 1993. The coconvenors were Steve Hickman, Rick Sibson, and Ron Bruhn.

California↗

On the decline of the Rusty Blackbird and the use of ornithological literature to document long-term population trends

Unlike most North American blackbirds, Rusty Blackbirds ( Euphagus carolensis ) have shown steep population declines. Declines of approximately 90% are indicated for three recent decades from the Breeding Bird Survey, Christmas Bird Counts, and Quebec Checklist Program. Analyses of abundance classifications in bird distribution books and annotated checklists reveal an overlooked but long-term decline dating back to at least the early part of this century. Rusty Blackbirds were described as very common to abundant in 56% of the pre-1920 published accounts, 19% of the 1921–1950 accounts, and only 7% of the post-1950 accounts. Rusty Blackbirds were described as uncommon in none of the pre-1950 accounts, 18% of the 1951–1980 accounts, and 43% of the post-1980 accounts. A similar pattern was found for analyses based on local checklists. Destruction of wooded wetlands on wintering grounds, acid precipitation, and the conversion of boreal forest wetlands could have contributed to these declines. Systematic analysis of regional guides and checklists provides a valuable tool for examining large-scale and long-term population changes in birds.

Conservation Biology↗

Advances in the hydrogeochemistry and microbiology of acid mine waters

The last decade has witnessed a plethora of research related to the hydrogeochemistry and microbiology of acid mine waters and associated tailings and waste-rock waters. Numerous books, reviews, technical papers, and proceedings have been published that examine the complex bio-geochemical process of sulfide mineral oxidation, develop and apply geochemical models to site characterization, and characterize the microbial ecology of these environments. This review summarizes many of these recent works, and provides references for those investigating this field. Comparisons of measured versus calculated Eh and measured versus calculated pH for water samples from several field sites demonstrate the reliability of some current geochemical models for aqueous speciation and mass balances. Geochemical models are not, however, used to predict accurately time-dependent processes but to improve our understanding of these systems and to constrain possible processes that contribute to actual or potential water quality issues. Microbiological studies are demonstrating that there is much we have yet to learn about the types of different microorganisms and their function and ecology in mine-waste environments. A broad diversity of green algae, bacteria, archaea, yeasts, and fungi are encountered in acid mine waters, and a better understanding of their ecology and function may potentially enhance remediation possibilities as well as our understanding of the evolution of life.

International Geology Review↗

Diatoms.org: Supporting taxonomists, connecting communities

Consistent identification of diatoms is a prerequisite for studying their ecology, biogeography, and successful application as environmental indicators. However, taxonomic consistency among observers has been difficult to achieve because taxonomic information is scattered across numerous literature sources, presenting challenges to the diatomist. Firstly, literature is often inaccessible because of cost or its location in journals that are not widely circulated. Secondly, taxonomic revisions of diatoms are taking place faster than floras can be updated. Finally, taxonomic information is often contradictory across literature sources. These issues can be addressed by developing a content creation community dedicated to making taxonomic, ecological, and image-based data freely available for diatom researchers. Diatoms.org represents such a content curation community, providing open, online access to a vast amount of recent and historical information on North American diatom taxonomy and ecology. The content curation community aggregates existing taxonomic information, creates new content, and provides feedback in the form of corrections and notices of literature with nomenclatural changes. The website not only addresses the needs of experienced diatom scientists for consistent identification but is also designed to meet users at their level of expertise, including engaging the lay public in the importance of diatom science. The website now contains over 1000 species pages contributed by over 100 content contributors, from students to established scientists. The project began with the intent to provide accurate information on diatom identification, ecology, and distribution using an approach that incorporates engaging design, user feedback, and advanced data access technology. In retrospect, the project that began as an ‘extended electronic book’ has emerged not only as a means to support taxonomists, but for practitioners to communicate and collaborate, expanding the size of and benefits to the content curation community. In this paper, we outline the development of diatoms.org , document key elements of the project, examine ongoing challenges and consider the unexpected emergent properties, including the value of diatoms.org as a source of data. Ultimately, if the field of diatom taxonomy, ecology, and biodiversity is to be relevant, a new generation of taxonomists needs to be trained and employed using new tools. We propose that diatoms.org is in a key position to serve as a hub of training and continuity for the study of diatom biodiversity and aquatic conditions.

Diatom Research↗

From understanding to action: Integrating new and old methodologies to manage marine infectious disease

Marine diseases can have far-reaching effects on population, community and ecosystem health; however, our ability to track, predict and manage these diseases has, historically, been poor. As a result, the fields of disease ecology and epidemiology have developed at a slower pace for marine than terrestrial systems [ 1 ]. New methodologies, including genomic tools for diagnostics [ 2 , 3 ], transcriptomic tools for measuring host and pathogen responses to infection (e.g. [ 4 , 5 ]), regional oceanic modelling systems that estimate environmental conditions influencing pathogen dispersal and disease progression [ 6 ], artificial intelligence methods for quantifying pathology from images (e.g. [ 7 ]) and advanced disease modelling techniques [ 8 , 9 ] are precipitating a rapid increase in our understanding of marine pathosystems. In 2016, these efforts led to the first special issue of Philosophical Transactions of the Royal Society B ( Marine diseases, volume 371, issue 1689) focused entirely on marine disease ecology and evolution, and in 2020, the first book, Marine disease ecology, was devoted to this topic [ 10 ]. This special issue, focused on marine disease management , is being published a decade after the first Philosophical Transactions special issue on marine diseases. The shift to a management focus reflects an urgent need for management strategies to address high-impact diseases and the rapid methodological advances that have resulted. The papers included in this issue demonstrate the value of combining classical approaches (e.g. routine disease surveillance, reductionistic pathogen challenge trials, rapid throughput diagnostics) with cutting-edge technologies (e.g. high-resolution oceanographic models, Bayesian models, replicated transcriptomic studies) to identify drivers of disease, quantify impacts and suggest management strategies.

Philosophical Transactions of the Royal Society, S↗

Luna B. Leopold--pioneer setting the stage for modern hydrology

In 1986, during the first year of graduate school, the lead author was sampling the water from a pitcher pump in front of “The Shack,” the setting of the opening essays in Aldo Leopold's renowned book A Sand County Almanac. The sampling was part of my Master's work that included quarterly monitoring of water quality on the Leopold Memorial Reserve (LMR) near Baraboo, Wisconsin. The Shack was already a well-known landmark, and it was common to come upon visitors and hikers there. As such, I took no special note of the man who approached me as I was filling sample bottles and asked, as was typical, “What are you doing?”

Ground Water↗

An assessment of current wolf Canis lupus domestication hypotheses based on wolf ecology and behaviour

The dog was the first domesticated animal. Its derivation from grey wolves Canis lupus is important to the study of mammalian domestication, and wolf domestication is an active area of investigation. Recent popular books have promoted a hypothesis that wolves domesticated themselves as opposed to the earliest hypothesis that featured pup collection, adoption, and artificial selection. Continuing research has produced a greater understanding of wolf ecology and behaviour, including new insights into the wolf’s interaction with humans. Several characteristics make the wolf conducive to domestication: its sociality, catholic diet, excellent individual and cultural memory, inbreeding tolerance, varied personalities, and adaptable lifestyle. The wolf’s fear of humans is the main impediment and that alone is a factor strongly disfavouring the self-selection hypothesis. However, collecting young pups from dens and raising them would foster their socialising with humans as pack members. Neither hypothesis explains how wolves undergoing domestication were separated reproductively from their wild relatives, an important condition for domestication. We combine information from the literature with information from our own research on wild wolves, archaeology, and canid morphology. We explain how pup collection and deliberate or incidental selection and encouragement to breed with similarly raised wolves could keep incipient dogs separated reproductively from wild relatives. The key is humans regularly feeding the wolves and keeping only those able to live harmoniously with humans. Well-fed, human-dependent wolves would remain near their food supply and in the company of humans, thus increasing their bonds to humans and vice versa . Outbreeding with wild wolves would thus be avoided. Generation after generation of these human-fed, raised, and selected wolves would become increasingly dependent on humans and shaped by them. The pup-adoption hypothesis presented here is more in keeping with basic wolf ecology and behaviour than the self-domestication hypothesis.

Current Biology↗