USGS Science⌕ Search

SEARCH · USGS Science

Results for “The R Journal”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 847 records · Page 47Linked to original sources
USGS1985

Limnocythere bradburyi n.sp.: a modern ostracode from central Mexico and a possible Quaternary paleoclimatic indicator

Limnocythere bradburyi is a new species of nonmarine ostracode that is living in several lakes in the central Mexican Plateau. These lakes are shallow, turbid, and pan-shaped, having relatively unstable and fluid substrates. Water levels of these lakes are high in the summer and low or dry in the winter. These lakes usually contain fresh to slightly saline water during the rainy season (summer-fall) and slightly saline water during the dry season (winter-spring), and have solute composition that is dominated by Na+, HCO3--CO32-, Cl- ions. The regional climate is characterized as humid temperate with mild equitable temperatures throughout the year. Winter temperatures are usually above 0oC, whereas summer temperatures are commonly below 30oC. The water temperature of the lakes containing L. bradburyi generally reflects atmospheric temperatures. The ostracode's life cycle coincides with the climatic wet cycle and is therefore completed during the warmest period of the year, which is in marked contrast to ostracodes living in lakes in the US and Canada that usually begin their life cycle with the spring rain and snow melt in cold water and complete their life cycle in warm water. This contrasting climatic life-cycle pattern between central Mexico and the US may be sufficient to explain why L. bradburyi occurs commonly in many Quaternary deposits in the southwestern US, but has not been found living in the US.

Journal of Paleontology↗
USGS1984

Thermal conductivity determinations on solid rock - a comparison between a steady-state divided-bar apparatus and a commercial transient line-source device

Two apparatuses were used to measure thermal conductivities on pairs of contiguous samples from 17 specimens of solid rock: the USGS divided-bar apparatus, a steadystate comparative method, and the Shotherm "Quick Thermal Meter" (QTM), which employs a transient strip heat source. Both devices were calibrated relative to fused silica. Both devices have a reproducibility of ??5% or better depending, to some extent, on the physical nature of the specimen being tested. For solid rocks, specimen preparation for the divided bar is much more tedious and expensive than for the QTM, which seems insensitive to minor surface roughness. The QTM does, however, require quite large specimens (30 mm ?? 60 mm ?? 100 mm as a minimum for rocks) with even larger specimens (50 mm ?? 100 mm ?? 100 mm) required for higher conductivity material (3.5 W m-1 K-1 and greater). Experimental times are comparable; however, the QTM is a self-contained unit that can be transported easily and set up quickly and requires no more space than a standard desk top. From a formal statistical comparison, it appears that, over a large range of conductivities (1.4 to ???5 W m-1 K-1) and rock types, the two instruments will yield the same value of thermal conductivity for isotropic rocks. ?? 1984.

Journal of Volcanology and Geothermal Research↗
USGS1991

A Sr-isotopic comparison between thermal waters, rocks, and hydrothermal calcites, Long Valley caldera, California

The 87Sr/86Sr values of thermal waters and hydrothermal calcites of the Long Valley caldera geothermal system are more radiogenic than those of young intracaldera volcanic rocks. Five thermal waters display 87Sr/86Sr of 0.7081-0.7078 but show systematically lighter values from west to east in the direction of lateral flow. We believe the decrease in ratio from west to east signifies increased interaction of deeply circulating thermal water with relatively fresh volcanic rocks filling the caldera depression. All types of pre-, syn-, and post-caldera volcanic rocks in the west and central caldera have (87Sr/86Sr)m between about 0.7060 and 0.7072 and values for Sierra Nevada granodiorites adjacent to the caldera are similar. Sierran pre-intrusive metavolcanic and metasedimentary rocks can have considerably higher Sr-isotope ratios (0.7061-0.7246 and 0.7090-0.7250, respectively). Hydrothermally altered volcanic rocks inside the caldera have (87Sr/86Sr)m slightly heavier than their fresh volcanic equivalents and hydrothermal calcites (0.7068-0.7105) occupy a midrange of values between the volcanic/plutonic rocks and the Sierran metamorphic rocks. These data indicate that the Long Valley geothermal reservoir is first equilibrated in a basement complex that contains at least some metasedimentary rocks. Reequilibration of Sr-isotope ratios to lower values occurs in thermal waters as convecting geothermal fluids flow through the isotopically lighter volcanic rocks of the caldera fill. ?? 1991.

Journal of Volcanology and Geothermal Research↗
USGS1994

Proximal pyroclastic deposits from the 1989-1990 eruption of Redoubt Volcano, Alaska - stratigraphy, distribution, and physical characteristics

More than 20 eruptive events during the 1989-1990 eruption of Redoubt Volcano emplaced a complex sequence of lithic pyroclastic-flow, -surge, -fall, ice-diamict, and lahar deposits mainly on the north side of the volcano. The deposits record the changing eruption dynamics from initial gas-rich vent-clearing explosions to episodic gas-poor lava-dome extrusions and failures. The repeated dome failures produced lithic pyroclastic flows that mixed with snow and glacial ice to generate lahars that were channelled off Drift glacier into the Drift River valley. Some of the dome failures occurred without precursory seismic warning and appeared to result solely from gravitational instability. Material from the disrupted lava domes avalanched down a steep, partly ice-filled canyon incised on the north flank of the volcano and came to rest on the heavily crevassed surface of the piedmont lobe of Drift glacier. Most dome-collapse events resulted in single, monolithologic, massive to reversely graded, medium- to coarse-grained, sandy pyroclastic-flow deposits containing abundant dense dome clasts. These deposits vary in thickness, grain size, and texture depending on distance from the vent and local topography; deposits are finer and better sorted down flow, thinner and finer on hummocks, and thicker and coarser where ponded in channels cut through the glacial ice. The initial vent-clearing explosions emplaced unusual deposits of glacial ice, snow, and rock in a frozen matrix on the north and south flanks of the volcano. Similar deposits were described at Nevado del Ruiz, Columbia and have probably been emplaced at other snow-and-ice-clad volcanoes, but poor preservation makes them difficult to recognize in the geologic record. In a like fashion, most deposits from the 1989-1990 eruption of Redoubt Volcano may be difficult to recognize and interpret in the future because they were emplaced in an environment where glacio-fluvial processes dominate and quickly obscure the primary depositional record. ?? 1994.

Journal of Volcanology and Geothermal Research↗
USGS1994

Character, mass, distribution, and origin of tephra-fall deposits of the 1989-1990 eruption of redoubt volcano, south-central Alaska

The 1989-1990 eruption of Redoubt Volcano spawned about 20 areally significant tephra-fall deposits between December 14, 1989 and April 26, 1990. Tephra plumes rose to altitudes of 7 to more than 10 km and were carried mainly northward and eastward by prevailing winds, where they substantially impacted air travel, commerce, and other activities. In comparison to notable eruptions of the recent past, the Redoubt events produced a modest amount of tephra-fall deposits - 6 ?? 107 to 5 ?? 1010 kg for individual events and a total volume (dense-rock equivalent) of about 3-5 ?? 107 m3 of andesite and dacite. Two contrasting tephra types were generated by these events. Pumiceous tephra-fall deposits of December 14 and 15 were followed on December 16 and all later events by fine-grained lithic-crystal tephra deposits, much of which fell as particle aggregates. The change in the character of the tephra-fall deposits reflects their fundamentally different modes of origin. The pumiceous deposits were produced by magmatically driven explosions. The finegrained lithic-crystal deposits were generated by two processes. Hydrovolcanic vent explosions generated tephrafall deposits of December 16 and 19. Such explosions continued as a tephra source, but apparently with diminishing importance, during events of January and February. Ash clouds of lithic pyroclastic flows generated by collapse of actively growing lava domes probably contributed to tephra-fall deposits of all events from January 2 to April 26, and were the sole source of tephra fall for at least the last 4 deposits. ?? 1994.

Journal of Volcanology and Geothermal Research↗
USGS1999

The influence of seagrass on shell layers and Florida Bay mudbanks

Aerial photography indicates that sometime since the early 1970's, an emergent ridge of shell debris developed on a mudbank north of Calusa Key in Florida Bay. Coarse shell deposits on and within the Bay's shallow mudbanks are believed to be the product of transport during major storm events and subsequent winnowing. However, shell material from the ridge contains nuclear bomb 14C, supporting formation within the past 30 years and the last major hurricanes to influence Florida Bay were Donna and Betsy (1960 and 1965). Results from this study suggest that the Calusa ridge and other coarse shell deposits in Florida Bay can result from, 1) periodic seagrass mortality and wave-induced transport during frequent winter cold fronts and/or 2) mollusc blooms and subsequent burial. A survey of bottom types indicates that dense to intermediate beds of seagrass, mainly Thalassia testudinum (turtle grass), occur within the shallow basins of western Florida Bay and along the margins of Bay mudbanks. Wave measurements and modeling indicate that Thalassia along mudbank margins can reduce incoming wave-energy by over 80%. Seagrass beds also host particularly dense populations of molluscs from periodic 'blooms' and are believed to be the major source of coarse sediments in the Bay. Thus, if bank-edge seagrass dies, sediments, including shell debris, become exposed and subject to greatly increased wave energy. Modeling indicates that winds typical of winter cold fronts in South Florida can produce near-bottom velocities and shear stress at a grass-free bank edge which are sufficient to transport coarse carbonate grains. Shell layers found at depth in mudbank cores can also be explained by previous episodes of sediment accretion over mollusc-rich seagrass beds or grass bed mortality at the edge of a mudbank and shell transport during cold front passage. The latter implies that mortality of marginal seagrass beds has occurred throughout the history of Florida Bay and that the historical influence of hurricanes on sedimentation in the Bay may have been overestimated.

Journal of Coastal Research↗
USGS2001

U.S. Geological Survey programs and investigations related to soil and water conservation

The U.S. Geological Survey has a rich tradition of collecting hydrologic data, especially for fluxes of water and suspended sediment, that provide a foundation for studies of soil and water conservation. Applied and basic research has included investigations of the effects of land use on rangelands, croplands, and forests; hazards mapping; derivation of flood and drought frequency, and other statistics related to streamflow and reservoir storage; development and application of models of rainfall-runoff relations, chemical quality, and sediment movement; and studies of the interactive processes of overland and channel flow with vegetation. Networks of streamgaging stations and (or) sampling sites within numerous drainage basins are yielding information that extends databases and enhances the ability to use those data for interpretive studies.

International Journal of Sediment Research↗
USGS2003

A macroscopic approach to glacier dynamics

A simple approach to glacier dynamics is explored in which there is postulated to be a relationship between area and volume with three parameters: the time for area to respond to changes in volume, a thickness scale, and an area characterizing the condition of the initial state. This approach gives a good fit to the measurements of cumulative balance and area on South Cascade Glacier from 1970-97; the area time-scale is roughly 8 years, the thickness scale about 123 m, and the 1970 area roughly 4% larger than required for adjustment with volume. Combining this relationship with a version of mass continuity expressed in terms of area and volume produces a theory of glacier area and volume response to climate in which another time constant, the volume time-scale, appears. Area and volume both respond like a damped spring and mass system. The damping of the South Cascade response is approximately critical, and the volume time-scale is roughly 48 years, six times the area time-scale. The critically damped spring and mass analogy reproduces the time dependence predicted by the more complicated traditional theory of Nye.

Journal of Glaciology↗
USGS2005

Variation in mangrove forest structure and sediment characteristics in Bocas del Toro, Panama

Mangrove forest structure and sediment characteristics were examined in the extensive mangroves of Bocas del Toro, Republic of Panama. Forest structure was characterized to determine if spatial vegetation patterns were repeated over the Bocas del Toro landscape. Using a series of permanent plots and transects we found that the forests of Bocas del Toro were dominated by Rhizophora mangle with very few individuals of Avicennia germinans and Laguncularia racemosa. Despite this low species diversity, there was large variation in forest structure and in edaphic conditions (salinity, concentration of available phosphorus, Eh and sulphide concentration). Aboveground biomass varied 20-fold, from 6.8 Mg ha-1 in dwarf forests to 194.3 Mg ha-1 in the forests fringing the land. But variation in forest structure was predictable across the intertidal zone. There was a strong tree height gradient from seaward fringe (mean tree height 3.9 m), decreasing in stature in the interior dwarf forests (mean tree height 0.7 m), and increasing in stature in forests adjacent to the terrestrial forest (mean tree height 4.1 m). The predictable variation in forest structure emerges due to the complex interactions among edaphic and plant factors. Identifying predictable patterns in forest structure will aid in scaling up the ecosystem services provided by mangrove forests in coastal landscapes.

Caya Solarte, Isla Colon, Isla Popa, Isla San Cris↗
USGS2006

Non-invasive method to obtain DNA from freshwater mussels (Bivalvia: Unionidae)

To determine whether DNA could be isolated from tissues obtained by brush-swabbing the mantle, viscera and foot, mantle-clips and swabbed cells were obtained from eight Quadrula pustulosa (Lea, 1831). DNA yields from clips and swabbings were 447.0 and 975.3 ??g/??L, respectively. Furthermore, comparisons of sequences from the ND-1 mitochondrial gene region showed a 100% sequence agreement of DNA from cells obtained by clips and swabs. To determine the number of swabs needed to obtain adequate yields of DNA for analyses, the visceras and feet of 5 Q. pustulosa each were successively swabbed 2, 4 and 6 times. DNA yields from the 2, 4 and 6 swabbed mussel groups were 399.4, 833.8 and 852.6 ng/??L, respectively. ND-1 sequences from the lowest yield still provided 846-901 bp for the ND-1 region. Nevertheless, to ensure adequate DNA yield from cell samples obtained by swabbing, we recommend that 4 swab-strokes of the viscera and foot be obtained. The use of integumental swabbing for collection of cells for determination of genetic relationships among freshwater mussels is noninvasive, when compared with tissue collection by mantle-clipping. Therefore, its use is recommended for freshwater mussels, especially state-protected or federally listed mussel species.

Journal of Shellfish Research↗
USGS2006

Sampling blood from big brown bats (Eptesicus fuscus) in the field with and without anesthesia: Impacts on survival

Blood was collected from wild big brown bats (Eptesicus fuscus) with and without anesthesia in Fort Collins, Colorado in 2004 to assess the impacts of these procedures on short-term survival and 1-yr return rates. Short-term survival and 1-yr return rates after release were passively monitored using PIT tag detection hoops placed at selected buildings. Comparison of 14-day maximum likelihood survival estimates from bats not bled (142 adult females, 62 volant juveniles), and bats sampled for blood with anesthesia (96 adult females, 23 volant juveniles) and without anesthesia (112 adult females, 22 volant juveniles) indicated no adverse effects of either treatment (juveniles: X2=53.38, df=41, P=0.09; adults: X2=39.09, df=44, P=0.68). Return rates of bats one year after sampling were similar among adult female controls (75.4%, n=142, 95% CI=67.4-82.2%), females sampled for blood with anesthesia (83.0%, n=112, 95% CI=74.8-89.5%), and females sampled without anesthesia (87.5%, n=96, 95% CI=79.2-93.4%). Lack of an effect was also noted in 1-yr return rates of juvenile females. These data suggest that the use of anesthesia during sampling of blood has no advantages in terms of enhancement of survival in big brown bats. ?? Wildlife Disease Association 2006.

Journal of Wildlife Diseases↗
USGS2012

Spawning salmon and the fitness of stream-dwelling fishes: Marine-derived nutrients show saturating effects on growth and energy storage in juvenile salmonids

We examined how marine-derived nutrients (MDN), in the form of spawning Pacific salmon, influenced the nutritional status and d15N of stream-dwelling fishes. We sampled juvenile coho salmon (Oncorhynchus kisutch) and Dolly Varden (Salvelinus malma) during spring and fall from 11 south-central Alaskan streams that ranged widely in spawning salmon biomass (0.1–4.7 kg•m–2). Growth rate (as indexed by RNA–DNA ratios), energy density, and d15N enrichment in spring-sampled fishes increased with spawner biomass, indicating the persistence of spawner effects more than 6 months after salmon spawning. Point estimates suggest that spawner effects on nutrition were substantially greater for coho salmon than Dolly Varden (268% and 175% greater for growth and energy, respectively), indicating that both species benefitted physiologically, but that juvenile coho salmon accrued more benefits than Dolly Varden. Although the data were less conclusive for fall- than spring-sampled fish, they do suggest spawner effects were also generally positive during fall, soon after salmon spawned. In a follow-up analysis where growth rate and energy density were modeled as a function of d15N enrichment, results suggested that both increased with MDN assimilation, especially in juvenile coho salmon. Our results support the importance of salmon runs to the nutritional ecology of stream-dwelling fishes.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS1990

A sensitivity analysis of nine diversity and seven similarity indices

Indices summarizing community structure are used to evaluate fundamental community ecology, species interaction, biogeographical factors, and environmental stress. Some of these indices are insensitive to gross community changes induced by contaminants of pollution. Sixteen indices commonly used to assess the status of aquatic communities in water quality studies were evaluated using computer simulation techniques to determine specific index responses. Three communities of different initial structure (19 species, 38 species, and 83 species) were generated using the lognormal equation. Each community was then perturbed in three ways: common species disproportionally reduced, all species proportionally reduced, and rare species disproportionally reduced. The behavior of the indices was analyzed graphically and differential response due to initial community structure and type of community change was documented. Some recommendations of potential sources of error using community levels indices were developed.

Research Journal of the Water Pollution Control Fe↗
USGS1990

Food habits of Yellowstone grizzly bears, 1977-1987

Food habits of grizzly bears were studied for 11 years in the Yellowstone area of Wyoming, Montana, and Idaho by analyzing scats. Ungulate remains constituted a major portion of early-season scats, graminoids of May and June scats, and whitebark pine seeds of late-season scats. Berries composed a minor portion of scats during all months. The diet varied most among years during May, September, and October, and was most diverse during August. Defecation rates peaked in July and were low in April through June. Among-years differences in scat content were substantial; estimates of average scat composition took 4-6 years to stabilize. Major trends in diet were evident and reflected long-term variation. We suggest that long-term studies are necessary to adequately document bears' food habits in variable environments; the Yellowstone grizzly bears' diet varied with seasonal and yearly availability of high-quality foods, lack of berries and large fluctuations in the size of pine seed crops were major factors limiting bear density in the Yellowstone area, and the availability of edible human refuse buffered the limitations imposed by inadequate berry and pine seed crops prior to the 1970s.

Idaho, Montana, Wyoming↗
USGS2014

A new look at the Lake Superior biomass size spectrum

We synthesized data from multiple sampling programs and years to describe the Lake Superior pelagic biomass size structure. Data consisted of Coulter counts for phytoplankton, optical plankton counts for zooplankton, and acoustic surveys for pelagic prey fish. The size spectrum was stable across two time periods separated by 5 years. The primary scaling or overall slope of the normalized biomass size spectra for the combined years was −1.113, consistent with a previous estimate for Lake Superior (−1.10). Periodic dome structures within the overall biomass size structure were fit to polynomial regressions based on the observed sub-domes within the classical taxonomic positions (algae, zooplankton, and fish). This interpretation of periodic dome delineation was aligned more closely with predator–prey size relationships that exist within the zooplankton (herbivorous, predacious) and fish (planktivorous, piscivorous) taxonomic positions. Domes were spaced approximately every 3.78 log10 units along the axis and with a decreasing peak magnitude of −4.1 log 10 units. The relative position of the algal and herbivorous zooplankton domes predicted well the subsequent biomass domes for larger predatory zooplankton and planktivorous prey fish.

Lake Superior↗
USGS1978

Helium in soil gases of the Roosevelt Hot Springs Known Geothermal Resource Ares, Beaver County, Utah

Soil samples were collected in two parallel traverses across the Dome fault zone of the Roosevelt Hot Springs Known Geothermal Resource Area. The samples were sealed in air-tight aluminum cans, and the soil gas was allowed to equilibrate with the atmospheric air in the cans. Gas from the cans was analyzed by mass spectrometry. Samples collected over faults contained anomalously high concentrations of helium. Samples collected close to a geothermal well 884 m deep contained more helium than samples collected near another geothermal well 1370 m deep.

Utah↗
USGS1977

Chemical dissolution of sulfide minerals

Chemical dissolution treatments involving the use of aqua regia, 4 N HNO 3 , H 2 O 2 -ascorbic acid, oxalic acid, KClO 3 +HCl, and KClO 3 +HCl followed by 4 N HNO 3 were applied to specimens of nine common sulfide minerals (galena, chalcopyrite, cinnabar, molybdenite, orpiment, pyrite, stibnite, sphalerite, and tetrahedrite) mixed individually with a clay loam soil. The resultant decrease in the total sulfur content of the mixture, as determined by using the Leco induction furnace, was used to evaluate the effectiveness of each chemical treatment. A combination of KClO 3 +HCl followed by 4 N HNO 3 boiling gently for 20 min has been shown to be very effective in dissolving all the sulfide minerals. This treatment is recommended to dissolve metals residing in sulfide minerals admixed with secondary weathering products, as one step in a fractionation scheme whereby metals in soluble and adsorbed forms, and those associated with organic materials and secondary oxides, are first removed by other chemical extractants.

Journal of Research of the U.S. Geological Survey↗