USGS Science⌕ Search

SEARCH · USGS Science

Results for “One Health”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 847 records · Page 47Linked to original sources

African dust carries microbes across the ocean: are they affecting human and ecosystem health?

Atmospheric transport of dust from northwest Africa to the western Atlantic Ocean region may be responsible for a number of environmental hazards, including the demise of Caribbean corals; red tides; amphibian diseases; increased occurrence of asthma in humans; and oxygen depletion (eutrophication) in estuaries. Studies of satellite images suggest that hundreds of millions of tons of dust are trans-ported annually at relatively low altitudes across the Atlantic Ocean to the Caribbean Sea and southeastern United States. The dust emanates from the expanding Sahara/Sahel desert region in Africa and carries a wide variety of bacteria and fungi. The U.S. Geological Survey, in collaboration with the NASA/Goddard Spaceflight Center, is conducting a study to identify microbes--bacteria, fungi, viruses--transported across the Atlantic in African soil dust. Each year, millions of tons of desert dust blow off the west African coast and ride the trade winds across the ocean, affecting the entire Caribbean basin, as well as the southeastern United States. Of the dust reaching the U.S., Florida receives about 50 percent, while the rest may range as far north as Maine or as far west as Colorado. The dust storms can be tracked by satellite and take about one week to cross the Atlantic.

Open-File Report↗

Optimization of salt marsh management at the Eastern Shore of Virginia and Fisherman Island National Wildlife Refuges, Virginia, through use of structured decision making

Structured decision making is a systematic, transparent process for improving the quality of complex decisions by identifying measurable management objectives and feasible management actions; predicting the potential consequences of management actions relative to the stated objectives; and selecting a course of action that maximizes the total benefit achieved and balances tradeoffs among objectives. The U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, applied an existing, regional framework for structured decision making to develop a prototype tool for optimizing tidal marsh management decisions at the Eastern Shore of Virginia and Fisherman Island National Wildlife Refuges in Virginia. Refuge biologists, refuge managers, and research scientists identified multiple potential management actions to improve the ecological integrity of six marsh management units within the refuges, totaling about 575 hectares, and estimated the outcomes of each action in terms of performance metrics associated with each management objective. Value functions previously developed at the regional level were used to transform metric scores to a common utility scale, and utilities were summed to produce a single score representing the total management benefit that could be accrued from each potential management action. Constrained optimization was used to identify the set of management actions, one per marsh management unit, that could maximize total management benefits at different cost constraints at the refuge scale. Results indicated that, for the objectives and actions considered here, total management benefits may increase consistently up to approximately $ 143,000, but that further expenditures may yield diminishing return on investment. Potential management actions in optimal portfolios at total costs less than $ 143,000 included digging runnels by hand to improve drainage from the marsh surface, breaching a road to restore natural hydrology, trapping predators to enhance nest success of tidal marsh birds, and reducing the abundance of Odocoileus virginianus (white-tailed deer) to minimize their effects on marsh vegetation. The potential management benefits were derived from expected increases in number of tidal marsh obligate breeding birds, species richness of nekton, and density of spiders (as an indicator of trophic health); and an expected decrease in duration of surface flooding. The prototype presented here does not resolve management decisions; rather, it provides a framework for decision making at the Eastern Shore of Virginia and Fisherman Island National Wildlife Refuges that can be updated as new data and information become available. Insights from this process may also be useful to inform future habitat management planning at the refuges.

Virginia↗

Statewide sampling to determine spatial distribution, prevalence, and occurrence of per- and polyfluoroalkyl substances (PFAS) in Illinois community water supplies, 2020–21

Per- and polyfluoroalkyl substances (PFAS) are a group of synthetic chemicals that have been manufactured and used globally since the 1940s. PFAS are used for their oil- and water-repellent properties, ability to reduce friction, and their flame-retardant nature. PFAS are widely used in a variety of products, including clothing, carpet, food packaging, and firefighting foam. The properties that make them useful in manufacturing, however, also make them persistent and mobile, causing potential exposures to the environment and humans. Known as “forever chemicals,” these compounds resist degradation and have been determined to bioaccumulate in humans and wildlife. The Illinois Environmental Protection Agency (IEPA) collected a total of 1,711 samples (includes quality-control samples) of finished water at 1,428 entry points from 1,017 Illinois community water supply (CWS) systems and analyzed the water samples for PFAS. The results following confirmation samples indicated a mean of 99 percent of all sample results were below the minimum reporting level (MRL) of 2 nanograms per liter (ng/L). Of the detections at or above the MRL, 7 of 18 PFAS were detected in 149 of 1,428 entry points (about 10 percent). Of the nearly 7.4 million residents directly served by the CWS systems sampled, more than 1.3 million residents (about 18 percent) are served by CWS systems that had at least one detection of PFAS above the MRL of 2 ng/L. The most frequently detected PFAS were perfluorobutanesulfonic acid (about 6.2 percent, 37 ng/L maximum concentration), perfluorooctanesulfonic acid (PFOS) (about 5.0 percent, 150 ng/L maximum concentration), and perfluorooctanoic acid (PFOA) (about 4.8 percent, 25 ng/L maximum concentration). Of the 1,428 entry point samples from the CWS systems, 149 samples had confirmed detections of PFAS, with 93 of those 149 (about 62 percent) samples having at least one PFAS with a concentration that exceeded the median detected concentration of 3.2 ng/L. The highest concentrations detected were 150 ng/L (PFOS) and 140 ng/L (perfluorohexanesulfonic acid) at one CWS location which has been shut down and a different source of water has been provided to the consumers. Although PFAS detections were more common in CWS systems using surface-water sources (about 35 percent, 30 of 85) and mixed sources (50 percent, 5 of 10) compared to those using groundwater sources (about 9 percent, 114 of 1,333), a greater range of PFAS concentrations were observed in groundwater CWS systems (2 to 150 ng/L) than in surface-water CWS systems (2 to 15 ng/L). Statistically significant differences were determined between some detected PFAS (PFOA, PFOS, and perfluorohexanoic acid) and the source of drinking water (groundwater, surface water, or mixed). This report summarizes the occurrence and spatial distribution of PFAS in CWS systems across Illinois. The results from this sampling effort could be used by Illinois public health officials to identify the potential risk of PFAS in drinking water to human health.

Illinois↗

Non-native Rhizophora mangle as sinks for coastal contamination on Moloka'i, Hawai'i

Coastal mangrove forests provide a suite of environmental services, including sequestration of anthropogenic contamination. Yet, research lags on the environmental fate and potential human health risks of mangrove-sequestered contaminants in the context of mangrove removal for development and range shifts due to climate change. To address this, we conducted a study on Moloka'i, Hawai'i, comparing microplastic and pesticide contamination in coastal compartments both at areas modified by non-native red mangroves ( Rhizophora mangle ) and unmodified, open coastline. Sediment, porewater, and mangrove plant tissues were collected to quantify microplastic and pesticide concentrations across ecosystem type. Average microplastics were similar between mangrove (8.89 items/kg) and non-mangrove areas (9.01 items/kg) in sediment and porewater, but mangrove roots were a substantial reservoir of microplastics (2004 items/kg). Additionally, there was a strong relationship between proximity to urban development and microplastics detected. Six pesticides were detected, most commonly the insecticide bifenthrin, found in most sediment samples (11.3 ng/g), all root samples (243.3 ng/g), and one propagule sample (8.60 ng/g). Other pesticides detected with appreciable concentrations include the neonicotinoid insecticide imidacloprid and the legacy insecticide transformation product, p,p’-DDE. The other detections, all at concentrations < 1 ng/g, were p,p’-DDT, trifluralin, and permethrin. The high concentrations of bifenthrin in roots compared to lower concentrations detected in sediment suggest that mangrove roots strongly accumulate some pesticides, indicating mangrove roots as a sink for organic contaminants. Study methods could be applied to other Hawaiian Islands and other locations where mangroves have been introduced to further examine the observed trends. Additional information is needed to investigate the fate and cycling of pesticides and microplastics adhered to mangrove roots, to better inform non-native mangrove removal efforts on Moloka'i and elsewhere.

Hawaii↗

Water Quality in the Yakima River Basin, Washington, 1999-2000

This report contains the major findings of a 1999?2000 assessment of water quality in streams and drains in the Yakima River Basin. It is one of a series of reports by the NAWQA Program that present major findings on water resources in 51 major river basins and aquifer systems across the Nation. In these reports, water quality is assessed at many scales?from large rivers that drain lands having many uses to small agricultural watersheds?and is discussed in terms of local, State, and regional issues. Conditions in the Yakima River Basin are compared to those found elsewhere and to selected national benchmarks, such as those for drinking-water quality and the protection of aquatic organisms. This report is intended for individuals working with water-resource issues in Federal, Tribal, State, or local agencies; universities; public interest groups; or the private sector. The information will be useful in addressing a number of current issues, such as source-water protection, pesticide registration, human health, drinking water, hypoxia and excessive growth of algae and plants, the effects of agricultural land use on water quality, and monitoring and sampling strategies. This report is also for individuals who wish to know more about the quality of water resources in areas near where they live, and how that water quality compares to the quality of water in other areas across the Nation. Other products describing water-quality conditions in the Yakima River Basin are available. Detailed technical information, data and analyses, methodology, and maps that support the findings presented in this report can be accessed from http://or.water.usgs.gov/yakima. Other reports in this series and data collected from other basins can be accessed from the national NAWQA Web site (http://water.usgs.gov/nawqa).

Circular↗

Organic Compounds in Clackamas River Water Used for Public Supply near Portland, Oregon, 2003-05

Organic compounds studied in this U.S. Geological Survey (USGS) assessment generally are man-made, including pesticides, gasoline hydrocarbons, solvents, personal care and domestic-use products, disinfection by-products, and manufacturing additives. In all, 56 compounds were detected in samples collected approximately monthly during 2003-05 at the intake for the Clackamas River Water plant, one of four community water systems on the lower Clackamas River. The diversity of compounds detected suggests a variety of different sources and uses (including wastewater discharges, industrial, agricultural, domestic, and others) and different pathways to drinking-water supplies (point sources, precipitation, overland runoff, ground-water discharge, and formation during water treatment). A total of 20 organic compounds were commonly detected (in at least 20 percent of the samples) in source water and (or) finished water. Fifteen compounds were commonly detected in source water, and five of these compounds (benzene, m- and p-xylene, diuron, simazine, and chloroform) also were commonly detected in finished water. With the exception of gasoline hydrocarbons, disinfection by-products, chloromethane, and the herbicide diuron, concentrations in source and finished water were less than 0.1 microgram per liter and always less than human-health benchmarks, which are available for about 60 percent of the compounds detected. On the basis of this screening-level assessment, adverse effects to human health are assumed to be negligible (subject to limitations of available human-health benchmarks).

Fact Sheet↗

Effects of future urban and biofuel crop expansions on the riverine export of phosphorus to the Laurentian Great Lakes

Increased phosphorus (P) loadings threaten the health of the world&rsquo;s largest freshwater resource, the Laurentian Great Lakes (GL). To understand the linkages between land use and P delivery, we coupled two spatially explicit models, the landscape-scale SPARROW P fate and transport watershed model and the Land Transformation Model (LTM) land use change model, to predict future P export from nonpoint and point sources caused by changes in land use. According to LTM predictions over the period 2010&ndash;2040, the GL region of the U.S. may experience a doubling of urbanized areas and agricultural areas may increase by 10%, due to biofuel feedstock cultivation. These land use changes are predicted to increase P loadings from the U.S. side of the GL basin by 3.5&ndash;9.5%, depending on the Lake watershed and development scenario. The exception is Lake Ontario, where loading is predicted to decrease by 1.8% for one scenario, due to population losses in the drainage area. Overall, urban expansion is estimated to increase P loadings by 3.4%. Agricultural expansion associated with predicted biofuel feedstock cultivation is predicted to increase P loadings by an additional 2.4%. Watersheds that export P most efficiently and thus are the most vulnerable to increases in P sources tend to be found along southern Lake Ontario, southeastern Lake Erie, western Lake Michigan, and southwestern Lake Superior where watershed areas are concentrated along the coastline with shorter flow paths. In contrast, watersheds with high soil permeabilities, fractions of land underlain by tile drains, and long distances to the GL are less vulnerable.

Laurentian Great Lakes↗

Arsenic in groundwater: a summary of sources and the biogeochemical and hydrogeologic factors affecting arsenic occurrence and mobility

Arsenic (As) is a metalloid element (atomic number 33) with one naturally occurring isotope of atomic mass 75, and four oxidation states (-3, 0, +3, and +5) (Smedley and Kinniburgh, 2002). In the aqueous environment, the +3 and +5 oxidation states are most prevalent, as the oxyanions arsenite (H 3 AsO 3 or H 2 AsO 3 - at pH ~9-11) and arsenate (H 2 AsO 4 - and HAsO 4 2- at pH ~4-10) (Smedley and Kinniburgh, 2002). In soils, arsine gases (containing As 3- ) may be generated by fungi and other organisms (Woolson, 1977). The different forms of As have different toxicities, with arsine gas being the most toxic form. Of the inorganic oxyanions, arsenite is considered more toxic than arsenate, and the organic (methylated) arsenic forms are considered least toxic (for a detailed discussion of toxicity issues, the reader is referred to Mandal and Suzuki (2002)). Arsenic is a global health concern due to its toxicity and the fact that it occurs at unhealthful levels in water supplies, particularly groundwater, in more than 70 countries (Ravenscroft et al., 2009) on six continents.

Book chapter↗

Development of a multimetric index for assessing the biological condition of the Ohio River

The use of fish communities to assess environmental quality is common for streams, but a standard methodology for large rivers is as yet largely undeveloped. We developed an index to assess the condition of fish assemblages along 1,580 km of the Ohio River. Representative samples of fish assemblages were collected from 709 Ohio River reaches, including 318 "least-impacted" sites, from 1991 to 2001 by means of standardized nighttime boat-electrofishing techniques. We evaluated 55 candidate metrics based on attributes of fish assemblage structure and function to derive a multimetric index of river health. We examined the spatial (by river kilometer) and temporal variability of these metrics and assessed their responsiveness to anthropogenic disturbances, namely, effluents, turbidity, and highly embedded substrates. The resulting Ohio River Fish Index (ORFIn) comprises 13 metrics selected because they responded predictably to measures of human disturbance or reflected desirable features of the Ohio River. We retained two metrics (the number of intolerant species and the number of sucker species [family Catostomidae]) from Karr's original index of biotic integrity. Six metrics were modified from indices developed for the upper Ohio River (the number of native species; number of great-river species; number of centrarchid species; the number of deformities, eroded fins and barbels, lesions, and tumors; percent individuals as simple lithophils; and percent individuals as tolerant species). We also incorporated three trophic metrics (the percent of individuals as detritivores, invertivores, and piscivores), one metric based on catch per unit effort, and one metric based on the percent of individuals as nonindigenous fish species. The ORFIn declined significantly where anthropogenic effects on substrate and water quality were prevalent and was significantly lower in the first 500 m below point source discharges than at least-impacted sites nearby. Although additional research on the temporal stability of the metrics and index will likely enhance the reliability of the ORFIn, its incorporation into Ohio River assessments still represents an improvement over current physicochemical protocols.

Transactions of the American Fisheries Society↗

Optimization of salt marsh management at the Edwin B. Forsythe National Wildlife Refuge, New Jersey, through use of structured decision making

Structured decision making is a systematic, transparent process for improving the quality of complex decisions by identifying measurable management objectives and feasible management actions; predicting the potential consequences of management actions relative to the stated objectives; and selecting a course of action that maximizes the total benefit achieved and balances tradeoffs among objectives. The U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, applied an existing, regional framework for structured decision making to develop a prototype tool for optimizing tidal marsh management decisions at the Edwin B. Forsythe National Wildlife Refuge in New Jersey. Refuge biologists, refuge managers, and research scientists identified multiple potential management actions to improve the ecological integrity of 23 marsh management units within the refuge and estimated the outcomes of each action in terms of performance metrics associated with each management objective. Value functions previously developed at the regional level were used to transform metric scores to a common utility scale, and utilities were summed to produce a single score representing the total management benefit that could be accrued from each potential management action. Constrained optimization was used to identify the set of management actions, one per marsh management unit, that could maximize total management benefits at different cost constraints at the refuge scale. Results indicated that, for the objectives and actions considered here, total management benefits may increase consistently up to about \$980,000, but that further expenditures may yield diminishing return on investment. Potential management actions in optimal portfolios at total costs less than \$980,000 included applying sediment to the marsh surface to increase elevation in five marsh management units, digging runnels on the marsh surface to improve drainage in five marsh management units, and breaching roads and berms to improve tidal flow in five marsh management units. The potential management benefits were derived from expected reduction in the duration of surface flooding, improved capacity for marsh elevation to keep pace with sea-level rise and increases in numbers of spiders (as an indicator of trophic health), tidal marsh obligate birds, and wintering American black ducks. The prototype presented here does not resolve management decisions; rather, it provides a framework for decision making at the Edwin B. Forsythe National Wildlife Refuge that can be updated as new data and information become available. Insights from this process may also be useful to inform future habitat management planning at the refuges.

New Jersey↗

Real-time seismic monitoring of structures: Data handling and case studies

Within the last decade, advances in the acquisition, processing and transmission of data from real-time seismic monitoring systems has contributed to the growth in the number structures instrumented with such systems. An equally important factor for such growth can be attributed to the demands by stakeholders to find rapid answers to important questions related to the functionality (or “state of health”) of structures during and immediately following a seismic event. Hence, rapid and accurate assessment of the damage condition or performance of a building or a lifeline structure is of paramount importance to stakeholders, including owners, leasers, permanent and/or temporary occupants, users of infrastructures, city officials and rescue teams that are concerned with safety of those in the building, and those that may be affected in nearby buildings and infrastructures. In earlier papers, we described how observed data from sensors deployed in structures can be configured to establish seismic health monitoring of structures. In these configurations, drift ratios are the main parametric indicator of damage condition of a building. The process described for buildings can be applied directly for bridges as well. For bridges, the term, “drift ratio” is not generally used; however, relative displacements of critical elements of a bridge can be construed as such. While real-time data from structural arrays indicate that these methods are reliable and provide requisite information for owners and other parties to make informed decisions and to choose among pre-defined actions following significant events, there are several issues related to data ownership, transmission and archiving. This paper examines the real-time seismic monitoring systems deployed mainly in the United States, with particular attention to data issues – handling, dissemination, storage, and archiving. In most cases, due to the numerous channels involved, the deployments in each one of the real-time structures can be considered to be an individual array. Two detailed cases are described that demonstrate the variability in data ownership and dissemination.

Book chapter↗

Heat as a tool for studying the movement of ground water near streams

Stream temperature has long been recognized as an important water quality parameter. Temperature plays a key role in the health of a stream’s aquatic life, both in the water column and in the benthic habitat of streambed sediments. Many fish are sensitive to temperature. For example, anadromous salmon require specific temperature ranges to successfully develop, migrate, and spawn [see Halupka and others, 2000]. Metabolic rates, oxygen requirements and availability, predation patterns, and susceptibility of organisms to contaminants are but a few of the many environmental responses regulated by temperature. Hydrologists traditionally treated streams and ground water as distinct, independent resources to be utilized and managed separately. With increasing demands on water supplies, however, hydrologists realized that streams and ground water are parts of a single, interconnected resource [see Winter and others, 1998]. Attempts to distinguish these resources for analytical or regulatory purposes are fraught with difficulty because each domain can supply (or drain) the other, with attendant possibilities for contamination exchange. Sustained depletion of one resource usually results in depletion of the other, propagating adverse effects within the watershed. An understanding of the interconnections between surface water and ground water is therefore essential. This understanding is still incomplete, but receiving growing attention from the research community. Exchanges between streams and shallow ground-water systems play a key role in controlling temperatures not only in streams, but also in their underlying sediments. As a result, analyses of subsurface temperature patterns provide information about surface-water/ground-water interactions. Chemical tracers are commonly used for tracing flow between streams and ground water. Introduction of chemical tracers in near-stream environments is, however, limited by real and perceived issues regarding introduced contamination and practical constraints. As an alternative, naturally occurring variations in temperature can be used to track (or trace) the heat carried by flowing water. The hydraulic transport of heat enables its use as a tracer. Differences between temperatures in the stream and surrounding sediments are now being analyzed to trace the movement of ground water to and from streams. As shown in the subsequent chapters of this circular, tracing the transport of heat leads to a better understanding of the magnitudes and mechanisms of stream/ground-water exchanges, and helps quantify the resulting effects on stream and streambed temperatures. Chapter 1 describes the general principals and procedures by which the natural transport of heat can be utilized to infer the movement of subsurface water near streams. This information sets the foundation for understanding the advanced applications in chapters 2 through 8. Each of these chapters provides a case study, using heat tracing as a tool, of interactions between surface water and ground water for a different location in the western United States. Technical details of the use of heat as an environmental tracer appear in appendices.

Circular↗

Conceptualization of the predevelopment groundwater flow system and transient water-level responses in Yucca Flat, Nevada National Security Site, Nevada

Contaminants introduced into the subsurface of Yucca Flat, Nevada National Security Site, by underground nuclear testing are of concern to the U.S. Department of Energy and regulators responsible for protecting human health and safety. The potential for contaminant movement away from the underground test areas and into the accessible environment is greatest by groundwater transport. The primary hydrologic control on this transport is evaluated and examined through a set of contour maps developed to represent the hydraulic-head distribution within the two major aquifer systems underlying the area. Aquifers and confining units within these systems were identified and their extents delineated by merging and analyzing hydrostratigraphic framework models developed by other investigators from existing geologic information. Maps of the hydraulic-head distributions in the major aquifer systems were developed from a detailed evaluation and assessment of available water-level measurements. The maps, in conjunction with regional and detailed hydrogeologic cross sections, were used to conceptualize flow within and between aquifer systems. Aquifers and confining units are mapped and discussed in general terms as being one of two aquifer systems: alluvial-volcanic or carbonate. The carbonate aquifers are subdivided and mapped as independent regional and local aquifers, based on the continuity of their component rock. Groundwater flow directions, approximated from potentiometric contours, are indicated on the maps and sections and discussed for the alluvial-volcanic and regional carbonate aquifers. Flow in the alluvial-volcanic aquifer generally is constrained by the bounding volcanic confining unit, whereas flow in the regional carbonate aquifer is constrained by the siliceous confining unit. Hydraulic heads in the alluvial-volcanic aquifer typically range from 2,400 to 2,530 feet and commonly are elevated about 20-100 feet above heads in the underlying regional carbonate aquifer. Flow directions in the alluvial-volcanic aquifer are variable and are controlled by localized areas where small amounts of water can drain into the regional carbonate aquifer. These areas commonly are controlled by geologic structures, such as Yucca fault. Flow in the regional carbonate aquifer generally drains to the center of the basin; from there flow is to the south-southeast out of the study area toward downgradient discharge areas. Southward flow in the regional carbonate aquifer occurs in a prominent potentiometric trough that results from a faulted zone of enhanced permeability centered about Yucca fault. Vertical hydraulic gradients between the aquifer systems are downward throughout the study area; however, flow from the alluvial-volcanic aquifer into the underlying carbonate aquifer is believed to be minor because of the intervening confining unit. Transient water levels were identified and analyzed to understand hydraulic responses to stresses in Yucca Flat. Transient responses have only a minimal influence on the general predevelopment flow directions in the aquifers. The two primary anthropogenic stresses on the groundwater system since about 1950 are nuclear testing and pumping. Most of the potentiometric response in the aquifers to pumping or past nuclear testing is interim and localized. Persistent, long-lasting changes in hydraulic head caused by nuclear testing occur only in confining units where groundwater fluxes are negligible. A third stress on the groundwater system is natural recharge, which can cause minor, short- and long-term changes in water levels. Long-term hydrographs affected by natural recharge, grouped by similar trend, cluster in distinct areas of Yucca Flat and are controlled primarily by spatial differences in local recharge patterns.

Nevada↗

Spatial and temporal variations in silver contamination and toxicity in San Francisco Bay

Although San Francisco Bay has a "Golden Gate", it may be argued that it is the "Silver Estuary". For at one time the Bay was reported to have the highest levels of silver in its sediments and biota, along with the only accurately measured values of silver in solution, of any estuarine system. Since then others have argued that silver contamination is higher elsewhere (e.g., New York Bight, Florida Bay, Galveston Bay) in a peculiar form of pollution machismo, while silver contamination has measurably declined in sediments, biota, and surface waters of the Bay over the past two to three decades. Documentation of those systemic temporal declines has been possible because of long-term, ongoing monitoring programs, using rigorous trace metal clean sampling and analytical techniques, of the United States Geological Survey and San Francisco Bay Regional Monitoring Program that are summarized in this report. However, recent toxicity studies with macro-invertebrates in the Bay have indicated that silver may still be adversely affecting the health of the estuarine system, and other studies have indicated that silver concentrations in the Bay may be increasing due to new industrial inputs and/or the diagenetic remobilization of silver from historically contaminated sediments being re-exposed to overlying surface waters and benthos. Consequently, the Bay may not be ready to relinquish its title as the "Silver Estuary".

California↗

Urban growth in American cities : glimpses of U.S. urbanization

The Earth's surface is changing rapidly. Changes are local, regional, national, and even global in scope. Some changes have natural causes, such as earthquakes or drought. Other changes, such as urban expansion, agricultural intensification, resource extraction, and water resources development, are examples of human-induced change that have significant impact upon people, the economy, and resources. The consequences that result from these changes are often dramatic and widespread (Buchanan, Acevedo, and Zirbes, 2002) It is the role of the U.S. Geological Survey (USGS) to provide useful and relevant scientific information both to the agencies within the Department of the Interior and to the Nation in general. In an effort to comply with this task, USGS scientists are assessing the status of, and the trends in, the Nation's land surface. This assessment provides useful information for regional and national land use decisionmaking. This knowledge can be used to deal with issues of significance to the Nation, such as quality-of-life, ecology of urban environments, ecosystem health, ecological integrity, water quality and quantity concerns, resource availability, vulnerability to natural hazards, safeguards to human health, air and land quality, and accessibility to scientific information. Results of these assessments can also be analyzed to reveal rates and trends in land use change. Results from urban growth studies provide a firm foundation for continuing research that explores the consequences of human modification of the landscape. The USGS seeks to illustrate and explain the spatial history of urban growth and corresponding land use change. Scientists are studying urban environments from a regional perspective and a time scale of decades to measure the changes that have occurred in order to help understand the impact of anticipated changes in the future. Within this booklet are pairs of images of selected urbanized regions from across the Nation. These image pairs illustrate the transformation that these areas have undergone over two decades. Specifically, they depict changes in the extent of urban land. Each change pair is composed of one image from the 1970s and one image from the 1990s. Accompanying each image pair is a brief historical geography of factors that helped facilitate major changes that have occurred since the founding of the main city and the consequences and challenges of regional urban growth. The goal of this publication is to provide an illustration of urban change that is easily understood by a broad audience. The images used throughout this booklet were generated from land cover data developed by the USGS. The data sources include the Geographic Information Retrieval and Analysis System (GIRAS) for the 1970s images and the National Land Cover Dataset (NLCD) for the 1990s images. GIRAS digital maps are based on photointerpretations completed in the mid-1970s. The NLCD is a land cover dataset for the conterminous United States based on 1992 Landsat thematic mapper (TM) satellite imagery and supplemental data (fig. 1a and fig. 1b). The USGS distributes both of these land use and land cover digital datasets. The images were developed by using a geographic information system (GIS). The GIRAS and NLCD datasets were used to identify urban land within each region. In the final images all urban areas are shown in red. A shaded-relief map of each region was used to display the topographic context of the red polygon coverage. For all of these images, urban land is defined as areas transformed into a built-up environment for human use. It includes residential areas, commercial and industrial developments, transportation features, and institutions.

Circular↗

Occurrence of antibiotic resistance and characterization of resistant genes and integrons in Enterobacteriaceae isolated from integrated fish farms south China

Antibiotics are still widely applied in animal husbandry to prevent diseases and used as feed additives to promote animal growth. This could result in antibiotic resistance to bacteria and antibiotic residues in animals. In this paper, Enterobacteriaceae isolated from four integrated fish farms in Zhongshan, South China were tested for antibiotic resistance, tetracycline resistance genes, sulfonamide resistance genes, and class 1 integrons. The Kirby-Bauer disk diffusion method and polymerase chain reaction (PCR) assays were carried out to test antibiotic susceptibility and resistance genes, respectively. Relatively high antibiotic resistance frequencies were found, especially for ampicillin (80%), tetracycline (52%), and trimethoprim (50%). Out of 203 Enterobacteriaceae isolates, 98.5% were resistant to one or more antibiotics tested. Multiple antibiotic resistance (MAR) was found highest in animal manures with a MAR index of 0.56. Tetracycline resistance genes ( tet (A), tet (C)) and sulfonamide resistance genes ( sul2 ) were detected in more than 50% of the isolates. The intI1 gene was found in 170 isolates (83.7%). Both classic and non-classic class 1 integrons were found. Four genes, aadA5 , aadA22 , dfr2 , and dfrA17 , were detected. To our knowledge, this is the first report for molecular characterization of antibiotic resistance genes in Enterobacteriaceae isolated from integrated fish farms in China and the first time that gene cassette array dfrA17-aadA5 has been detected in such fish farms. Results of this study indicated that fish farms may be a reservoir of highly diverse and abundant antibiotic resistant genes and gene cassettes. Integrons may play a key role in multiple antibiotic resistances posing potential health risks to the general public and aquaculture.

Zhongshan↗

Coelomic disorders of fishes

Dropsy is a commonly applied term for coelomic distention due to ascites, or the effusion and collection of fluid freely throughout the coelomic cavity. Dropsy, or ascites, is generally a sign of another ongoing disease process, oftentimes one that is multisystemic and impacting coelomic organs and tissues. Dropsy may be caused by a variety of potential etiological agents, both infectious and noninfectious. Stressors such as rapid change in water temperature may predispose fish to bacterial diseases associated with dropsy. Clinically affected fish display coelomic distension of varying degrees of severity. Generally considered a disease syndrome similar to dropsy, affecting specifically Malawi cichlids, a popular group of ornamental fish among aquarium hobbyists. Water belly occurs among salt water pen-reared salmonid fish, including Atlantic salmon, Chinook salmon and rainbow trout. Dietary changes such as reduction of the feeding rate have been reported to improve the condition among affected fish.

Book chapter↗

Ecosystem health in mineralized terrane — Data from podiform chromite (Chinese Camp mining district, California), quartz alunite (Castle Peak and Masonic mining districts, Nevada/California), and Mo/Cu porphyry (Battle Mountain mining district, Nevada) deposits

The myriad definitions of soil/ecosystem quality or health are often driven by ecosystem and management concerns, and they typically focus on the ability of the soil to provide functions relating to biological productivity and/or environmental quality. A variety of attempts have been made to create indices that quantify the complexities of soil quality and provide a means of evaluating the impact of various natural and anthropogenic disturbances. Though not without their limitations, indices can improve our understanding of the controls behind ecosystem processes and allow for the distillation of information to help link scientific and management communities. In terrestrial systems, indices were initially developed and modified for agroecosystems; however, the number of studies implementing such indices in nonagricultural systems is growing. Soil quality indices (SQIs) are typically composed of biological (and sometimes physical and chemical) parameters that attempt to reduce the complexity of a system into a metric of a soil’s ability to carry out one or more functions. The indicators utilized in SQIs can be as varied as the studies themselves, reflecting the complexity of the soil and ecosystems in which they function. Regardless, effective soil quality indicators should correlate well with soil or ecosystem processes, integrate those properties and processes, and be relevant to management practices. Commonly applied biological indicators include measures associated with soil microbial activity or function (for example, carbon and nitrogen mineralization, respiration, microbial biomass, enzyme activity. Cost, accessibility, ease of interpretation, and presence of existing data often dictate indicator selection given the number of available measures. We employed a large number of soil biological, chemical, and physical measures, along with measures of vegetation cover, density, and productivity, in order to test the utility and sensitivity of these measures within various mineralized terranes. We were also interested in examining these relations in the context of determining appropriate reference conditions with which to compare reclamation efforts. The purpose of this report is to present the data used to develop indices of soil and ecosystem quality associated with mineralized terranes (areas enriched in metal-bearing minerals), specifically podiform chromite, quartz alunite, and Mo/Cu porphyry systems. Within each of these mineralized terranes, a nearby unmineralized counterpart was chosen for comparison. The data consist of soil biological, chemical, and physical parameters, along with vegetation measurements for each of the sites described below. Synthesis of these data and index development will be the subject of future publications.

California↗